Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,938,811 |
T→C |
G262G (GGA→GGG) |
yebA ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,938,811 | 0 | T | C | 100.0%
| 704.1
/ NA
| 216 | G262G (GGA→GGG) | yebA | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (114/102); total (114/102) |
Only 100 of 221 total aligned reads displayed.
TGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACG > NC_000913/1938721‑1938900
|
tggtgCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAAccc < 2:4069308/93‑1 (MQ=255)
gtgCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCtt > 1:6516168/1‑93 (MQ=255)
aaCGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGc > 2:6354726/1‑93 (MQ=255)
aCGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGcc < 2:6550742/93‑1 (MQ=255)
aCGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGcc < 2:4866597/93‑1 (MQ=255)
cgcgACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCa < 2:1005100/93‑1 (MQ=255)
gACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGAc > 1:3883674/1‑93 (MQ=255)
aCCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCGAGAACCCTTTCGCCAGAcc > 2:1999246/1‑93 (MQ=255)
aCCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGAcc > 2:3575913/1‑93 (MQ=255)
ccGGTCCCCGGATGAGTACGACGTGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCa < 1:288113/93‑1 (MQ=255)
cGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAg < 1:3361905/93‑1 (MQ=255)
ggTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGt > 1:3061307/1‑93 (MQ=255)
gTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTa < 1:1074032/93‑1 (MQ=255)
tCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTAc < 1:6114217/93‑1 (MQ=255)
tCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTAc < 1:3794951/93‑1 (MQ=255)
tCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTAc < 2:2275463/93‑1 (MQ=255)
aCCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTAcct > 1:2785780/1‑92 (MQ=255)
aCCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCg < 2:401651/93‑1 (MQ=255)
ctggATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCGGTCGGGAATCGCAAGACCCCTTTCGCCAGACCAGTACCGt < 1:5700094/91‑1 (MQ=255)
ccGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGt < 2:5177320/93‑1 (MQ=255)
ccGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGt < 2:2358626/93‑1 (MQ=255)
ccGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGt > 2:3707767/1‑93 (MQ=255)
cGGATTATTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGtt < 1:722266/93‑1 (MQ=255)
cGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGtt < 1:5639994/93‑1 (MQ=255)
ggATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTa < 2:1767997/93‑1 (MQ=255)
aTTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACg > 2:2166547/1‑93 (MQ=255)
ttAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGa > 2:3281489/1‑93 (MQ=255)
tAGTACGACGCGGTTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGACCCCTTTCGCCAGACCAGTACCGTTACGAt < 1:3451860/93‑1 (MQ=255)
tAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGAt < 2:2823878/93‑1 (MQ=255)
aGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATc < 2:863750/93‑1 (MQ=255)
tACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGt > 2:621646/1‑93 (MQ=255)
acgacgCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTa < 1:3981757/93‑1 (MQ=255)
acgacgCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTa < 2:1138636/93‑1 (MQ=255)
acgacgCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCACACCAGTACCGTTACGATcaca > 1:1557076/1‑90 (MQ=255)
gacgCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGa > 1:3247124/1‑93 (MQ=255)
gggTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTg > 1:6280318/1‑93 (MQ=255)
ggTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGc > 2:3913511/1‑93 (MQ=255)
ttAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCa < 2:777471/93‑1 (MQ=255)
tAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCAt > 1:5218715/1‑93 (MQ=255)
aaaTTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCt > 2:4202945/1‑93 (MQ=255)
aaTTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCtt > 1:1196506/1‑93 (MQ=255)
aaTTAGACGAGATACGGAACTGTTTCGCCGGCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCtt > 2:4095404/1‑93 (MQ=255)
aTTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTc > 1:1129213/1‑93 (MQ=255)
aTTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTc > 2:4623560/1‑93 (MQ=255)
ttAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCa < 2:5790897/93‑1 (MQ=255)
ttAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCa < 1:2344890/93‑1 (MQ=255)
aGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAgc > 1:5128353/1‑93 (MQ=255)
aGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAgc < 1:6611502/93‑1 (MQ=255)
gACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTCCGATCGTAGAATTTGCCATCTTCAgcg > 2:1367459/1‑93 (MQ=255)
gACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAgcg < 2:6274748/93‑1 (MQ=255)
gACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAgcg > 2:479808/1‑93 (MQ=255)
aCGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAgcgc < 1:195711/93‑1 (MQ=255)
gagaTACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCgg > 2:5892202/1‑93 (MQ=255)
agaTCCGGCACTGTTTCGCCGTCGGGAATCGCAAGATCCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGa < 2:4433576/93‑1 (MQ=255)
agaTACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCTGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGa < 2:4324558/93‑1 (MQ=255)
gaTACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGAt > 1:5021952/1‑93 (MQ=255)
gaTACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGAt > 2:5071178/1‑93 (MQ=255)
atccGGAACTTTTTCGTCGTCGGGAATCGCAAGATCCCTTTCGCCAGACCAGTGCCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATa < 1:4842757/90‑1 (MQ=255)
aTACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATa < 1:3229032/93‑1 (MQ=255)
cGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCg < 1:411160/93‑1 (MQ=255)
cGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCg > 2:4980316/1‑93 (MQ=255)
ggAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGt < 1:1914306/93‑1 (MQ=255)
gAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGta < 2:5571141/93‑1 (MQ=255)
gAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGta > 2:3803659/1‑93 (MQ=255)
gAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGta < 1:403793/93‑1 (MQ=255)
aCTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATCGCGtaat < 1:5405113/93‑1 (MQ=255)
tGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGtaataa > 1:5603085/1‑93 (MQ=255)
tGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGtaataa > 1:5818986/1‑93 (MQ=255)
tGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGtaataa < 1:4599463/93‑1 (MQ=255)
gTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTaataat > 1:3173413/1‑93 (MQ=255)
tttCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTaataatt > 2:6636755/1‑92 (MQ=255)
tttCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATc > 2:4760210/1‑93 (MQ=255)
tCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCtt > 2:5633247/1‑93 (MQ=255)
ccGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTAc > 1:1376847/1‑93 (MQ=255)
cGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTAcc < 1:4902308/93‑1 (MQ=255)
cGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTAcc < 2:1617560/93‑1 (MQ=255)
cGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTAcc < 2:1800996/93‑1 (MQ=255)
gTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCt > 1:1478721/1‑93 (MQ=255)
gTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCt < 1:1872414/93‑1 (MQ=255)
gTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCt < 2:1497081/93‑1 (MQ=255)
cGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTc < 2:2330370/93‑1 (MQ=255)
cGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTc < 1:531163/93‑1 (MQ=255)
gggAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCt > 1:5841535/1‑93 (MQ=255)
gggAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCt < 1:3498537/93‑1 (MQ=255)
ggAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTg < 1:2023363/93‑1 (MQ=255)
ggAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTg < 2:3131732/93‑1 (MQ=255)
aTCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAAc > 2:492427/1‑93 (MQ=255)
aTCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAAc > 2:1572112/1‑93 (MQ=255)
tCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACg < 2:3480366/93‑1 (MQ=255)
tCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACg > 2:3044814/1‑93 (MQ=255)
cGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGc > 1:5147832/1‑93 (MQ=255)
cAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCaa > 1:906014/1‑93 (MQ=255)
cAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCaa < 1:6225524/93‑1 (MQ=255)
cAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCaa < 2:6682994/93‑1 (MQ=255)
aaGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCaaa > 2:5488251/1‑93 (MQ=255)
aaGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCaaa > 1:5998326/1‑93 (MQ=255)
aGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAAc > 2:3333059/1‑93 (MQ=255)
aGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAAc > 2:271950/1‑93 (MQ=255)
gAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACg > 1:690987/1‑93 (MQ=255)
gAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACg < 2:5549443/93‑1 (MQ=255)
|
TGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACG > NC_000913/1938721‑1938900
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTACG > NC_000913/1938718‑1938904
|
GTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAAC < SRR4302536.4483616/94‑1 (MQ=60)
GTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCC < SRR4302536.501825/94‑1 (MQ=60)
GTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCC < SRR4302536.6174815/94‑1 (MQ=60)
TGGTGCAACGCGAGCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCT > SRR4302536.6647619/1‑94 (MQ=60)
GGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTT < SRR4302536.4764490/94‑1 (MQ=60)
GGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTT > SRR4302536.6710321/1‑94 (MQ=60)
GTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTT < SRR4302536.6001861/94‑1 (MQ=60)
aacagttccgtatctcgtCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTC > SRR4302536.6881501/19‑94 (MQ=60)
AACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCC > SRR4302536.3335145/1‑94 (MQ=60)
CGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAG < SRR4302536.157626/94‑1 (MQ=60)
CGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGAC > SRR4302536.3999195/1‑94 (MQ=60)
ACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCA < SRR4302536.5226755/94‑1 (MQ=60)
CCGGTCCCCGGATGAGTACGACGTGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAG < SRR4302536.295773/94‑1 (MQ=60)
CGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGT < SRR4302536.3461731/94‑1 (MQ=60)
CGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGT < SRR4302536.5780799/94‑1 (MQ=60)
CGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGT > SRR4302536.3151120/1‑94 (MQ=60)
CGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGT < SRR4302536.4173720/94‑1 (MQ=60)
CGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGT > SRR4302536.2160851/1‑94 (MQ=60)
GTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTAC < SRR4302536.1106184/94‑1 (MQ=60)
TCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACC < SRR4302536.6296450/94‑1 (MQ=60)
TCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACC < SRR4302536.3908144/94‑1 (MQ=60)
TCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACC < SRR4302536.3300167/94‑1 (MQ=60)
TCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAACAACCCTTTCGCCAGACCAGTACC > SRR4302536.1157280/1‑94 (MQ=60)
CACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCT > SRR4302536.2868506/1‑94 (MQ=60)
CACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCG < SRR4302536.5831244/94‑1 (MQ=60)
CTGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCGGTCGGGAATCGCAAGACCCCTTTCGCCAGACCAGTACCGTT < SRR4302536.5869573/94‑1 (MQ=60)
CGGATTATTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTA < SRR4302536.743402/94‑1 (MQ=60)
CGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTA > SRR4302536.4140516/1‑94 (MQ=60)
CGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTA < SRR4302536.5807561/94‑1 (MQ=60)
TTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAGCCCTTTCGCCAGACCAGTACCGTTACGAT < SRR4302536.5042661/94‑1 (MQ=60)
TAGTACGACGCGGTTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGACCCCTTTCGCCAGACCAGTACCGTTACGATC < SRR4302536.3554666/94‑1 (MQ=60)
TAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATC > SRR4302536.309479/1‑94 (MQ=60)
TACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCACACCAGTACCGTTACGATCaca > SRR4302536.1602806/1‑91 (MQ=60)
ACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAG < SRR4302536.4099955/94‑1 (MQ=60)
CGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGA > SRR4302536.3342332/1‑94 (MQ=60)
GACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAAACGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAA > SRR4302536.1017332/1‑94 (MQ=60)
CGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATT > SRR4302536.3292879/1‑94 (MQ=60)
CGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTG > SRR4302536.6467475/1‑94 (MQ=60)
CGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTG < SRR4302536.3342658/94‑1 (MQ=60)
GGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTCCGATCGTAGAATTTGCC > SRR4302536.6385798/1‑94 (MQ=60)
GGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCC > SRR4302536.1183998/1‑94 (MQ=60)
TTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCAT > SRR4302536.5374218/1‑94 (MQ=60)
AAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCT < SRR4302536.3658411/94‑1 (MQ=60)
AAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTT > SRR4302536.6883623/1‑94 (MQ=60)
AAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTT > SRR4302536.1232470/1‑94 (MQ=60)
AATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTC > SRR4302536.1163155/1‑94 (MQ=60)
AATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTC < SRR4302536.1836776/94‑1 (MQ=60)
ATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCA > SRR4302536.596080/1‑94 (MQ=60)
ATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCA < SRR4302536.2964747/94‑1 (MQ=60)
TTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAG < SRR4302536.2416003/94‑1 (MQ=60)
TAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGC > SRR4302536.5281550/1‑94 (MQ=60)
AGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCG > SRR4302536.3584650/1‑94 (MQ=60)
AGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCG < SRR4302536.6104581/94‑1 (MQ=60)
AGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCG < SRR4302536.6808090/94‑1 (MQ=60)
GACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGC > SRR4302536.1402854/1‑94 (MQ=60)
GACGAGATACGGAACCGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGC < SRR4302536.5459804/94‑1 (MQ=60)
ACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCG < SRR4302536.200859/94‑1 (MQ=60)
GAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGA < SRR4302536.4039115/94‑1 (MQ=60)
GAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGA > SRR4302536.6466086/1‑94 (MQ=60)
AGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGACCCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGAT < SRR4302536.606932/94‑1 (MQ=60)
AGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGAT > SRR4302536.1957991/1‑94 (MQ=60)
AGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGAT < SRR4302536.5363923/94‑1 (MQ=60)
AGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGAT > SRR4302536.5172482/1‑94 (MQ=60)
AGATACAGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGAT > SRR4302536.724304/1‑94 (MQ=60)
