Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	1475	266.7	13469680	98.2%	13227225	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,317,837	T→C	A4A (GCA→GCG)	rcsC ←	RcsC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,317,837	0	T	C	99.7%	1108.4 / NA	338	A4A (GCA→GCG)	rcsC	RcsC
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (174/163); minor base G (1/0); total (175/163)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 342 total aligned reads displayed.

CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAATGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAT  >  NC_000913/2317747‑2317926

cTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGc                                                                                         <  2:4218953/93‑1 (MQ=255)

cTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGc                                                                                         <  2:1837839/93‑1 (MQ=255)

cTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGc                                                                                         >  1:832931/1‑93 (MQ=255)

cTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGc                                                                                         <  2:111740/93‑1 (MQ=255)

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        <  2:5102611/93‑1 (MQ=255)

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        >  1:5846639/1‑93 (MQ=255)

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        >  2:2106628/1‑93 (MQ=255)

 tGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGct                                                                                        >  1:6539168/1‑93 (MQ=255)

  gACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGctc                                                                                       <  1:2197977/93‑1 (MQ=255)

  gACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGctc                                                                                       >  1:4666667/1‑93 (MQ=255)

   aCGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGctct                                                                                      >  1:1725570/1‑93 (MQ=255)

   aCGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGctct                                                                                      <  1:5953884/93‑1 (MQ=255)

    cGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTg                                                                                     <  1:6664941/93‑1 (MQ=255)

       aTTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAAc                                                                                  >  1:873344/1‑93 (MQ=255)

       aTTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAAc                                                                                  >  2:4401057/1‑93 (MQ=255)

         ttCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAt                                                                                >  1:1924327/1‑93 (MQ=255)

         ttCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAt                                                                                <  1:3060425/93‑1 (MQ=255)

         ttCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAt                                                                                <  1:6387055/93‑1 (MQ=255)

         ttCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAt                                                                                >  2:2427415/1‑93 (MQ=255)

           ccGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGt                                                                              >  1:4454113/1‑93 (MQ=255)

            cGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGTAAAAGCAATCAACAGCCAGAGCACTAACGTCAACGCTCTGAACATGTa                                                                             >  1:6728411/1‑93 (MQ=255)

            cGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTa                                                                             <  1:111901/93‑1 (MQ=255)

            cGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTa                                                                             <  1:2982140/93‑1 (MQ=255)

              aTTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGATCATGTAgc                                                                           <  1:6525263/93‑1 (MQ=255)

              aTTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAgc                                                                           <  1:4956332/93‑1 (MQ=255)

               ttCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAgcg                                                                          >  2:2989823/1‑93 (MQ=255)

               ttCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAgcg                                                                          >  2:1672574/1‑93 (MQ=255)

                  tcGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGa                                                                       >  2:2596957/1‑93 (MQ=255)

                   cGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAg                                                                      <  2:6065292/93‑1 (MQ=255)

                    gCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAgg                                                                     >  2:1779555/1‑93 (MQ=255)

                     cTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGc                                                                    <  1:1257951/93‑1 (MQ=255)

                      tGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCt                                                                   <  2:476210/93‑1 (MQ=255)

                      tGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCt                                                                   <  1:3997946/93‑1 (MQ=255)

                      tGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCt                                                                   >  1:3169250/1‑93 (MQ=255)

                        aTGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCttt                                                                 >  2:499584/1‑93 (MQ=255)

                          gTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCa                                                               >  1:3852012/1‑93 (MQ=255)

                            aaCGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAgg                                                             <  2:3823454/93‑1 (MQ=255)

                            aaCGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAgg                                                             >  1:4188281/1‑93 (MQ=255)

                             aCGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAggg                                                            <  2:4578790/93‑1 (MQ=255)

                               gCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGtt                                                          <  2:5636191/93‑1 (MQ=255)

                               gCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGtt                                                          <  1:3495119/93‑1 (MQ=255)

                               gCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGtt                                                          >  2:837041/1‑93 (MQ=255)

                                cATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTg                                                         <  2:5599021/93‑1 (MQ=255)

