Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,120,575 |
T→C |
T115T (ACA→ACG) |
ftsN ← |
essential cell division protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,120,575 | 0 | T | C | 96.1%
| 463.3
/ 4.8
| 154 | T115T (ACA→ACG) | ftsN | essential cell division protein |
| Reads supporting (aligned to +/- strand): ref base T (2/4); new base C (61/87); total (63/91) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 |
Only 100 of 162 total aligned reads displayed.
CGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAAT > NC_000913/4120485‑4120664
|
cGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGgcgt < 2:2972616/93‑1 (MQ=255)
gTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTc > 1:2835936/1‑93 (MQ=255)
tCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCa < 2:4589949/93‑1 (MQ=255)
tGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGt > 2:1990601/1‑93 (MQ=255)
tGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGt < 1:1548206/93‑1 (MQ=255)
tGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGt < 2:4743029/93‑1 (MQ=255)
tGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGt > 2:4173730/1‑93 (MQ=255)
tGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGt < 1:2118441/93‑1 (MQ=255)
gTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGtt < 2:596083/93‑1 (MQ=255)
gTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGtt < 2:3675433/93‑1 (MQ=255)
gTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGtt < 1:1938489/93‑1 (MQ=255)
ttCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTg < 1:3572175/93‑1 (MQ=255)
tCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGc < 2:3880834/93‑1 (MQ=255)
tCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGc > 1:2542428/1‑93 (MQ=255)
cATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCt < 1:4387456/93‑1 (MQ=255)
aTTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTc < 2:1246480/93‑1 (MQ=255)
ttCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTcc < 2:4472440/93‑1 (MQ=255)
tCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCg < 1:1185866/93‑1 (MQ=255)
ccACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCACATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGATCTGGCGTCAGCTGCTCCgg > 2:4676923/1‑93 (MQ=255)
cACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCggg < 1:3693500/93‑2 (MQ=255)
cACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGc > 1:151618/1‑93 (MQ=255)
cACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGc < 1:3653090/93‑1 (MQ=255)
aCGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCg > 2:875653/1‑93 (MQ=255)
cGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGt < 1:4602011/93‑1 (MQ=255)
cGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGt > 1:3415511/1‑93 (MQ=255)
ggAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGtt > 2:3432917/1‑93 (MQ=255)
gAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGttt > 1:1227294/1‑93 (MQ=255)
gAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGCTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGttt > 2:4204474/1‑93 (MQ=255)
cTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttca > 1:850024/1‑93 (MQ=255)
tCAACAAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcact > 2:727602/1‑93 (MQ=255)
aCCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcacttca > 1:3528499/1‑93 (MQ=255)
ccAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcacttcac > 1:2186612/1‑93 (MQ=255)
aGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTcacca > 2:2471804/1‑93 (MQ=255)
aGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTcacca > 2:134753/1‑93 (MQ=255)
aGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTcacca < 2:2796306/93‑1 (MQ=255)
gCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTcaccac > 1:1286217/1‑93 (MQ=255)
gCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCgg > 2:1396761/1‑93 (MQ=255)
gTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAAAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCa < 2:3796450/93‑1 (MQ=255)
ttGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAg > 2:2455554/1‑93 (MQ=255)
tGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGa > 1:464706/1‑93 (MQ=255)
ggCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACTGGCAGaa > 1:4429570/1‑93 (MQ=255)
ggCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGaa < 1:2303764/93‑1 (MQ=255)
gctgctGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAg < 2:67274/93‑1 (MQ=255)
gctgctGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAg < 2:208857/93‑1 (MQ=255)
tgctgGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGt < 1:1777889/93‑1 (MQ=255)
tgctgGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGt < 2:794834/93‑1 (MQ=255)
gctgGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGtt > 2:3061013/1‑93 (MQ=255)
gctgGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGtt > 2:3060871/1‑93 (MQ=255)
gctgGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGtt > 1:313306/1‑93 (MQ=255)
ctgGCGGATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTc < 1:2966936/93‑1 (MQ=255)
ctgGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTc < 1:2149404/93‑1 (MQ=255)
tgGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCt > 2:2553922/1‑93 (MQ=255)
tgGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCt < 2:84172/93‑1 (MQ=255)
ggCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCtg > 1:2090384/1‑93 (MQ=255)
gcgcATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCtgt < 2:944789/93‑1 (MQ=255)
gcgcATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCtgt < 2:3298040/93‑1 (MQ=255)
gcgcATATCAGCCTGCATTTGTTCAAGAAGCTGACGTGGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCtgt < 1:3350979/93‑1 (MQ=255)
cgcATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCtgtg < 2:2225974/93‑1 (MQ=255)
atatCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTTTGGCGTCAGTTGCTCCGGCGGTTTTTCTTCACCCCCCGCACAAGGGTCTGTgggg > 2:2555043/1‑92 (MQ=255)
atatCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgc > 1:2604655/1‑93 (MQ=255)
atatCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgc < 1:628421/93‑1 (MQ=255)
atatCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgc < 1:927587/93‑1 (MQ=255)
tatCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgcg > 2:4294226/1‑93 (MQ=255)
tCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGcgca < 1:4686895/93‑1 (MQ=255)
cAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGcgcac < 1:3279622/93‑1 (MQ=255)
gCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGcgcacgc > 1:3724676/1‑93 (MQ=255)
ccTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGcgcacgca < 1:1582514/93‑1 (MQ=255)
cTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCgcacgcac > 2:1874335/1‑93 (MQ=255)
cTGCATTTGTTCAAGAAGCTGACGTTGTCCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCgcccgcac < 1:2569528/93‑1 (MQ=255)
tGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACt > 2:2394907/1‑93 (MQ=255)
tGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACt > 1:1813082/1‑93 (MQ=255)
gCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTc < 2:3996191/93‑1 (MQ=255)
cATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTcc > 2:2666633/1‑93 (MQ=255)
aTTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTccc > 2:111844/1‑93 (MQ=255)
aTTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTccc < 2:3479879/93‑1 (MQ=255)
aTTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTccc < 2:3502542/93‑1 (MQ=255)
aTTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTccc > 2:1186182/1‑93 (MQ=255)
aTTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTccc < 2:4480165/93‑1 (MQ=255)
ttGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCgg < 1:1573677/93‑1 (MQ=255)
ttGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGGTCTGTGGGCGCACGCACTcccac > 2:3249624/1‑91 (MQ=255)
tGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGc > 2:1994831/1‑93 (MQ=255)
tGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGc < 1:4529802/93‑1 (MQ=255)
gTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCt < 1:2760769/93‑1 (MQ=255)
gTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCt > 1:2988749/1‑93 (MQ=255)
gTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCt < 1:2835535/93‑1 (MQ=255)
gTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCt < 2:586845/93‑1 (MQ=255)
ttCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTg > 1:3966710/1‑93 (MQ=255)
ttCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTg < 2:1499190/93‑1 (MQ=255)
tCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTgg < 2:574205/93‑1 (MQ=255)
cAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGc > 1:2523545/1‑93 (MQ=255)
gaagCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGAc < 2:3783439/93‑1 (MQ=255)
agCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACtt > 2:2165431/1‑93 (MQ=255)
cTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTc > 2:4021806/1‑93 (MQ=255)
cTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTc > 1:551300/1‑93 (MQ=255)
gACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCa < 1:4303476/93‑1 (MQ=255)
ttgttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGctc < 1:2230655/93‑1 (MQ=255)
ttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCttt < 1:4088216/93‑1 (MQ=255)
ttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCttt < 2:4320907/93‑1 (MQ=255)
ttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCttt < 2:4320906/93‑1 (MQ=255)
tGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAAt < 1:4678192/93‑1 (MQ=255)
|
CGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAAT > NC_000913/4120485‑4120664
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAG > NC_000913/4120483‑4120668
|
GGCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCG < SRR4302544.346456/94‑1 (MQ=60)
GGCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCG < SRR4302544.4681057/94‑1 (MQ=60)
GGCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCG < SRR4302544.1976241/94‑1 (MQ=60)
CGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTC > SRR4302544.2863330/1‑94 (MQ=60)
GTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCA > SRR4302544.2277490/1‑94 (MQ=60)
CTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGT < SRR4302544.4697163/94‑1 (MQ=60)
TGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTT < SRR4302544.2138782/94‑1 (MQ=60)
TGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTT < SRR4302544.1563627/94‑1 (MQ=60)
GTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTG < SRR4302544.1957254/94‑1 (MQ=60)
TTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGC > SRR4302544.2566836/1‑94 (MQ=60)
TTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGC < SRR4302544.3606430/94‑1 (MQ=60)
TCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCT < SRR4302544.3731619/94‑1 (MQ=60)
TCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCT < SRR4302544.4768244/94‑1 (MQ=60)
CATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTC > SRR4302544.1767362/1‑94 (MQ=60)
CATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTC < SRR4302544.4431874/94‑1 (MQ=60)
TTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCG > SRR4302544.3623541/1‑94 (MQ=60)
TCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGG < SRR4302544.1197654/94‑1 (MQ=60)
CCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGG > SRR4302544.1549429/1‑94 (MQ=60)
CCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGC > SRR4302544.153085/1‑94 (MQ=60)
CACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGGG < SRR4302544.3730297/94‑1 (MQ=60)
CACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCG < SRR4302544.3689539/94‑1 (MQ=60)
ACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGT > SRR4302544.3448154/1‑94 (MQ=60)
CGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTT < SRR4302544.4647756/94‑1 (MQ=60)
GGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTT > SRR4302544.1239438/1‑94 (MQ=60)
ACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCA > SRR4302544.858425/1‑94 (MQ=60)
TCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTT < SRR4302544.1913335/94‑1 (MQ=60)
AACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCA > SRR4302544.3562231/1‑94 (MQ=60)
ACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCAC > SRR4302544.2207286/1‑94 (MQ=60)
CCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGCCGTTTTCACTTCACC > SRR4302544.3075754/1‑94 (MQ=60)
AGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCAC > SRR4302544.1298885/1‑94 (MQ=60)
TTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGA > SRR4302544.469264/1‑94 (MQ=60)
TGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACTGGCAGAA > SRR4302544.4474266/1‑94 (MQ=60)
GGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAG < SRR4302544.2325529/94‑1 (MQ=60)
TGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTT < SRR4302544.1795282/94‑1 (MQ=60)
TGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTT > SRR4302544.316559/1‑94 (MQ=60)
GCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTC < SRR4302544.3860440/94‑1 (MQ=60)
CTGGCGGATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCT < SRR4302544.2995400/94‑1 (MQ=60)
CTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCT < SRR4302544.1583998/94‑1 (MQ=60)
CTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCT < SRR4302544.2169868/94‑1 (MQ=60)
TGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTG > SRR4302544.2110500/1‑94 (MQ=60)
GGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGT > SRR4302544.4446739/1‑94 (MQ=60)
GCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTG < SRR4302544.3382958/94‑1 (MQ=60)
GCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTGGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTG < SRR4302544.3382957/94‑1 (MQ=60)
CGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGG < SRR4302544.2676120/94‑1 (MQ=60)
CATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGC < SRR4302544.2171622/94‑1 (MQ=60)
CATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGC < SRR4302544.2558605/94‑1 (MQ=60)
CATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGC > SRR4302544.2629677/1‑94 (MQ=60)
ATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCG < SRR4302544.634605/94‑1 (MQ=60)
ATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCG < SRR4302544.936726/94‑1 (MQ=60)
ATATCAGCCTGCATTTGTTCAAGAAGCTGAAGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCG > SRR4302544.3236797/1‑94 (MQ=60)
TCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCAC < SRR4302544.4733219/94‑1 (MQ=60)
CAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACG < SRR4302544.3310876/94‑1 (MQ=60)
CAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACG < SRR4302544.1999296/94‑1 (MQ=60)
AGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGC > SRR4302544.3761720/1‑94 (MQ=60)
CCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCGCCACAGGCAGAAGGTTCTGTGGGCGCACGCAC > SRR4302544.732410/1‑94 (MQ=60)
CCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCAC < SRR4302544.1598152/94‑1 (MQ=60)
CTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACT > SRR4302544.1830789/1‑94 (MQ=60)
CTGCATTTGTTCAAGAAGCTGACGTTGTCCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCCCGCACT < SRR4302544.2594213/94‑1 (MQ=60)
ATTTGTTCAAGAAGCTTACGTTTTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCCCCACCGGCAGAAGGTTCTGTGGGCGCATGCACTCCCG < SRR4302544.907610/94‑1 (MQ=60)
TTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGC < SRR4302544.1589234/94‑1 (MQ=60)
TGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGTAGGTTCTGTGGGCGCACGCACTCCCGGCT < SRR4302544.4661939/94‑1 (MQ=60)
TGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCT > SRR4302544.3017414/1‑94 (MQ=60)
TGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCT < SRR4302544.4575122/94‑1 (MQ=60)
GTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTG > SRR4302544.4006168/1‑94 (MQ=60)
GTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTG < SRR4302544.2787331/94‑1 (MQ=60)
GTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTG < SRR4302544.2862927/94‑1 (MQ=60)
TCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGC > SRR4302544.2547793/1‑94 (MQ=60)
AAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGA < SRR4302544.2160782/94‑1 (MQ=60)
GCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTC > SRR4302544.556699/1‑94 (MQ=60)
GACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAG < SRR4302544.4347370/94‑1 (MQ=60)
GACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAG > SRR4302544.1296909/1‑94 (MQ=60)
TTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCT < SRR4302544.2251634/94‑1 (MQ=60)
TTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCT < SRR4302544.3568715/94‑1 (MQ=60)
TGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTT > SRR4302544.2929750/1‑94 (MQ=60)
GTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTT < SRR4302544.2794462/94‑1 (MQ=60)
TTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTA < SRR4302544.4128874/94‑1 (MQ=60)
TCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAA < SRR4302544.4550179/94‑1 (MQ=60)
CTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAAT < SRR4302544.2593670/94‑1 (MQ=60)
TGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATG < SRR4302544.4724441/94‑1 (MQ=60)
TGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATG < SRR4302544.4238396/94‑1 (MQ=60)
CGTCAGTTGCTCCGGCGTTTTCACTTCCCCGCCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAG < SRR4302544.296158/94‑1 (MQ=60)
CGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAG < SRR4302544.4161027/94‑1 (MQ=60)
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GGCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAG > NC_000913/4120483‑4120668
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
