Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,725,518 |
(G)6→5 |
coding (836/1098 nt) |
nemA → |
N‑ethylmaleimide reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,725,513 | 0 | G | . | 98.3%
| 768.3
/ 3.5
| 174 | coding (831/1098 nt) | nemA | N‑ethylmaleimide reductase |
| Reads supporting (aligned to +/- strand): ref base G (2/1); new base . (93/77); total (96/78) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 195 total aligned reads displayed.
GGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAG > NC_000913/1725421‑1725601
|
gaccGAAGGAAGAAGGCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgg < 2:5497571/91‑1 (MQ=255)
gCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgg > 1:1945087/1‑93 (MQ=255)
ccGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgggg > 1:5628439/1‑93 (MQ=255)
cGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCggggg < 2:5456394/93‑1 (MQ=255)
cGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCggggg > 1:3579125/1‑93 (MQ=255)
gAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgggggt < 2:3608403/93‑2 (MQ=255)
gAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgggggt > 1:2314220/1‑92 (MQ=255)
tGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCgggggtgaa > 2:1613031/1‑89 (MQ=255)
gaagaaGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAAc > 1:4594859/1‑93 (MQ=255)
agaagCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCg > 1:5681618/1‑93 (MQ=255)
gaagCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGt > 1:5979933/1‑93 (MQ=255)
aagCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGta > 1:5788335/1‑93 (MQ=255)
agCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGtat > 2:4244650/1‑93 (MQ=255)
agCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGtat < 2:4635819/93‑1 (MQ=255)
agCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGtat > 2:5218107/1‑93 (MQ=255)
agCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGtat > 1:2245064/1‑93 (MQ=255)
agCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGtat > 2:3911287/1‑93 (MQ=255)
ccGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATAc > 2:691122/1‑93 (MQ=255)
ccGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATAc < 2:4192172/93‑1 (MQ=255)
cGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACt < 1:2808169/93‑1 (MQ=255)
cGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACt > 2:1712089/1‑93 (MQ=255)
cGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACt > 1:178082/1‑93 (MQ=255)
gATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTg > 1:3689008/1‑93 (MQ=255)
gATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTg > 1:4700255/1‑93 (MQ=255)
aTGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGa < 2:856088/93‑1 (MQ=255)
aTGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGa < 2:4702935/93‑1 (MQ=255)
aTGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGa < 1:5953623/93‑1 (MQ=255)
tGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGAt > 2:4321022/1‑93 (MQ=255)
gCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATg < 2:3949037/93‑1 (MQ=255)
cattGTATCTGATTGAACAACTGGGTAATCGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGc < 1:5675689/90‑1 (MQ=255)
cACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGc < 1:6286420/93‑1 (MQ=255)
cACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGG‑GGGGGGTGAACCGTATACTGATGc < 1:1681579/93‑1 (MQ=255)
aCTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCg > 1:5364897/1‑93 (MQ=255)
tGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGtt > 2:4964792/1‑93 (MQ=255)
tGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGtt < 1:83994/93‑1 (MQ=255)
tATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTcc > 2:3417864/1‑93 (MQ=255)
tATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTcc < 1:3154344/93‑1 (MQ=255)
aTCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCcg < 1:251641/93‑1 (MQ=255)
aTCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCcg > 2:5517153/1‑93 (MQ=255)
gATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGaa > 2:1432064/1‑93 (MQ=255)
aTTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGaaa < 2:4912257/93‑1 (MQ=255)
aTTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGaaa > 1:4496572/1‑93 (MQ=255)
ttGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGaaaa < 2:35265/93‑1 (MQ=255)
tGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGaaaaa < 2:1970280/93‑1 (MQ=255)
gAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAg < 2:4402372/93‑1 (MQ=255)
gAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAg < 2:1330091/93‑1 (MQ=255)
aacaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGt < 1:3632601/93‑1 (MQ=255)
acaacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTa < 1:6347221/93‑1 (MQ=255)
caacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTAc < 2:5757187/93‑1 (MQ=255)
caacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTAc > 2:6684395/1‑93 (MQ=255)
caacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTAc < 1:3452334/93‑1 (MQ=255)
