Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,791,298 |
T→C |
T95T (ACA→ACG) |
btuD ← |
ATP‑binding component of vitamin B12 transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,791,298 | 0 | T | C | 100.0%
| 767.2
/ NA
| 235 | T95T (ACA→ACG) | btuD | ATP‑binding component of vitamin B12 transport system |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (109/126); total (109/126) |
Only 100 of 243 total aligned reads displayed.
ATTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGTGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCA > NC_000913/1791208‑1791387
|
aTTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAgcgt > 1:3528371/1‑93 (MQ=255)
aTTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAgcgt > 1:2706375/1‑93 (MQ=255)
ttGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTc > 2:1536353/1‑93 (MQ=255)
tGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCa < 2:4721555/93‑1 (MQ=255)
ggTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAg < 2:4014178/93‑1 (MQ=255)
cTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAg < 2:925990/93‑1 (MQ=255)
cTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAg > 1:5082465/1‑93 (MQ=255)
tACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGt < 1:4795716/93‑1 (MQ=255)
tACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGt > 1:4355401/1‑93 (MQ=255)
aCGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTg > 2:2891779/1‑93 (MQ=255)
cGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGc > 2:1972093/1‑93 (MQ=255)
gccGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCa < 2:1898038/92‑1 (MQ=255)
cGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAgc > 2:5283313/1‑92 (MQ=255)
gAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGAc > 1:2587638/1‑93 (MQ=255)
gAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGAc < 2:5549989/93‑1 (MQ=255)
aGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGAcc < 1:288786/93‑1 (MQ=255)
tttGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCgg < 2:1188633/93‑1 (MQ=255)
ttGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGc > 2:5159285/1‑93 (MQ=255)
tGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCg > 2:4251669/1‑93 (MQ=255)
gTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGt < 2:4542952/93‑1 (MQ=255)
gTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGt < 1:1371353/93‑1 (MQ=255)
gTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGt < 1:1020031/93‑1 (MQ=255)
gTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGt < 1:4178161/93‑1 (MQ=255)
tcaAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCa > 1:1604554/1‑93 (MQ=255)
tcaAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCa > 1:2389769/1‑93 (MQ=255)
caAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCaa > 1:3059135/1‑93 (MQ=255)
caAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCaa < 2:3240747/93‑1 (MQ=255)
aaGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCaaa < 2:6060718/93‑1 (MQ=255)
aaGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCaaa < 1:743852/93‑1 (MQ=255)
agagCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAc < 2:6325532/93‑1 (MQ=255)
agagCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAc > 1:644460/1‑93 (MQ=255)
gagCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAcg > 2:4169305/1‑93 (MQ=255)
agCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAcgg < 2:2358297/93‑1 (MQ=255)
gCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAcggc > 1:5930179/1‑93 (MQ=255)
aGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACggcggc > 2:270938/1‑93 (MQ=255)
aGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACggaggc > 2:4962655/1‑93 (MQ=255)
gcgcCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGgcggcg > 1:5679116/1‑93 (MQ=255)
cgcCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCACACGGCGGCGt > 1:6022029/1‑93 (MQ=255)
gcCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTc < 2:4601621/93‑1 (MQ=255)
ccccTGCGTCATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTct > 1:6506725/1‑93 (MQ=255)
cccTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTctg > 2:3262698/1‑93 (MQ=255)
cTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGgctgct > 1:3827441/1‑93 (MQ=255)
cTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTctgct > 2:1858696/1‑93 (MQ=255)
tGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTctgctg < 2:3769663/93‑1 (MQ=255)
gCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCtgt < 2:5631116/93‑1 (MQ=255)
gCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCtgt < 1:4580477/93‑1 (MQ=255)
gCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCtgt < 2:3707781/93‑1 (MQ=255)
atcatTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGa > 1:5169862/1‑93 (MQ=255)
tcatTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGaa < 2:1635915/93‑1 (MQ=255)
tcatTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGaa < 2:3692205/93‑1 (MQ=255)
ttCAGTAGTTGGGTACGCGTTTTATCGTGCTGATGCAGGGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGa < 1:6068730/93‑1 (MQ=255)
ttCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGa < 2:1441432/93‑1 (MQ=255)
ttCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGa < 2:3134605/93‑1 (MQ=255)
ttCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGa > 1:4838829/1‑93 (MQ=255)
tCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGAt < 1:4022434/93‑1 (MQ=255)
agtagtTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAg > 1:2644367/1‑93 (MQ=255)
gtagtTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAgg > 1:5439163/1‑93 (MQ=255)
gtagtTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAgg < 2:2918604/93‑1 (MQ=255)
gtTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGgcgc > 1:4632959/1‑93 (MQ=255)
gtTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGgcgc > 2:2223796/1‑93 (MQ=255)
gtTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCCGCTGTTGTGAAAGATAggggg > 1:4677353/1‑90 (MQ=255)
tCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGa < 2:6590643/93‑1 (MQ=255)
tCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGa < 1:6340616/93‑1 (MQ=255)
tCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGa < 2:1883177/93‑1 (MQ=255)
cGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGAt < 2:5037314/93‑1 (MQ=255)
ggTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATg < 1:3352141/93‑1 (MQ=255)
tACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCa > 1:5538803/1‑93 (MQ=255)
cgcgTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAgc < 1:65495/93‑1 (MQ=255)
gcgTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAgcg < 2:2494206/93‑1 (MQ=255)
gcgTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAgcg > 1:2051945/1‑93 (MQ=255)
cgTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAgcgc < 2:1744844/93‑1 (MQ=255)
cgTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAgcgc > 2:656976/1‑93 (MQ=255)
cgTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAgcgc < 2:6363538/93‑1 (MQ=255)
cgTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAgcgc < 2:2211962/93‑1 (MQ=255)
gTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGcgcg > 2:815388/1‑93 (MQ=255)
gTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGcgcg < 2:4493632/93‑1 (MQ=255)
gTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGcgcg > 1:2150737/1‑93 (MQ=255)
gTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGcgcg < 2:2441822/93‑1 (MQ=255)
ttttATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGa < 2:741533/93‑1 (MQ=255)
ttttATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGa > 1:980417/1‑93 (MQ=255)
ttttATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGa > 2:5431361/1‑93 (MQ=255)
ttttATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGa > 1:19261/1‑93 (MQ=255)
ttATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGt < 2:5507284/93‑1 (MQ=255)
ttATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGt < 2:1165162/93‑1 (MQ=255)
ttATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGt > 2:536143/1‑93 (MQ=255)
caTCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGtt > 2:4883580/2‑93 (MQ=255)
aTCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTATGAAAGATAGGCGCGATGCAGCGCGAGttt < 1:6331728/93‑1 (MQ=255)
tCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGtttt < 2:1096898/93‑1 (MQ=255)
tCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGtttt < 2:2676591/93‑1 (MQ=255)
tCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGtttt < 2:5748379/93‑1 (MQ=255)
tCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGtttt < 2:4855452/93‑1 (MQ=255)
tCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGtttt > 2:6468074/1‑93 (MQ=255)
gTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTttgt > 1:3579081/1‑93 (MQ=255)
tGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTttgtt > 1:3398525/1‑93 (MQ=255)
gCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTttgttg < 1:6199775/93‑1 (MQ=255)
cTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGc > 2:5891956/1‑93 (MQ=255)
gATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCgg < 2:6674094/93‑1 (MQ=255)
aTGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGa < 1:4459711/93‑1 (MQ=255)
tGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGAc > 2:4140128/1‑93 (MQ=255)
gCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGAcc < 2:205068/93‑1 (MQ=255)
|
ATTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGTGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCA > NC_000913/1791208‑1791387
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGTGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCATGCT > NC_000913/1791207‑1791391
|
GATTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGT > SRR4302536.3633798/1‑94 (MQ=60)
GATTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGT > SRR4302536.2787124/1‑94 (MQ=60)
TTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCA < SRR4302536.1115247/94‑1 (MQ=60)
TGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAG > SRR4302536.2196127/1‑94 (MQ=60)
GTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGT < SRR4302536.4791261/94‑1 (MQ=60)
TGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTA < SRR4302536.3304301/94‑1 (MQ=60)
GCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAG > SRR4302536.5234551/1‑94 (MQ=60)
CTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGT > SRR4302536.4485668/1‑94 (MQ=60)
CTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGT > SRR4302536.3282133/1‑94 (MQ=60)
TACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTG < SRR4302536.4940057/94‑1 (MQ=60)
GTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCA > SRR4302536.2962480/1‑94 (MQ=60)
GTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCA < SRR4302536.5669736/94‑1 (MQ=60)
CGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGAC > SRR4302536.2665373/1‑94 (MQ=60)
GAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACC < SRR4302536.5966750/94‑1 (MQ=60)
AGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCG < SRR4302536.296460/94‑1 (MQ=60)
TTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGC < SRR4302536.1982655/94‑1 (MQ=60)
TTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGC < SRR4302536.6214998/94‑1 (MQ=60)
TTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCG < SRR4302536.5131847/94‑1 (MQ=60)
TGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGT > SRR4302536.6643639/1‑94 (MQ=60)
GTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTT < SRR4302536.4302266/94‑1 (MQ=60)
GTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTT < SRR4302536.5331192/94‑1 (MQ=60)
GTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTT > SRR4302536.4210629/1‑94 (MQ=60)
GTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTT < SRR4302536.1412221/94‑1 (MQ=60)
GTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTT < SRR4302536.1050225/94‑1 (MQ=60)
TCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCCGGTAGTGCCAGACCGGCGTTG < SRR4302536.6643879/94‑1 (MQ=60)
TCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTG > SRR4302536.1014572/1‑94 (MQ=60)
ATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCA > SRR4302536.2462113/1‑94 (MQ=60)
ATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCA > SRR4302536.1651370/1‑94 (MQ=60)
TCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAA > SRR4302536.3148918/1‑94 (MQ=60)
TCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGCACGCGCTTTATCGTGCTGCTGCAGCGTCAGGTAGTGCCCGACCGGCGTTGCAA > SRR4302536.832630/1‑94 (MQ=60)
AAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAC > SRR4302536.663450/1‑94 (MQ=60)
AAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAAC < SRR4302536.765692/94‑1 (MQ=60)
AGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGC > SRR4302536.6106831/1‑94 (MQ=60)
AGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGGTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGTCGTTGCAAAAGGC > SRR4302536.6229272/1‑94 (MQ=60)
GCCATCGCCCCCGCGACATCCTTCAGTAGTGCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGGGCCACACCTGCGTTGCAAACGGGG < SRR4302536.421864/94‑1 (MQ=60)
CCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGG > SRR4302536.1011537/1‑94 (MQ=60)
CCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGG < SRR4302536.2542115/94‑1 (MQ=60)
AGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCG > SRR4302536.4633146/1‑94 (MQ=60)
AGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCG > SRR4302536.5847959/1‑94 (MQ=60)
GCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCACACGGCGGCGT > SRR4302536.6201578/1‑94 (MQ=60)
CGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAATCGGCGGCGTC < SRR4302536.5836011/94‑1 (MQ=60)
GCCCCTGCGTCATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCT > SRR4302536.6700642/1‑94 (MQ=60)
GCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCT > SRR4302536.6289385/1‑94 (MQ=60)
GCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCT < SRR4302536.4026122/94‑1 (MQ=60)
GCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCT > SRR4302536.1591920/1‑94 (MQ=60)
GCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACCGCGGCGTCT > SRR4302536.3654329/1‑94 (MQ=60)
CCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTG < SRR4302536.4966210/94‑1 (MQ=60)
CCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCCGACCGGCGTTGCAAACGGCGGCGTCTGCT > SRR4302536.704717/1‑94 (MQ=60)
CCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGGCTGCT > SRR4302536.3941465/1‑94 (MQ=60)
TCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTT < SRR4302536.2788674/94‑1 (MQ=60)
GCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTT < SRR4302536.2348172/94‑1 (MQ=60)
GCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTT < SRR4302536.4717965/94‑1 (MQ=60)
GACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGT > SRR4302536.5811118/1‑94 (MQ=60)
CATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGA > SRR4302536.5324104/1‑94 (MQ=60)
CATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGA < SRR4302536.5147739/94‑1 (MQ=60)
ATCATTCAGTAGGTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTCCCAGACCTGCGTTGCATACGGCGGCGTCTGCTGTTGTGAA > SRR4302536.3334426/1‑94 (MQ=60)
CATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAG > SRR4302536.3047778/1‑94 (MQ=60)
CATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAG < SRR4302536.1947422/94‑1 (MQ=60)
ATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGA > SRR4302536.4984472/1‑94 (MQ=60)
TTCAGTAGTTGGGTACGCGTTTTATCGTGCTGATGCAGGGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGAT < SRR4302536.6249769/94‑1 (MQ=60)
TCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATA < SRR4302536.4387383/94‑1 (MQ=60)
TCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATA < SRR4302536.4141778/94‑1 (MQ=60)
CAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAG < SRR4302536.3485100/94‑1 (MQ=60)
CAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAG > SRR4302536.2723612/1‑94 (MQ=60)
CAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAG < SRR4302536.4859373/94‑1 (MQ=60)
AGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGCAAGATAGG > SRR4302536.3519326/1‑94 (MQ=60)
AGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGG > SRR4302536.5601831/1‑94 (MQ=60)
GTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGC < SRR4302536.2778759/94‑1 (MQ=60)
AGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGG > SRR4302536.5863023/1‑94 (MQ=60)
AGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGC > SRR4302536.4772191/1‑94 (MQ=60)
AGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGC < SRR4302536.6538869/94‑1 (MQ=60)
AGTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCCGCTGTTGTGAAAGATAGGggg > SRR4302536.4818015/1‑91 (MQ=60)
GTTCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCG < SRR4302536.2692551/94‑1 (MQ=60)
TCGGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGAT < SRR4302536.6529489/94‑1 (MQ=60)
GGTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGC < SRR4302536.3451591/94‑1 (MQ=60)
GTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGACAGATAGGCGCGATGCA > SRR4302536.2198896/1‑94 (MQ=60)
GTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCA > SRR4302536.866527/1‑94 (MQ=60)
GTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCA > SRR4302536.5703875/1‑94 (MQ=60)
GTACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCA < SRR4302536.4753656/94‑1 (MQ=60)
TACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAG > SRR4302536.382378/1‑94 (MQ=60)
ACGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGC < SRR4302536.4607725/94‑1 (MQ=60)
CGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCG < SRR4302536.67283/94‑1 (MQ=60)
CGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCG < SRR4302536.6440403/94‑1 (MQ=60)
CGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCG < SRR4302536.4124837/94‑1 (MQ=60)
CGCGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCG > SRR4302536.2113750/1‑94 (MQ=60)
CGTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCG > SRR4302536.2215330/1‑94 (MQ=60)
GTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGA > SRR4302536.19800/1‑94 (MQ=60)
GTTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGA > SRR4302536.1009359/1‑94 (MQ=60)
GTTTTATCGTGCTGATGCAGCGTCAGGTAGTGACAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGA > SRR4302536.250168/1‑94 (MQ=60)
GTTGTATCGCGCGGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGA < SRR4302536.4216493/94‑1 (MQ=60)
TTTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAG < SRR4302536.441332/94‑1 (MQ=60)
TTTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGT > SRR4302536.6398244/1‑94 (MQ=60)
TTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTT < SRR4302536.5289966/94‑1 (MQ=60)
TTATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTT < SRR4302536.4857543/94‑1 (MQ=60)
TATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTT > SRR4302536.349145/1‑94 (MQ=60)
TATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTT < SRR4302536.5507645/94‑1 (MQ=60)
ATCGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTATGAAAGATAGGCGCGATGCAGCGCGAGTTTT < SRR4302536.6520300/94‑1 (MQ=60)
CGTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGT > SRR4302536.3686109/1‑94 (MQ=60)
GTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTT > SRR4302536.3499607/1‑94 (MQ=60)
GTGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTT < SRR4302536.2013216/94‑1 (MQ=60)
TGCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTG < SRR4302536.681294/94‑1 (MQ=60)
GCTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGC < SRR4302536.6384440/94‑1 (MQ=60)
CTGATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCG < SRR4302536.6142804/94‑1 (MQ=60)
ATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGAC < SRR4302536.4593739/94‑1 (MQ=60)
ATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGAC < SRR4302536.4593740/94‑1 (MQ=60)
ATGCAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGAC > SRR4302536.6523349/1‑94 (MQ=60)
CAGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCAT < SRR4302536.671454/94‑1 (MQ=60)
AGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCATG > SRR4302536.3627422/1‑94 (MQ=60)
AGCGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCATG < SRR4302536.2274597/94‑1 (MQ=60)
CGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCATGCT > SRR4302536.6718846/1‑94 (MQ=60)
CGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCATGCT < SRR4302536.2429523/94‑1 (MQ=60)
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GATTGGTGCTACGTCCGAGTTTGTCATCAAGAGCCAGCGCCCCTGCGACATCATTCAGTAGTTCGGTACGCGTTTTATCGTGCTGATGCAGTGTCAGGTAGTGCCAGACCGGCGTTGCAAACGGCGGCGTCTGCTGTTGTGAAAGATAGGCGCGATGCAGCGCGAGTTTTGTTGCGGACCATGCT > NC_000913/1791207‑1791391
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
