Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,112,113 |
T→C |
intergenic (‑61/+36) |
fpr ← / ← glpX |
ferredoxin‑NADP reductase/GlpX |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,112,113 | 0 | T | C | 99.4%
| 557.2
/ ‑5.6
| 173 | intergenic (‑61/+36) | fpr/glpX | ferredoxin‑NADP reductase/GlpX |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (82/89); total (82/91) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
Only 100 of 179 total aligned reads displayed.
AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGA > NC_000913/4112023‑4112202
|
aGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGccc < 1:693650/93‑1 (MQ=255)
gTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGcccc > 1:1100885/1‑93 (MQ=255)
gTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGcccc < 2:277702/93‑1 (MQ=255)
aCTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGaa < 2:496093/93‑1 (MQ=255)
aCTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGaa < 1:2197213/93‑1 (MQ=255)
aCTTTGCCTGTTACCCAATCAGCCATGTTTTCCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGaa < 2:1527794/93‑1 (MQ=255)
cTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAg > 2:4657243/1‑93 (MQ=255)
cTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAg > 2:3668348/1‑93 (MQ=255)
tttGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAgg > 2:3856283/1‑93 (MQ=255)
tttGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAgg > 2:2542558/1‑93 (MQ=255)
gCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACt < 1:88618/93‑1 (MQ=255)
gCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACt < 1:1604088/93‑1 (MQ=255)
gTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGaa < 2:21901/93‑1 (MQ=255)
gTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGaa > 2:1762092/1‑93 (MQ=255)
ttACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAg > 2:4216415/1‑93 (MQ=255)
ttACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAg > 1:3215159/1‑93 (MQ=255)
aCCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGc > 1:1822066/1‑93 (MQ=255)
cccAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGCAGGACTGGAAGGCt > 2:1620980/1‑93 (MQ=255)
cccAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCt < 1:382922/93‑1 (MQ=255)
cccAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCt > 1:2450054/1‑93 (MQ=255)
cccAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCt < 2:3692476/93‑1 (MQ=255)
cccAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCt > 1:1783764/1‑93 (MQ=255)
cAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCa < 1:58530/93‑1 (MQ=255)
aaTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCaa < 2:4581848/93‑1 (MQ=255)
aaTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCaa < 2:3529174/93‑1 (MQ=255)
aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGGAGGCTCAAt > 2:5486/1‑93 (MQ=255)
aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAt < 1:4701434/93‑1 (MQ=255)
gCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGat > 2:1110761/1‑93 (MQ=255)
ccATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatc < 2:1816843/93‑1 (MQ=255)
ccATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatc < 2:2787519/93‑1 (MQ=255)
ccATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatc > 2:3949377/1‑93 (MQ=255)
ccATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATGCCAGCCCCGAAGGACTGGAAGGCTCAATCGatc < 1:502573/93‑1 (MQ=255)
cATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGACGGACTGGAAGGCTCAATCGatca > 1:372353/1‑93 (MQ=255)
tGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaa > 2:3218490/1‑93 (MQ=255)
gTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaat < 1:2685393/93‑1 (MQ=255)
gTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaac > 1:2057081/1‑92 (MQ=255)
tttttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTTTCCGAACAAAAAAATTCCAGACCCGAAGGACTGGAAGGCTCAATCGatcaaatc < 1:1516541/93‑1 (MQ=255)
tttttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaatc < 2:4027202/93‑1 (MQ=255)
tttttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaatc > 2:3796327/1‑93 (MQ=255)
tttttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaagc > 2:4086065/1‑91 (MQ=255)
tctcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAaatcaatc < 1:751423/93‑1 (MQ=255)
ctcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAatcaatca < 2:4130176/93‑1 (MQ=255)
ccTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCaga < 1:4441886/93‑1 (MQ=255)
ccTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCaga < 1:3097763/93‑1 (MQ=255)
cTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCagag > 2:1347565/1‑93 (MQ=255)
cTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCagag < 2:2282733/93‑1 (MQ=255)
ttttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCACGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAt < 1:1683538/93‑1 (MQ=255)
tttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAtg < 1:1187014/93‑1 (MQ=255)
gattgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGc < 1:3987296/93‑1 (MQ=255)
gattgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGc > 1:4247763/1‑93 (MQ=255)
ttgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAc < 1:2825578/93‑1 (MQ=255)
ttgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAc < 1:2825577/93‑1 (MQ=255)
tgaCTTTCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAcc < 1:1329421/93‑1 (MQ=255)
tgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAcc < 2:3343773/93‑1 (MQ=255)
gaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCt < 2:2270415/93‑1 (MQ=255)
aCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTg > 1:3018883/1‑93 (MQ=255)
ttGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCa > 1:3490292/1‑93 (MQ=255)
ttGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCa > 1:808921/1‑93 (MQ=255)
gCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAtt > 1:2476275/1‑93 (MQ=255)
gCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAtt > 1:1984229/1‑93 (MQ=255)
gCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAtt > 1:3850681/1‑93 (MQ=255)
ccTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGTTCAAATCAATCAGAGGATGTGCACCTGCAttc > 1:1404621/1‑92 (MQ=255)
ccTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAttt > 1:3596156/1‑93 (MQ=255)
cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTc < 2:422525/93‑1 (MQ=255)
ttATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTcc < 2:3825086/93‑1 (MQ=255)
aTCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGCAGGCCTGGAAGGCTCAATCGATAAAATAAATCAGAGGCGTTGCACCTGCTTTTcgtg > 1:3659106/1‑90 (MQ=255)
aTCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCACTCAGAGGATGTGCCCCTGCATTTCCgt > 1:3142023/1‑92 (MQ=255)
aTCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCgg > 1:3142021/1‑93 (MQ=255)
aTCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCgg < 2:4433180/93‑1 (MQ=255)
aTCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCgg < 2:3488230/93‑1 (MQ=255)
aTCTTCGTTCTCCGAACAAAAAAATTCCAGCACCGAAGGACTGGAGGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCgg < 2:3134658/93‑1 (MQ=255)
cTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGt > 2:537277/1‑93 (MQ=255)
ttCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTc > 1:2748065/1‑93 (MQ=255)
ttCGTTCTACGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTc < 2:69384/93‑1 (MQ=255)
tCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCt < 2:3314146/93‑1 (MQ=255)
cGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCtt < 2:660187/93‑1 (MQ=255)
cGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCtt < 2:4114764/93‑1 (MQ=255)
cGTCCTCCGACCAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCtt < 2:1852890/93‑1 (MQ=255)
gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttt > 1:3351671/1‑93 (MQ=255)
ttCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTg > 2:3251889/1‑93 (MQ=255)
tctcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGc < 2:3568700/93‑1 (MQ=255)
tcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGa > 2:46459/1‑93 (MQ=255)
tcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGa < 1:320190/93‑1 (MQ=255)
ccGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTATTTGCGAt > 1:924026/1‑93 (MQ=255)
cGAACAAAAAAATTCCAGCCCCGAAGGGCTGGAAGGATCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATc > 2:2504758/1‑93 (MQ=255)
cGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATc < 1:421010/93‑1 (MQ=255)
gAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATcc < 2:764568/93‑1 (MQ=255)
gAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATcc < 2:2682049/93‑1 (MQ=255)
aaCAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCa > 2:4134136/1‑93 (MQ=255)
aaaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAt > 1:4215241/1‑93 (MQ=255)
aaaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAt < 1:4023347/93‑1 (MQ=255)
aaaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGACCCAGAt > 1:3235562/1‑93 (MQ=255)
aaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATa > 1:4575464/1‑93 (MQ=255)
aaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAg < 2:1185125/93‑1 (MQ=255)
aaaaaTTCCAGCCACGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAg < 1:2978463/93‑1 (MQ=255)
aaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGt < 1:1001586/93‑1 (MQ=255)
aaTTCCAGCCCCGAAGGACTGGAAGGCTTAATGGATCAAATCAATCAGAGGATGTGCACCTGTATTTCCGGGTCTTTGCGATCCAGATAGtgg < 1:473983/93‑1 (MQ=255)
aaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtgg > 1:191185/1‑93 (MQ=255)
ttCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggat > 2:4542581/1‑93 (MQ=255)
tCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggatg < 1:2541996/93‑1 (MQ=255)
|
AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGA > NC_000913/4112023‑4112202
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGACT > NC_000913/4112020‑4112204
|
TTTAGTGGCTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGC < SRR4302544.3730087/94‑1 (MQ=60)
TTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGC < SRR4302544.3730085/94‑1 (MQ=60)
TTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGC < SRR4302544.2165897/94‑1 (MQ=60)
TTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCC > SRR4302544.4547927/1‑94 (MQ=60)
TTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCC < SRR4302544.1965603/94‑1 (MQ=60)
AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCC > SRR4302544.1111849/1‑94 (MQ=60)
AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCC < SRR4302544.700559/94‑1 (MQ=60)
ACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAG < SRR4302544.2217929/94‑1 (MQ=60)
TTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAC < SRR4302544.370728/94‑1 (MQ=60)
GCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTG < SRR4302544.1619902/94‑1 (MQ=60)
GCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTG < SRR4302544.89453/94‑1 (MQ=60)
CCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGACGGACTGG > SRR4302544.159081/1‑94 (MQ=60)
CCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGG > SRR4302544.4051324/1‑94 (MQ=60)
CTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGA > SRR4302544.763510/1‑94 (MQ=60)
GTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAG < SRR4302544.3232830/94‑1 (MQ=60)
GTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAG > SRR4302544.3245829/1‑94 (MQ=60)
TACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGC > SRR4302544.1839827/1‑94 (MQ=60)
ACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCT > SRR4302544.1801205/1‑94 (MQ=60)
ACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCT > SRR4302544.2473425/1‑94 (MQ=60)
CCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTC < SRR4302544.386820/94‑1 (MQ=60)
CCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCA > SRR4302544.1245062/1‑94 (MQ=60)
CAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAA > SRR4302544.545765/1‑94 (MQ=60)
CAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAA < SRR4302544.59124/94‑1 (MQ=60)
ATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATC > SRR4302544.1727428/1‑94 (MQ=60)
ATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATC < SRR4302544.4747903/94‑1 (MQ=60)
ACAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCG < SRR4302544.1697774/94‑1 (MQ=60)
AGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGAT > SRR4302544.4290131/1‑94 (MQ=60)
GCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATC > SRR4302544.4766144/1‑94 (MQ=60)
CCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGACGGACTGGAAGGCTCAATCGATCA > SRR4302544.376152/1‑94 (MQ=60)
CCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCA < SRR4302544.2234736/94‑1 (MQ=60)
CCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCA > SRR4302544.2593011/1‑94 (MQ=60)
CCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCA < SRR4302544.1408380/94‑1 (MQ=60)
CCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATGCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCA < SRR4302544.507519/94‑1 (MQ=60)
TGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAAT > SRR4302544.3657437/1‑94 (MQ=60)
TGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAAT < SRR4302544.3576113/94‑1 (MQ=60)
TGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAAC > SRR4302544.2076871/1‑94 (MQ=60)
GTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATC < SRR4302544.2711129/94‑1 (MQ=60)
TTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTTTCCGAACAAAAAAATTCCAGACCCGAAGGACTGGAAGGCTCAATCGATCAAATCA < SRR4302544.1531587/94‑1 (MQ=60)
TTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAAT < SRR4302544.909150/94‑1 (MQ=60)
TTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAAT > SRR4302544.3867408/1‑94 (MQ=60)
TCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCA < SRR4302544.758761/94‑1 (MQ=60)
CTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAG > SRR4302544.3991410/1‑94 (MQ=60)
CCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAG < SRR4302544.4459099/94‑1 (MQ=60)
CCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAG < SRR4302544.4486664/94‑1 (MQ=60)
CCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAG < SRR4302544.3127262/94‑1 (MQ=60)
TGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGA < SRR4302544.3201149/94‑1 (MQ=60)
TGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGA < SRR4302544.2780387/94‑1 (MQ=60)
GTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT < SRR4302544.41603/94‑1 (MQ=60)
GTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAT < SRR4302544.662387/94‑1 (MQ=60)
TTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCACGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATG < SRR4302544.1700124/94‑1 (MQ=60)
TTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGT < SRR4302544.1198805/94‑1 (MQ=60)
TGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGC > SRR4302544.4291068/1‑94 (MQ=60)
TGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGC > SRR4302544.326321/1‑94 (MQ=60)
GATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCA < SRR4302544.4026990/94‑1 (MQ=60)
TTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACC < SRR4302544.2852881/94‑1 (MQ=60)
TTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACC < SRR4302544.2852880/94‑1 (MQ=60)
TGACTTTCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCT < SRR4302544.1342498/94‑1 (MQ=60)
TGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCT > SRR4302544.307318/1‑94 (MQ=60)
GACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTG > SRR4302544.3047820/1‑94 (MQ=60)
CTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCA > SRR4302544.3523564/1‑94 (MQ=60)
CTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCA > SRR4302544.816810/1‑94 (MQ=60)
TGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATT < SRR4302544.870527/94‑1 (MQ=60)
TGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATT > SRR4302544.3888904/1‑94 (MQ=60)
TGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATT > SRR4302544.2499958/1‑94 (MQ=60)
TGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATT > SRR4302544.2003495/1‑94 (MQ=60)
GCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGTTCAAATCAATCAGAGGATGTGCACCTGCATTC > SRR4302544.1418610/1‑94 (MQ=60)
GCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTT > SRR4302544.3630755/1‑94 (MQ=60)
TTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCG < SRR4302544.1822793/94‑1 (MQ=60)
TATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGCAGGCCTGGAAGGCTCAATCGATAAAATAAATCAGAGGcgttgcacctgcttttcgtg > SRR4302544.3695613/1‑74 (MQ=60)
TATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCACTCAGAGGATGTGCCCCTGCATTTCCGT > SRR4302544.3171893/1‑94 (MQ=60)
TATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGG < SRR4302544.2041473/94‑1 (MQ=60)
TATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGG > SRR4302544.3029634/1‑94 (MQ=60)
TATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGG > SRR4302544.3171892/1‑94 (MQ=60)
TATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGG > SRR4302544.3171891/1‑94 (MQ=60)
CTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTC > SRR4302544.2774537/1‑94 (MQ=60)
CGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTT > SRR4302544.3383654/1‑94 (MQ=60)
TCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCG < SRR4302544.2995027/94‑1 (MQ=60)
TCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGCCTTTGCG > SRR4302544.113805/1‑94 (MQ=60)
CTCCGAACAAAAAAATTGCAGCCCCGAAGGAATGGAAGGCTCAATCGATCGAATCAATCATAGGAGGTGCNCNTTCATTTCCGGGTCTTTGCGA > SRR4302544.2408767/1‑94 (MQ=60)
TCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGAT < SRR4302544.323514/94‑1 (MQ=60)
TCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTATTTGCGAT > SRR4302544.933138/1‑94 (MQ=60)
CGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCC < SRR4302544.425311/94‑1 (MQ=60)
CGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCC > SRR4302544.2772038/1‑94 (MQ=60)
CGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCC > SRR4302544.2565049/1‑94 (MQ=60)
AACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAG < SRR4302544.1931486/94‑1 (MQ=60)
AACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAG < SRR4302544.493475/94‑1 (MQ=60)
CAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAT > SRR4302544.4257789/1‑94 (MQ=60)
CAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAT > SRR4302544.449335/1‑94 (MQ=60)
CAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGACCCAGAT > SRR4302544.3266535/1‑94 (MQ=60)
AAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATA > SRR4302544.4621055/1‑94 (MQ=60)
AAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATA < SRR4302544.4063413/94‑1 (MQ=60)
AAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAG < SRR4302544.3423488/94‑1 (MQ=60)
AAAAATTCCAGCCACGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGT < SRR4302544.3007028/94‑1 (MQ=60)
AAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTG < SRR4302544.1011517/94‑1 (MQ=60)
AAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCAGGGTCTTTGCGATCCAGATAGTG < SRR4302544.211826/94‑1 (MQ=60)
AAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGG > SRR4302544.193100/1‑94 (MQ=60)
AATTCCAGCCCCGAAGGACTGGAAGGCTTAATGGATCAAATCAATCAGAGGATGTGCACCTGTATTTCCGGGTCTTTGCGATCCAGATAGTGGA < SRR4302544.478618/94‑1 (MQ=60)
TTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATG > SRR4302544.1000132/1‑94 (MQ=60)
TCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGG < SRR4302544.2566400/94‑1 (MQ=60)
AGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGACT < SRR4302544.266421/94‑1 (MQ=60)
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TTTAGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGACT > NC_000913/4112020‑4112204
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