ATCCGGAACTTTTTCGTCGTCGGGAATCGCAAGATCCCTTTCGCCAGACCAGTGCCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAG < SRR4302536.4988501/94‑1 (MQ=60)
ATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAG < SRR4302536.3323676/94‑1 (MQ=60)
acggtacagttgcgaCGTCGGGAATCGCAAGAACCTTTCCCCCAGACCAGTCCCGTTACGATCGTAGAATTTGCCATTTTCAGCGCGGATAGTG < SRR4302536.2689882/79‑1 (MQ=57)
CGGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGT < SRR4302536.422015/94‑1 (MQ=60)
GGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTA > SRR4302536.572471/1‑94 (MQ=60)
GGAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTA < SRR4302536.1971885/94‑1 (MQ=60)
GAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAA < SRR4302536.414455/94‑1 (MQ=60)
GAACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAA > SRR4302536.1467321/1‑94 (MQ=60)
AACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAAT > SRR4302536.4684434/1‑94 (MQ=60)
ACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATCGCGTAATA < SRR4302536.5566595/94‑1 (MQ=60)
ACTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATA < SRR4302536.545412/94‑1 (MQ=60)
CTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAA > SRR4302536.9772/1‑94 (MQ=60)
CTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAA > SRR4302536.5992334/1‑94 (MQ=60)
CTGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAA > SRR4302536.5769603/1‑94 (MQ=60)
TGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGGGCAATAAT > SRR4302536.808244/1‑94 (MQ=60)
TGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAAT < SRR4302536.4737564/94‑1 (MQ=60)
TGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAAT > SRR4302536.2651179/1‑94 (MQ=60)
TGTTTCGCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAAT > SRR4302536.3266408/1‑94 (MQ=60)
GCCGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTAC > SRR4302536.1417862/1‑94 (MQ=60)
CGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCT > SRR4302536.1522422/1‑94 (MQ=60)
CGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCT > SRR4302536.5291679/1‑94 (MQ=60)
CGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCT > SRR4302536.373146/1‑94 (MQ=60)
CGTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCT < SRR4302536.5049724/94‑1 (MQ=60)
CGGCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATATTTACCT > SRR4302536.4967903/1‑94 (MQ=60)
GTCGGGAATCGCAAGAGCCGTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTT < SRR4302536.6540811/94‑1 (MQ=60)
GTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTT > SRR4302536.3477733/1‑94 (MQ=60)
GTCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTT < SRR4302536.1928780/94‑1 (MQ=60)
TCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTT > SRR4302536.392567/1‑94 (MQ=60)
TCGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTC < SRR4302536.2029918/94‑1 (MQ=60)
CGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCT > SRR4302536.6015589/1‑94 (MQ=60)
CGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCT < SRR4302536.2138170/94‑1 (MQ=60)
CGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCT > SRR4302536.6284182/1‑94 (MQ=60)
CGGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCT < SRR4302536.544749/94‑1 (MQ=60)
GGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTG < SRR4302536.415649/94‑1 (MQ=60)
GGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTG < SRR4302536.55730/94‑1 (MQ=60)
GGGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTG < SRR4302536.3602930/94‑1 (MQ=60)
GGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGA > SRR4302536.5085884/1‑94 (MQ=60)
GGAATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGA < SRR4302536.2084295/94‑1 (MQ=60)
AATCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAAC > SRR4302536.5208318/1‑94 (MQ=60)
ATCGCGAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACG < SRR4302536.6762265/94‑1 (MQ=60)
TCGCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGC > SRR4302536.5301443/1‑94 (MQ=60)
GCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAA < SRR4302536.3205899/94‑1 (MQ=60)
GCAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAA > SRR4302536.932710/1‑94 (MQ=60)
CAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAA > SRR4302536.6177137/1‑94 (MQ=60)
CAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAA < SRR4302536.6411011/94‑1 (MQ=60)
CAAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAA > SRR4302536.905305/1‑94 (MQ=60)
AAGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAAC < SRR4302536.1553950/94‑1 (MQ=60)
AGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACG > SRR4302536.1998548/1‑94 (MQ=60)
AGAACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACG > SRR4302536.711192/1‑94 (MQ=60)
ACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTAC < SRR4302536.1669642/94‑1 (MQ=60)
ACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTAC < SRR4302536.2756252/94‑1 (MQ=60)
ACCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTAC < SRR4302536.2391481/94‑1 (MQ=60)
CCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTACG > SRR4302536.4257485/1‑94 (MQ=60)
|
GTGTGGTGCAACGCGACCGGTCACCGGATTAGTACGACGCGGGTTAAAATTAGACGAGATACGGAACTGTTTCGCCGTCGGGAATCGCAAGAATCCTTTCGCCAGACCAGTACCGTTACGATCGTAGAATTTGCCATCTTCAGCGCGGATAGCGTAATAATCTTTACCTTCTGAACGCAAACGTACG > NC_000913/1938718‑1938904
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
