Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,787,410 |
A→G |
T318A (ACT→GCT) |
aroH → |
3‑deoxy‑D‑arabinoheptulosonate‑7‑phosphate synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,787,410 | 0 | A | G | 99.3%
| 473.9
/ ‑4.5
| 148 | T318A (ACT→GCT) | aroH | 3‑deoxy‑D‑arabinoheptulosonate‑7‑phosphate synthase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (52/95); total (53/95) |
| Fisher's exact test for biased strand distribution p-value = 3.58e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.48e-01 |
Only 100 of 153 total aligned reads displayed.
ATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGC > NC_000913/1787320‑1787499
|
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct > 2:5174900/1‑93 (MQ=255)
aTCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCcgctcgct < 2:2403102/93‑1 (MQ=255)
tCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCtt > 2:5479475/1‑93 (MQ=255)
ccGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTa < 1:4578306/93‑1 (MQ=255)
cGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTAc > 2:6065326/1‑93 (MQ=255)
gCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACg < 2:1561242/93‑1 (MQ=255)
gCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACg > 2:151769/1‑93 (MQ=255)
gCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACg > 2:5898857/1‑93 (MQ=255)
gCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGAAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACg < 2:6297682/93‑1 (MQ=255)
aTGGCTTTACGGCTATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACTCAAAAAATCGTCGGCAGCCAGCCGCTCGCTTACGGTc < 1:6477763/93‑1 (MQ=255)
ggCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCaa < 2:1074360/93‑1 (MQ=255)
gCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAAt > 2:5355220/1‑93 (MQ=255)
gCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAAt < 1:2938127/93‑1 (MQ=255)
ctctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATc < 2:3142661/93‑1 (MQ=255)
tctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATcc > 2:351929/1‑93 (MQ=255)
tctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATcc > 1:2324747/1‑93 (MQ=255)
ctACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCa > 1:6123883/1‑93 (MQ=255)
tACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCAt < 1:6432947/93‑1 (MQ=255)
cGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTa < 2:2101253/93‑1 (MQ=255)
cGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTa < 2:6169800/93‑1 (MQ=255)
gCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAcc < 2:4247025/93‑1 (MQ=255)
gCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAcc > 1:561546/1‑93 (MQ=255)
aTTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGAc > 2:5050429/1‑93 (MQ=255)
aTTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGAc > 2:4548230/1‑93 (MQ=255)
aTTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGAc > 2:1646559/1‑93 (MQ=255)
ttGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGAcc > 2:2327990/1‑93 (MQ=255)
ttGCTGGAATTATGGCCGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGAcc < 2:5437818/93‑1 (MQ=255)
gCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCg < 2:5827032/93‑1 (MQ=255)
cTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgt > 2:1363202/1‑93 (MQ=255)
tGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCgtg > 1:5215955/1‑93 (MQ=255)
gAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTc < 1:3356428/93‑1 (MQ=255)
aTTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctg > 2:271882/1‑93 (MQ=255)
aTTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctg > 1:2519813/1‑93 (MQ=255)
ttATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgg < 1:6150589/93‑1 (MQ=255)
ttATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgg > 1:1121245/1‑93 (MQ=255)
ttATGGCGAAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgg < 1:2739309/93‑1 (MQ=255)
aTGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggc > 1:4888762/1‑93 (MQ=255)
aTGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggc < 1:4005297/93‑1 (MQ=255)
aTGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggc < 1:4672765/93‑1 (MQ=255)
aTGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggc < 1:1761518/93‑1 (MQ=255)
aTGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggc > 2:5892554/1‑93 (MQ=255)
aTGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggc > 1:3001107/1‑93 (MQ=255)
aTGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggc < 2:347154/93‑1 (MQ=255)
aTGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggc > 1:3523907/1‑93 (MQ=255)
tGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggct > 1:3467293/1‑93 (MQ=255)
ggCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggctg < 1:4694445/93‑1 (MQ=255)
cGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTctgggctggg < 2:5872009/93‑1 (MQ=255)
ggAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGgga < 2:4596137/93‑1 (MQ=255)
ggAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGgga > 1:1652504/1‑93 (MQ=255)
gAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGCCCCGTGTCTGGGCTGggag < 1:1970866/93‑1 (MQ=255)
aaGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGggagga > 1:2957230/1‑93 (MQ=255)
aaGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGggagga < 2:5739347/93‑1 (MQ=255)
gTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATa > 1:1424432/1‑93 (MQ=255)
tttCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATAc > 2:2273136/1‑93 (MQ=255)
ttCTTGCGCGAGGAAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATAcc < 1:69278/93‑1 (MQ=255)
ccTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGa > 1:2397896/1‑93 (MQ=255)
ccTGCGCGAAGCAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGa < 1:39414/93‑1 (MQ=255)
cTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGaa < 2:3094334/93‑1 (MQ=255)
cTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGaa < 2:2773044/93‑1 (MQ=255)
tGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAAc < 2:4161109/93‑1 (MQ=255)
tGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAAc < 1:1891416/93‑1 (MQ=255)
gcgAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGcc > 2:5876279/1‑93 (MQ=255)
gAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTg > 1:3589068/1‑93 (MQ=255)
gAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTg > 1:199569/1‑93 (MQ=255)
cggAACGCAAGAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCGATCCATTGCCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGt < 2:6733760/92‑1 (MQ=255)
aGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGt < 2:1709771/93‑1 (MQ=255)
aGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGt > 1:438100/1‑93 (MQ=255)
aGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGt > 1:483564/1‑93 (MQ=255)
cgAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTc > 1:3322850/2‑93 (MQ=255)
gAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCg < 1:3836064/93‑1 (MQ=255)
aaCGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGa < 1:3795575/93‑1 (MQ=255)
aaCGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGa < 1:135986/93‑1 (MQ=255)
cAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGaaaaa > 2:1361905/1‑93 (MQ=255)
cAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGaaaaa < 1:3186324/93‑1 (MQ=255)
aaaaaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGaaaaa < 2:5239774/92‑1 (MQ=255)
aaaaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCACTCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAAc < 2:5021912/93‑1 (MQ=255)
aaaaaaTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAAc < 2:4303253/93‑1 (MQ=255)
agtcgtcgGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGc < 2:4653786/91‑1 (MQ=255)
aTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGcc < 1:5890032/93‑1 (MQ=255)
aTCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGcc < 1:3605677/93‑1 (MQ=255)
tcgtcgGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCct < 2:2060481/93‑1 (MQ=255)
cgtcgGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCctc < 1:6359996/93‑1 (MQ=255)
cgtcgGCAGTCAGCCCCTCGCTTAGGGTCATTCCATTACCGACCCGTGTCGGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCctc < 1:23785/93‑1 (MQ=255)
cgGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGc < 2:604553/93‑1 (MQ=255)
cAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGt < 1:4919912/93‑1 (MQ=255)
cAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGt < 1:4842434/93‑1 (MQ=255)
aGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAATCTCGCCTCTGCGGTa < 1:4218924/93‑1 (MQ=255)
gTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAg > 1:871200/1‑93 (MQ=255)
gTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAg > 1:4578470/1‑93 (MQ=255)
gTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAg > 1:3189179/1‑93 (MQ=255)
tCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGa < 1:957685/93‑1 (MQ=255)
tCAGCCGCTCGCTTACGATCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGa < 1:5947945/93‑1 (MQ=255)
cAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGAt < 2:2449515/93‑1 (MQ=255)
cAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGAt < 1:271399/93‑1 (MQ=255)
ccGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAcc < 1:4400901/93‑1 (MQ=255)
ccGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAcc < 2:2559877/93‑1 (MQ=255)
cgctcgctTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATAccc > 1:2765503/1‑93 (MQ=255)
cTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGc > 1:2187514/1‑93 (MQ=255)
cTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGc > 1:1889288/1‑93 (MQ=255)
cTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGc < 1:1175001/93‑1 (MQ=255)
|
ATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGC > NC_000913/1787320‑1787499
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTCT > NC_000913/1787317‑1787503
|
CAAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCG > SRR4302536.3746031/1‑94 (MQ=60)
AAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGC > SRR4302536.4553794/1‑94 (MQ=60)
ATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTT > SRR4302536.2237022/1‑94 (MQ=60)
TCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTA < SRR4302536.6594022/94‑1 (MQ=60)
CCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTAC < SRR4302536.4715743/94‑1 (MQ=60)
GCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGG > SRR4302536.5019196/1‑94 (MQ=60)
AATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTC > SRR4302536.5302837/1‑94 (MQ=60)
AATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTC < SRR4302536.4139335/94‑1 (MQ=60)
ATGGCTTTACGGCTATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACTCAAAAAATCGTCGGCAGCCAGCCGCTCGCTTACGGTCA < SRR4302536.6671036/94‑1 (MQ=60)
TGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAA > SRR4302536.2426447/1‑94 (MQ=60)
GCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATC < SRR4302536.3024797/94‑1 (MQ=60)
CTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCC > SRR4302536.2395296/1‑94 (MQ=60)
TCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCA > SRR4302536.6306388/1‑94 (MQ=60)
TACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATT < SRR4302536.6625213/94‑1 (MQ=60)
CGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTAC < SRR4302536.2814378/94‑1 (MQ=60)
GGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACC > SRR4302536.575860/1‑94 (MQ=60)
CTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTG > SRR4302536.5371396/1‑94 (MQ=60)
GGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTC > SRR4302536.6266407/1‑94 (MQ=60)
GAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCT < SRR4302536.3456050/94‑1 (MQ=60)
GAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCT < SRR4302536.6869911/94‑1 (MQ=60)
AATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTG < SRR4302536.165244/94‑1 (MQ=60)
AATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTG > SRR4302536.2595778/1‑94 (MQ=60)
ATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGG > SRR4302536.1154919/1‑94 (MQ=60)
TTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGG < SRR4302536.6333835/94‑1 (MQ=60)
TTATGGCGAAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGG < SRR4302536.2820923/94‑1 (MQ=60)
TATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGC > SRR4302536.3629194/1‑94 (MQ=60)
TATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGC > SRR4302536.3089339/1‑94 (MQ=60)
TATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGC > SRR4302536.5035809/1‑94 (MQ=60)
ATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCT < SRR4302536.4124153/94‑1 (MQ=60)
ATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCT > SRR4302536.3570628/1‑94 (MQ=60)
ATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCT < SRR4302536.4813265/94‑1 (MQ=60)
ATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCT < SRR4302536.1814485/94‑1 (MQ=60)
TGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTG > SRR4302536.1372391/1‑94 (MQ=60)
GGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGG < SRR4302536.3401547/94‑1 (MQ=60)
GGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGG < SRR4302536.4835613/94‑1 (MQ=60)
CGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGG > SRR4302536.2579805/1‑94 (MQ=60)
CGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGA > SRR4302536.1700528/1‑94 (MQ=60)
CGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGA > SRR4302536.3863039/1‑94 (MQ=60)
GGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAG < SRR4302536.3977862/94‑1 (MQ=60)
GAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGCCCCGTGTCTGGGCTGGGAGG < SRR4302536.2030123/94‑1 (MQ=60)
AAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGA > SRR4302536.3044356/1‑94 (MQ=60)
AAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGA > SRR4302536.582331/1‑94 (MQ=60)
AAGTTTCCTGCGCGAAGGAACGAAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGAT < SRR4302536.3569467/94‑1 (MQ=60)
AGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATA > SRR4302536.1466760/1‑94 (MQ=60)
GTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATAC < SRR4302536.4793768/94‑1 (MQ=60)
TTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACC < SRR4302536.3180788/94‑1 (MQ=60)
TTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACC < SRR4302536.1991695/94‑1 (MQ=60)
TTCTTGCGCGAGGAAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCG < SRR4302536.71157/94‑1 (MQ=60)
TCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGA > SRR4302536.2470483/1‑94 (MQ=60)
CCTGCGCGAAGCAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAA < SRR4302536.40514/94‑1 (MQ=60)
TGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACG < SRR4302536.1948298/94‑1 (MQ=60)
CGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTG > SRR4302536.204823/1‑94 (MQ=60)
CGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTG > SRR4302536.3696426/1‑94 (MQ=60)
AAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGT > SRR4302536.449615/1‑94 (MQ=60)
AAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGT > SRR4302536.496128/1‑94 (MQ=60)
ACGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTC > SRR4302536.3421139/1‑94 (MQ=60)
GAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGA < SRR4302536.4712170/94‑1 (MQ=60)
GAACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGA < SRR4302536.3950293/94‑1 (MQ=60)
AACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAA < SRR4302536.3908780/94‑1 (MQ=60)
AACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAA < SRR4302536.139541/94‑1 (MQ=60)
AACGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAA > SRR4302536.961172/1‑94 (MQ=60)
CGCAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAA < SRR4302536.2839876/94‑1 (MQ=60)
CAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAAC < SRR4302536.3279743/94‑1 (MQ=60)
CAAAAAATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAAC < SRR4302536.1911948/94‑1 (MQ=60)
actgcTCGGCATTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCC < SRR4302536.2916592/89‑1 (MQ=60)
ATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCT < SRR4302536.3673757/94‑1 (MQ=60)
ATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCT < SRR4302536.6065435/94‑1 (MQ=60)
ATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCT < SRR4302536.4414905/94‑1 (MQ=60)
ATCGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCT < SRR4302536.3713496/94‑1 (MQ=60)
CGTGGGCAATGAGCCGCTCGATTACGGACAATCCATTACCGACCCGTGTCTGGGGTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCT < SRR4302536.4627168/94‑1 (MQ=60)
CGTCGGCAGTGAGCCGCTCGCTTACGGTCAATCCATCACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCT < SRR4302536.5320242/94‑1 (MQ=60)
CGTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCT < SRR4302536.6549482/94‑1 (MQ=60)
CGTCGGCAGTCAGCCCCTCGCTTAGGGTCATTCCATTACCGACCCGTGTCGGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCT < SRR4302536.24449/94‑1 (MQ=60)
GTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTG < SRR4302536.3032207/94‑1 (MQ=60)
GTCGGCAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTG < SRR4302536.481980/94‑1 (MQ=60)
CAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTA < SRR4302536.5067760/94‑1 (MQ=60)
CAGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTA < SRR4302536.4988165/94‑1 (MQ=60)
AGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAATCTCGCCTCTGCGGTAG < SRR4302536.4344424/94‑1 (MQ=60)
AGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAG > SRR4302536.3282687/1‑94 (MQ=60)
AGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAG > SRR4302536.4715916/1‑94 (MQ=60)
AGTCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAG > SRR4302536.896866/1‑94 (MQ=60)
TCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGAT < SRR4302536.6414926/94‑1 (MQ=60)
TCAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGAT < SRR4302536.985988/94‑1 (MQ=60)
TCAGCCGCTCGCTTACGATCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGAT < SRR4302536.6125140/94‑1 (MQ=60)
CAGCCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATA < SRR4302536.278629/94‑1 (MQ=60)
CCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCC < SRR4302536.4532460/94‑1 (MQ=60)
CCGCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCC > SRR4302536.2847747/1‑94 (MQ=60)
GCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGC > SRR4302536.2253479/1‑94 (MQ=60)
GCTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGC > SRR4302536.1946110/1‑94 (MQ=60)
CTCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCT < SRR4302536.1210364/94‑1 (MQ=60)
TCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTT < SRR4302536.4589830/94‑1 (MQ=60)
TCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTT < SRR4302536.6895101/94‑1 (MQ=60)
TCGCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTT < SRR4302536.882434/94‑1 (MQ=60)
GCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTCT < SRR4302536.4205749/94‑1 (MQ=60)
GCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTCT < SRR4302536.2834443/94‑1 (MQ=60)
GCTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTCT > SRR4302536.749025/1‑94 (MQ=60)
|
CAAATCCGCAATGGCTCTACGGCGATTGCTGGAATTATGGCGGAAAGTTTCCTGCGCGAAGGAACGCAAAAAATCGTCGGCAGTCAGCCGCTCACTTACGGTCAATCCATTACCGACCCGTGTCTGGGCTGGGAGGATACCGAACGCCTGGTCGAAAAACTCGCCTCTGCGGTAGATACCCGCTTCT > NC_000913/1787317‑1787503
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