                                 aTTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGt                                                        <  1:1541906/93‑1 (MQ=255)

                                   tAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAc                                                      <  2:5924472/93‑1 (MQ=255)

                                   tAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAc                                                      <  2:1181353/93‑1 (MQ=255)

                                   tAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAc                                                      <  2:1473635/93‑1 (MQ=255)

                                     aCGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGa                                                    <  2:2467451/93‑1 (MQ=255)

                                        aTGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGaaaa                                                 <  1:5712065/93‑1 (MQ=255)

                                        aTGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGaaaa                                                 <  2:2003271/93‑1 (MQ=255)

                                          gTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaaga                                               >  2:6466130/1‑93 (MQ=255)

                                           tAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaagaa                                              <  1:5754983/93‑1 (MQ=255)

                                           tAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaagaa                                              <  2:3087061/93‑1 (MQ=255)

                                            aaaaaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAaagaag                                             <  2:2512806/93‑1 (MQ=255)

                                               aaaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCaa                                          <  2:3925863/93‑1 (MQ=255)

                                                aaCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAg                                         <  1:1967515/93‑1 (MQ=255)

                                                aaCGAAGGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAGGTAGCGCGAGGCTTTCAGGGTGGTACGAAAAGAAGCAAg                                         <  2:3204635/93‑1 (MQ=255)

                                                 aCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAgg                                        >  2:4384401/1‑93 (MQ=255)

                                                 aCGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAgg                                        >  1:5336371/1‑93 (MQ=255)

                                                   ggATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTa                                      <  1:5172040/93‑1 (MQ=255)

                                                   ggATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTa                                      >  2:3443646/1‑93 (MQ=255)

                                                     aTGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAtt                                    <  1:4517415/93‑1 (MQ=255)

                                                     aTGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAtt                                    <  1:2606784/93‑1 (MQ=255)

                                                     aTGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAtt                                    <  1:3327516/93‑1 (MQ=255)

                                                      tGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAttt                                   <  1:6146234/93‑1 (MQ=255)

                                                      tGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAttt                                   >  2:864709/1‑93 (MQ=255)

                                                       gAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTc                                  >  2:371632/1‑93 (MQ=255)

                                                         aaaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaa                                >  1:1665672/1‑93 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               >  1:2126341/1‑93 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               <  2:6260472/93‑1 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               >  1:3189623/1‑93 (MQ=255)

                                                          aaaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCaaa                               >  1:5577963/1‑93 (MQ=255)

                                                           aaGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAg                              >  2:2857297/1‑93 (MQ=255)

                                                            aGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAgg                             >  2:5478207/1‑93 (MQ=255)

                                                            aGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAgg                             <  2:6556069/93‑1 (MQ=255)

                                                             gCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAggg                            <  1:3909764/93‑1 (MQ=255)

                                                             gCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAggg                            >  1:138738/1‑93 (MQ=255)

                                                             gCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAggg                            >  1:5671739/1‑93 (MQ=255)

                                                               aaTCAACAGCCAGAGCACTAACGCCAACGATCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGc                          >  2:6643411/1‑93 (MQ=255)

                                                                  cAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGaa                       <  2:753019/93‑1 (MQ=255)

                                                                  cAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGaa                       >  2:6196372/1‑93 (MQ=255)

                                                                  cAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGaa                       <  2:2290716/93‑1 (MQ=255)

                                                                   aaCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAg                      >  1:1780410/1‑93 (MQ=255)

                                                                    aCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGc                     <  1:3598095/93‑1 (MQ=255)

                                                                    aCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGc                     >  1:627009/1‑93 (MQ=255)

                                                                    aCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGc                     >  1:24691/1‑93 (MQ=255)

                                                                    aCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGc                     <  2:1890321/93‑1 (MQ=255)

                                                                      aGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGCAGCAAGGCATTTCAAAGGGGCGAAGCTc                   >  2:1265496/1‑93 (MQ=255)

                                                                      aGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTc                   >  2:2948502/1‑93 (MQ=255)

                                                                       gCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTcc                  >  2:154736/1‑93 (MQ=255)

