Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,895,346 |
G→A |
A131T (GCC→ACC) |
sdaA → |
L‑serine deaminase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,895,346 | 0 | G | A | 100.0%
| 777.1
/ NA
| 214 | A131T (GCC→ACC) | sdaA | L‑serine deaminase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (86/128); total (86/128) |
Only 100 of 217 total aligned reads displayed.
GGACGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGAT > NC_000913/1895256‑1895435
|
aCGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCta < 2:3251915/93‑1 (MQ=255)
cGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCtat < 1:1681606/93‑1 (MQ=255)
cGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCtat > 1:4083870/1‑93 (MQ=255)
cGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCtat < 1:2364124/93‑1 (MQ=255)
ggCATGATGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCtata < 2:4179/93‑1 (MQ=255)
ggCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCtata > 2:4305011/1‑93 (MQ=255)
gCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATaa < 1:631809/93‑1 (MQ=255)
gCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATaa < 2:6685349/93‑1 (MQ=255)
cATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAAc > 2:162777/1‑93 (MQ=255)
cATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAAc < 1:1467647/93‑1 (MQ=255)
aTGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACg > 2:1249408/1‑93 (MQ=255)
tGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACgg > 2:170013/1‑93 (MQ=255)
tGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACgg > 1:4603050/1‑93 (MQ=255)
gTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGAt < 1:4263245/93‑1 (MQ=255)
gTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGAt > 2:4033347/1‑93 (MQ=255)
tGGATTTCCATCGCGACAACGTGATGCGTTTGCATAACGGCAACCTGCCGCTGCATGAAAACGTTATGCAAATCCACACCTATAACGGCGATg < 1:2874209/93‑1 (MQ=255)
ggATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGa < 2:2210763/93‑1 (MQ=255)
ggATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGa < 1:3839758/93‑1 (MQ=255)
aTTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAg < 2:2752463/93‑1 (MQ=255)
aTTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAg < 1:1915199/93‑1 (MQ=255)
tttCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAgt < 1:5500343/93‑1 (MQ=255)
tttCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAgt > 2:2486222/1‑93 (MQ=255)
attCCCGCGCGACACCGAGATGCGTTTTAATAACGCCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAgt < 1:2938938/92‑1 (MQ=255)
tCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAgtcg < 2:1279202/93‑1 (MQ=255)
ccGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAgtcgtc > 1:3733082/1‑93 (MQ=255)
cgcgcgACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCt < 1:3353413/93‑1 (MQ=255)
gcgcgACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTa < 2:4923381/93‑1 (MQ=255)
gcgcgACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTa > 1:1746137/1‑93 (MQ=255)
cgcgACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTAc > 2:2718496/1‑93 (MQ=255)
cgcgACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTAc > 2:6668177/1‑93 (MQ=255)
gcgACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACa < 2:5806408/93‑1 (MQ=255)
gACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGc > 1:5192251/1‑93 (MQ=255)
gACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGc < 2:5967944/93‑1 (MQ=255)
gACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGc < 2:3559566/93‑1 (MQ=255)
cAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCaa < 2:2118133/93‑1 (MQ=255)
cGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAAc < 1:6217284/93‑1 (MQ=255)
cGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAAc < 2:5116539/93‑1 (MQ=255)
cGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAAc < 1:1043658/93‑1 (MQ=255)
aTGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACttat < 1:3883673/93‑1 (MQ=255)
tGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACttatt < 1:1657394/93‑1 (MQ=255)
tGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACttatt < 1:735788/93‑1 (MQ=255)
ttttCATAACGGCACCCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTc < 1:1104258/93‑1 (MQ=255)
ttttCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTc < 2:3417214/93‑1 (MQ=255)
ttttCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTc > 2:2984914/1‑93 (MQ=255)
ttttCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTc < 1:5970212/93‑1 (MQ=255)
ttttCATAACGACAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTc < 1:4609728/93‑1 (MQ=255)
ttCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCa < 2:2917147/93‑1 (MQ=255)
ttCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCa < 1:4932926/93‑1 (MQ=255)
tCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCAt < 1:4473515/93‑1 (MQ=255)
tCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCAt > 2:5845862/1‑93 (MQ=255)
cATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATc < 1:2808217/93‑1 (MQ=255)
cATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATc < 2:1355786/93‑1 (MQ=255)
cATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATc > 2:5649105/1‑93 (MQ=255)
tAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATcgg > 2:2675186/1‑93 (MQ=255)
cGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATcggcgg < 2:80985/93‑1 (MQ=255)
gCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATcggcggcg > 2:758891/1‑93 (MQ=255)
aaCCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGt > 2:2883395/1‑93 (MQ=255)
aCCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATcggcggcgggt > 1:6459173/1‑91 (MQ=255)
aCCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGtt > 2:3911531/1‑93 (MQ=255)
aCCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGtt > 2:309526/1‑93 (MQ=255)
aCCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGtt > 2:6122840/1‑93 (MQ=255)
aCCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGtt > 2:6408917/1‑93 (MQ=255)
aCCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGtt > 1:6641861/1‑93 (MQ=255)
ccTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGttt > 2:4503324/1‑93 (MQ=255)
ccTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGttt < 1:4172739/93‑1 (MQ=255)
ccTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGttt > 1:1832693/1‑93 (MQ=255)
tGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTa < 1:3238547/93‑1 (MQ=255)
gCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTAt < 2:5319410/93‑1 (MQ=255)
gCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTAt < 2:4443854/93‑1 (MQ=255)
ccGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTAtc < 1:1221086/93‑1 (MQ=255)
cGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTAtcg > 1:2103634/1‑93 (MQ=255)
gCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTAtcgt > 2:5580892/1‑93 (MQ=255)
cTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTAtcgtc > 2:5447042/1‑93 (MQ=255)
cTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTAtcgtc < 2:1508670/93‑1 (MQ=255)
aTGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATg < 2:1744914/93‑1 (MQ=255)
aTGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATg < 2:5192501/93‑1 (MQ=255)
gAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATgaa < 2:4007297/93‑1 (MQ=255)
aaaCGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATgaaga < 2:3409467/93‑1 (MQ=255)
aaCGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATgaagaa > 1:2269236/1‑93 (MQ=255)
aaCGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATgaagaa > 2:3649774/1‑93 (MQ=255)
aCGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAac > 1:6042355/1‑93 (MQ=255)
aCGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAac > 1:2692627/1‑93 (MQ=255)
cGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAaca < 1:1566731/93‑1 (MQ=255)
ggTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAacac > 2:4730123/1‑93 (MQ=255)
gTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTCTCGTCGATGAAGAACACt > 2:3168519/1‑93 (MQ=255)
gTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACt < 1:3709626/93‑1 (MQ=255)
tATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACtt < 2:1912525/93‑1 (MQ=255)
tATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACtt > 2:1059972/1‑93 (MQ=255)
tATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACtt < 1:5671922/93‑1 (MQ=255)
tATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACtt < 1:4845175/93‑1 (MQ=255)
tATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACtt < 1:2149435/93‑1 (MQ=255)
tGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTg < 1:5175656/93‑1 (MQ=255)
tGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTg < 2:3710563/93‑1 (MQ=255)
gCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTgg < 1:1367801/93‑1 (MQ=255)
aaaTCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTc < 1:853649/93‑1 (MQ=255)
aaTCCACACCTATAGCGGTGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCa < 1:6190561/93‑1 (MQ=255)
tCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAgg > 2:1812644/1‑93 (MQ=255)
ccACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGa < 1:2243121/93‑1 (MQ=255)
ccACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGa < 1:6543453/93‑1 (MQ=255)
ccACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGa < 1:6129171/93‑1 (MQ=255)
|
GGACGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGAT > NC_000913/1895256‑1895435
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGGGACGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTG > NC_000913/1895253‑1895439
|
CAGGGACGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACA > SRR4302536.487665/1‑94 (MQ=60)
AGGGACGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACAC > SRR4302536.91631/1‑94 (MQ=60)
AGGGACGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACAC > SRR4302536.4422294/1‑94 (MQ=60)
AGGGACGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACAC > SRR4302536.5954112/1‑94 (MQ=60)
GGACGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCT < SRR4302536.6690617/94‑1 (MQ=60)
ACGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTAT > SRR4302536.4204936/1‑94 (MQ=60)
ACGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTAT < SRR4302536.292686/94‑1 (MQ=60)
CGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATA < SRR4302536.2435792/94‑1 (MQ=60)
CGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATA < SRR4302536.1730338/94‑1 (MQ=60)
GGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAA < SRR4302536.4284691/94‑1 (MQ=60)
GGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAA < SRR4302536.6202530/94‑1 (MQ=60)
GCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAAC < SRR4302536.650507/94‑1 (MQ=60)