caacTGGGTAAACGCAGCATTGCTTATCTGCATATGTCAGACCCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAACTAc < 1:4312667/93‑1 (MQ=255)
aacTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTAcg > 2:3115997/1‑93 (MQ=255)
tGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACgcgc > 2:1515465/1‑93 (MQ=255)
gggTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGcc < 2:1889109/93‑1 (MQ=255)
gTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCg > 1:6148793/1‑93 (MQ=255)
tAAACGCGGCATTTCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGt < 2:2452037/93‑1 (MQ=255)
tAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATCCTGATGCGTTCCGCGAAAAAGTACGCGCCCGt < 2:2357221/93‑1 (MQ=255)
tAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGt > 2:4978668/1‑93 (MQ=255)
tAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGt > 2:2399600/1‑93 (MQ=255)
tAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGt < 1:1020924/93‑1 (MQ=255)
aaaCGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGtt > 2:6313631/1‑93 (MQ=255)
aCGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTc > 1:4191544/1‑93 (MQ=255)
cgcgGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTcc < 2:4055719/93‑1 (MQ=255)
gcgGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAGAGTACGCGCCCGTTTCCa > 2:3438497/1‑93 (MQ=255)
gcgGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCa > 2:2919498/1‑93 (MQ=255)
ggCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACg > 2:6165499/1‑93 (MQ=255)
ggCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACg > 2:112752/1‑93 (MQ=255)
ggCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACg > 1:4655663/1‑93 (MQ=255)
aTTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTc > 1:1127160/1‑93 (MQ=255)
aTTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTc > 1:5255552/1‑93 (MQ=255)
ttGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTcc > 2:4486094/1‑93 (MQ=255)
ttGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTcc < 1:5511141/93‑1 (MQ=255)
ttATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGAtt < 1:4440503/93‑1 (MQ=255)
tATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTa < 2:2542508/93‑1 (MQ=255)
aTCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTAt > 2:2754642/1‑93 (MQ=255)
aTCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTAt < 1:5160133/93‑1 (MQ=255)
tCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATc > 2:2494217/1‑93 (MQ=255)
tCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATc > 2:582462/1‑93 (MQ=255)
cATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcg < 2:1005661/93‑1 (MQ=255)
atatGTCAGAAACAGGTTGGAC‑GGGGGTGAACCGTATGCTGATGCGTTCCGCGAAAAAGTCCGCGCCCGTTTCCACGGTCCGATTATCGgcgc < 2:6022391/93‑1 (MQ=255)
atatGTCAAAACCAGATTGTGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGgcgc > 1:6560015/1‑93 (MQ=255)
tatGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCa > 1:2162307/1‑93 (MQ=255)
gTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGt < 2:768213/93‑1 (MQ=255)
gTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGt < 2:4683847/93‑1 (MQ=255)
cAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGc < 1:204978/93‑1 (MQ=255)
cAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGc < 1:4969965/93‑1 (MQ=255)
aGAACCAGATTGGGC‑GGGGGTGACCCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCa < 1:2657438/93‑1 (MQ=255)
aGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCa < 1:6077399/93‑1 (MQ=255)
aGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCa < 1:2678717/93‑1 (MQ=255)
gAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCAt > 1:4006647/1‑93 (MQ=255)
aCCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATac < 2:3244303/93‑1 (MQ=255)
ccAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATaca > 2:6439805/1‑93 (MQ=255)
ccAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATaca > 1:1090257/1‑93 (MQ=255)
cAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATacac < 2:5976893/93‑1 (MQ=255)
aGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATAcaca < 1:3805930/93‑1 (MQ=255)
aGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATAcaca < 1:4348252/93‑1 (MQ=255)
gATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAg > 1:2121497/1‑93 (MQ=255)
gATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAg > 1:680473/1‑93 (MQ=255)
aTTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGt < 1:5838000/93‑1 (MQ=255)
|
GGCCCGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAG > NC_000913/1725421‑1725601
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGA > NC_000913/1725425‑1725611
|
CGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGT > SRR4302536.388590/1‑94 (MQ=60)
CGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGT > SRR4302536.2384455/1‑94 (MQ=60)
AATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGA > SRR4302536.6528117/1‑94 (MQ=60)
AATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGA < SRR4302536.60062/94‑1 (MQ=60)
TGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAAC > SRR4302536.4732799/1‑94 (MQ=60)
AAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCG > SRR4302536.5850546/1‑94 (MQ=60)
AGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGGTTATCTGCATATGTCAGAAACAGAATGGGCTGGGGG‑GAACCGT > SRR4302536.4738109/1‑94 (MQ=60)
AGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGT > SRR4302536.6158235/1‑94 (MQ=60)
GAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTA > SRR4302536.5960654/1‑94 (MQ=60)
AAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTAT > SRR4302536.2313020/1‑94 (MQ=60)
AAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTAT > SRR4302536.219793/1‑94 (MQ=60)
AAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGG‑TGGGGGTGAACCGTAT > SRR4302536.4603160/1‑94 (MQ=60)
CCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACT > SRR4302536.182780/1‑94 (MQ=60)
CGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTG < SRR4302536.2891430/94‑1 (MQ=60)
CGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTG > SRR4302536.4329869/1‑94 (MQ=60)
CGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTG > SRR4302536.3799334/1‑94 (MQ=60)
CGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTG > SRR4302536.4841587/1‑94 (MQ=60)
ATGCACTGTATCTGATTGACCAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGAT < SRR4302536.308812/94‑1 (MQ=60)
ATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGAT < SRR4302536.6130988/94‑1 (MQ=60)
TGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATG < SRR4302536.1130352/94‑1 (MQ=60)
TGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATG < SRR4302536.4807273/94‑1 (MQ=60)
CATTGTATCTGATTGAACAACTGGGTAATCGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCG < SRR4302536.5844430/94‑1 (MQ=60)
CACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCG > SRR4302536.5524925/1‑94 (MQ=60)
CACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCG < SRR4302536.6473761/94‑1 (MQ=60)
CACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGG‑GGGGGGTGAACCGTATACTGATGCG < SRR4302536.1730311/94‑1 (MQ=60)
CTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTT < SRR4302536.556711/94‑1 (MQ=60)
CTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTT > SRR4302536.1792416/1‑94 (MQ=60)
TGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTC < SRR4302536.86242/94‑1 (MQ=60)
TATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCG < SRR4302536.3246717/94‑1 (MQ=60)
ATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGC < SRR4302536.258358/94‑1 (MQ=60)
ATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGC > SRR4302536.5482487/1‑94 (MQ=60)
GATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAA > SRR4302536.4631538/1‑94 (MQ=60)
ATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAA > SRR4302536.2233330/1‑94 (MQ=60)
TTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAA < SRR4302536.3701808/94‑1 (MQ=60)
AACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTA < SRR4302536.3741258/94‑1 (MQ=60)
ACAACTGGGTAAATGCGGCATTGCTTATCTGCATATGTCAGAACCAGACTGAGC‑GGGGGTGCACCGTATACTGATGCGATCCGTGAAAAAGTAC > SRR4302536.6258659/1‑94 (MQ=60)
ACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTAC < SRR4302536.6536300/94‑1 (MQ=60)
CAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACG < SRR4302536.3555156/94‑1 (MQ=60)
CAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACG < SRR4302536.468068/94‑1 (MQ=60)
CAACTGGGTAAACGCAGCATTGCTTATCTGCATATGTCAGACCCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAACTACG < SRR4302536.4441741/94‑1 (MQ=60)
AACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGC > SRR4302536.3678049/1‑94 (MQ=60)
ACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCG < SRR4302536.4770762/94‑1 (MQ=60)
CTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGC > SRR4302536.5385643/1‑94 (MQ=60)
TGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCC > SRR4302536.262892/1‑94 (MQ=60)
GGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCC < SRR4302536.5849302/94‑1 (MQ=60)
GGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCG > SRR4302536.6331987/1‑94 (MQ=60)
TAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTT < SRR4302536.1051147/94‑1 (MQ=60)
AAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTT > SRR4302536.1471724/1‑94 (MQ=60)
AACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTC > SRR4302536.4316103/1‑94 (MQ=60)
CGCGTCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCTTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCA < SRR4302536.1366444/94‑1 (MQ=60)
GCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCAC > SRR4302536.5887228/1‑94 (MQ=60)
CGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACG > SRR4302536.4795646/1‑94 (MQ=60)
GGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGG > SRR4302536.2466450/1‑94 (MQ=60)
CATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGTGGAT‑AACCTGATACTTATGCGATCCGCGAAAAAGCACGCGGCCGTTTCCACcgcc > SRR4302536.4419572/1‑90 (MQ=41)
CATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTC > SRR4302536.1161023/1‑94 (MQ=60)
CATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTC > SRR4302536.5412153/1‑94 (MQ=60)
ATTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCC > SRR4302536.376571/1‑94 (MQ=60)
TTGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCG < SRR4302536.5675521/94‑1 (MQ=60)
TGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGA > SRR4302536.4306689/1‑94 (MQ=60)
TGCTTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTAAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGGCCGA < SRR4302536.4477004/94‑1 (MQ=60)
TTATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTA < SRR4302536.4573807/94‑1 (MQ=60)
TATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTAT > SRR4302536.6328960/1‑94 (MQ=60)
ATCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATC < SRR4302536.5314097/94‑1 (MQ=60)
TCTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCG < SRR4302536.2015854/94‑1 (MQ=60)
atggtaaaGTCAGAACCAGATGGGGC‑TGGGGTGAAGCGTATACGGATGAGTACCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCCATTATCGG < SRR4302536.5657482/86‑1 (MQ=45)
CTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGG < SRR4302536.2165863/94‑1 (MQ=60)
CTGCATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGG > SRR4302536.1875744/1‑94 (MQ=60)
CTGCATATGTCAGAACCAGATTGCGC‑GGGGGTGACCCGTATCCTGATGCGTCCCGCTAAAACGTACGCGCCCGTTTCCACGGTCCGATTATCGG < SRR4302536.2434291/94‑1 (MQ=60)
CATATGTCAAAACCAGATTGTGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGC > SRR4302536.6755318/1‑94 (MQ=60)
ATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCA > SRR4302536.6009468/1‑94 (MQ=60)
ATATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCA > SRR4302536.2227346/1‑94 (MQ=60)
TATGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAG > SRR4302536.5805457/1‑94 (MQ=60)
TGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGT > SRR4302536.637092/1‑94 (MQ=60)
TGTCAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGT > SRR4302536.6787787/1‑94 (MQ=60)
CAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCA < SRR4302536.5119256/94‑1 (MQ=60)
CAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCA < SRR4302536.210374/94‑1 (MQ=60)
CAGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCA > SRR4302536.3314775/1‑94 (MQ=60)
AGAACCAGATTGGGC‑GGGGGTGACCCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCAT < SRR4302536.2736988/94‑1 (MQ=60)
AGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCAT > SRR4302536.4125541/1‑94 (MQ=60)
AGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCAT < SRR4302536.6258685/94‑1 (MQ=60)
AGAACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCAT < SRR4302536.2758766/94‑1 (MQ=60)
ACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACA > SRR4302536.2332799/1‑94 (MQ=60)
ACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACA > SRR4302536.1122947/1‑94 (MQ=60)
ACCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGCGCATACA > SRR4302536.77514/1‑94 (MQ=60)
CCAGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACAC > SRR4302536.6679676/1‑94 (MQ=60)
AGATTGGGC‑GGGGGTGAACTGTATACTGATGCGTTCCGCGAAAAATTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAG < SRR4302536.890972/94‑1 (MQ=60)
AGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAG < SRR4302536.4478387/94‑1 (MQ=60)
AGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAG > SRR4302536.700429/1‑94 (MQ=60)
AGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAG < SRR4302536.3919387/94‑1 (MQ=60)
AGATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAG > SRR4302536.2185243/1‑94 (MQ=60)
ATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTA < SRR4302536.6251657/94‑1 (MQ=60)
ATTGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTA < SRR4302536.6011936/94‑1 (MQ=60)
TGGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGA < SRR4302536.2876004/94‑1 (MQ=60)
GGGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAA > SRR4302536.964493/1‑94 (MQ=60)
GGC‑GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAA > SRR4302536.5088716/1‑94 (MQ=60)
gcGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAA > SRR4302536.4773060/3‑94 (MQ=60)
GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAG < SRR4302536.3735831/94‑1 (MQ=60)
GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAG < SRR4302536.3061381/94‑1 (MQ=60)
GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAG > SRR4302536.2818876/1‑94 (MQ=60)
GGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAG > SRR4302536.2524788/1‑94 (MQ=60)
GGGTGAACCGTATACTGATGCGTTCCGCGAGAAAGTATGCGCCCGTTTCCACGCTCCGATCATCGGCGCAGGTGCATACACAGTAGAAAAAGCT > SRR4302536.4457896/1‑94 (MQ=60)
GGGTAAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCT < SRR4302536.599483/94‑1 (MQ=60)
GGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTG < SRR4302536.4553745/94‑1 (MQ=60)
GTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGA > SRR4302536.1502035/1‑94 (MQ=60)
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CGAATGAAGAAGCCGATGCACTGTATCTGATTGAACAACTGGGTAAACGCGGCATTGCTTATCTGCATATGTCAGAACCAGATTGGGCGGGGGGTGAACCGTATACTGATGCGTTCCGCGAAAAAGTACGCGCCCGTTTCCACGGTCCGATTATCGGCGCAGGTGCATACACAGTAGAAAAAGCTGA > NC_000913/1725425‑1725611
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