                                                                       gCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTcc                  >  1:2642023/1‑93 (MQ=255)

                                                                         cAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGc                >  2:5274995/1‑93 (MQ=255)

                                                                         cAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGc                <  2:5826225/93‑1 (MQ=255)

                                                                           gagCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCt              >  2:4267778/1‑93 (MQ=255)

                                                                             gCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCa            >  1:1003161/1‑93 (MQ=255)

                                                                             gCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCa            >  1:4335082/1‑93 (MQ=255)

                                                                                 tAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTg        >  1:5995421/1‑93 (MQ=255)

                                                                                   aCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGAc      <  2:3614865/93‑1 (MQ=255)

                                                                                     gCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCg    >  2:403363/1‑93 (MQ=255)

                                                                                       cAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAt  <  1:4856018/93‑1 (MQ=255)

CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAATGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGAT  >  NC_000913/2317747‑2317926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTCCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAATGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGGAG  >  NC_000913/2317744‑2317930

TTCCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAAC                                                                                               <  SRR4302536.539689/94‑1 (MQ=60)

TTCCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAAC                                                                                               <  SRR4302536.2090077/94‑1 (MQ=60)

 TCCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACG                                                                                              <  SRR4302536.1244885/94‑1 (MQ=60)

  CGTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGC                                                                                             <  SRR4302536.2683497/94‑1 (MQ=60)

  CCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGC                                                                                             >  SRR4302536.857435/1‑94 (MQ=60)

  CCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGC                                                                                             <  SRR4302536.5101172/94‑1 (MQ=60)

   CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCT                                                                                            >  SRR4302536.6733927/1‑94 (MQ=60)

   CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCT                                                                                            <  SRR4302536.397560/94‑1 (MQ=60)

   CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCT                                                                                            <  SRR4302536.650284/94‑1 (MQ=60)

   CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCT                                                                                            <  SRR4302536.6674889/94‑1 (MQ=60)

   CTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCT                                                                                            >  SRR4302536.6020829/1‑94 (MQ=60)

    TGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTC                                                                                           >  SRR4302536.6771040/1‑94 (MQ=60)

    TGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTC                                                                                           >  SRR4302536.4806984/1‑94 (MQ=60)

    TGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTC                                                                                           >  SRR4302536.2647470/1‑94 (MQ=60)

     GACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCT                                                                                          >  SRR4302536.1775404/1‑94 (MQ=60)

     GACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCT                                                                                          <  SRR4302536.2264330/94‑1 (MQ=60)

      ACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTG                                                                                         <  SRR4302536.6131260/94‑1 (MQ=60)

       CGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGA                                                                                        <  SRR4302536.6863023/94‑1 (MQ=60)

         AATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAAC                                                                                      >  SRR4302536.899071/1‑94 (MQ=60)

         AATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAAC                                                                                      <  SRR4302536.4788159/94‑1 (MQ=60)

          ATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACA                                                                                     >  SRR4302536.4468636/1‑94 (MQ=60)

           TTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACAT                                                                                    >  SRR4302536.1982229/1‑94 (MQ=60)

            TTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATG                                                                                   <  SRR4302536.3150226/94‑1 (MQ=60)

            TTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATG                                                                                   >  SRR4302536.3745096/1‑94 (MQ=60)

            TTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATG                                                                                   <  SRR4302536.6577612/94‑1 (MQ=60)

            TTCCGATGCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATG                                                                                   <  SRR4302536.6209655/94‑1 (MQ=60)

             TCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGT                                                                                  >  SRR4302536.3508454/1‑94 (MQ=60)

             TCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGT                                                                                  >  SRR4302536.4587916/1‑94 (MQ=60)

              CCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGTAAAAGCAATCAACAGCCAGAGCACTAACGTCAACGCTCTGAACATGTA                                                                                 >  SRR4302536.6928346/1‑94 (MQ=60)

              CCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTA                                                                                 >  SRR4302536.1818622/1‑94 (MQ=60)

              CCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTA                                                                                 <  SRR4302536.4978588/94‑1 (MQ=60)

              CCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTA                                                                                 <  SRR4302536.2008391/94‑1 (MQ=60)

               CGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAG                                                                                <  SRR4302536.567316/94‑1 (MQ=60)

               CGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAG                                                                                <  SRR4302536.1137320/94‑1 (MQ=60)

               CGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAG                                                                                <  SRR4302536.3069913/94‑1 (MQ=60)

               CGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAG                                                                                <  SRR4302536.114859/94‑1 (MQ=60)

               CGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAG                                                                                >  SRR4302536.2170435/1‑94 (MQ=60)

               CGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAG                                                                                <  SRR4302536.671672/94‑1 (MQ=60)

                GATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGC                                                                               <  SRR4302536.5871130/94‑1 (MQ=60)

                GATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGC                                                                               >  SRR4302536.326191/1‑94 (MQ=60)

                 ATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGATCATGTAGCG                                                                              <  SRR4302536.6719630/94‑1 (MQ=60)

                 ATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCG                                                                              >  SRR4302536.5416008/1‑94 (MQ=60)

                 ATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCG                                                                              <  SRR4302536.141607/94‑1 (MQ=60)

                 ATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCG                                                                              >  SRR4302536.1234468/1‑94 (MQ=60)

                 ATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCG                                                                              <  SRR4302536.5105261/94‑1 (MQ=60)

                 ATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCG                                                                              <  SRR4302536.5061952/94‑1 (MQ=60)

                 ATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCG                                                                              <  SRR4302536.6054169/94‑1 (MQ=60)

                    CTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGA                                                                           >  SRR4302536.4451435/1‑94 (MQ=60)

                    CTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGA                                                                           >  SRR4302536.329772/1‑94 (MQ=60)

                    CTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGA                                                                           >  SRR4302536.855350/1‑94 (MQ=60)

                      CGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGG                                                                         >  SRR4302536.6463376/1‑94 (MQ=60)

                        CTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCT                                                                       >  SRR4302536.1588259/1‑94 (MQ=60)

                        CTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCT                                                                       <  SRR4302536.1295690/94‑1 (MQ=60)

                        CTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCT                                                                       >  SRR4302536.3262105/1‑94 (MQ=60)

                        CTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCT                                                                       <  SRR4302536.4603603/94‑1 (MQ=60)

                         TGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTT                                                                      <  SRR4302536.4116579/94‑1 (MQ=60)

                         TGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTT                                                                      >  SRR4302536.2198793/1‑94 (MQ=60)

                         TGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTT                                                                      <  SRR4302536.882231/94‑1 (MQ=60)

                          GATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTT                                                                     <  SRR4302536.1907931/94‑1 (MQ=60)

                          GATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTT                                                                     <  SRR4302536.4468515/94‑1 (MQ=60)

                          GATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTT                                                                     <  SRR4302536.3535028/94‑1 (MQ=60)

                           ATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTC                                                                    >  SRR4302536.5735044/1‑94 (MQ=60)

                            TGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCA                                                                   >  SRR4302536.3966680/1‑94 (MQ=60)

                            TGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCA                                                                   >  SRR4302536.2220594/1‑94 (MQ=60)

                              TAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGG                                                                 <  SRR4302536.5083085/94‑1 (MQ=60)

                              TAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGG                                                                 >  SRR4302536.4312734/1‑94 (MQ=60)

                               AACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGG                                                                <  SRR4302536.4075714/94‑1 (MQ=60)

                                ACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGT                                                               >  SRR4302536.5800919/1‑94 (MQ=60)

                                 CGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTACCGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTT                                                              <  SRR4302536.6772855/94‑1 (MQ=60)

                                 CGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTT                                                              <  SRR4302536.2989078/94‑1 (MQ=60)

                                 CGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTT                                                              >  SRR4302536.1553733/1‑94 (MQ=60)

                                  GCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTG                                                             <  SRR4302536.3599404/94‑1 (MQ=60)

                                    ATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTA                                                           >  SRR4302536.5292143/1‑94 (MQ=60)

                                    ATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTA                                                           >  SRR4302536.2002435/1‑94 (MQ=60)

                                    ATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTA                                                           <  SRR4302536.1587232/94‑1 (MQ=60)

