Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,251,782 |
A→G |
V755A (GTG→GCG) |
plsB ← |
glycerol‑3‑phosphate acyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,251,782 | 0 | A | G | 98.4%
| 576.7
/ ‑2.6
| 187 | V755A (GTG→GCG) | plsB | glycerol‑3‑phosphate acyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (2/1); new base G (106/78); total (108/79) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.17e-01 |
Only 100 of 195 total aligned reads displayed.
TGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACACCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTTCTCCAGCGTACC > NC_000913/4251692‑4251870
|
aTAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAAcgccgc < 2:1841414/93‑1 (MQ=255)
aTAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAAcgccgc < 2:2333083/93‑1 (MQ=255)
aaaCGTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGTACTGAACGCCGCCt > 2:3028444/1‑93 (MQ=255)
aaaCCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCt < 2:3538240/93‑1 (MQ=255)
aaCCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCtt > 1:4124129/1‑93 (MQ=255)
aCCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTg < 2:4584646/93‑1 (MQ=255)
ccTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGt > 1:1121450/1‑93 (MQ=255)
ccTTCATCGTCTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGt < 2:2448666/93‑1 (MQ=255)
cTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTc < 1:428960/93‑1 (MQ=255)
cTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTc > 2:1766233/1‑93 (MQ=255)
cTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTc < 1:3016826/93‑1 (MQ=255)
cATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCgaa < 1:2709137/93‑1 (MQ=255)
cATCGGTTCGGCCGGTTCGTCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCgaa < 2:1894845/93‑1 (MQ=255)
tttCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACt > 2:2223922/1‑93 (MQ=255)
ttCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTc < 2:1280946/93‑1 (MQ=255)
ttCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTc > 1:3056661/1‑93 (MQ=255)
tGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCgg > 1:1497454/1‑93 (MQ=255)
tGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCgg > 1:1253277/1‑93 (MQ=255)
ccGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGgcg > 2:1010546/1‑93 (MQ=255)
ccGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGgcg < 1:1911763/93‑1 (MQ=255)
ggTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGcgcg > 1:590023/1‑93 (MQ=255)
ggTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGcgcg > 2:4003336/1‑93 (MQ=255)
ggCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGAt > 1:2042278/1‑93 (MQ=255)
ggCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGAt < 1:3536306/93‑1 (MQ=255)
ggCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGAt < 1:4027822/93‑1 (MQ=255)
aTCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGcc < 1:2073064/93‑1 (MQ=255)
aTCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGcc > 1:3430322/1‑93 (MQ=255)
aTCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGcc > 1:3203487/1‑93 (MQ=255)
aTCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGCTGATGcc > 1:187543/1‑93 (MQ=255)
tCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCg > 2:1967834/1‑93 (MQ=255)
tCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCg > 2:4648684/1‑93 (MQ=255)
tCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCg > 1:2940010/1‑93 (MQ=255)
tCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCg > 1:2515142/1‑93 (MQ=255)
cgccgcTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGt < 2:3820660/93‑1 (MQ=255)
gccgcTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTg > 1:3064242/1‑93 (MQ=255)
ccgcTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTgc < 2:2880969/93‑1 (MQ=255)
cgcTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTgca < 2:1956007/93‑1 (MQ=255)
cgcTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTgca > 1:4168704/1‑93 (MQ=255)
tATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTgcagca > 2:5389/1‑93 (MQ=255)
tCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACg < 1:3402505/93‑1 (MQ=255)
cTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGgag > 2:102111/1‑93 (MQ=255)
cTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGgag < 1:1709273/93‑1 (MQ=255)
gATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGgagag < 2:2096472/93‑1 (MQ=255)
atatACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGgagaga > 2:1183386/1‑93 (MQ=255)
atatACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGgagaga < 2:3568705/93‑1 (MQ=255)
atatACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGgagaga > 2:4686682/1‑93 (MQ=255)
atatACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGgagaga < 1:1210835/93‑1 (MQ=255)
atatACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACACCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGgagaga > 1:2156316/1‑93 (MQ=255)
tataCCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑c > 2:801795/1‑93 (MQ=255)
ataCCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑Cg > 1:1953994/1‑93 (MQ=255)
taCCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGt < 2:1597689/93‑1 (MQ=255)
aCCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATTCCGTGCAGCACGGAGAGA‑CGtt < 1:2803290/93‑1 (MQ=255)
aCCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGtt > 1:2959470/1‑93 (MQ=255)
ccTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTgc < 2:4376774/93‑1 (MQ=255)
cTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTgcg > 1:3748585/1‑93 (MQ=255)
ttCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTgcgg > 1:696455/1‑92 (MQ=255)
ttCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTgcgc > 2:2457506/1‑93 (MQ=255)
ttCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTgcgc > 2:4311663/1‑93 (MQ=255)
ttCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCCTGCAGCACGGAGAGA‑CGTTgcgc > 2:2628001/1‑93 (MQ=255)
catcaCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGa > 1:3687996/1‑93 (MQ=255)
catcaCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGa > 2:3149931/1‑93 (MQ=255)
atcaCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGAc > 2:1811965/1‑93 (MQ=255)
atcaCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGAc > 2:3192040/1‑93 (MQ=255)
atcaCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGAc < 1:2835814/93‑1 (MQ=255)
tcaCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACg > 2:2752576/1‑93 (MQ=255)
caCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACgg < 2:2038420/93‑1 (MQ=255)
caCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACgg > 1:3119855/1‑93 (MQ=255)
aCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACggg > 2:1446367/1‑92 (MQ=255)
aCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGt < 2:412820/93‑1 (MQ=255)
aCGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGt < 2:4533517/93‑1 (MQ=255)
cGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTg > 2:3690972/1‑93 (MQ=255)
gCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGc < 2:91403/93‑1 (MQ=255)
gCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGc < 2:2586165/93‑1 (MQ=255)
cAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCg < 2:3874032/93‑1 (MQ=255)
gtgtCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGc < 2:3104258/93‑1 (MQ=255)
gtgtCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGc > 1:4473/1‑93 (MQ=255)
tCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGctc‑t > 1:1045282/1‑93 (MQ=255)
cAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGctc‑tt > 1:3301593/1‑92 (MQ=255)
cAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGctc‑tc > 1:1382951/1‑93 (MQ=255)
cACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCttt > 1:2461778/1‑93 (MQ=255)
cACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCttt < 2:3952182/93‑1 (MQ=255)
aCCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTtc > 2:2247231/1‑93 (MQ=255)
ccAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCttttt > 2:2414731/1‑91 (MQ=255)
ccAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTtct > 1:2392497/1‑93 (MQ=255)
ccAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACCGCGCGGCGC‑TCTTtct > 2:622449/1‑93 (MQ=255)
cAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTtctc < 1:950779/93‑1 (MQ=255)
agagAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTTCTcc > 1:3503674/1‑93 (MQ=255)
agagAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTTCTcc > 1:791686/1‑93 (MQ=255)
gagaACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTTCTCCa > 1:2276305/1‑93 (MQ=255)
gagaACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTTCTCCa > 2:3374614/1‑93 (MQ=255)
gagaACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTTCTCCa > 2:3374613/1‑93 (MQ=255)
gagaACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTTCTCCa > 1:1820652/1‑93 (MQ=255)
gagaACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTTCTCCa < 2:2983601/93‑1 (MQ=255)
agaACTGAACGCCGCCTTGTCGAAGACCTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTTCTCCAg < 2:1098235/93‑1 (MQ=255)
agaACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTTCTCCAg < 1:3459185/93‑1 (MQ=255)
aaCTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGG‑GAGACCGTTGGGCG‑CGGTGGCGCTCTTCTTTCTCCAggt > 2:1270974/1‑91 (MQ=255)
aCTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGGGGGGCTC‑TCTTTCTCCAGCGt > 1:142433/1‑93 (MQ=255)
cTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTTCTCCAGCGTa < 2:1686837/93‑1 (MQ=255)
cTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTTCTCCAGCGTa > 1:3935684/1‑93 (MQ=255)
tGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTTCTCCAGCGTAc < 2:2063360/93‑1 (MQ=255)
|
TGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACACCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA‑CGTTGCGCGACGGTGCGGCTC‑TCTTTCTCCAGCGTACC > NC_000913/4251692‑4251870
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACACCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCGCGGT > NC_000913/4251691‑4251875
|
CTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCC < SRR4302544.3182838/94‑1 (MQ=60)
CTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCC > SRR4302544.3416309/1‑94 (MQ=60)
CTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCC > SRR4302544.3460169/1‑94 (MQ=60)
TGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCG < SRR4302544.1476637/94‑1 (MQ=60)
AAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTT > SRR4302544.4165047/1‑94 (MQ=60)
ACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGT > SRR4302544.1132631/1‑94 (MQ=60)
CTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCG < SRR4302544.3045749/94‑1 (MQ=60)
CTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCG < SRR4302544.433313/94‑1 (MQ=60)
CTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCG < SRR4302544.3479417/94‑1 (MQ=60)
TTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGA > SRR4302544.2087457/1‑94 (MQ=60)
CATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATGCCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAG < SRR4302544.690970/94‑1 (MQ=60)
CATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAG < SRR4302544.1834550/94‑1 (MQ=60)
CATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAG < SRR4302544.2735188/94‑1 (MQ=60)
TCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAA > SRR4302544.249697/1‑94 (MQ=60)
TTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTC > SRR4302544.3085842/1‑94 (MQ=60)
TTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCC < SRR4302544.4126098/94‑1 (MQ=60)
TCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCG < SRR4302544.1679689/94‑1 (MQ=60)
TCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCG < SRR4302544.2788575/94‑1 (MQ=60)
CTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGG > SRR4302544.1512259/1‑94 (MQ=60)
CTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGG > SRR4302544.4372295/1‑94 (MQ=60)
CTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGG > SRR4302544.1265609/1‑94 (MQ=60)
TGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGC > SRR4302544.910878/1‑94 (MQ=60)
GCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCG > SRR4302544.315134/1‑94 (MQ=60)
CCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGC < SRR4302544.1930236/94‑1 (MQ=60)
CGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCG > SRR4302544.595814/1‑94 (MQ=60)
CGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCG > SRR4302544.595815/1‑94 (MQ=60)
GTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTT > SRR4302544.3555584/1‑94 (MQ=60)
CGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGAT > SRR4302544.3088510/1‑94 (MQ=60)
CGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGAT > SRR4302544.2061979/1‑94 (MQ=60)
GGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATG < SRR4302544.3570137/94‑1 (MQ=60)
GGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATG < SRR4302544.4067940/94‑1 (MQ=60)
GCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGC < SRR4302544.399393/94‑1 (MQ=60)
CATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCC > SRR4302544.3234022/1‑94 (MQ=60)
CATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCC > SRR4302544.3463106/1‑94 (MQ=60)
CATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCC > SRR4302544.3535190/1‑94 (MQ=60)
CATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGCTGATGCC > SRR4302544.189416/1‑94 (MQ=60)
ATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGCACTGAACTCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCG > SRR4302544.493329/1‑94 (MQ=60)
ATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCG > SRR4302544.2539295/1‑94 (MQ=60)
ATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCG < SRR4302544.2048379/94‑1 (MQ=60)
ATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCG > SRR4302544.119612/1‑94 (MQ=60)
ATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCG > SRR4302544.2968246/1‑94 (MQ=60)
ATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCG < SRR4302544.2092981/94‑1 (MQ=60)
CGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTG > SRR4302544.3093463/1‑94 (MQ=60)
CCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCA > SRR4302544.4210004/1‑94 (MQ=60)
CTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCA > SRR4302544.420888/1‑94 (MQ=60)
ATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACG < SRR4302544.1404952/94‑1 (MQ=60)
ATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACG > SRR4302544.3755112/1‑94 (MQ=60)
ATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACG > SRR4302544.1279513/1‑94 (MQ=60)
TCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGG < SRR4302544.3435036/94‑1 (MQ=60)
ACGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGACCTCCGGCGCGTTGATGCCGTGCAGCACGG < SRR4302544.2553871/94‑1 (MQ=60)
CGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGA > SRR4302544.3081483/1‑94 (MQ=60)
GCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAG < SRR4302544.1252456/94‑1 (MQ=60)
CTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGA < SRR4302544.1726108/94‑1 (MQ=60)
CTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGA > SRR4302544.96481/1‑94 (MQ=60)
GATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACACCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA > SRR4302544.2176812/1‑94 (MQ=60)
GATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACACCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGA > SRR4302544.2176811/1‑94 (MQ=60)
ATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGAC < SRR4302544.1222822/94‑1 (MQ=60)
TATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACG > SRR4302544.1972948/1‑94 (MQ=60)
TACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTT > SRR4302544.2987881/1‑94 (MQ=60)
TACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTT > SRR4302544.2987880/1‑94 (MQ=60)
ACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATTCCGTGCAGCACGGAGAGACGTTG < SRR4302544.2830313/94‑1 (MQ=60)
CCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCG > SRR4302544.3785821/1‑94 (MQ=60)
CTTCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGG > SRR4302544.703394/1‑94 (MQ=60)
TCATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGA > SRR4302544.3724756/1‑94 (MQ=60)
ATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACG > SRR4302544.3294381/1‑94 (MQ=60)
ATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACG < SRR4302544.2863208/94‑1 (MQ=60)
ATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACG > SRR4302544.3846563/1‑94 (MQ=60)
ATCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACG > SRR4302544.1839895/1‑94 (MQ=60)
TCACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGG > SRR4302544.3149519/1‑94 (MQ=60)
CACGCAGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGT > SRR4302544.1940358/1‑94 (MQ=60)
AGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGC > SRR4302544.4509/1‑94 (MQ=60)
AGTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGC > SRR4302544.2937320/1‑94 (MQ=60)
GTGTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCC > SRR4302544.2441169/1‑94 (MQ=60)
GTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCT > SRR4302544.1055648/1‑94 (MQ=60)
GTCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCT < SRR4302544.190638/94‑1 (MQ=60)
TCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTT > SRR4302544.3333039/1‑94 (MQ=60)
TCAGCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTC > SRR4302544.1396765/1‑94 (MQ=60)
GCACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTT > SRR4302544.2485281/1‑94 (MQ=60)
ACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCT > SRR4302544.2992145/1‑94 (MQ=60)
ACCAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCT > SRR4302544.2415168/1‑94 (MQ=60)
CAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCC > SRR4302544.799347/1‑94 (MQ=60)
CAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCC > SRR4302544.3537095/1‑94 (MQ=60)
CAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCC < SRR4302544.960127/94‑1 (MQ=60)
CAGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGGGCGGCTCTtcttccac > SRR4302544.799348/1‑86 (MQ=60)
AGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCG > SRR4302544.2297868/1‑94 (MQ=60)
AGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCA > SRR4302544.3611943/1‑94 (MQ=60)
AGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCA > SRR4302544.2297739/1‑94 (MQ=60)
AGAGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCA > SRR4302544.1838406/1‑94 (MQ=60)
AGAACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGC < SRR4302544.3492202/94‑1 (MQ=60)
AACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGT > SRR4302544.3160950/1‑94 (MQ=60)
AACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGGGGGGCTCTCTTTCTCCAGCGT > SRR4302544.143784/1‑94 (MQ=60)
ACTGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTA > SRR4302544.3974764/1‑94 (MQ=60)
TGAACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACC > SRR4302544.2111161/1‑94 (MQ=60)
GAACTCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCG < SRR4302544.710358/94‑1 (MQ=60)
AACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCGG > SRR4302544.3663681/1‑94 (MQ=60)
ACGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCGCG > SRR4302544.3358444/1‑94 (MQ=60)
CGCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGTGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCGCGG > SRR4302544.2196912/1‑94 (MQ=60)
GCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTGCAGCGTACCGCGGT > SRR4302544.790019/1‑94 (MQ=60)
GCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCGCGGT < SRR4302544.3314378/94‑1 (MQ=60)
GCCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCGCGGT > SRR4302544.887720/1‑94 (MQ=60)
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CTGATAAACCTTCATCGTTTCTGCCGGTTCGGCATCGCCGCTATCGCTGATATACCCTTCATCACGCAGTGTCAGCACCAGAGAACTGAACACCGCCTTGTCGAAGAACTCCGGCGCGTTGATGCCGTGCAGCACGGAGAGACGTTGCGCGACGGTGCGGCTCTCTTTCTCCAGCGTACCGCGGT > NC_000913/4251691‑4251875
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