cataaattgaatttgCCGCGCGACGACGGGCTGTGTTTTTAGAACCGCAACCTGCCGCTGCATGAAAACGGTATTCAAATCCGCGCCTATAACT < SRR4302536.6778889/79‑1 (MQ=35)
CATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACG < SRR4302536.1511061/94‑1 (MQ=60)
CATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACG < SRR4302536.1244014/94‑1 (MQ=60)
CATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACG > SRR4302536.5486801/1‑94 (MQ=60)
ATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGG > SRR4302536.4741289/1‑94 (MQ=60)
ATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGG > SRR4302536.1998677/1‑94 (MQ=60)
ATGAAGTGGATGCCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGG < SRR4302536.3922752/94‑1 (MQ=60)
GAAGTGGATTTTCCGCGCGACAACGGGATGCGGTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCCAATCCACACCTATAACGGCG > SRR4302536.602976/1‑94 (MQ=60)
AGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGAT < SRR4302536.3984371/94‑1 (MQ=60)
GTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATG < SRR4302536.4390306/94‑1 (MQ=60)
TGGATTTCCATCGCGACAACGTGATGCGTTTGCATAACGGCAACCTGCCGCTGCATGAAAACGTTATGCAAATCCACACCTATAACGGCGATGA < SRR4302536.2959071/94‑1 (MQ=60)
GGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAA > SRR4302536.6312382/1‑94 (MQ=60)
GGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAA < SRR4302536.3954099/94‑1 (MQ=60)
ATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGT < SRR4302536.1972800/94‑1 (MQ=60)
TTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTC < SRR4302536.5664443/94‑1 (MQ=60)
TTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTC < SRR4302536.2882766/94‑1 (MQ=60)
TTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTC < SRR4302536.6401474/94‑1 (MQ=60)
TGTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTC < SRR4302536.4743341/94‑1 (MQ=60)
ATTCCCGCGCGACACCGAGATGCGTTTTAATAACGCCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTC < SRR4302536.3025626/94‑1 (MQ=60)
TTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCG > SRR4302536.6935231/1‑94 (MQ=60)
TCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGT > SRR4302536.5064779/1‑94 (MQ=60)
CCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTC > SRR4302536.3844656/1‑94 (MQ=60)
CCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTC > SRR4302536.1748063/1‑94 (MQ=60)
CGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTA > SRR4302536.1627466/1‑94 (MQ=60)
CGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTA < SRR4302536.3452916/94‑1 (MQ=60)
CGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTA > SRR4302536.1796908/1‑94 (MQ=60)
GCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTAC > SRR4302536.1593381/1‑94 (MQ=60)
GCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAG < SRR4302536.1722858/94‑1 (MQ=60)
CGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGC > SRR4302536.5347077/1‑94 (MQ=60)
GACAACGGGATGCTTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCA < SRR4302536.4311422/94‑1 (MQ=60)
ACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAA > SRR4302536.4944526/1‑94 (MQ=60)
ACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAAC < SRR4302536.3039020/94‑1 (MQ=60)
CGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACT < SRR4302536.1074695/94‑1 (MQ=60)
CGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACT < SRR4302536.6402552/94‑1 (MQ=60)
GGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTT < SRR4302536.2277231/94‑1 (MQ=60)
ATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATT < SRR4302536.3999194/94‑1 (MQ=60)
TGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTA < SRR4302536.757359/94‑1 (MQ=60)
TGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTA < SRR4302536.1705528/94‑1 (MQ=60)
GTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTC < SRR4302536.6230966/94‑1 (MQ=60)
TTTTCATAACGGCACCCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCC < SRR4302536.1137401/94‑1 (MQ=60)
TTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCC < SRR4302536.6148168/94‑1 (MQ=60)
TTTTCATAACGACAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCC < SRR4302536.4748203/94‑1 (MQ=60)
TTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCA < SRR4302536.2769285/94‑1 (MQ=60)
TTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCAT < SRR4302536.5081138/94‑1 (MQ=60)
TTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCAT > SRR4302536.507115/1‑94 (MQ=60)
TGCATAACGGCAACCTGCCGCTGCATGAAAACGTTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCAT < SRR4302536.4708424/94‑1 (MQ=60)
TCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATC < SRR4302536.4607899/94‑1 (MQ=60)
TCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATC < SRR4302536.77773/94‑1 (MQ=60)
CATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCG < SRR4302536.2891478/94‑1 (MQ=60)
AACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTT < SRR4302536.6136803/94‑1 (MQ=60)
AACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTT > SRR4302536.6839359/1‑94 (MQ=60)
AACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGGT > SRR4302536.6652013/1‑94 (MQ=60)
ACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTT < SRR4302536.6376220/94‑1 (MQ=60)
ACCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTT > SRR4302536.1887943/1‑94 (MQ=60)
CCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTT < SRR4302536.5773647/94‑1 (MQ=60)
CCTGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTT < SRR4302536.4296696/94‑1 (MQ=60)
TGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTAT < SRR4302536.3333467/94‑1 (MQ=60)
TGCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTAT > SRR4302536.898230/1‑94 (MQ=60)
GCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATC < SRR4302536.4691049/94‑1 (MQ=60)
GCCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATC < SRR4302536.2902967/94‑1 (MQ=60)
CCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCG < SRR4302536.1257760/94‑1 (MQ=60)
CCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCG > SRR4302536.2166878/1‑94 (MQ=60)
CCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCG < SRR4302536.3876108/94‑1 (MQ=60)
CCGCTGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCG < SRR4302536.1191547/94‑1 (MQ=60)
TGCATGAATACGGTATGCAAATCCACACCTATAAGGGCGATGAAGTCGTCTACAGCAAATCTTATTATTCCATCGGCGGCGGTTTTATCGTCGA < SRR4302536.4355062/94‑1 (MQ=60)
TGCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGA > SRR4302536.3830163/1‑94 (MQ=60)
GCATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGAT < SRR4302536.1935021/94‑1 (MQ=60)
ATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGA > SRR4302536.2396008/1‑94 (MQ=60)
ATGAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGA > SRR4302536.5475164/1‑94 (MQ=60)
GAAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTTGATGAAG > SRR4302536.1083879/1‑94 (MQ=60)
AAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGA > SRR4302536.6783997/1‑94 (MQ=60)
AAAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGGTTTATCGTCGATGAAGA > SRR4302536.75983/1‑94 (MQ=60)
AAACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAA > SRR4302536.2337974/1‑94 (MQ=60)
AACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAAC > SRR4302536.6222569/1‑94 (MQ=60)
AACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAAC > SRR4302536.2773016/1‑94 (MQ=60)
ACGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACA > SRR4302536.1637065/1‑94 (MQ=60)
CGGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACAC < SRR4302536.1612697/94‑1 (MQ=60)
GGTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACT < SRR4302536.5330155/94‑1 (MQ=60)
GTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTT < SRR4302536.1425916/94‑1 (MQ=60)
GTATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTT < SRR4302536.3820525/94‑1 (MQ=60)
TATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTT > SRR4302536.4512769/1‑94 (MQ=60)
TATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTT < SRR4302536.2190117/94‑1 (MQ=60)
TATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTT < SRR4302536.2213984/94‑1 (MQ=60)
TATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTT < SRR4302536.5840530/94‑1 (MQ=60)
TATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTT < SRR4302536.4990982/94‑1 (MQ=60)
ATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTG < SRR4302536.2168900/94‑1 (MQ=60)
ATGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTG > SRR4302536.6634463/1‑94 (MQ=60)
TGCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGG < SRR4302536.5330062/94‑1 (MQ=60)
GCAAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGT < SRR4302536.1408568/94‑1 (MQ=60)
AAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCA < SRR4302536.2332618/94‑1 (MQ=60)
AAATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCA < SRR4302536.878755/94‑1 (MQ=60)
AATCCACACCTATAGCGGTGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAG < SRR4302536.6374963/94‑1 (MQ=60)
AATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAG < SRR4302536.3479612/94‑1 (MQ=60)
ATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGG > SRR4302536.1305689/1‑94 (MQ=60)
ATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGG > SRR4302536.1839348/1‑94 (MQ=60)
ATCCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGG < SRR4302536.3405797/94‑1 (MQ=60)
CCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGAT > SRR4302536.2974268/1‑94 (MQ=60)
CCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGAT < SRR4302536.403506/94‑1 (MQ=60)
CCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGAT < SRR4302536.6738316/94‑1 (MQ=60)
CCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGAT < SRR4302536.2311005/94‑1 (MQ=60)
CCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGAT < SRR4302536.6495301/94‑1 (MQ=60)
CCACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGAT < SRR4302536.6311847/94‑1 (MQ=60)
CACACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATG > SRR4302536.5704290/1‑94 (MQ=60)
CACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCT < SRR4302536.1890049/94‑1 (MQ=60)
CACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCT < SRR4302536.4341687/94‑1 (MQ=60)
CACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCT < SRR4302536.472105/94‑1 (MQ=60)
ACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTG > SRR4302536.5273978/1‑94 (MQ=60)
ACCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTG > SRR4302536.6087000/1‑94 (MQ=60)
|
CAGGGACGGCATGAAGTGGATTTCCCGCGCGACAACGGGATGCGTTTTCATAACGGCAACCTGCCGCTGCATGAAAACGGTATGCAAATCCACGCCTATAACGGCGATGAAGTCGTCTACAGCAAAACTTATTATTCCATCGGCGGCGGTTTTATCGTCGATGAAGAACACTTTGGTCAGGATGCTG > NC_000913/1895253‑1895439
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