                                     TTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAC                                                          <  SRR4302536.459585/94‑1 (MQ=60)

                                     TTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTAC                                                          <  SRR4302536.99349/94‑1 (MQ=60)

                                      TAACGATGTACAAAACGGATGAAAAGGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACG                                                         <  SRR4302536.4904295/94‑1 (MQ=60)

                                      TAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACG                                                         <  SRR4302536.2400060/94‑1 (MQ=60)

                                        ACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAA                                                       <  SRR4302536.3267372/94‑1 (MQ=60)

                                        ACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAA                                                       <  SRR4302536.6032542/94‑1 (MQ=60)

                                          GATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAA                                                     >  SRR4302536.4042516/1‑94 (MQ=60)

                                           ATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAG                                                    <  SRR4302536.5881939/94‑1 (MQ=60)

                                            TGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGA                                                   >  SRR4302536.5284127/1‑94 (MQ=60)

                                             GTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAA                                                  >  SRR4302536.1751436/1‑94 (MQ=60)

                                             GTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAA                                                  <  SRR4302536.5868817/94‑1 (MQ=60)

                                              TAAAAAAGAGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAG                                                 <  SRR4302536.6162480/94‑1 (MQ=60)

                                              TAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAG                                                 <  SRR4302536.5926180/94‑1 (MQ=60)

                                              TAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAG                                                 <  SRR4302536.2365195/94‑1 (MQ=60)

                                              TAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAG                                                 >  SRR4302536.4967180/1‑94 (MQ=60)

                                               AAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGC                                                >  SRR4302536.3521746/1‑94 (MQ=60)

                                                 AAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAA                                              >  SRR4302536.5901925/1‑94 (MQ=60)

                                                  AAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAG                                             <  SRR4302536.2526880/94‑1 (MQ=60)

                                                  AAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAG                                             >  SRR4302536.5895686/1‑94 (MQ=60)

                                                   AACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGG                                            >  SRR4302536.5495818/1‑94 (MQ=60)

                                                   AACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGG                                            >  SRR4302536.217300/1‑94 (MQ=60)

                                                   AACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGA                                            <  SRR4302536.2026677/94‑1 (MQ=60)

                                                     CGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTA                                          >  SRR4302536.3232174/1‑94 (MQ=60)

                                                     CGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTA                                          >  SRR4302536.4549340/1‑94 (MQ=60)

                                                      GGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAT                                         >  SRR4302536.1809991/1‑94 (MQ=60)

                                                      GGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAT                                         <  SRR4302536.3136716/94‑1 (MQ=60)

                                                      GGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTAT                                         <  SRR4302536.5326348/94‑1 (MQ=60)

                                                       GATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATT                                        <  SRR4302536.5788104/94‑1 (MQ=60)

                                                       GATAAAAAAGCAATCAGCAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATT                                        <  SRR4302536.3651878/94‑1 (MQ=60)

                                                        ATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTT                                       <  SRR4302536.3425975/94‑1 (MQ=60)

                                                        ATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTT                                       >  SRR4302536.3412032/1‑94 (MQ=60)

                                                        ATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTT                                       <  SRR4302536.4652908/94‑1 (MQ=60)

                                                        ATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTT                                       <  SRR4302536.4400160/94‑1 (MQ=60)

                                                        ATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTT                                       >  SRR4302536.6879184/1‑94 (MQ=60)

                                                        ATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTT                                       >  SRR4302536.6885706/1‑94 (MQ=60)

                                                        ATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTT                                       <  SRR4302536.2685013/94‑1 (MQ=60)

                                                         TGAAAAAGCAATCAACAGCCAGAGCACTAACTCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTC                                      >  SRR4302536.2996132/1‑94 (MQ=60)

                                                         TGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTC                                      <  SRR4302536.6329350/94‑1 (MQ=60)

                                                          gcaaaaactaaccaccggCAGAGCCCTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCA                                     <  SRR4302536.1553505/76‑1 (MQ=60)

                                                          GAAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCA                                     <  SRR4302536.6709416/94‑1 (MQ=60)

                                                           AAAAAGCAATCAACAGCCAGAGCACTAACGCCCACGCTCTGACCATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAA                                    >  SRR4302536.6914350/1‑94 (MQ=60)

