Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,172,208 |
T→C |
M31V (ATG→GTG) |
gatC ← |
PTS system galactitol‑specific enzyme IIC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,172,208 | 0 | T | C | 100.0%
| 823.9
/ NA
| 249 | M31V (ATG→GTG) | gatC | PTS system galactitol‑specific enzyme IIC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (120/129); total (120/129) |
Only 100 of 251 total aligned reads displayed.
TGGAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCATGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACA > NC_000913/2172118‑2172297
|
tGGAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGc > 2:3813555/1‑93 (MQ=255)
tGGAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGc > 1:3019692/1‑93 (MQ=255)
aggAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGc < 2:4157392/92‑1 (MQ=255)
ggAATCCAGCATTAAGCCAATCACAAGTCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGcc < 2:506/93‑1 (MQ=255)
gAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCt < 2:3084563/93‑1 (MQ=255)
gAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCt < 2:3223131/93‑1 (MQ=255)
gAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCt > 2:2525188/1‑93 (MQ=255)
aTCCAGCATTAAGCCAATCACAAGCCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAAGCGCCTGCCTTCACGCCTaa < 1:4145293/93‑1 (MQ=255)
tCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAat > 2:2743290/1‑93 (MQ=255)
tCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAat > 2:5416702/1‑93 (MQ=255)
ccAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAata < 1:2221293/93‑1 (MQ=255)
cAGCATTAAGCCAATCACAAGGCCAATGCCATCAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCACTCGCCTGCCTTCACGCCTAatat < 2:6719837/93‑1 (MQ=255)
cAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAatat < 1:4470270/93‑1 (MQ=255)
cAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAatat < 2:5226164/93‑1 (MQ=255)
aGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATAtt < 2:4456252/93‑1 (MQ=255)
aGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATAtt < 1:5026157/93‑1 (MQ=255)
gCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATAttt > 1:3406137/1‑93 (MQ=255)
aTTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTa < 2:863463/93‑1 (MQ=255)
ttAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAg > 1:716748/1‑93 (MQ=255)
ccAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGaaaaa > 1:4717672/1‑93 (MQ=255)
cAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGaaaaaa > 1:3562868/1‑93 (MQ=255)
cAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGaaaaaa > 1:1898582/1‑93 (MQ=255)
aaTCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAaat < 1:2351493/93‑1 (MQ=255)
aTCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAaata < 1:6330231/93‑1 (MQ=255)
aTCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAaata < 2:1125330/93‑1 (MQ=255)
cacaAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAaataat < 1:5989535/93‑1 (MQ=255)
cacaAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAaataat < 2:4056504/93‑1 (MQ=255)
acaAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAatg < 1:5861371/93‑1 (MQ=255)
caAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAatga > 2:2207788/1‑93 (MQ=255)
caAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAatga > 2:3368391/1‑93 (MQ=255)
caAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAatga < 1:1991705/93‑1 (MQ=255)
aGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAatgatg > 1:308875/1‑93 (MQ=255)
aGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAatgatg < 2:2015514/93‑1 (MQ=255)
aGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAatgatg > 1:4892813/1‑93 (MQ=255)
aGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAatgatg < 1:4936522/93‑1 (MQ=255)
ggCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAAtgatga < 1:4240486/93‑1 (MQ=255)
ggCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAAtgatga < 2:4322237/93‑1 (MQ=255)
gCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGAc < 1:3453182/93‑1 (MQ=255)
ccAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACa > 2:5738561/1‑93 (MQ=255)
cAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACaa < 1:695973/93‑1 (MQ=255)
cAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACaa < 2:1013777/93‑1 (MQ=255)
cAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACaa < 2:5311102/93‑1 (MQ=255)
cAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACaa < 1:6101405/93‑1 (MQ=255)
aTGCCAACAAAGCCGATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATc > 1:1012082/1‑93 (MQ=255)
aTGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATc < 1:6106904/93‑1 (MQ=255)
aTGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATc > 1:1329074/1‑93 (MQ=255)
