Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,089,888 |
T→C |
L257P (CTC→CCC) |
hisD → |
L‑histidinal:NAD+ oxidoreductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,089,888 | 0 | T | C | 100.0%
| 574.7
/ NA
| 176 | L257P (CTC→CCC) | hisD | L‑histidinal:NAD+ oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (89/87); total (89/87) |
Only 100 of 189 total aligned reads displayed.
GTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCTCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAAC > NC_000913/2089798‑2089977
|
gTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGccct > 1:6510031/1‑93 (MQ=255)
gcggcgATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGccctct > 1:724981/1‑93 (MQ=255)
gcgATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAg < 1:2530040/93‑1 (MQ=255)
gatcgatATGCCCGCAGGCCCGTCGGAAGTGCTGGTGTTTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGc < 1:3435718/93‑1 (MQ=255)
atcgatATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCt > 2:1345550/1‑93 (MQ=255)
tcgatATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTg < 2:1719588/93‑1 (MQ=255)
cgatATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGGTTTCGTGGCTTCTGATTTTCCCTCTCAGGCTGa > 2:2314600/1‑93 (MQ=255)
gatATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGaa < 2:3888426/93‑1 (MQ=255)
atatGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAac < 1:803976/93‑1 (MQ=255)
atatGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAac < 1:1596798/93‑1 (MQ=255)
tatGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCCGGCTGAaca > 1:3481364/1‑93 (MQ=255)
tatGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAaca < 2:5240435/93‑1 (MQ=255)
tatGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAaca > 2:3987611/1‑93 (MQ=255)
atGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAacac < 1:2600948/93‑1 (MQ=255)
tGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACg > 1:2736520/1‑93 (MQ=255)
tGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACg > 1:6092451/1‑93 (MQ=255)
tGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACg > 2:821466/1‑93 (MQ=255)
gCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACgg < 1:2846400/93‑1 (MQ=255)
ccGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACGCGGcc < 2:2788778/93‑1 (MQ=255)
ccGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGcc > 2:1965239/1‑93 (MQ=255)
cGCAGGCCCGTCGGAAGGGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGccc < 2:5681017/93‑1 (MQ=255)
aGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGa > 1:404770/1‑93 (MQ=255)
ggCCCGTCGCAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGAc > 1:6372670/1‑93 (MQ=255)
gCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGGTGAACACGGCCCGGACt > 1:1702040/1‑93 (MQ=255)
ccGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTca > 2:4025317/1‑93 (MQ=255)
ccGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTca < 2:6362798/93‑1 (MQ=255)
cGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTcac < 2:5501916/93‑1 (MQ=255)
cGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTcac > 2:2898302/1‑93 (MQ=255)
cGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTcac > 2:6120345/1‑93 (MQ=255)
cGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAgg < 2:3366656/93‑1 (MQ=255)
ggAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCAGGACTCACAGGt > 1:2254144/1‑93 (MQ=255)
gAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGTCCGGACTCACAGGTg > 2:241804/1‑93 (MQ=255)
aaGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGa > 2:132183/1‑93 (MQ=255)
aGTGCTGTTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGGGAt > 1:1916851/1‑93 (MQ=255)
aGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGAt < 2:1765273/93‑1 (MQ=255)
gTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGAtt > 2:1451122/1‑93 (MQ=255)
gTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGAtt > 2:3227304/1‑93 (MQ=255)
tGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGAttt < 1:1013042/93‑1 (MQ=255)
gCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGAtttt < 2:2208086/93‑1 (MQ=255)
gCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGAtttt < 2:3671461/93‑1 (MQ=255)
tGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCCGACTCACAGGTGCTTTTAc > 1:5851181/1‑93 (MQ=255)
ggTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACt > 1:4774832/1‑93 (MQ=255)
ggTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACt < 1:4537591/93‑1 (MQ=255)
gTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTg < 1:2859546/93‑1 (MQ=255)
tGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGa < 1:3368238/93‑1 (MQ=255)
tGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGa < 1:3636144/93‑1 (MQ=255)
gATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGAc > 2:6523117/1‑93 (MQ=255)
gATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGAc < 2:6513554/93‑1 (MQ=255)
ttGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGc > 2:5329058/1‑93 (MQ=255)
gCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGccc > 1:195471/1‑93 (MQ=255)
tGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCgc > 1:2230574/1‑93 (MQ=255)
tGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCgc < 2:2407966/93‑1 (MQ=255)
gACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCgct < 1:663180/93‑1 (MQ=255)
gcggcgCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGctgctg > 2:252635/1‑93 (MQ=255)
cggcgCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGa < 1:6129161/93‑1 (MQ=255)
cggcgCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGa < 2:4724876/93‑1 (MQ=255)
ggcgCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGat < 2:1399824/93‑1 (MQ=255)
gcgcTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGata > 2:1349460/1‑93 (MQ=255)
gcgcTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGata < 1:1207828/93‑1 (MQ=255)
gcTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATg < 1:3120875/93‑1 (MQ=255)
gcTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATg > 2:3708143/1‑93 (MQ=255)
gcTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATg < 1:1522130/93‑1 (MQ=255)
gcTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATg < 1:376719/93‑1 (MQ=255)
gcTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATg > 2:6712157/1‑93 (MQ=255)
cTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATgg > 1:3851314/1‑93 (MQ=255)
cTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATgg < 2:789063/93‑1 (MQ=255)
cTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATgg > 1:2361301/1‑93 (MQ=255)
tACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGgc < 2:3136679/93‑1 (MQ=255)
aCGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATggtg > 2:3575527/1‑91 (MQ=255)
cGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGgcgc > 2:3098244/1‑93 (MQ=255)
ccGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgt < 1:3202519/93‑1 (MQ=255)
cGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgtc > 2:4829354/1‑93 (MQ=255)
cGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgtc < 1:4605314/93‑1 (MQ=255)
ggATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgtcg < 1:5438882/93‑1 (MQ=255)
ggATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgtcg > 2:6413234/1‑93 (MQ=255)
aTTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgtcgcg > 1:3611142/1‑93 (MQ=255)
tttCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgtcgcgt < 2:5920559/93‑1 (MQ=255)
tttCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgtcgcgt > 1:4996231/1‑93 (MQ=255)
tttCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGcgcgtcgcgt < 1:3931958/93‑1 (MQ=255)
cGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGc < 2:5825910/93‑1 (MQ=255)
gTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGcc > 1:1456222/1‑93 (MQ=255)
gTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGcc > 1:2673507/1‑93 (MQ=255)
gggttCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGa < 1:549179/90‑1 (MQ=255)
ggCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGGGTTGCCGa < 1:1003898/93‑1 (MQ=255)
ggCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGa > 1:2730388/1‑93 (MQ=255)
ggCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGa > 2:2173593/1‑93 (MQ=255)
ttCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGc < 1:19932/93‑1 (MQ=255)
ttCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGc < 2:1899904/93‑1 (MQ=255)
ttCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGc < 1:5675535/93‑1 (MQ=255)
tCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGcc > 2:2598809/1‑93 (MQ=255)
tCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGcc > 1:1870742/1‑93 (MQ=255)
tCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGcc < 1:5296598/93‑1 (MQ=255)
tGATTTGCCCTCTCAGGCTTAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGt > 1:6549758/1‑93 (MQ=255)
gATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTc < 1:4841757/93‑1 (MQ=255)
aTTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCg < 2:3318554/93‑1 (MQ=255)
aTTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCg > 1:5996849/1‑93 (MQ=255)
tttGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGAGCGTCGCGTTGACGAGGCCGTCGa > 1:132617/1‑93 (MQ=255)
tttGCCCTCGCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGa < 2:2059875/93‑1 (MQ=255)
ttGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGaa < 2:4262173/93‑1 (MQ=255)
ttGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGaa < 1:4316122/93‑1 (MQ=255)
|
GTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCTCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAAC > NC_000913/2089798‑2089977
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCTCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAACGCCA > NC_000913/2089796‑2089981
|
CGGTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCC > SRR4302536.4238503/1‑94 (MQ=60)
GGTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCT < SRR4302536.5855173/94‑1 (MQ=60)
GGTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCT < SRR4302536.5612187/94‑1 (MQ=60)
GGTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCT > SRR4302536.6704027/1‑94 (MQ=60)
GTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTC < SRR4302536.4624566/94‑1 (MQ=60)
TGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCT > SRR4302536.746197/1‑94 (MQ=60)
TGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCT < SRR4302536.2336910/94‑1 (MQ=60)
CGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCA < SRR4302536.6428675/94‑1 (MQ=60)
GGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAG > SRR4302536.2852928/1‑94 (MQ=60)
GCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGG < SRR4302536.2606295/94‑1 (MQ=60)
CGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGC > SRR4302536.5567871/1‑94 (MQ=60)
GATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGTTTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCT < SRR4302536.3538007/94‑1 (MQ=60)
GATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCT < SRR4302536.748360/94‑1 (MQ=60)
TCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGgtta > SRR4302536.3125072/1‑90 (MQ=60)
GATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAAC > SRR4302536.6735088/1‑94 (MQ=60)
ATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCCGGCTGAACA > SRR4302536.3585162/1‑94 (MQ=60)
ATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACA < SRR4302536.1643444/94‑1 (MQ=60)
ATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACA < SRR4302536.827550/94‑1 (MQ=60)
TATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACAC > SRR4302536.4715962/1‑94 (MQ=60)
TATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACAC < SRR4302536.3336577/94‑1 (MQ=60)
ATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACG > SRR4302536.6274132/1‑94 (MQ=60)
ATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACG < SRR4302536.2679034/94‑1 (MQ=60)
ATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACG > SRR4302536.2818068/1‑94 (MQ=60)
GCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGC > SRR4302536.6221625/1‑94 (MQ=60)
GCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGC < SRR4302536.2930577/94‑1 (MQ=60)
CCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACCGCC > SRR4302536.3513102/1‑94 (MQ=60)
CAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGA > SRR4302536.415450/1‑94 (MQ=60)
CAGGCCCGTCGGAAGGGGTGGTGATTGCTGACAGCGGCGGTACGCCGGGTTTCGTGGCTGCTGATTTGACCTCTCACGCTGAACACGGCCCGGA > SRR4302536.649289/1‑94 (MQ=60)
AGGCCCGTCGCAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGAC > SRR4302536.6562586/1‑94 (MQ=60)
GGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGGTGAACACGGCCCGGACT > SRR4302536.1751299/1‑94 (MQ=60)
GGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACT > SRR4302536.3562662/1‑94 (MQ=60)
CCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCA > SRR4302536.6067526/1‑94 (MQ=60)
CGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACA < SRR4302536.5014360/94‑1 (MQ=60)
GTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAG < SRR4302536.1261211/94‑1 (MQ=60)
CGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCAGGACTCACAGGT > SRR4302536.2322389/1‑94 (MQ=60)
GGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTG > SRR4302536.2631375/1‑94 (MQ=60)
GGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTG > SRR4302536.6574963/1‑94 (MQ=60)
AAGTGCTGTTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGGGAT > SRR4302536.1974529/1‑94 (MQ=60)
AAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGAT > SRR4302536.6750016/1‑94 (MQ=60)
AGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATT < SRR4302536.160273/94‑1 (MQ=60)
AGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATT > SRR4302536.68960/1‑94 (MQ=60)
AGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGCGATT > SRR4302536.1973636/1‑94 (MQ=60)
AGTGCTGGTGATGGCTGAGAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTAAACACGGCCCGGACTCACAGGTGATT < SRR4302536.468557/94‑1 (MQ=60)
TGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGGTTTT > SRR4302536.1430707/1‑94 (MQ=60)
TGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTT < SRR4302536.1042961/94‑1 (MQ=60)
CTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCCGACTCACAGGTGCTTTTAC > SRR4302536.6025510/1‑94 (MQ=60)
TGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACT > SRR4302536.4918609/1‑94 (MQ=60)
GGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTG < SRR4302536.4673650/94‑1 (MQ=60)
GTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGA < SRR4302536.2944065/94‑1 (MQ=60)
TGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGAC < SRR4302536.3744887/94‑1 (MQ=60)
TGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGAC < SRR4302536.3468306/94‑1 (MQ=60)
GATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACG < SRR4302536.1831193/94‑1 (MQ=60)
TTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCC > SRR4302536.3794604/1‑94 (MQ=60)
TGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCC > SRR4302536.2809287/1‑94 (MQ=60)
TGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCC > SRR4302536.200614/1‑94 (MQ=60)
TGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCC > SRR4302536.434237/1‑94 (MQ=60)
CTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGC > SRR4302536.2036620/1‑94 (MQ=60)
CTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGC < SRR4302536.1046563/94‑1 (MQ=60)
CTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGC > SRR4302536.2298043/1‑94 (MQ=60)
GACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTG < SRR4302536.682629/94‑1 (MQ=60)
CAGCGGCGCTACGCCGGATTTCGTGGCTTCTGGTTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGCGATTTTAATGACGCCCGCTGCT > SRR4302536.2933040/1‑94 (MQ=60)
AGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTG > SRR4302536.5979094/1‑94 (MQ=60)
CGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGAT < SRR4302536.6311837/94‑1 (MQ=60)
GCGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATAT < SRR4302536.1244121/94‑1 (MQ=60)
CGCTACGCCGGATTTCGTTGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATG < SRR4302536.2310342/94‑1 (MQ=60)
CGCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATG < SRR4302536.1675070/94‑1 (MQ=60)
GCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGG < SRR4302536.3212046/94‑1 (MQ=60)
GCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGG < SRR4302536.1566924/94‑1 (MQ=60)
GCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGG > SRR4302536.3965962/1‑94 (MQ=60)
GCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGG < SRR4302536.386641/94‑1 (MQ=60)
GCTACGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGG > SRR4302536.2432893/1‑94 (MQ=60)
CGCCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCG > SRR4302536.5292130/1‑94 (MQ=60)
CCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTC < SRR4302536.576048/94‑1 (MQ=60)
CCGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTC < SRR4302536.3296432/94‑1 (MQ=60)
CGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCG < SRR4302536.4743628/94‑1 (MQ=60)
CGGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCG > SRR4302536.3916322/1‑94 (MQ=60)
GGATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGC < SRR4302536.5601542/94‑1 (MQ=60)
GATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCG > SRR4302536.3719119/1‑94 (MQ=60)
ATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGT > SRR4302536.5146184/1‑94 (MQ=60)
ATTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGT > SRR4302536.3657538/1‑94 (MQ=60)
TTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTT < SRR4302536.4851351/94‑1 (MQ=60)
TTTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTT < SRR4302536.4048782/94‑1 (MQ=60)
TTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTG < SRR4302536.2497610/94‑1 (MQ=60)
TTCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTG > SRR4302536.2724430/1‑94 (MQ=60)
TCGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGC < SRR4302536.5650194/94‑1 (MQ=60)
CGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCC > SRR4302536.1499341/1‑94 (MQ=60)
CGTGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCC > SRR4302536.2753433/1‑94 (MQ=60)
TGGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGA > SRR4302536.2811783/1‑94 (MQ=60)
GGGTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAG < SRR4302536.563188/94‑1 (MQ=60)
GGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGGGTTGCCGAG < SRR4302536.1033521/94‑1 (MQ=60)
GGCTTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAG > SRR4302536.4017553/1‑94 (MQ=60)
TTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCC < SRR4302536.5844266/94‑1 (MQ=60)
TTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCC > SRR4302536.1927045/1‑94 (MQ=60)
TTCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCC < SRR4302536.20494/94‑1 (MQ=60)
TCTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCG < SRR4302536.5454546/94‑1 (MQ=60)
CTGATTTGCCCTCTCAGGCTTAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGT > SRR4302536.6744792/1‑94 (MQ=60)
CTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGT > SRR4302536.1553215/1‑94 (MQ=60)
CTGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGT < SRR4302536.4140910/94‑1 (MQ=60)
TGATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTC > SRR4302536.2244856/1‑94 (MQ=60)
GATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCG < SRR4302536.4987472/94‑1 (MQ=60)
GATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCG > SRR4302536.6175613/1‑94 (MQ=60)
GATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCG < SRR4302536.3248794/94‑1 (MQ=60)
ATTTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGAGCGTCGCGTTGACGAGGCCGTCGA > SRR4302536.136107/1‑94 (MQ=60)
TTGCCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAAC < SRR4302536.4445349/94‑1 (MQ=60)
CCCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCTGTCGAACGCC < SRR4302536.4217012/94‑1 (MQ=60)
CCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAACGCCA > SRR4302536.1435989/1‑94 (MQ=60)
CCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAACGCCA > SRR4302536.899397/1‑94 (MQ=60)
|
CGGTGCGGCGATCGATATGCCCGCAGGCCCGTCGGAAGTGCTGGTGATTGCTGACAGCGGCGCTACGCCGGATTTCGTGGCTTCTGATTTGCTCTCTCAGGCTGAACACGGCCCGGACTCACAGGTGATTTTACTGACGCCCGCTGCTGATATGGCGCGTCGCGTTGCCGAGGCCGTCGAACGCCA > NC_000913/2089796‑2089981
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