                                                           AAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAA                                    >  SRR4302536.88060/1‑94 (MQ=60)

                                                           AAAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAA                                    >  SRR4302536.1714004/1‑94 (MQ=60)

                                                           AAAAAGCAATCAACAGCCAGAGCACTAACGCCAACACTCTGACCATGTAGCGCGAGCCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAA                                    >  SRR4302536.5678774/1‑94 (MQ=60)

                                                            AAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAA                                   >  SRR4302536.5743979/1‑94 (MQ=60)

                                                            AAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAA                                   >  SRR4302536.1172007/1‑94 (MQ=60)

                                                            AAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAA                                   >  SRR4302536.2190200/1‑94 (MQ=60)

                                                            AAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAA                                   >  SRR4302536.3283144/1‑94 (MQ=60)

                                                            AAAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTAAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAA                                   >  SRR4302536.1150780/1‑94 (MQ=60)

                                                             AAAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAG                                  <  SRR4302536.3206447/94‑1 (MQ=60)

                                                              AAGCAATCAACAGCCAGAGCACTACCGCCAACGCTCTGCACATGTAGCGCGAGGCTTTCCGGGTTGTACGAAAAGAAGCAAGCTATTTCAAAGG                                 >  SRR4302536.3258871/1‑94 (MQ=60)

                                                              AAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCCAGGTATTTCAAAGG                                 <  SRR4302536.6798553/94‑1 (MQ=60)

                                                              AAGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGG                                 <  SRR4302536.3781194/94‑1 (MQ=60)

                                                               AGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGG                                >  SRR4302536.142360/1‑94 (MQ=60)

                                                               AGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGG                                <  SRR4302536.5848152/94‑1 (MQ=60)

                                                               AGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGG                                <  SRR4302536.1680138/94‑1 (MQ=60)

                                                               AGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGG                                <  SRR4302536.6525533/94‑1 (MQ=60)

                                                               AGCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGG                                >  SRR4302536.5840340/1‑94 (MQ=60)

                                                                GCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGG                               <  SRR4302536.2728105/94‑1 (MQ=60)

                                                                GCAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGG                               <  SRR4302536.4025981/94‑1 (MQ=60)

                                                                GCAATAAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTGCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGG                               <  SRR4302536.4679663/94‑1 (MQ=60)

                                                                 CAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGC                              <  SRR4302536.1674027/94‑1 (MQ=60)

                                                                 CAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGC                              >  SRR4302536.6387542/1‑94 (MQ=60)

                                                                 CAATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTACTTCAAAGGGGC                              >  SRR4302536.6348609/1‑94 (MQ=60)

                                                                  AATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCG                             >  SRR4302536.2703687/1‑94 (MQ=60)

                                                                   ATCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGA                            <  SRR4302536.6105590/94‑1 (MQ=60)

                                                                    TCAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAA                           <  SRR4302536.6168422/94‑1 (MQ=60)

                                                                     CAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAG                          <  SRR4302536.5457680/94‑1 (MQ=60)

                                                                     CAACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAG                          >  SRR4302536.1834235/1‑94 (MQ=60)

                                                                      AACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGC                         >  SRR4302536.645601/1‑94 (MQ=60)

                                                                      AACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGC                         >  SRR4302536.188072/1‑94 (MQ=60)

                                                                      AACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGC                         >  SRR4302536.25379/1‑94 (MQ=60)

                                                                      AACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGC                         >  SRR4302536.6318110/1‑94 (MQ=60)

                                                                      AACAGCAAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGC                         <  SRR4302536.5094217/94‑1 (MQ=60)

                                                                       ACAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCT                        <  SRR4302536.3705689/94‑1 (MQ=60)

                                                                        CAGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTC                       >  SRR4302536.40212/1‑94 (MQ=60)

                                                                         AGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCC                      >  SRR4302536.3774455/1‑94 (MQ=60)

                                                                         AGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCC                      >  SRR4302536.2721207/1‑94 (MQ=60)

                                                                         AGCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCC                      >  SRR4302536.1021532/1‑94 (MQ=60)

