Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,057,759 |
+C |
coding (1773/1776 nt) |
yihK → |
putative GTP‑binding factor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,057,758 | 1 | . | C | 99.5%
| 696.2
/ ‑4.1
| 211 | coding (1772/1776 nt) | yihK | putative GTP‑binding factor |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base C (120/90); total (120/91) |
| Fisher's exact test for biased strand distribution p-value = 4.31e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 243 total aligned reads displayed.
TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CA‑CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATG > NC_000913/4057666‑4057845
|
tATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑Ca > 2:1979873/1‑93 (MQ=255)
tATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑Ca > 1:2160901/1‑93 (MQ=255)
aTCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTTGTAAACGT‑CA‑c < 2:4620016/93‑1 (MQ=255)
aTCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CA‑c > 1:1181030/1‑93 (MQ=255)
aTCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CA‑c > 1:1802712/1‑93 (MQ=255)
tCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CA‑cc < 2:109603/93‑2 (MQ=255)
tCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CA‑cc > 1:4550327/1‑92 (MQ=255)
tCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CA‑cc > 2:4706196/1‑92 (MQ=255)
ccGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CA‑cct > 2:60871/1‑91 (MQ=255)
cGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CA‑cctg < 2:1322909/93‑4 (MQ=255)
cGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CA‑cctg > 2:3952805/1‑90 (MQ=255)
aTGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACg > 2:2259977/1‑93 (MQ=255)
tGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACgg > 2:4003940/1‑93 (MQ=255)
tctGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGaaaa > 1:3071864/1‑93 (MQ=255)
tctGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGaaaa > 2:135391/1‑93 (MQ=255)
ctGGAACAAGCTCTGGAGTTCATCGATGATGACGAACGGGTAGAAGTGACTCCGACCTCTATCCGTATGCGTAAACGT‑CACCTGACGGAAAAc < 2:3270606/93‑1 (MQ=255)
gAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGAt < 2:4729608/93‑1 (MQ=255)
gAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGAt < 2:1904078/93‑1 (MQ=255)
gAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGAt > 1:414182/1‑93 (MQ=255)
aaCAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGAtc > 2:4656021/1‑93 (MQ=255)
aaCAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGAtc < 1:1862653/93‑1 (MQ=255)
aaCAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGAtc < 1:3714057/93‑1 (MQ=255)
aaGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGAtcgtc < 1:1009744/93‑1 (MQ=255)
aaGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGAtcgtc > 2:2804256/1‑93 (MQ=255)
aaGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGAtcgtc < 2:3267241/93‑1 (MQ=255)
tctGGTGGTCATCGATGATGACGAACCGGTAGAAGTGACGCCGACCTCTATCCGTAAGCGCAAACGC‑CACCTGACGGAAAACGAGCGAcgccg > 2:4206800/1‑93 (MQ=255)
ggAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCgcgc < 2:2503967/93‑1 (MQ=255)
ggAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCgcgc < 2:1377944/93‑1 (MQ=255)
gTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCaa > 1:4487436/1‑93 (MQ=255)
ttCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAAc > 1:2975886/1‑93 (MQ=255)
cATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACcg > 1:773163/1‑93 (MQ=255)
aTCGATGATGACGAACTGGTAGAAGCGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGACGCCGCGCCAACcgc > 1:2477854/1‑93 (MQ=255)
tCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACcgcg > 1:1263791/1‑93 (MQ=255)
gatgatGACTACCTGCTAGACGTCACTCCGCCCTCTATCCGTATCCGTAAACGTCCC‑CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCa < 2:257854/93‑1 (MQ=255)
gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCa > 1:2228323/1‑93 (MQ=255)
gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCa < 2:1148371/93‑1 (MQ=255)
gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCa < 2:2189832/93‑1 (MQ=255)
atgatgACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCAc < 1:4536983/93‑1 (MQ=255)
tgatgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCAcc < 2:4462287/93‑1 (MQ=255)
tgatgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCAcc > 2:4185736/1‑93 (MQ=255)
atgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGa > 2:3672841/1‑93 (MQ=255)
gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGaaa > 1:2853954/1‑93 (MQ=255)
aaCTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACg > 1:665105/1‑93 (MQ=255)
aaCTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACg < 2:883811/93‑1 (MQ=255)
aCTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGa < 1:1140558/93‑1 (MQ=255)
aCTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGa < 1:3152260/93‑1 (MQ=255)
cTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAGCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGAt < 2:3648005/93‑1 (MQ=255)
cTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGAt < 1:3964142/93‑1 (MQ=255)
ggTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTa > 1:1625624/1‑93 (MQ=255)
gTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTaa > 2:1207680/1‑93 (MQ=255)
tAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGAGCACCGAAAGACGATTAAt > 1:4617718/1‑93 (MQ=255)
aGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAtt > 1:4387081/1‑93 (MQ=255)
aGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAtt < 1:2000895/93‑1 (MQ=255)
gAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAttt < 1:823348/93‑1 (MQ=255)
aaGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTc < 1:681679/93‑1 (MQ=255)
aaGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTc < 2:2179014/93‑1 (MQ=255)
aCTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGtttt > 2:936177/1‑93 (MQ=255)
aCTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGtttt < 1:1561506/93‑1 (MQ=255)
cTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGttttt > 1:1358294/1‑93 (MQ=255)
cTCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGttttt < 1:2063302/93‑1 (MQ=255)
tCCGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGtttttt < 2:4293255/93‑1 (MQ=255)
cGACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAg < 2:4050739/93‑1 (MQ=255)
gACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGt > 1:3794071/1‑93 (MQ=255)
gACCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGt > 2:3784558/1‑93 (MQ=255)
aCCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTc < 1:4316944/93‑1 (MQ=255)
aCCTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTc > 2:3339314/1‑93 (MQ=255)
ccTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCa > 2:158259/1‑93 (MQ=255)
ccTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCa < 2:3714626/93‑1 (MQ=255)
ccTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCa < 1:3352041/93‑1 (MQ=255)
ccTCTATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCa < 2:3118190/93‑1 (MQ=255)
ctctATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCGCCGAAAGACGATTAATTTCGTTTTTTAGTCAt > 1:881763/1‑93 (MQ=255)
ctctATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAt < 2:2779414/93‑1 (MQ=255)
ctctATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAt < 2:3487056/93‑1 (MQ=255)
tctATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATa > 2:2659733/1‑93 (MQ=255)
ctATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCGCCGAAAGACGATTAATTTCGTTTTTTAGTCATaa > 1:3561338/1‑93 (MQ=255)
tATCCGTATTCGTAAAGGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaa > 2:4507563/1‑93 (MQ=255)
tATCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaa > 2:1613370/1‑93 (MQ=255)
aTCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaca > 1:4054704/1‑91 (MQ=255)
aTCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaaa < 1:2362576/93‑1 (MQ=255)
aTCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaaa < 1:3309010/93‑1 (MQ=255)
aTCCGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaaa < 2:1767689/93‑1 (MQ=255)
tCCTTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaaaa < 2:638819/93‑1 (MQ=255)
ccGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaaaaa < 2:1689624/93‑1 (MQ=255)
ccGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaaaaa < 2:4383399/93‑1 (MQ=255)
cGTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAc > 2:1860628/1‑93 (MQ=255)
cGTATGCGTAAACGT‑CACCTGGCGGAAAACGATCGTCGGCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAc < 2:3385097/93‑1 (MQ=255)
gTATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAcc > 1:3905847/1‑93 (MQ=255)
tATTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCt < 1:3399619/93‑1 (MQ=255)
aTTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTg > 1:2409698/1‑93 (MQ=255)
aTTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTg < 2:2109598/93‑1 (MQ=255)
aTTCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTg > 1:1244594/1‑93 (MQ=255)
ttCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACTATTAATTTCGTTTTTTAGTCATAAAAAACCTGc < 2:4553696/93‑1 (MQ=255)
ttCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGc < 2:3730667/93‑1 (MQ=255)
tCGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGcc < 2:356649/93‑1 (MQ=255)
cGTAAACGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCa > 1:2565122/1‑93 (MQ=255)
aaaCGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCg < 2:2341412/93‑1 (MQ=255)
aaaCGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCg < 1:1782153/93‑1 (MQ=255)
aCGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAt < 1:2196328/93‑1 (MQ=255)
aCGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAt > 2:1258597/1‑93 (MQ=255)
cGT‑CACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAACCCTGCCAGCGATg < 2:2489282/93‑1 (MQ=255)
|
TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGT‑CA‑CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATG > NC_000913/4057666‑4057845
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT > NC_000913/4057666‑4057852
|
TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑C > SRR4302544.1820323/1‑94 (MQ=60)
TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑C > SRR4302544.1192787/1‑94 (MQ=60)
TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑C > SRR4302544.4377156/1‑94 (MQ=60)
TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGCATTCGTAAACGTCA‑C > SRR4302544.3088536/1‑94 (MQ=60)
ATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑CC > SRR4302544.4595760/1‑94 (MQ=60)
CATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACG > SRR4302544.3207622/1‑94 (MQ=60)
ATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGG > SRR4302544.1869063/1‑94 (MQ=60)
CTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAA > SRR4302544.3101138/1‑94 (MQ=60)
CTGGAACAAGCTCTGGAGTTAATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACG > SRR4302544.1247636/1‑94 (MQ=60)
GGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAT > SRR4302544.418408/1‑94 (MQ=60)
AACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCG < SRR4302544.3751002/94‑1 (MQ=60)
AACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCG < SRR4302544.224524/94‑1 (MQ=60)
AACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCG < SRR4302544.1880651/94‑1 (MQ=60)
AAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCG < SRR4302544.2154692/94‑1 (MQ=60)
AAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCG > SRR4302544.2040511/1‑94 (MQ=60)
AAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCG < SRR4302544.1019799/94‑1 (MQ=60)
AAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGCCACCTGACGGAAAACGATCGTCG < SRR4302544.1214815/94‑1 (MQ=60)
AGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGGGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAACAGATCGTCGC > SRR4302544.3429866/1‑94 (MQ=60)
CTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCG > SRR4302544.2400319/1‑94 (MQ=60)
CTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCG > SRR4302544.458757/1‑94 (MQ=60)
CTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGACGCG > SRR4302544.685417/1‑94 (MQ=60)
GGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCC > SRR4302544.1769356/1‑94 (MQ=60)
GAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCA < SRR4302544.2207382/94‑1 (MQ=60)
AGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAA > SRR4302544.4532511/1‑94 (MQ=60)
GTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAAC > SRR4302544.3004432/1‑94 (MQ=60)
TCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCG > SRR4302544.780678/1‑94 (MQ=60)
CATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGC > SRR4302544.4143571/1‑94 (MQ=60)
CATCGATGATGACGAACTGGTAGAAGCGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGACGCCGCGCCAACCGC > SRR4302544.2501557/1‑94 (MQ=60)
ATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCG > SRR4302544.52184/1‑94 (MQ=60)
ATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCG < SRR4302544.2984154/94‑1 (MQ=60)
ATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCG > SRR4302544.1276226/1‑94 (MQ=60)
ATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCG > SRR4302544.55868/1‑94 (MQ=60)
TCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGC > SRR4302544.4539660/1‑94 (MQ=60)
CGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCA > SRR4302544.2249292/1‑94 (MQ=60)
CGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCA > SRR4302544.3983605/1‑94 (MQ=60)
ATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACC < SRR4302544.4582343/94‑1 (MQ=60)
TGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCG < SRR4302544.3959143/94‑1 (MQ=60)
GATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGA > SRR4302544.4452151/1‑94 (MQ=60)
TGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAA > SRR4302544.2881524/1‑94 (MQ=60)
ACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGA > SRR4302544.2498431/1‑94 (MQ=60)
GAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACG > SRR4302544.671673/1‑94 (MQ=60)
GAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACG < SRR4302544.2280567/94‑1 (MQ=60)
ACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGAT < SRR4302544.1151899/94‑1 (MQ=60)
ACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGAT < SRR4302544.3182242/94‑1 (MQ=60)
CTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATT > SRR4302544.973577/1‑94 (MQ=60)
CTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATT < SRR4302544.4003574/94‑1 (MQ=60)
CTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCAGCGCCAACCGCGCACCGAAAGACGATT > SRR4302544.973578/1‑94 (MQ=60)
TGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTA > SRR4302544.1641640/1‑94 (MQ=60)
TGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTA > SRR4302544.1641639/1‑94 (MQ=60)
GTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAT > SRR4302544.3386702/1‑94 (MQ=60)
GTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGAGCACCGAAAGACGATTAAT > SRR4302544.4663552/1‑94 (MQ=60)
TAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATT > SRR4302544.4431496/1‑94 (MQ=60)
AGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTT > SRR4302544.2615289/1‑94 (MQ=60)
AGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTT < SRR4302544.2020326/94‑1 (MQ=60)
AGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTT > SRR4302544.128234/1‑94 (MQ=60)
GAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTC < SRR4302544.831405/94‑1 (MQ=60)
GAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTC < SRR4302544.831406/94‑1 (MQ=60)
AAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCG < SRR4302544.688454/94‑1 (MQ=60)
GTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTT < SRR4302544.4098744/94‑1 (MQ=60)
TGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTT > SRR4302544.1263283/1‑94 (MQ=60)
GACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTT < SRR4302544.3771948/94‑1 (MQ=60)
ACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTT < SRR4302544.1577010/94‑1 (MQ=60)
ACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTT > SRR4302544.731514/1‑94 (MQ=60)
ACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTT > SRR4302544.1371775/1‑94 (MQ=60)
CTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTT < SRR4302544.2083138/94‑1 (MQ=60)
CTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTT > SRR4302544.4030752/1‑94 (MQ=60)
CCTACCGCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAG < SRR4302544.2904741/94‑1 (MQ=60)
CGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGT > SRR4302544.118883/1‑94 (MQ=60)
CGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGT > SRR4302544.3831634/1‑94 (MQ=60)
GACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTC > SRR4302544.4588952/1‑94 (MQ=60)
GACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCAAAAGACGATTAATTTCGTTTTTTAGTC > SRR4302544.2425298/1‑94 (MQ=60)
ACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCA < SRR4302544.4360918/94‑1 (MQ=60)
CCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCGCCGAAAGACGATTAATTTCGTTTTTTAGTCAT > SRR4302544.890500/1‑94 (MQ=60)
CCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAT < SRR4302544.3384030/94‑1 (MQ=60)
CTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATA < SRR4302544.3340841/94‑1 (MQ=60)
TCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCGCCGAAAGACGATTAATTTCGTTTTTTAGTCATAA > SRR4302544.3595479/1‑94 (MQ=60)
TCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAA < SRR4302544.1083561/94‑1 (MQ=60)
TCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAA > SRR4302544.709004/1‑94 (MQ=60)
TCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAA > SRR4302544.792580/1‑94 (MQ=60)
TCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAA > SRR4302544.146828/1‑94 (MQ=60)
TCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAA < SRR4302544.2514377/94‑1 (MQ=60)
CTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAA > SRR4302544.3855127/1‑94 (MQ=60)
CTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAA > SRR4302544.3297922/1‑94 (MQ=60)
TATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAACA > SRR4302544.4095085/1‑94 (MQ=60)
TATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAA > SRR4302544.3628212/1‑94 (MQ=60)
TATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAA > SRR4302544.164116/1‑94 (MQ=60)
TATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAA > SRR4302544.2064599/1‑94 (MQ=60)
ATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAA > SRR4302544.2191884/1‑94 (MQ=60)
ATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAA < SRR4302544.3340524/94‑1 (MQ=60)
ATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAA < SRR4302544.2384945/94‑1 (MQ=60)
ATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAA > SRR4302544.2548043/1‑94 (MQ=60)
CGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACC > SRR4302544.3944654/1‑94 (MQ=60)
GTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCT > SRR4302544.1972875/1‑94 (MQ=60)
GTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCT < SRR4302544.3150905/94‑1 (MQ=60)
GTATGCGTAAACGTCACCTGACGGAAAACGATCGTCGGCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCT < SRR4302544.4660320/94‑1 (MQ=60)
TATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTG > SRR4302544.2432595/1‑94 (MQ=60)
TATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTG < SRR4302544.3432124/94‑1 (MQ=60)
TATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTG > SRR4302544.4391540/1‑94 (MQ=60)
TATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTG > SRR4302544.1256863/1‑94 (MQ=60)
TCGTAAACGTGACCGGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCA < SRR4302544.3500153/94‑1 (MQ=60)
TCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCA > SRR4302544.2589766/1‑94 (MQ=60)
TCGTAAACGTCACCGGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCA < SRR4302544.3624435/94‑1 (MQ=60)
GTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGC > SRR4302544.133672/1‑94 (MQ=60)
TAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCG > SRR4302544.1816683/1‑94 (MQ=60)
AAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGA < SRR4302544.1799582/94‑1 (MQ=60)
AACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAT > SRR4302544.1858709/1‑94 (MQ=60)
ACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATG < SRR4302544.2217044/94‑1 (MQ=60)
cacCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAG < SRR4302544.1318927/91‑1 (MQ=60)
C‑CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGT > SRR4302544.3460531/1‑94 (MQ=60)
CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT > SRR4302544.3181725/1‑94 (MQ=60)
CTCACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGAAGATTAACTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGCTGGCAGGTT > SRR4302544.3181724/1‑94 (MQ=60)
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TATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCA‑CTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGGTT > NC_000913/4057666‑4057852
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