tGCCAACAAAGCCAATCCCGATATGCAGACGCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCg > 1:6340251/1‑93 (MQ=255)
tGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCg > 2:1772603/1‑93 (MQ=255)
gCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCgg < 1:5071511/93‑1 (MQ=255)
gCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCgg < 1:3644500/93‑1 (MQ=255)
aacaaAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGgcag > 1:4750273/1‑93 (MQ=255)
acaaAGCCAATCCCGATATGCAGACCCGCTTTGAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGgcagc > 2:5583259/1‑93 (MQ=255)
acaaAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGgcagc > 2:268989/1‑93 (MQ=255)
acaaAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGgcagc > 2:6317652/1‑93 (MQ=255)
acaaAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGgcagc > 2:853713/1‑93 (MQ=255)
acaaAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGgcagc > 2:1952091/1‑93 (MQ=255)
caaAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGgcagca < 1:1175512/93‑1 (MQ=255)
aaGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATc > 2:3156712/1‑93 (MQ=255)
gCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCAc > 2:4587165/1‑93 (MQ=255)
gCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCAc < 2:6581818/93‑1 (MQ=255)
ccAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCAcc > 2:3620484/1‑93 (MQ=255)
cAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCg > 2:6196450/1‑93 (MQ=255)
tCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAg > 2:2884189/1‑93 (MQ=255)
cccGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAgg < 2:4236617/93‑1 (MQ=255)
cccGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAgg < 1:1553603/93‑1 (MQ=255)
ccGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAggg > 2:1860365/1‑93 (MQ=255)
gATATGCAGACCCGTTTTAAAGAAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATATTATTGACATTCGCCGGCATCACCGAAGGGcg > 1:2697954/1‑92 (MQ=255)
gATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGcc > 1:2858802/1‑93 (MQ=255)
gATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGcc < 1:3793460/93‑1 (MQ=255)
atatGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCg < 2:921251/93‑1 (MQ=255)
tatGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGa > 1:5679826/1‑93 (MQ=255)
atGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAg < 2:3464153/93‑1 (MQ=255)
tGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAgg < 1:87736/93‑1 (MQ=255)
gCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAggc > 1:1912778/1‑92 (MQ=255)
gACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCCGCAGCATCACCGTAGGGCCGAGGTCga > 1:2089179/1‑93 (MQ=255)
aCCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCgag > 2:1639236/1‑93 (MQ=255)
cccGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCgaga < 2:5568509/93‑1 (MQ=255)
cccGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCgaga > 1:5548912/1‑93 (MQ=255)
cGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAat < 1:2630990/93‑1 (MQ=255)
cGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAat < 2:2054932/93‑1 (MQ=255)
gCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAata > 2:3915919/1‑93 (MQ=255)
cTTTAAAGCGATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAatat < 1:1354892/93‑1 (MQ=255)
cTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAatat < 2:2446808/93‑1 (MQ=255)
cTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAatat < 1:786450/93‑1 (MQ=255)
tttAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAAtata < 2:1347589/93‑1 (MQ=255)
ttAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATaa < 1:4685525/93‑1 (MQ=255)
agaaaTCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCa > 1:4814299/4‑93 (MQ=255)
gCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCAt > 2:5460390/1‑93 (MQ=255)
gCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCAt < 2:4373391/93‑1 (MQ=255)
acAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCAt < 1:4570396/92‑1 (MQ=255)
cAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATg > 1:5776510/1‑93 (MQ=255)
cAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATg < 2:3931174/93‑1 (MQ=255)
aTCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGAc < 2:6429268/93‑1 (MQ=255)
aTCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGAc < 1:3082920/93‑1 (MQ=255)
tCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACt > 2:6415847/1‑93 (MQ=255)
gcctgcctTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTc > 1:1610580/1‑93 (MQ=255)
cctgcctTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCt < 2:1450283/93‑1 (MQ=255)
tgcctTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGa > 1:3925760/1‑93 (MQ=255)
tCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACa < 1:4661857/93‑1 (MQ=255)
tCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACa > 2:772787/1‑93 (MQ=255)
|
TGGAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCATGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACA > NC_000913/2172118‑2172297
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAATGGAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCATGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGG > NC_000913/2172115‑2172301
|
CAATGGAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAGGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCAC > SRR4302536.146150/1‑94 (MQ=60)
CAATGGAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCAC > SRR4302536.5784422/1‑94 (MQ=60)
CAATGGAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCAC > SRR4302536.1185476/1‑94 (MQ=60)
CAATGGAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCAC > SRR4302536.3306049/1‑94 (MQ=60)
CAATGGAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCAC < SRR4302536.5027838/94‑1 (MQ=60)
CAATGGAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCAC > SRR4302536.1790163/1‑94 (MQ=60)
ATGGAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGC > SRR4302536.3108430/1‑94 (MQ=60)
GAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTA < SRR4302536.6277854/94‑1 (MQ=60)
AATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAA > SRR4302536.4728650/1‑94 (MQ=60)
ATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAAT < SRR4302536.3633564/94‑1 (MQ=60)
ATCCAGCATTAAGCCAATCACAAGCCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAAGCGCCTGCCTTCACGCCTAAT < SRR4302536.4268264/94‑1 (MQ=60)
CCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATAT < SRR4302536.6794018/94‑1 (MQ=60)
CCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATAT > SRR4302536.6485759/1‑94 (MQ=60)
CCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATAT < SRR4302536.2288472/94‑1 (MQ=60)
CCAGCATTAAGCCAATCACAAGGCCAATGCAAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATAT < SRR4302536.6075257/94‑1 (MQ=60)
CAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATT > SRR4302536.5996108/1‑94 (MQ=60)
CAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATT < SRR4302536.4604558/94‑1 (MQ=60)
AGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTT > SRR4302536.3507449/1‑94 (MQ=60)
AGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTT < SRR4302536.5176836/94‑1 (MQ=60)
ATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAG > SRR4302536.737715/1‑94 (MQ=60)
ATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAG < SRR4302536.3145985/94‑1 (MQ=60)
TAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAA > SRR4302536.963603/1‑94 (MQ=60)
TAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAA > SRR4302536.4653920/1‑94 (MQ=60)
AAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAA > SRR4302536.719389/1‑94 (MQ=60)
AGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAA < SRR4302536.1968692/94‑1 (MQ=60)
GCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAA > SRR4302536.4859595/1‑94 (MQ=60)
CCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAA > SRR4302536.1955760/1‑94 (MQ=60)
CCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAA > SRR4302536.3669399/1‑94 (MQ=60)
CAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAAT < SRR4302536.690502/94‑1 (MQ=60)
CAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAAT > SRR4302536.6527248/1‑94 (MQ=60)
AATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATA > SRR4302536.384673/1‑94 (MQ=60)
AATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATA < SRR4302536.2422774/94‑1 (MQ=60)
AATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATA > SRR4302536.4401654/1‑94 (MQ=60)
ATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAA < SRR4302536.6518761/94‑1 (MQ=60)
TCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAAT > SRR4302536.4838800/1‑94 (MQ=60)
CACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATG > SRR4302536.4236384/1‑94 (MQ=60)
CACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATG < SRR4302536.6168102/94‑1 (MQ=60)
ACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGA < SRR4302536.6035991/94‑1 (MQ=60)
ACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGA > SRR4302536.5831889/1‑94 (MQ=60)
CAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGAT > SRR4302536.5066559/1‑94 (MQ=60)
CAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGAT < SRR4302536.4836281/94‑1 (MQ=60)
CAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGAT < SRR4302536.2051588/94‑1 (MQ=60)
AAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATG > SRR4302536.5039981/1‑94 (MQ=60)
AAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATG > SRR4302536.317075/1‑94 (MQ=60)
AAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATG > SRR4302536.3221381/1‑94 (MQ=60)
AAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATG < SRR4302536.746811/94‑1 (MQ=60)
AGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGA < SRR4302536.1427080/94‑1 (MQ=60)
AGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGA < SRR4302536.5084853/94‑1 (MQ=60)
GGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGAC < SRR4302536.4366735/94‑1 (MQ=60)
GCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACA < SRR4302536.3556035/94‑1 (MQ=60)
GCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACA < SRR4302536.809052/94‑1 (MQ=60)
CAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAAT < SRR4302536.1106741/94‑1 (MQ=60)
CAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAAT > SRR4302536.2934782/1‑94 (MQ=60)
CAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAAT < SRR4302536.716301/94‑1 (MQ=60)
CAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAAT < SRR4302536.6283314/94‑1 (MQ=60)
AATGCCAACAAAGCCGATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATC > SRR4302536.1041961/1‑94 (MQ=60)
AATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATC < SRR4302536.4286085/94‑1 (MQ=60)
AATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATC > SRR4302536.1368749/1‑94 (MQ=60)
ATGCCAACAAAGCCAATCCCGATATGCAGACGCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCG > SRR4302536.6529112/1‑94 (MQ=60)
ATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCG < SRR4302536.4886781/94‑1 (MQ=60)
ATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCG < SRR4302536.3592382/94‑1 (MQ=60)
ATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCG < SRR4302536.6288974/94‑1 (MQ=60)
GCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGC < SRR4302536.6287509/94‑1 (MQ=60)
GCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGC < SRR4302536.5223348/94‑1 (MQ=60)
GCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGC > SRR4302536.2051499/1‑94 (MQ=60)
GCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGC < SRR4302536.3753464/94‑1 (MQ=60)
CCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCA > SRR4302536.5119100/1‑94 (MQ=60)
CCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCA < SRR4302536.4767484/94‑1 (MQ=60)
CAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAG > SRR4302536.4893227/1‑94 (MQ=60)
CAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAG > SRR4302536.926130/1‑94 (MQ=60)
CAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAG > SRR4302536.4826401/1‑94 (MQ=60)
ACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCA > SRR4302536.5957957/1‑94 (MQ=60)
CAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCAT < SRR4302536.1300770/94‑1 (MQ=60)
CAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCAT < SRR4302536.1210897/94‑1 (MQ=60)
AAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCA > SRR4302536.5840956/1‑94 (MQ=60)
AAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCA < SRR4302536.2160371/94‑1 (MQ=60)
AATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTA > SRR4302536.83854/1‑94 (MQ=60)
AATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTA > SRR4302536.1848686/1‑94 (MQ=60)
ATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAG > SRR4302536.2030573/1‑94 (MQ=60)
ATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAG > SRR4302536.2900915/1‑94 (MQ=60)
ATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAG < SRR4302536.5003153/94‑1 (MQ=60)
TCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGG > SRR4302536.5212001/1‑94 (MQ=60)
CCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGG < SRR4302536.1599253/94‑1 (MQ=60)
CGATATGCAGACCCGTTTTAAAGAAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAttattgacattcgccggcatcaccgaagggcg > SRR4302536.2778465/1‑62 (MQ=60)
CGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCC < SRR4302536.2594019/94‑1 (MQ=60)
CGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCC > SRR4302536.2943305/1‑94 (MQ=60)
GATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCG < SRR4302536.3906625/94‑1 (MQ=60)
GATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCG < SRR4302536.2134217/94‑1 (MQ=60)
ATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGA > SRR4302536.5848695/1‑94 (MQ=60)
ATGCAGACCCGCTGTAAAGCAATCGGCTCCCTTCACGCCTAATATTTTAGAAAAAATAATTATGACAATCGGCAGCATCACCGTAGGGCCGAGG > SRR4302536.4236178/1‑94 (MQ=60)
TGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGT < SRR4302536.90087/94‑1 (MQ=60)
TGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGT > SRR4302536.2588628/1‑94 (MQ=60)
TGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGC > SRR4302536.1970324/1‑94 (MQ=60)
GCAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTC < SRR4302536.3548932/94‑1 (MQ=60)
CAGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCG < SRR4302536.3779631/94‑1 (MQ=60)
CAGACCCGCTTTAAAGCAAGCGCCTGCCTTCACGCCTAATATTGTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCG < SRR4302536.5180390/94‑1 (MQ=60)
AGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGA > SRR4302536.3177318/1‑94 (MQ=60)
AGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGA > SRR4302536.2954939/1‑94 (MQ=60)
AGACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCCGCAGCATCACCGTAGGGCCGAGGTCGA > SRR4302536.2152056/1‑94 (MQ=60)
ACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGA > SRR4302536.336604/1‑94 (MQ=60)
ACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGA > SRR4302536.5714225/1‑94 (MQ=60)
ACCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAACATCACCGTAaggacgagggcgaca > SRR4302536.5940360/1‑79 (MQ=60)
CCCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAA > SRR4302536.4014373/1‑94 (MQ=60)
CCGCTTTAAAGCAATCGCCTGCCTTCTCGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAAT < SRR4302536.5552012/94‑1 (MQ=60)
CCGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAAT > SRR4302536.2769498/1‑94 (MQ=60)
CGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATA > SRR4302536.1482963/1‑94 (MQ=60)
CGCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATA < SRR4302536.2709875/94‑1 (MQ=60)
GCTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATAT < SRR4302536.6507019/94‑1 (MQ=60)
CTTTAAAGCGATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATA < SRR4302536.1395272/94‑1 (MQ=60)
CTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATA < SRR4302536.809477/94‑1 (MQ=60)
CTTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATA > SRR4302536.2173277/1‑94 (MQ=60)
TTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAA < SRR4302536.1611950/94‑1 (MQ=60)
TTTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAA < SRR4302536.3133316/94‑1 (MQ=60)
TTAAAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAAC < SRR4302536.4826427/94‑1 (MQ=60)
AAGCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCA > SRR4302536.1372462/1‑94 (MQ=60)
AAGAAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCA > SRR4302536.4959146/1‑94 (MQ=60)
GCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATG < SRR4302536.5051714/94‑1 (MQ=60)
GCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATG < SRR4302536.4415917/94‑1 (MQ=60)
GCAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATG > SRR4302536.5948391/1‑94 (MQ=60)
ACAATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATG < SRR4302536.4707552/94‑1 (MQ=60)
AATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGAC > SRR4302536.4933297/1‑94 (MQ=60)
ATCGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACT < SRR4302536.3173118/94‑1 (MQ=60)
CGCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTC > SRR4302536.1657545/1‑94 (MQ=60)
GCCTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCT > SRR4302536.13037/1‑94 (MQ=60)
CTGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGA > SRR4302536.4042411/1‑94 (MQ=60)
TGCCTTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAA < SRR4302536.1898753/94‑1 (MQ=60)
CCTTCACGCCTAATATGTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAA < SRR4302536.3748269/94‑1 (MQ=60)
TTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACA > SRR4302536.2362243/1‑94 (MQ=60)
TTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACA > SRR4302536.4902855/1‑94 (MQ=60)
TTCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACA < SRR4302536.6274454/94‑1 (MQ=60)
TCACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACAT < SRR4302536.4802029/94‑1 (MQ=60)
CACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATA < SRR4302536.5475132/94‑1 (MQ=60)
ACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAG < SRR4302536.3624792/94‑1 (MQ=60)
ACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAG > SRR4302536.613983/1‑94 (MQ=60)
ACGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAG < SRR4302536.4125448/94‑1 (MQ=60)
CGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGG < SRR4302536.3520171/94‑1 (MQ=60)
CGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGG < SRR4302536.6274604/94‑1 (MQ=60)
CGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGG > SRR4302536.5046375/1‑94 (MQ=60)
CGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGG < SRR4302536.4727554/94‑1 (MQ=60)
|
CAATGGAATCCAGCATTAAGCCAATCACAAGGCCAATGCCAACAAAGCCAATCCCGATATGCAGACCCGCTTTAAAGCAATCGCCTGCCTTCATGCCTAATATTTTAGAAAAAATAATGATGACAATCGGCAGCATCACCGTAGGGCCGAGGTCGAGAATATAACGCATGACTTCTGAAAACATAGG > NC_000913/2172115‑2172301
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