                                                                          GCCAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCG                     <  SRR4302536.3696136/94‑1 (MQ=60)

                                                                            CAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCC                   <  SRR4302536.4156623/94‑1 (MQ=60)

                                                                            CAGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCC                   >  SRR4302536.2153282/1‑94 (MQ=60)

                                                                             AGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCT                  >  SRR4302536.6733079/1‑94 (MQ=60)

                                                                             AGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCT                  >  SRR4302536.4667999/1‑94 (MQ=60)

                                                                             AGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCT                  >  SRR4302536.6221484/1‑94 (MQ=60)

                                                                             AGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCT                  >  SRR4302536.840291/1‑94 (MQ=60)

                                                                             AGAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCT                  >  SRR4302536.1310612/1‑94 (MQ=60)

                                                                              GAGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTC                 >  SRR4302536.1538501/1‑94 (MQ=60)

                                                                               AGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCA                >  SRR4302536.1032762/1‑94 (MQ=60)

                                                                               AGCACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCA                >  SRR4302536.4464917/1‑94 (MQ=60)

                                                                                 CACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGG              <  SRR4302536.5561034/94‑1 (MQ=60)

                                                                                  ACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGT             <  SRR4302536.1742423/94‑1 (MQ=60)

                                                                                  ACTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGT             >  SRR4302536.3121204/1‑94 (MQ=60)

                                                                                   CTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTG            >  SRR4302536.6174146/1‑94 (MQ=60)

                                                                                   CTAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTG            <  SRR4302536.798583/94‑1 (MQ=60)

                                                                                    TAACGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGA           >  SRR4302536.2633880/1‑94 (MQ=60)

                                                                                       CGCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCG        <  SRR4302536.591230/94‑1 (MQ=60)

                                                                                        GCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGA       >  SRR4302536.1344352/1‑94 (MQ=60)

                                                                                        GCCAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGA       <  SRR4302536.1955549/94‑1 (MQ=60)

                                                                                          CAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATG     <  SRR4302536.4001238/94‑1 (MQ=60)

                                                                                          CAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATG     >  SRR4302536.3302191/1‑94 (MQ=60)

                                                                                          CAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATG     <  SRR4302536.5002141/94‑1 (MQ=60)

                                                                                          CAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATG     >  SRR4302536.2825814/1‑94 (MQ=60)

                                                                                          CAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATG     <  SRR4302536.2704330/94‑1 (MQ=60)

                                                                                          CAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATG     >  SRR4302536.2314398/1‑94 (MQ=60)

                                                                                          CAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATG     <  SRR4302536.5994039/94‑1 (MQ=60)

                                                                                          CAACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATG     >  SRR4302536.1876126/1‑94 (MQ=60)

                                                                                          CAACGCTCTGAACATGTAGCGCGAGGATTGCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATG     <  SRR4302536.4211388/94‑1 (MQ=60)

                                                                                           AACGCTCTGAACATGTAGCGCGAGTCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGG    <  SRR4302536.5770308/94‑1 (MQ=60)

                                                                                           AACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGG    <  SRR4302536.1691310/94‑1 (MQ=60)

                                                                                            ACGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGGA   <  SRR4302536.6560218/94‑1 (MQ=60)

                                                                                             CGCTCTGAACATGTAGCGCGAGGTTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGGAG  <  SRR4302536.624877/94‑1 (MQ=60)

                                                                                             CGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGGAG  <  SRR4302536.4181498/94‑1 (MQ=60)

                                                                                             CGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGGAG  >  SRR4302536.5145988/1‑94 (MQ=60)

                                                                                             CGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGGAG  >  SRR4302536.2293408/1‑94 (MQ=60)

TTCCTGACGAATTTCCGATTCTCGCTGATGTAACGCATTAACGATGTAAAAAACGGATGAAAAAGCAATCAACAGCCAGAGCACTAACGCCAATGCTCTGAACATGTAGCGCGAGGCTTTCAGGGTTGTACGAAAAGAAGCAAGGTATTTCAAAGGGGCGAAGCTCCGCCTCAGGTGACCGATGGAG  >  NC_000913/2317744‑2317930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 7 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`