Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,727,504 |
A→G |
T132A (ACT→GCT) |
lhr → |
Lhr |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,727,504 | 0 | A | G | 100.0%
| 596.3
/ NA
| 185 | T132A (ACT→GCT) | lhr | Lhr |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (100/85); total (100/85) |
Only 100 of 191 total aligned reads displayed.
CAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTACTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATG > NC_000913/1727414‑1727593
|
cAGCGCAACTTGCAGATCCCGTTGAATGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCt < 2:478520/93‑1 (MQ=255)
cAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCt < 1:6430993/93‑1 (MQ=255)
cAGCGCAACTAGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCt < 2:2690014/93‑1 (MQ=255)
aGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTg > 1:1859762/1‑93 (MQ=255)
gcgcAACTTGCAGATCCCGTTGATGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAATGGACGTCAATCTTCGCGTAGGGATCAGTGCTgg > 1:1070752/1‑93 (MQ=255)
gcgcAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTACGGATCCGTGCTgg > 1:5676338/1‑93 (MQ=255)
cgcAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGc < 2:3710214/93‑1 (MQ=255)
cAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGa < 2:4923237/93‑1 (MQ=255)
cAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGa < 1:26713/93‑1 (MQ=255)
cAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCCTGCTGGCGa > 1:3503845/1‑93 (MQ=255)
cAACTTGCAGATCCCGTTGAAGGGGATTGCCGGTGAACGGCGGCGGCGCGGCGAAACGGAAGGCAATCTTGGCGTAGGGATCCGTGCTggagg > 1:2270155/1‑90 (MQ=255)
aCTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATa < 2:5415877/93‑1 (MQ=255)
aCTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATa < 2:5742568/93‑1 (MQ=255)
aCTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATa > 1:4139480/1‑93 (MQ=255)
ttGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACg > 2:1368040/1‑93 (MQ=255)
gCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGcc < 1:6037579/93‑1 (MQ=255)
gCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGcc > 1:2146859/1‑93 (MQ=255)
gCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGcc < 1:3142368/93‑1 (MQ=255)
gCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGcc < 1:3944943/93‑1 (MQ=255)
gATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGc > 2:4501377/1‑93 (MQ=255)
aTCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGca > 1:1600794/1‑93 (MQ=255)
aTCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGca < 2:1456690/93‑1 (MQ=255)
tCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGcac > 1:620526/1‑93 (MQ=255)
cGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAgg < 1:740424/93‑1 (MQ=255)
ttGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGaa > 2:5304277/1‑93 (MQ=255)
ttGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGaa > 2:3049128/1‑93 (MQ=255)
gAAGGGTATTGCCGATGAACGGCGGCGGGGCGGCGAAAGGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTTCACAGGAACg > 1:3815837/1‑93 (MQ=255)
gAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACg > 2:6664352/1‑93 (MQ=255)
gAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACg > 2:2153536/1‑93 (MQ=255)
aGGGTATTGCCGATGAACTGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACgca < 2:4758285/93‑1 (MQ=255)
aGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACgca < 2:558482/93‑1 (MQ=255)
gggTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACgcag > 2:5910326/1‑93 (MQ=255)
ggTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACgcagc > 2:1263977/1‑93 (MQ=255)
gTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACgcagca > 2:1756300/1‑93 (MQ=255)
aTTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCaaa > 1:4740736/1‑93 (MQ=255)
aTTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCaaa > 1:5097437/1‑93 (MQ=255)
ttGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAAc < 2:3253025/93‑1 (MQ=255)
ttGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAAc > 2:6298843/1‑93 (MQ=255)
ttGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAAc > 2:596754/1‑93 (MQ=255)
ttGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAAc < 2:1169544/93‑1 (MQ=255)
tGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACt > 2:2862760/1‑93 (MQ=255)
tGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACt < 2:79333/93‑1 (MQ=255)
tGCAGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACt < 1:1341320/93‑1 (MQ=255)
gATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCAcc > 1:1969339/1‑93 (MQ=255)
gATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCAcc < 2:5152043/93‑1 (MQ=255)
aTGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCAccc < 2:5006214/93‑1 (MQ=255)
tGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCg < 1:2425878/93‑1 (MQ=255)
tGAACGACGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCg > 1:5559392/1‑93 (MQ=255)
gAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGt > 1:6278282/1‑93 (MQ=255)
aCGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTaa > 2:3511911/1‑93 (MQ=255)
aCGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTaa < 1:1125016/93‑1 (MQ=255)
gcggcgcggcGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATccgcc < 2:3788159/93‑1 (MQ=255)
cggcgcggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATccgccg < 1:5960230/93‑1 (MQ=255)
ggcgcggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCgg > 2:6474308/1‑93 (MQ=255)
gcgcggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGa > 1:4779160/1‑93 (MQ=255)
cgcggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGat > 1:334854/1‑93 (MQ=255)
gcggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGata < 1:4249520/93‑1 (MQ=255)
gcggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGata < 1:69071/93‑1 (MQ=255)
cggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGatat < 2:4561519/93‑1 (MQ=255)
cggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGatat < 2:3838425/93‑1 (MQ=255)
cggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGatat < 1:3227988/93‑1 (MQ=255)
ggcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATAtt < 1:1528544/93‑1 (MQ=255)
gcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTc < 2:3945957/93‑1 (MQ=255)
gcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTc > 1:1418626/1‑93 (MQ=255)
gcgAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTc < 2:5478729/93‑1 (MQ=255)
gAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTg > 2:4649845/1‑93 (MQ=255)
gAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTg > 2:2338830/1‑93 (MQ=255)
gAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTg < 1:6161930/93‑1 (MQ=255)
aaaCGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGa > 2:4827185/1‑93 (MQ=255)
aaaCGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGa < 1:3547783/93‑1 (MQ=255)
aaCGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGAt > 2:6001425/1‑93 (MQ=255)
aCGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATc > 2:6701274/1‑93 (MQ=255)
cGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATca > 1:5114619/1‑93 (MQ=255)
cGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATca > 2:4542989/1‑93 (MQ=255)
ggAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATcac > 1:1973257/1‑93 (MQ=255)
gAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATcacc > 1:1006170/1‑93 (MQ=255)
gTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACcaca > 2:4330160/1‑93 (MQ=255)
cAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCACACTCACCCGTAATCCGCCGGATATTCTGATCACCAcccc > 1:1402851/1‑93 (MQ=255)
cAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACAcc < 2:292889/93‑1 (MQ=255)
aaTCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACAccc > 2:897490/1‑93 (MQ=255)
aaTCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACAccc < 2:4486557/93‑1 (MQ=255)
aaTCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACAccc < 2:4786583/93‑1 (MQ=255)
aTCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCg > 1:98436/1‑93 (MQ=255)
aTCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCg > 1:415607/1‑93 (MQ=255)
tCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGa < 2:3173514/93‑1 (MQ=255)
tCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGa < 2:579685/93‑1 (MQ=255)
ttCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAAt < 2:2642156/93‑1 (MQ=255)
ttCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAAt > 1:363920/1‑93 (MQ=255)
ttCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATACGCCGGATATTCTGATCACCACACCCGAAt > 1:484419/1‑93 (MQ=255)
gcgTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCAc > 2:3482310/1‑93 (MQ=255)
gcgTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCAc > 2:4373016/1‑93 (MQ=255)
gggATCCGTGCTGGCGATACGCCTGCACAGGTACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTAt > 1:5342632/1‑93 (MQ=255)
gggATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTAt < 2:5557085/93‑1 (MQ=255)
gggATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTAt < 2:657379/93‑1 (MQ=255)
gggATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTAt > 1:1033577/1‑93 (MQ=255)
gggATCCGTGCTGGAGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCAACACACCCGAATCACTCTAt > 1:1816216/1‑93 (MQ=255)
ggATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATc < 2:280975/93‑1 (MQ=255)
gcaTCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATc < 1:2535680/91‑1 (MQ=255)
aTCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTg < 2:2244182/93‑1 (MQ=255)
ccGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGAt > 1:3528515/1‑93 (MQ=255)
|
CAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTACTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATG > NC_000913/1727414‑1727593
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTCAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTACTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATGCTGA > NC_000913/1727411‑1727597
|
GTTCAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTG > SRR4302536.3781684/1‑94 (MQ=60)
GTTCAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTG < SRR4302536.3728609/94‑1 (MQ=60)
GTTCAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTG > SRR4302536.1739847/1‑94 (MQ=60)
TTCAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGC > SRR4302536.3634293/1‑94 (MQ=60)
TCAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCT < SRR4302536.2262849/94‑1 (MQ=60)
CAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTG > SRR4302536.2350627/1‑94 (MQ=60)
CAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTG > SRR4302536.6291075/1‑94 (MQ=60)
CAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTG < SRR4302536.6623202/94‑1 (MQ=60)
CAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTG > SRR4302536.1915787/1‑94 (MQ=60)
AGCGCAACTTGCAGATCCCGTTGATGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAATGGACGTCAATCTTCGCGTAGGGATCAGTGCTGG > SRR4302536.1102775/1‑94 (MQ=60)
AGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTACGGATCCGTGCTGG > SRR4302536.5845106/1‑94 (MQ=60)
GCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGA < SRR4302536.598511/94‑1 (MQ=60)
GCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCCTGCTGGCGA > SRR4302536.3608413/1‑94 (MQ=60)
CAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGAT < SRR4302536.27454/94‑1 (MQ=60)
AACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATA > SRR4302536.4262262/1‑94 (MQ=60)
ACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATAC > SRR4302536.2168262/1‑94 (MQ=60)
TGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCC > SRR4302536.2211302/1‑94 (MQ=60)
GCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCT < SRR4302536.2265289/94‑1 (MQ=60)
GCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCT < SRR4302536.6217636/94‑1 (MQ=60)
GCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCT < SRR4302536.4062144/94‑1 (MQ=60)
GCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCT < SRR4302536.3306338/94‑1 (MQ=60)
GCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCT < SRR4302536.3234371/94‑1 (MQ=60)
CGATCCCGTTGAAGTGTAGTGCCGGTGAAGCGCGGCGGCTAGGCGAAAGGGAAGTTAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGC < SRR4302536.4294790/94‑1 (MQ=40)
GATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCA > SRR4302536.1647519/1‑94 (MQ=60)
ATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCAC > SRR4302536.638958/1‑94 (MQ=60)
ATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCAC > SRR4302536.3628138/1‑94 (MQ=60)
ATACCGTTGAGGAGTATTGCCTATGAACGCCGGCTGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCAC < SRR4302536.364110/94‑1 (MQ=60)
TCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACA > SRR4302536.3420770/1‑94 (MQ=60)
CCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAG > SRR4302536.5628829/1‑94 (MQ=60)
CCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGG < SRR4302536.4068080/94‑1 (MQ=60)
CGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGA < SRR4302536.762148/94‑1 (MQ=60)
TTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAAC < SRR4302536.3998740/94‑1 (MQ=60)
TGAAGGGTATTGCCGATGAACGGCGGCGGGGCGGCGAAAGGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTTCACAGGAACG > SRR4302536.3929553/1‑94 (MQ=60)
TGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACG < SRR4302536.3662389/94‑1 (MQ=60)
TGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACG < SRR4302536.151750/94‑1 (MQ=60)
TGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACG < SRR4302536.1145883/94‑1 (MQ=60)
GAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGTGACACGCCTGCACAGGAATGC > SRR4302536.5442819/1‑94 (MQ=60)
AAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCA > SRR4302536.1384076/1‑94 (MQ=60)
GTATTGCCGATGAATGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAA < SRR4302536.6348351/94‑1 (MQ=60)
GTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAA > SRR4302536.30672/1‑94 (MQ=60)
TATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAA > SRR4302536.5249858/1‑94 (MQ=60)
TATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAA > SRR4302536.178827/1‑94 (MQ=60)
TATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAA > SRR4302536.4883386/1‑94 (MQ=60)
ATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAAC > SRR4302536.2663373/1‑94 (MQ=60)
TGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTC < SRR4302536.511901/94‑1 (MQ=60)
TGCAGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTC < SRR4302536.1381315/94‑1 (MQ=60)
GCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCA > SRR4302536.6141705/1‑94 (MQ=60)
CGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACC > SRR4302536.2564959/1‑94 (MQ=60)
CGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACC > SRR4302536.2028554/1‑94 (MQ=60)
ATGAACGGCGGCGGCGGGGCGAAACGGAAGTCAATCTTCGCGGAGGGAGCCGTGCTGGCGATACGCCTGCACAGGGACGCAGCAAACTCACACG > SRR4302536.1719625/1‑94 (MQ=60)
ATGAACGACGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCG > SRR4302536.5724957/1‑94 (MQ=60)
TGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGT < SRR4302536.2499207/94‑1 (MQ=60)
TGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGT > SRR4302536.6465350/1‑94 (MQ=60)
tcggcgtctGCGCGGCGGAACGGAACTCGATCTTCTCGTAGGGATCCTTGCTGCCGATACGCCTGCACAGGAACGCAGCAACCTCGCCCGTAAT < SRR4302536.820753/85‑1 (MQ=37)
ACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAAT < SRR4302536.1158812/94‑1 (MQ=60)
ACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAAT > SRR4302536.4930545/1‑94 (MQ=60)
CGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGG > SRR4302536.1284870/1‑94 (MQ=60)
CGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGG < SRR4302536.6137863/94‑1 (MQ=60)
GGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGA > SRR4302536.4923058/1‑94 (MQ=60)
GCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGAT > SRR4302536.343734/1‑94 (MQ=60)
CGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATA < SRR4302536.4576358/94‑1 (MQ=60)
GCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATAT < SRR4302536.70944/94‑1 (MQ=60)
GCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATAT < SRR4302536.4376107/94‑1 (MQ=60)
CGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATT < SRR4302536.3322607/94‑1 (MQ=60)
CGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATT > SRR4302536.1072956/1‑94 (MQ=60)
CGGCGAAACGGAAGTCAATATTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATTCGCCGGATATT > SRR4302536.867103/1‑94 (MQ=60)
GGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTC < SRR4302536.1573515/94‑1 (MQ=60)
GGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTC > SRR4302536.1460804/1‑94 (MQ=60)
CGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCGCAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTG < SRR4302536.1615203/94‑1 (MQ=60)
GAAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGA < SRR4302536.6345478/94‑1 (MQ=60)
AAACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGAT < SRR4302536.3653856/94‑1 (MQ=60)
ACGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCA > SRR4302536.5267465/1‑94 (MQ=60)
CGGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCAC > SRR4302536.2032595/1‑94 (MQ=60)
GGAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACC > SRR4302536.1035853/1‑94 (MQ=60)
GAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCA > SRR4302536.487560/1‑94 (MQ=60)
GAAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCA > SRR4302536.6407401/1‑94 (MQ=60)
AAGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCAC > SRR4302536.2014281/1‑94 (MQ=60)
AGTCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACA < SRR4302536.5788599/94‑1 (MQ=60)
TCAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCACACTCACCCGTAATCCGCCGGATATTCTGATCACCACCCC > SRR4302536.1444572/1‑94 (MQ=60)
tagTCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACGCCC < SRR4302536.1636517/91‑1 (MQ=60)
CAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCC > SRR4302536.6577935/1‑94 (MQ=60)
CAATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCC > SRR4302536.3910223/1‑94 (MQ=60)
AATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCG > SRR4302536.101059/1‑94 (MQ=60)
AATCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCG > SRR4302536.426568/1‑94 (MQ=60)
TCTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAA > SRR4302536.3467897/1‑94 (MQ=60)
CTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAAT > SRR4302536.373554/1‑94 (MQ=60)
CTTCGCGTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATACGCCGGATATTCTGATCACCACACCCGAAT > SRR4302536.496993/1‑94 (MQ=60)
GCGTAGGGATCCGTGCTGGCGATACGCTTGCACAGGAACGCAGCAAACTCGCCCGTATTCCGCCGGATATTCTGATCACCACACCCGAATCACT < SRR4302536.338548/94‑1 (MQ=60)
GTAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCT < SRR4302536.425713/94‑1 (MQ=60)
TAGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTA > SRR4302536.1456804/1‑94 (MQ=60)
AGGGATCCGTGCTGGCGATACGCCTGCACAGGTACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTAT > SRR4302536.5502191/1‑94 (MQ=60)
AGGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTAT > SRR4302536.1064219/1‑94 (MQ=60)
AGGGATCCGTGCTGGAGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCAACACACCCGAATCACTCTAT > SRR4302536.1871016/1‑94 (MQ=60)
GGGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATC > SRR4302536.4345873/1‑94 (MQ=60)
GGATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCT > SRR4302536.1909822/1‑94 (MQ=60)
GCATCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCT < SRR4302536.2612071/94‑1 (MQ=60)
TCCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGAT > SRR4302536.3633945/1‑94 (MQ=60)
CCGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATG < SRR4302536.6692442/94‑1 (MQ=60)
CGTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATGC > SRR4302536.1947687/1‑94 (MQ=60)
GTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATGCT < SRR4302536.2471949/94‑1 (MQ=60)
GTGCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATGCT < SRR4302536.1068753/94‑1 (MQ=60)
GCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATGCTGA < SRR4302536.2499605/94‑1 (MQ=60)
GCTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATGCTGA > SRR4302536.5442256/1‑94 (MQ=60)
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GTTCAGCGCAACTTGCAGATCCCGTTGAAGGGTATTGCCGATGAACGGCGGCGGCGCGGCGAAACGGAAGTCAATCTTCGCGTAGGGATCCGTACTGGCGATACGCCTGCACAGGAACGCAGCAAACTCACCCGTAATCCGCCGGATATTCTGATCACCACACCCGAATCACTCTATCTGATGCTGA > NC_000913/1727411‑1727597
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
