Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,110,628 |
T→C |
L152L (TTA→TTG) |
rfbB ← |
dTDP‑glucose 4,6 dehydratase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,110,628 | 0 | T | C | 100.0%
| 946.2
/ NA
| 286 | L152L (TTA→TTG) | rfbB | dTDP‑glucose 4,6 dehydratase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (134/152); total (134/152) |
Only 100 of 288 total aligned reads displayed.
TTTCCACGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGTAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTATTTTT > NC_000913/2110538‑2110717
|
cACGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAAttct < 1:4641446/93‑1 (MQ=255)
aCGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAAttctt > 1:3339786/1‑93 (MQ=255)
cgcgcgGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAAttcttc < 1:850815/93‑1 (MQ=255)
cgcgcgGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAAttcttc < 1:652943/93‑1 (MQ=255)
cgcgcgGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAAttcttc > 2:5489433/1‑93 (MQ=255)
gcgcgGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATtcttct < 1:5207891/93‑1 (MQ=255)
cgcgGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTg < 2:2274693/93‑1 (MQ=255)
cgGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGta < 2:4090/93‑1 (MQ=255)
cgGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGta < 1:2098898/93‑1 (MQ=255)
ggACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGtat < 2:283315/93‑1 (MQ=255)
ggACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGtat > 2:2071715/1‑93 (MQ=255)
gACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGtatt < 1:5390903/93‑1 (MQ=255)
gACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGtatt < 1:6464432/93‑1 (MQ=255)
aCTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGtatta < 2:4529644/93‑1 (MQ=255)
aCTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGtatta < 1:5608106/93‑1 (MQ=255)
aCTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGtatta > 1:369833/1‑93 (MQ=255)
cTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGtattat < 2:6453994/93‑1 (MQ=255)
cTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGtattat > 1:2480583/1‑93 (MQ=255)
tAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTattatt < 1:949497/93‑1 (MQ=255)
tAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTattatt < 1:767112/93‑1 (MQ=255)
tAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTattatt > 2:5731445/1‑93 (MQ=255)
aaaTGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTAttt < 1:3495499/93‑1 (MQ=255)
tGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACt > 1:3201136/1‑93 (MQ=255)
cTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCt < 2:178531/93‑1 (MQ=255)
tGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTg < 1:6355439/93‑1 (MQ=255)
ggATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTgg > 2:1312670/1‑93 (MQ=255)
ggATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTgg < 2:291597/93‑1 (MQ=255)
gATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGa > 2:4676201/1‑93 (MQ=255)
aTGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGAt < 1:1029066/93‑1 (MQ=255)
gCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGa < 1:6027069/93‑1 (MQ=255)
cTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAATCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCCTCTGGATGAg < 1:3615333/93‑1 (MQ=255)
cTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAg < 2:4332302/93‑1 (MQ=255)
cTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAg > 1:3791460/1‑93 (MQ=255)
cTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAg > 2:3751805/1‑93 (MQ=255)
tttGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAgg > 2:6356629/1‑93 (MQ=255)
tGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCa < 2:5403815/93‑1 (MQ=255)
tGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCa < 1:1823346/93‑1 (MQ=255)
gATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCaaa < 1:6185375/93‑1 (MQ=255)
aTGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAAt < 2:5075075/93‑1 (MQ=255)
tGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATc > 2:4482405/1‑93 (MQ=255)
gCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCa < 1:2161797/93‑1 (MQ=255)
cGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCAc < 2:6574238/93‑1 (MQ=255)
cGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCAc < 1:456363/93‑1 (MQ=255)
ggAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCAcc < 1:4024481/93‑1 (MQ=255)
gAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCa < 2:277094/93‑1 (MQ=255)
gAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCa > 2:4224135/1‑93 (MQ=255)
gAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCa > 1:2559820/1‑93 (MQ=255)
aaTAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCAt < 2:2200614/93‑1 (MQ=255)
aaTAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCAt > 2:6708257/1‑93 (MQ=255)
aaTAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCAt < 1:4130033/93‑1 (MQ=255)
aTAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATa < 1:478697/93‑1 (MQ=255)
tAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAg > 2:3220991/1‑93 (MQ=255)
tAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAg > 2:210611/1‑93 (MQ=255)
aaGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGa < 2:5935166/93‑1 (MQ=255)
aGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGAc < 1:3416623/93‑1 (MQ=255)
gggCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACt > 2:5780503/1‑93 (MQ=255)
gggCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACt > 2:1972650/1‑93 (MQ=255)
gctgctTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTc < 1:5890162/93‑1 (MQ=255)
ctgctTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCg > 1:1370268/1‑93 (MQ=255)
tgctTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCAGCATAGACTTCGt > 2:4893441/1‑93 (MQ=255)
gctTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTc > 2:3923556/1‑93 (MQ=255)
ctTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCa < 2:1633122/93‑1 (MQ=255)
ctTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCa < 2:1507720/93‑1 (MQ=255)
ctTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCa > 2:640984/1‑93 (MQ=255)
cgcgTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGa > 2:6265484/1‑93 (MQ=255)
gcgTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGaa < 1:1764753/93‑1 (MQ=255)
cgTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGaaa < 1:4912720/93‑1 (MQ=255)
gTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAat > 2:3326437/1‑93 (MQ=255)
aaGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAatat < 1:5712363/93‑1 (MQ=255)
aaGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAatat < 2:1534964/93‑1 (MQ=255)
aGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATatg > 2:3474763/1‑93 (MQ=255)
gCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATatga < 1:3965152/93‑1 (MQ=255)
cTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATatgat < 1:5835280/93‑1 (MQ=255)
tctcgtcTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATatgatg < 1:300784/91‑1 (MQ=255)
tGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATatgatg < 1:1243530/93‑1 (MQ=255)
tGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATatgatg > 2:5192769/1‑93 (MQ=255)
tGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATatgatg > 2:2644809/1‑93 (MQ=255)
tGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATatgatg < 1:2830383/93‑1 (MQ=255)
gtcgtcTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATAtgatga > 2:1275957/1‑93 (MQ=255)
tcgtcTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGaa < 1:5335753/93‑1 (MQ=255)
tctcAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAAc > 2:3284189/1‑93 (MQ=255)
tcAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACgg > 1:4402110/1‑93 (MQ=255)
tcAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACgg > 2:3729374/1‑93 (MQ=255)
cAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGa < 1:1518931/93‑1 (MQ=255)
aGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGaa > 2:4961809/1‑93 (MQ=255)
gTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAg < 1:5066932/93‑1 (MQ=255)
tAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGc < 1:1101584/93‑1 (MQ=255)
tAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGc < 1:2895672/93‑1 (MQ=255)
aaaTAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCt > 2:10802/1‑93 (MQ=255)
aaTAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTa < 1:5449727/93‑1 (MQ=255)
aaTAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTa > 1:2718883/1‑93 (MQ=255)
aTAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTAt < 1:4263711/93‑1 (MQ=255)
tAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTAtt < 1:5063537/93‑1 (MQ=255)
tAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTAtt < 1:2350849/93‑1 (MQ=255)
aaGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTAttt > 2:1990277/1‑93 (MQ=255)
aGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTAtttt > 2:877717/1‑93 (MQ=255)
aGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTAtttt > 2:6478161/1‑93 (MQ=255)
aGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTAtttt > 2:6032418/1‑93 (MQ=255)
aGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTAtttt < 1:1050158/93‑1 (MQ=255)
gggCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTAttttt > 2:715504/1‑93 (MQ=255)
|
TTTCCACGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGTAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTATTTTT > NC_000913/2110538‑2110717
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACGTTTCCACGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGTAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTATTTTTCTTG > NC_000913/2110535‑2110721
|
ACGTTTCCACGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGC < SRR4302536.5587305/94‑1 (MQ=60)
ACGTTTCCACGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGC < SRR4302536.2378850/94‑1 (MQ=60)
CGTTTCCACGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCA < SRR4302536.5355944/94‑1 (MQ=60)
CGTTTCCACGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCA < SRR4302536.2207871/94‑1 (MQ=60)
TTCCACGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATT > SRR4302536.3483784/1‑94 (MQ=60)
TTCCACGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATT > SRR4302536.5571312/1‑94 (MQ=60)
CCTCGCGCGGATTAAATGATCGCTGGATGCTTTGGCTGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCT < SRR4302536.5570713/94‑1 (MQ=60)
CACGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTT < SRR4302536.5239084/94‑1 (MQ=60)
CACGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTT < SRR4302536.4780959/94‑1 (MQ=60)
CACGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTT > SRR4302536.3438728/1‑94 (MQ=60)
CGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCT < SRR4302536.672095/94‑1 (MQ=60)
CGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCT < SRR4302536.2965517/94‑1 (MQ=60)
CGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCT < SRR4302536.875840/94‑1 (MQ=60)
GCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGTAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTG < SRR4302536.1291391/94‑1 (MQ=60)
GCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTG < SRR4302536.5363123/94‑1 (MQ=60)
GCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTG < SRR4302536.80309/94‑1 (MQ=60)
GCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTA < SRR4302536.5624071/94‑1 (MQ=60)
CGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTAT < SRR4302536.1475777/94‑1 (MQ=60)
CGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTAT < SRR4302536.413285/94‑1 (MQ=60)
CGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTAT < SRR4302536.2162029/94‑1 (MQ=60)
CGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGAAATTCTTCTGTAT > SRR4302536.2424734/1‑94 (MQ=60)
CGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGCCGTCTCAGTAAATAAGGGCAATTCTTCTGTAT < SRR4302536.6688647/94‑1 (MQ=60)
GGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATT > SRR4302536.3221289/1‑94 (MQ=60)
GGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATT > SRR4302536.801572/1‑94 (MQ=60)
GACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTA > SRR4302536.3839035/1‑94 (MQ=60)
GACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTA > SRR4302536.379600/1‑94 (MQ=60)
GACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTA < SRR4302536.6657397/94‑1 (MQ=60)
GACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTA < SRR4302536.5551846/94‑1 (MQ=60)
ACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTAT < SRR4302536.5774729/94‑1 (MQ=60)
ACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTAT < SRR4302536.4700979/94‑1 (MQ=60)
ACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTAT > SRR4302536.2555438/1‑94 (MQ=60)
CTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATT < SRR4302536.2993915/94‑1 (MQ=60)
CTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATT < SRR4302536.1194083/94‑1 (MQ=60)
CTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATT < SRR4302536.5299769/94‑1 (MQ=60)
TAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTT < SRR4302536.977561/94‑1 (MQ=60)
TAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTT < SRR4302536.789593/94‑1 (MQ=60)
TAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTT < SRR4302536.5785621/94‑1 (MQ=60)
AAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTA > SRR4302536.4826978/1‑94 (MQ=60)
AAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTA > SRR4302536.384987/1‑94 (MQ=60)
AAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTA < SRR4302536.3599796/94‑1 (MQ=60)
ATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACT > SRR4302536.3295001/1‑94 (MQ=60)
TGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTT < SRR4302536.6897070/94‑1 (MQ=60)
GATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTC > SRR4302536.6267843/1‑94 (MQ=60)
ATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCA < SRR4302536.6889075/94‑1 (MQ=60)
GCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCT > SRR4302536.6616263/1‑94 (MQ=60)
CTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTG > SRR4302536.4364443/1‑94 (MQ=60)
TGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGG < SRR4302536.6544774/94‑1 (MQ=60)
TGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGG < SRR4302536.1269711/94‑1 (MQ=60)
TGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGG < SRR4302536.1850142/94‑1 (MQ=60)
TGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGG < SRR4302536.2582304/94‑1 (MQ=60)
GGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGA < SRR4302536.6011839/94‑1 (MQ=60)
GATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGAT < SRR4302536.1078920/94‑1 (MQ=60)
ATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATG < SRR4302536.1059549/94‑1 (MQ=60)
TGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGA < SRR4302536.5466247/94‑1 (MQ=60)
GCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAG > SRR4302536.3904571/1‑94 (MQ=60)
GCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAG < SRR4302536.6206769/94‑1 (MQ=60)
CTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAATCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCCTCTGGATGAGG < SRR4302536.3723421/94‑1 (MQ=60)
CTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGG > SRR4302536.1673379/1‑94 (MQ=60)
CTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGG < SRR4302536.6406334/94‑1 (MQ=60)
TTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGC < SRR4302536.2225615/94‑1 (MQ=60)
TTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCCCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGC > SRR4302536.2345605/1‑94 (MQ=60)
TGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAA < SRR4302536.1878351/94‑1 (MQ=60)
TGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAA > SRR4302536.6708537/1‑94 (MQ=60)
GGATGCGGAATAAGGGCTGCTTGGGGCGTAAGCTGTCGTCTCAGTAAGTAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAA > SRR4302536.5532381/1‑94 (MQ=60)
GATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAAT < SRR4302536.6369592/94‑1 (MQ=60)
GATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAAT < SRR4302536.2567227/94‑1 (MQ=60)
GCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCAC < SRR4302536.2226823/94‑1 (MQ=60)
GCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCAC < SRR4302536.5544426/94‑1 (MQ=60)
GCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCAC > SRR4302536.929475/1‑94 (MQ=60)
CGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACC < SRR4302536.468328/94‑1 (MQ=60)
GGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCA > SRR4302536.2636860/1‑94 (MQ=60)
GGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCA < SRR4302536.4143875/94‑1 (MQ=60)
AATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATA < SRR4302536.4252476/94‑1 (MQ=60)
ATAAGGGCTGGTTGGCGCGTAAGCTGGCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAT > SRR4302536.4405843/1‑94 (MQ=60)
ATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAG < SRR4302536.491157/94‑1 (MQ=60)
TAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGA > SRR4302536.4956343/1‑94 (MQ=60)
AAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGAC > SRR4302536.3360283/1‑94 (MQ=60)
AGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACT < SRR4302536.3518308/94‑1 (MQ=60)
AGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACT > SRR4302536.644947/1‑94 (MQ=60)
GGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTC > SRR4302536.890992/1‑94 (MQ=60)
GCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCG < SRR4302536.6065568/94‑1 (MQ=60)
GCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCG > SRR4302536.1411106/1‑94 (MQ=60)
TGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTC > SRR4302536.288421/1‑94 (MQ=60)
TGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTC < SRR4302536.1707315/94‑1 (MQ=60)
GCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCA < SRR4302536.2250104/94‑1 (MQ=60)
CTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAG < SRR4302536.3787759/94‑1 (MQ=60)
CTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAG > SRR4302536.6318905/1‑94 (MQ=60)
CGCGTAATCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAA < SRR4302536.2913590/94‑1 (MQ=60)
TCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAA > SRR4302536.1349853/1‑94 (MQ=60)
GCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAA < SRR4302536.3762408/94‑1 (MQ=60)
GCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAA > SRR4302536.2691447/1‑94 (MQ=60)
GCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAA < SRR4302536.1818067/94‑1 (MQ=60)
GCGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAA > SRR4302536.2472796/1‑94 (MQ=60)
CGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAAT > SRR4302536.3716622/1‑94 (MQ=60)
CGTAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAAT < SRR4302536.5060381/94‑1 (MQ=60)
TAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATAT < SRR4302536.4086211/94‑1 (MQ=60)
TAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATAT < SRR4302536.6142941/94‑1 (MQ=60)
TAAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATAT < SRR4302536.5903112/94‑1 (MQ=60)
TAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATG > SRR4302536.5886212/1‑94 (MQ=60)
AAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATG > SRR4302536.502674/1‑94 (MQ=60)
AAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATG < SRR4302536.5882244/94‑1 (MQ=60)
AAGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACGTCATCGGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATG < SRR4302536.2915398/94‑1 (MQ=60)
AGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGA > SRR4302536.4636822/1‑94 (MQ=60)
AGCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGA > SRR4302536.5844582/1‑94 (MQ=60)
GCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGAT < SRR4302536.5630648/94‑1 (MQ=60)
GCTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGAT < SRR4302536.4082870/94‑1 (MQ=60)
CTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATG < SRR4302536.6009143/94‑1 (MQ=60)
CTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATG < SRR4302536.109604/94‑1 (MQ=60)
CTGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATG < SRR4302536.2692056/94‑1 (MQ=60)
ATGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATG > SRR4302536.3956539/1‑94 (MQ=60)
TGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCGAATCACCATAGACTTCGTCAGTAGAAATATGATGA > SRR4302536.5217545/1‑94 (MQ=60)
TGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGA < SRR4302536.2914177/94‑1 (MQ=60)
TGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGA < SRR4302536.1280873/94‑1 (MQ=60)
TGTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGA > SRR4302536.3521910/1‑94 (MQ=60)
TCTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGA < SRR4302536.308772/94‑1 (MQ=60)
GTCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAA > SRR4302536.2112051/1‑94 (MQ=60)
TCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAA < SRR4302536.5495187/94‑1 (MQ=60)
TCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAA > SRR4302536.3544470/1‑94 (MQ=60)
TCGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAA > SRR4302536.3083979/1‑94 (MQ=60)
CGTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAA > SRR4302536.4732455/1‑94 (MQ=60)
GTCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAAC < SRR4302536.2552093/94‑1 (MQ=60)
TCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACG < SRR4302536.3633587/94‑1 (MQ=60)
TCTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACG > SRR4302536.3470221/1‑94 (MQ=60)
CTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGG > SRR4302536.3332358/1‑94 (MQ=60)
CTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGG > SRR4302536.4533716/1‑94 (MQ=60)
CTCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGG < SRR4302536.5087753/94‑1 (MQ=60)
TCAGTAAATAAGGGCAATTCTTCTGTATTTTTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGA > SRR4302536.1111339/1‑94 (MQ=60)
TCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGA < SRR4302536.4076831/94‑1 (MQ=60)
TCAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGA > SRR4302536.4361989/1‑94 (MQ=60)
CAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAA < SRR4302536.4110351/94‑1 (MQ=60)
CAGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAA < SRR4302536.1563639/94‑1 (MQ=60)
AGTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAG > SRR4302536.4639433/1‑94 (MQ=60)
GTAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGC < SRR4302536.5218667/94‑1 (MQ=60)
TAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCT < SRR4302536.1134648/94‑1 (MQ=60)
TAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCT > SRR4302536.4410078/1‑94 (MQ=60)
TAAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCT < SRR4302536.2981068/94‑1 (MQ=60)
AAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTA > SRR4302536.2799996/1‑94 (MQ=60)
AAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTA > SRR4302536.6544843/1‑94 (MQ=60)
AAATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTA < SRR4302536.1523109/94‑1 (MQ=60)
AATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTAT < SRR4302536.6179712/94‑1 (MQ=60)
AATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTAT > SRR4302536.1874816/1‑94 (MQ=60)
AATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTAT < SRR4302536.5612746/94‑1 (MQ=60)
AATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTAT > SRR4302536.5139927/1‑94 (MQ=60)
ATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTATT > SRR4302536.4905242/1‑94 (MQ=60)
ATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTATT > SRR4302536.5472137/1‑94 (MQ=60)
ATAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTATT < SRR4302536.4390782/94‑1 (MQ=60)
TAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTATTT < SRR4302536.5215194/94‑1 (MQ=60)
TAAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTATTT < SRR4302536.2422114/94‑1 (MQ=60)
AAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTATTTT < SRR4302536.1925312/94‑1 (MQ=60)
AAGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTATTTT > SRR4302536.5605094/1‑94 (MQ=60)
AGGGCAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTATTTTT < SRR4302536.1081486/94‑1 (MQ=60)
CAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTATTTTTCTTG > SRR4302536.5482380/1‑94 (MQ=60)
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ACGTTTCCACGCGCGGACTAAATGATCGCTGGATGCTTTGGATGCGGAATAAGGGCTGCTTGGCGCGTAAGCTGTCGTCTCAGTAAATAAGGGTAATTCTTCTGTATTATTTACTTCATCTGGATGAGGCAAATCACCATAGACTTCGTCAGTAGAAATATGATGAAAACGGAAGCTATTTTTCTTG > NC_000913/2110535‑2110721
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
