Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,748,779 |
(A)6→7 |
coding (310/720 nt) |
b1671 ← |
putative oxidoreductase Fe‑S subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,748,773 | 1 | . | A | 99.5%
| 757.5
/ ‑3.6
| 201 | coding (316/720 nt) | b1671 | putative oxidoreductase Fe‑S subunit |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base A (79/121); total (79/122) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.56e-01 |
Only 100 of 233 total aligned reads displayed.
TACCCGCACGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑AAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTT > NC_000913/1748681‑1748860
|
tACCCGCACGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCg > 1:1604255/1‑93 (MQ=255)
cccGCACGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCN‑aa > 2:3611625/1‑93 (MQ=255)
cccGCACGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑aa < 1:3288036/93‑1 (MQ=255)
cccGCACGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑aa > 1:5132763/1‑93 (MQ=255)
cccGCACGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑aa > 2:3219692/1‑93 (MQ=255)
cGCACGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑aaaa > 2:6081250/1‑93 (MQ=255)
gCACGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑aaaaa > 2:1033551/1‑93 (MQ=255)
aCGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑aaaaaaa > 1:6445813/1‑92 (MQ=255)
aCGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑aaaaaaa < 1:448296/93‑2 (MQ=255)
agATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑aaaaaaag < 2:5055571/92‑3 (MQ=255)
gATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑aaaaaaagt < 2:419138/93‑4 (MQ=255)
gATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑aaaaaaagt < 1:3506563/93‑4 (MQ=255)
caTCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑aaaaaaagt < 1:6210835/92‑4 (MQ=255)
aTCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑aaaaaaagtg > 1:249999/1‑89 (MQ=255)
ccccTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGAt > 2:2594026/1‑93 (MQ=255)
ccccTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATAACTGGCGAAAAAAA‑GTGAt < 2:3737428/93‑1 (MQ=255)
cccTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATa > 1:428338/1‑93 (MQ=255)
cccTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATa < 2:4492244/93‑1 (MQ=255)
ccTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATAc < 1:3362957/93‑1 (MQ=255)
cTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACt > 2:6435339/1‑93 (MQ=255)
cTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACt > 2:3942651/1‑93 (MQ=255)
tGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTg > 1:2673314/1‑93 (MQ=255)
gCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGc < 2:5596828/93‑1 (MQ=255)
gCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGc < 2:314316/93‑1 (MQ=255)
tcatcaCGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGt > 2:1478869/1‑93 (MQ=255)
catcaCGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGtt > 2:4051114/1‑93 (MQ=255)
atcaCGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGttt < 2:5673549/93‑1 (MQ=255)
atcaCGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GCGATACTGCGttt > 1:5006851/1‑93 (MQ=255)
tcaCGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTc < 2:2958043/93‑1 (MQ=255)
tcaCGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTc > 1:2136880/1‑93 (MQ=255)
aCGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGt < 2:2204421/93‑1 (MQ=255)
cGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGtt < 1:892562/93‑1 (MQ=255)
cACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTc < 1:3958351/93‑1 (MQ=255)
acgacgCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCg > 2:5800281/1‑93 (MQ=255)
acgacgCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCg > 1:1531837/1‑93 (MQ=255)
acgacgCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCg > 1:2853299/1‑93 (MQ=255)
cgacgCCCCCGTCGGGCAAACGTCGTTGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑AAAAAACGGGATACTGCGTTTTGTTGTCGt > 1:1374711/1‑93 (MQ=255)
cgacgCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGt < 1:4513353/93‑1 (MQ=255)
gacgCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGtt < 1:1871556/93‑1 (MQ=255)
gacgCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGtt < 1:3614914/93‑1 (MQ=255)
acgCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTa < 2:2860694/93‑1 (MQ=255)
acgCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTa < 2:1548217/93‑1 (MQ=255)
acccccccGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTa < 2:4961900/90‑1 (MQ=255)
cgCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTAt > 1:811947/1‑93 (MQ=255)
gCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATc < 2:4616563/93‑1 (MQ=255)
cccGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGt < 1:674416/93‑1 (MQ=255)
cGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGa < 2:3825362/93‑1 (MQ=255)
cGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTg < 2:6115222/93‑1 (MQ=255)
gCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGaa < 1:2029247/93‑1 (MQ=255)
cAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAAt < 2:5530971/93‑1 (MQ=255)
aaaCGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAAtg < 2:2710883/93‑1 (MQ=255)
aaaCGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAAtg < 1:2719930/93‑1 (MQ=255)
aaaCGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAAtg > 1:2338999/1‑93 (MQ=255)
aaaCGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAAtg < 2:2383990/93‑1 (MQ=255)
aaCGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAAtgt > 1:1984669/1‑93 (MQ=255)
aaCGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAAtgt < 1:1248493/93‑1 (MQ=255)
aaCGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAAtgg > 1:6499829/1‑92 (MQ=255)
aaCGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAAtgg > 1:5666421/1‑92 (MQ=255)
aCGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAAtgtg > 2:3062269/1‑93 (MQ=255)
cGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAAtgtgt < 1:404934/93‑1 (MQ=255)
gATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTa < 2:72934/93‑1 (MQ=255)
gATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGAGTGCTa > 1:5222549/1‑93 (MQ=255)
cACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGa < 2:3888020/93‑1 (MQ=255)
aCGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGAt < 2:4882438/93‑1 (MQ=255)
gAGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATaaa > 1:1061663/1‑93 (MQ=255)
aGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAAc < 2:1694362/93‑1 (MQ=255)
aGCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAAc > 2:540170/1‑93 (MQ=255)
gCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACg < 2:1201561/93‑1 (MQ=255)
gCATCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACg < 1:6382589/93‑1 (MQ=255)
aTCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGc > 2:1973652/1‑93 (MQ=255)
aTCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGc > 1:4568631/1‑93 (MQ=255)
tCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCt < 2:596634/93‑1 (MQ=255)
tCTTCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCt > 1:3210546/1‑93 (MQ=255)
ttCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTc > 1:2240517/1‑93 (MQ=255)
ttCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTc > 2:3773420/1‑93 (MQ=255)
tCGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTcc < 2:1167141/93‑1 (MQ=255)
tCGCAGTGCTGACATGACTGGCGAAAAAAA‑GGGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTcc > 1:5499672/1‑93 (MQ=255)
cGCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTccc < 2:3273684/93‑1 (MQ=255)
gCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCt < 1:5871246/93‑1 (MQ=255)
gCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCt > 1:5954722/1‑93 (MQ=255)
gCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCt > 1:6656182/1‑93 (MQ=255)
gCAGTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCt < 2:5363468/93‑1 (MQ=255)
gTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAg > 2:5014952/1‑93 (MQ=255)
gTGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGCTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAg > 2:6729833/1‑93 (MQ=255)
tGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGc < 2:3117201/93‑1 (MQ=255)
tGCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGc < 2:1265315/93‑1 (MQ=255)
tGCTGACATGACTGGCG‑AAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCg < 2:6561343/93‑1 (MQ=255)
gCTGACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCg < 2:477420/93‑1 (MQ=255)
gACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCgggg < 1:3747312/93‑1 (MQ=255)
gACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCgggg > 1:3050628/1‑93 (MQ=255)
gACATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCgggg > 2:6289296/1‑93 (MQ=255)
cATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGAc < 1:120971/93‑1 (MQ=255)
cATGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGAc < 1:5407029/93‑1 (MQ=255)
aTGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACg > 2:3402664/1‑93 (MQ=255)
aTGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACg > 2:2116588/1‑93 (MQ=255)
aTGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACg > 1:5546189/1‑93 (MQ=255)
tGACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGt < 2:2750723/93‑1 (MQ=255)
gACTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTg < 1:1734059/93‑1 (MQ=255)
cTGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGt < 2:763542/93‑1 (MQ=255)
tGGCGAAAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGtt < 1:2597760/93‑1 (MQ=255)
|
TACCCGCACGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑AAAAAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTT > NC_000913/1748681‑1748860
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑AAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAGTTTTACGGCA > NC_000913/1748687‑1748872
|
CACGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑AAA‑AAA‑A > SRR4302536.6638391/1‑94 (MQ=60)
ACGATCCCCTGCTCCTCTCGCCATGACTCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGTTGCCATGACTGGCG‑AAATAAA‑G < SRR4302536.1720106/94‑1 (MQ=60)
ACGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑AAA‑AAAag < SRR4302536.460076/94‑3 (MQ=60)
CGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑AAA‑AAAagt < SRR4302536.4638481/94‑4 (MQ=60)
CGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑AAA‑AAAagt < SRR4302536.1528709/94‑4 (MQ=60)
GATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTG < SRR4302536.3611214/94‑1 (MQ=60)
GATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTG > SRR4302536.567146/1‑94 (MQ=60)
GATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTG > SRR4302536.5904663/1‑94 (MQ=60)
GATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTG > SRR4302536.256674/1‑94 (MQ=60)
CATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTG < SRR4302536.6395880/94‑1 (MQ=60)
CCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATA > SRR4302536.439614/1‑94 (MQ=60)
CCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACT > SRR4302536.517471/1‑94 (MQ=60)
CCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACT < SRR4302536.3462829/94‑1 (MQ=60)
CCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACT < SRR4302536.1837389/94‑1 (MQ=60)
CCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACT < SRR4302536.6685201/94‑1 (MQ=60)
CTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTG > SRR4302536.2753232/1‑94 (MQ=60)
CTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTG < SRR4302536.269007/94‑1 (MQ=60)
TGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGC < SRR4302536.2951372/94‑1 (MQ=60)
GCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCG < SRR4302536.4067098/94‑1 (MQ=60)
CATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GCGATACTGCGTTT > SRR4302536.5157046/1‑94 (MQ=60)
ATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTC < SRR4302536.1280448/94‑1 (MQ=60)
ATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTC > SRR4302536.2201006/1‑94 (MQ=60)
ACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTT < SRR4302536.2791882/94‑1 (MQ=60)
CGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTG < SRR4302536.2016520/94‑1 (MQ=60)
CGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTG < SRR4302536.918855/94‑1 (MQ=60)
CGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTG < SRR4302536.630893/94‑1 (MQ=60)
GCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGT > SRR4302536.3406532/1‑94 (MQ=60)
CCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTC < SRR4302536.4064260/94‑1 (MQ=60)
CCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTC < SRR4302536.6607923/94‑1 (MQ=60)
CACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCG < SRR4302536.4075897/94‑1 (MQ=60)
CACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCG > SRR4302536.1576905/1‑94 (MQ=60)
CACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCG > SRR4302536.2937644/1‑94 (MQ=60)
ACGACGCCCCCGTCGGGCAAACGTCGTTGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑AAA‑AAACGGGATACTGCGTTTTGTTGTCGT > SRR4302536.1415670/1‑94 (MQ=60)
ACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCCGAGTGGTGACATGACTGGCGCAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGT > SRR4302536.2499611/1‑94 (MQ=60)
CGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTT < SRR4302536.4648730/94‑1 (MQ=60)
GACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTTGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GGGATACTGCGTTTCGTTGTCGTTA > SRR4302536.3546137/1‑94 (MQ=60)
GACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTA < SRR4302536.3722980/94‑1 (MQ=60)
GACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTA < SRR4302536.1927884/94‑1 (MQ=60)
ACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTAT > SRR4302536.835765/1‑94 (MQ=60)
ACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTAT > SRR4302536.1897514/1‑94 (MQ=60)
CGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATC < SRR4302536.5303682/94‑1 (MQ=60)
CGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATC < SRR4302536.3582212/94‑1 (MQ=60)
CGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GGGATACTGCGTTTCGTTGTCGTTATC > SRR4302536.5146800/1‑94 (MQ=60)
CCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTG < SRR4302536.694154/94‑1 (MQ=60)
CCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTG < SRR4302536.6727476/94‑1 (MQ=60)
CCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGA < SRR4302536.4683484/94‑1 (MQ=60)
GCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAAT < SRR4302536.3279050/94‑1 (MQ=60)
GCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAAT < SRR4302536.6110344/94‑1 (MQ=60)
GCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAAT < SRR4302536.2090343/94‑1 (MQ=60)
CAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATG > SRR4302536.2409959/1‑94 (MQ=60)
CAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATG < SRR4302536.5442124/94‑1 (MQ=60)
AAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGT < SRR4302536.4164428/94‑1 (MQ=60)
AAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGT > SRR4302536.6176064/1‑94 (MQ=60)
AAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGT > SRR4302536.2044364/1‑94 (MQ=60)
AAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGT < SRR4302536.2801062/94‑1 (MQ=60)
AAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGG > SRR4302536.5834848/1‑94 (MQ=60)
AAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGG > SRR4302536.6693563/1‑94 (MQ=60)
AACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTG < SRR4302536.2565125/94‑1 (MQ=60)
AACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTG < SRR4302536.1285975/94‑1 (MQ=60)
AACGGCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTG < SRR4302536.5602371/94‑1 (MQ=60)
CGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTG < SRR4302536.2278214/94‑1 (MQ=60)
CGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTG < SRR4302536.415622/94‑1 (MQ=60)
TCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCT < SRR4302536.6481234/94‑1 (MQ=60)
CGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTA < SRR4302536.759588/94‑1 (MQ=60)
CGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCCA > SRR4302536.2142217/1‑94 (MQ=60)
CGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGAGTGCTA > SRR4302536.5378162/1‑94 (MQ=60)
ATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATC > SRR4302536.2673439/1‑94 (MQ=60)
CACGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGAT > SRR4302536.1419156/1‑94 (MQ=60)
CGGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAA > SRR4302536.1614430/1‑94 (MQ=60)
GGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAA > SRR4302536.1093417/1‑94 (MQ=60)
GGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAA < SRR4302536.3831890/94‑1 (MQ=60)
GGAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAA > SRR4302536.2772064/1‑94 (MQ=60)
GAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAAC > SRR4302536.2869286/1‑94 (MQ=60)
GAGCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAAC < SRR4302536.2046031/94‑1 (MQ=60)
GCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGG < SRR4302536.6572962/94‑1 (MQ=60)
GCATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGGGACTGGAATGTGTGCTATCGATAAACGG > SRR4302536.1305454/1‑94 (MQ=60)
CATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGC > SRR4302536.3707538/1‑94 (MQ=60)
CATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGC > SRR4302536.4705726/1‑94 (MQ=60)
ATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCT < SRR4302536.1130824/94‑1 (MQ=60)
ATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCT > SRR4302536.3304715/1‑94 (MQ=60)
ATCTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCT < SRR4302536.4533570/94‑1 (MQ=60)
CTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTC > SRR4302536.968523/1‑94 (MQ=60)
CTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTC > SRR4302536.2308318/1‑94 (MQ=60)
CTTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTC > SRR4302536.4273356/1‑94 (MQ=60)
TTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCC < SRR4302536.5824856/94‑1 (MQ=60)
TTCGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GGGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCC > SRR4302536.5663763/1‑94 (MQ=60)
CGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCT > SRR4302536.6132142/1‑94 (MQ=60)
CGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCT < SRR4302536.5773822/94‑1 (MQ=60)
CGCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCT > SRR4302536.6854006/1‑94 (MQ=60)
GCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTG > SRR4302536.2102252/1‑94 (MQ=60)
GCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTG < SRR4302536.6046185/94‑1 (MQ=60)
GCAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTG < SRR4302536.3378414/94‑1 (MQ=60)
CAGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTTA > SRR4302536.4490443/1‑94 (MQ=60)
AGTGCTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAG < SRR4302536.6892730/94‑1 (MQ=60)
GCTGACATGACTTGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGG < SRR4302536.3020117/94‑1 (MQ=60)
CTGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGG < SRR4302536.1709529/94‑1 (MQ=60)
TGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGG < SRR4302536.5468684/94‑1 (MQ=60)
TGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGG < SRR4302536.2422845/94‑1 (MQ=60)
TGACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGG > SRR4302536.3140225/1‑94 (MQ=60)
GACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGA < SRR4302536.3859325/94‑1 (MQ=60)
GACATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGA > SRR4302536.3261450/1‑94 (MQ=60)
CATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACG > SRR4302536.4901408/1‑94 (MQ=60)
CATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACG < SRR4302536.124160/94‑1 (MQ=60)
CATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACG < SRR4302536.5568596/94‑1 (MQ=60)
CATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACG > SRR4302536.5711443/1‑94 (MQ=60)
ATGACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGT > SRR4302536.6643358/1‑94 (MQ=60)
GACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGG < SRR4302536.905535/94‑1 (MQ=60)
GACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGG < SRR4302536.1784083/94‑1 (MQ=60)
ACTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGT < SRR4302536.749029/94‑1 (MQ=60)
CTGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTAGTT > SRR4302536.3436332/1‑94 (MQ=60)
cggcgaAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTA < SRR4302536.604647/88‑1 (MQ=60)
TGGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTA < SRR4302536.2675779/94‑1 (MQ=60)
GGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAG > SRR4302536.1322276/1‑94 (MQ=60)
GGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAG < SRR4302536.5253653/94‑1 (MQ=60)
GGCGAAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAG < SRR4302536.679752/94‑1 (MQ=60)
cgaAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAGTT > SRR4302536.4561392/4‑94 (MQ=60)
cgaAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAGTT > SRR4302536.6387204/4‑94 (MQ=60)
cgaAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAGTT > SRR4302536.64074/4‑94 (MQ=60)
cgaAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAGCT > SRR4302536.4177228/4‑94 (MQ=60)
gaAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAGTTT < SRR4302536.6854285/92‑1 (MQ=60)
gaAAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAGTTT > SRR4302536.1730211/3‑94 (MQ=60)
A‑AAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAGTTTT < SRR4302536.4590456/94‑1 (MQ=60)
AAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAGTTTTA < SRR4302536.6360795/94‑1 (MQ=60)
AAA‑AAA‑GTGATACGGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACCTGGTTAGTTTTA > SRR4302536.3375568/1‑94 (MQ=60)
AA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAGTTTTAC > SRR4302536.4958791/1‑94 (MQ=60)
A‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGAGGTTAGTTTTACG > SRR4302536.1873900/1‑94 (MQ=60)
AAA‑GTGATACTGCGTTTCGTTGTCGTTAGCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAGTTTTACGG < SRR4302536.3329951/94‑1 (MQ=60)
A‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAGTTTTACGGCA > SRR4302536.5913996/1‑94 (MQ=60)
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CACGATCCCCTGCTCATCACGCCACGACGCCCCCGTCGGGCAAACGTCGATGCACGGAGCATCTTCGCAGTGCTGACATGACTGGCG‑AAA‑AAA‑GTGATACTGCGTTTCGTTGTCGTTATCGGTGACTGGAATGTGTGCTATCGATAAACGGCTTCCCTGAGCGGGGACGTGGTTAGTTTTACGGCA > NC_000913/1748687‑1748872
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
