Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,343,608 |
A→G |
S242G (AGC→GGC) |
nrdA → |
ribonucleoside diphosphate reductase 1 alpha subunit, B1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,343,608 | 0 | A | G | 99.5%
| 695.0
/ ‑5.1
| 216 | S242G (AGC→GGC) | nrdA | ribonucleoside diphosphate reductase 1 alpha subunit, B1 |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (102/113); total (103/113) |
| Fisher's exact test for biased strand distribution p-value = 4.77e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.05e-01 |
Only 100 of 220 total aligned reads displayed.
ATGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCAGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGG > NC_000913/2343518‑2343696
|
aTGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGgc < 1:1445905/93‑1 (MQ=255)
aTGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGgc > 1:805792/1‑93 (MQ=255)
aTGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGgc > 1:4994383/1‑93 (MQ=255)
tGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGgcg > 1:2067420/1‑93 (MQ=255)
gTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTGCTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGgcgc > 2:3568629/1‑93 (MQ=255)
ccGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGa < 2:4552161/93‑1 (MQ=255)
ccGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGa < 1:2916950/93‑1 (MQ=255)
cGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGGTCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGAt < 1:929412/93‑1 (MQ=255)
gcgtgcgtACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTg > 1:4280656/1‑93 (MQ=255)
cgtgcatACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGt < 1:4796/93‑1 (MQ=255)
gtgcgtACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGtt > 2:2792536/1‑93 (MQ=255)
cgtACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTaaa < 2:5730405/93‑1 (MQ=255)
gtACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAAt < 2:3353306/93‑1 (MQ=255)
tACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATa < 1:4655457/93‑1 (MQ=255)
cccGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGt < 1:2203963/93‑1 (MQ=255)
ccGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGtt > 2:6062670/1‑93 (MQ=255)
ccGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGtt < 2:5964537/93‑1 (MQ=255)
ccGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGtt < 1:4838707/93‑1 (MQ=255)
cGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACACCACCTCCGGCGCGATTGTTAAATACGttt < 1:3691512/93‑1 (MQ=255)
gACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTc > 2:3986076/1‑93 (MQ=255)
gACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTc < 2:4497600/93‑1 (MQ=255)
cTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTccc > 2:5204792/1‑93 (MQ=255)
cTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTccc < 1:448510/93‑1 (MQ=255)
cTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTccc > 1:2268802/1‑93 (MQ=255)
tCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCa > 1:305430/1‑93 (MQ=255)
gTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGc < 2:5351532/93‑1 (MQ=255)
gTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCAGCGCGATTGTTAAATACGTTTCCCAGc > 2:4879383/1‑93 (MQ=255)
cAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGt > 1:3552248/1‑93 (MQ=255)
cAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGt < 2:2561014/93‑1 (MQ=255)
cAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGt < 2:6672391/93‑1 (MQ=255)
tCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCg > 2:1305777/1‑93 (MQ=255)
cAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACATCCGGCGCGATTGTTAAATACGTTTCACAGCGTGCCgg > 2:1760673/1‑93 (MQ=255)
cgCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCCCCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCggg < 1:1146595/92‑1 (MQ=255)
aGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCggg > 2:1053971/1‑93 (MQ=255)
gCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGa > 1:5769239/1‑93 (MQ=255)
gCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGa > 2:6637702/1‑93 (MQ=255)
gCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGa > 1:1335184/1‑93 (MQ=255)
cTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGAt < 2:4563161/93‑1 (MQ=255)
cTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGAt < 1:5440042/93‑1 (MQ=255)
cTCCTGCGTACTGATCGAGTGCGGTAACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGAt < 1:3824888/93‑1 (MQ=255)
tCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATc < 2:6452086/93‑1 (MQ=255)
ccTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCg > 2:3151035/1‑93 (MQ=255)
tGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGc < 2:2270359/93‑1 (MQ=255)
gCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCa < 1:5920233/93‑1 (MQ=255)
gTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATc < 2:4605166/93‑1 (MQ=255)
gTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATc < 1:5848536/93‑1 (MQ=255)
gTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATc < 2:5678954/93‑1 (MQ=255)
tcTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCaa < 2:690666/92‑1 (MQ=255)
aCTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCaa < 2:626102/93‑1 (MQ=255)
tGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACg < 1:3934635/93‑1 (MQ=255)
gctCGAGTGCGGTGACAGCCTGGATTCCATCAACGGCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGc < 2:1702455/91‑1 (MQ=255)
aTCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGcc > 2:2948719/1‑93 (MQ=255)
tCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCg < 1:6128688/93‑1 (MQ=255)
tCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCg < 2:2381642/93‑1 (MQ=255)
cGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCgg < 2:3657605/93‑1 (MQ=255)
cGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCgg > 1:4115987/1‑93 (MQ=255)
cGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCgg < 1:536695/93‑1 (MQ=255)
gAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCggg > 2:571642/1‑93 (MQ=255)
gAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCggg > 1:3220303/1‑93 (MQ=255)
gAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCggg < 2:3440146/93‑1 (MQ=255)
aGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGc < 1:472819/93‑1 (MQ=255)
aGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGc < 1:2470915/93‑1 (MQ=255)
gTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCg > 2:2808816/1‑93 (MQ=255)
cGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTAt < 2:1954473/93‑1 (MQ=255)
cGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTAt < 1:6575602/93‑1 (MQ=255)
cGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTAt > 2:6512871/1‑93 (MQ=255)
ggTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTAtt < 2:2309500/93‑1 (MQ=255)
tGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCg < 2:5362985/93‑1 (MQ=255)
tGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCg < 2:1512806/93‑1 (MQ=255)
gACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGt > 1:5691550/1‑93 (MQ=255)
gACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGt > 1:3026364/1‑93 (MQ=255)
cAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTgc < 1:3864064/93‑1 (MQ=255)
cAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTgc < 1:1874425/93‑1 (MQ=255)
cAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTgc < 2:1621301/93‑1 (MQ=255)
aGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTgcg > 2:3911516/1‑93 (MQ=255)
ccTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCt < 2:171882/93‑1 (MQ=255)
cTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTg > 2:4676264/1‑93 (MQ=255)
cTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAAAGCCGGGCGTATTTGTGCGCTg > 1:2325628/1‑93 (MQ=255)
tGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTgg > 2:1627/1‑93 (MQ=255)
tGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTgg < 1:5185729/93‑1 (MQ=255)
tGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTgg > 2:3269344/1‑93 (MQ=255)
aTTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTa > 1:5950300/1‑93 (MQ=255)
tCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGc < 2:6297916/93‑1 (MQ=255)
ccATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGcc > 2:1249225/1‑93 (MQ=255)
cATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGccc > 1:2003003/1‑93 (MQ=255)
cATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGccc > 2:1458037/1‑93 (MQ=255)
cATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGccc > 2:5880717/1‑93 (MQ=255)
tCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGa > 2:4490385/1‑93 (MQ=255)
cAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGAt > 1:2147673/1‑93 (MQ=255)
cAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGAt < 2:3047674/93‑1 (MQ=255)
aaCGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGAtt > 2:5758035/1‑93 (MQ=255)
aCGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGCGCGTATTCGTGCGCTGGGTAGCCCGATTc > 1:5275106/1‑93 (MQ=255)
gCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTcgc < 2:5765002/93‑1 (MQ=255)
ccACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTcgcg < 2:1506435/93‑1 (MQ=255)
ccACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTcgcg > 2:2051661/1‑93 (MQ=255)
ccACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTcgcg > 2:2440171/1‑93 (MQ=255)
aCCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCggt < 1:2911719/93‑1 (MQ=255)
aCCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGCATTCGTGCGCTGGGTAGCCCGATTCGCggt > 1:4346983/1‑93 (MQ=255)
ccTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCggtg < 2:2590220/93‑1 (MQ=255)
cTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCggtgg > 1:5342309/1‑93 (MQ=255)
|
ATGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCAGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGG > NC_000913/2343518‑2343696
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCATGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCAGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGGTGAAG > NC_000913/2343515‑2343701
|
ATCATGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCG > SRR4302536.6279823/1‑94 (MQ=60)
ATCATGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCG > SRR4302536.6261364/1‑94 (MQ=60)
CATGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGC > SRR4302536.829423/1‑94 (MQ=60)
CATGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGC > SRR4302536.5144285/1‑94 (MQ=60)
ATGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCG < SRR4302536.1488755/94‑1 (MQ=60)
ATGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCG > SRR4302536.2129700/1‑94 (MQ=60)
CCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGAT < SRR4302536.3003050/94‑1 (MQ=60)
CGGCGTGCGTGCCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATT < SRR4302536.1760604/94‑1 (MQ=60)
CGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGGTCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATT < SRR4302536.956800/94‑1 (MQ=60)
GGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTG > SRR4302536.4408367/1‑94 (MQ=60)
CGTGCGTCCCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTT < SRR4302536.49925/94‑1 (MQ=60)
CGTGCATACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTT < SRR4302536.4917/94‑1 (MQ=60)
TGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAA < SRR4302536.4475032/94‑1 (MQ=60)
CGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAAT > SRR4302536.6111560/1‑94 (MQ=60)
GTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATA < SRR4302536.2520453/94‑1 (MQ=60)
TACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATAC > SRR4302536.4557410/1‑94 (MQ=60)
TACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATAC < SRR4302536.4795432/94‑1 (MQ=60)
ACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACG > SRR4302536.331583/1‑94 (MQ=60)
CCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTT < SRR4302536.2270501/94‑1 (MQ=60)
CCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTT < SRR4302536.4984347/94‑1 (MQ=60)
CCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAAAGCCACCTCCGGCGCGATTGTTAAATACGTTT > SRR4302536.3876265/1‑94 (MQ=60)
CGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTC < SRR4302536.3673778/94‑1 (MQ=60)
CGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACACCACCTCCGGCGCGATTGTTAAATACGTTTC < SRR4302536.3801918/94‑1 (MQ=60)
GACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCC > SRR4302536.6091895/1‑94 (MQ=60)
GACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCC > SRR4302536.475183/1‑94 (MQ=60)
ACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCC > SRR4302536.2337524/1‑94 (MQ=60)
CTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCA < SRR4302536.460297/94‑1 (MQ=60)
CTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCA > SRR4302536.313557/1‑94 (MQ=60)
CTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCA > SRR4302536.2153689/1‑94 (MQ=60)
CGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGC > SRR4302536.6012041/1‑94 (MQ=60)
TCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGT < SRR4302536.1482019/94‑1 (MQ=60)
TCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGT > SRR4302536.3658458/1‑94 (MQ=60)
TCAGTTCAGCTCCTGCGTACAGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGT > SRR4302536.6743776/1‑94 (MQ=60)
CAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTG > SRR4302536.5255507/1‑94 (MQ=60)
TTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCG < SRR4302536.4026205/94‑1 (MQ=60)
CGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCCCCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGA < SRR4302536.1181081/94‑1 (MQ=60)
AGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGA > SRR4302536.1375026/1‑94 (MQ=60)
AGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGA > SRR4302536.5940894/1‑94 (MQ=60)
AGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGA < SRR4302536.3954622/94‑1 (MQ=60)
AGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGA > SRR4302536.4042271/1‑94 (MQ=60)
CTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATC < SRR4302536.5602734/94‑1 (MQ=60)
CTCCTGCGTACTGATCGAGTGCGGTAACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATC < SRR4302536.3938838/94‑1 (MQ=60)
TCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCG < SRR4302536.199488/94‑1 (MQ=60)
TCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCG < SRR4302536.2114972/94‑1 (MQ=60)
TGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCA < SRR4302536.708702/94‑1 (MQ=60)
GCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCAT < SRR4302536.6096576/94‑1 (MQ=60)
CGTACTGATCGAGTGCGGTGACAGCCTGGATTCCAACAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATC < SRR4302536.3225106/94‑1 (MQ=60)
GTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCA > SRR4302536.4180328/1‑94 (MQ=60)
GTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCA < SRR4302536.6022784/94‑1 (MQ=60)
CTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACG > SRR4302536.5370380/1‑94 (MQ=60)
TGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCTCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGC > SRR4302536.2317295/1‑94 (MQ=60)
TGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGC < SRR4302536.4051528/94‑1 (MQ=60)
ATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCG < SRR4302536.2824454/94‑1 (MQ=60)
TCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGG > SRR4302536.4238068/1‑94 (MQ=60)
TCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGG < SRR4302536.6311355/94‑1 (MQ=60)
CGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGG > SRR4302536.3314735/1‑94 (MQ=60)
CGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGG < SRR4302536.6247683/94‑1 (MQ=60)
CGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGG < SRR4302536.550399/94‑1 (MQ=60)
AGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCG < SRR4302536.2545513/94‑1 (MQ=60)
AGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCG < SRR4302536.485144/94‑1 (MQ=60)
CGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATT < SRR4302536.6771304/94‑1 (MQ=60)
CGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATT < SRR4302536.1205656/94‑1 (MQ=60)
CGGTGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATT < SRR4302536.207444/94‑1 (MQ=60)
TGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGT > SRR4302536.3115293/1‑94 (MQ=60)
TGACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGT > SRR4302536.5860783/1‑94 (MQ=60)
GACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTG < SRR4302536.6191132/94‑1 (MQ=60)
GACAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTG < SRR4302536.5453932/94‑1 (MQ=60)
GACAGCCTGGATTCCATCAACCCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTG < SRR4302536.90663/94‑1 (MQ=60)
CAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCG < SRR4302536.1930833/94‑1 (MQ=60)
CAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCG > SRR4302536.5827459/1‑94 (MQ=60)
CAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCG < SRR4302536.5504868/94‑1 (MQ=60)
CAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCG < SRR4302536.3979053/94‑1 (MQ=60)
CAGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCG < SRR4302536.3138990/94‑1 (MQ=60)
AGCCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGC > SRR4302536.2389914/1‑94 (MQ=60)
CCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTG > SRR4302536.95819/1‑94 (MQ=60)
CCTGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAAAGCCGGGCGTATTTGTGCGCTG > SRR4302536.2396206/1‑94 (MQ=60)
TGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGG < SRR4302536.5340401/94‑1 (MQ=60)
TGGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGG < SRR4302536.2229615/94‑1 (MQ=60)
GGATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGT < SRR4302536.3264801/94‑1 (MQ=60)
GATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTA < SRR4302536.4889511/94‑1 (MQ=60)
GATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTA > SRR4302536.6127559/1‑94 (MQ=60)
ATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAG > SRR4302536.4671822/1‑94 (MQ=60)
ATTCCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAG > SRR4302536.3083002/1‑94 (MQ=60)
CCATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCC > SRR4302536.2063289/1‑94 (MQ=60)
ATCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGA > SRR4302536.5783757/1‑94 (MQ=60)
ATCAACGCCACCTCCGGCGCGATTATTAAATACGTTTCCCAGTGTGCCGGGATCTGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGA > SRR4302536.2646219/1‑94 (MQ=60)
TCAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGAT > SRR4302536.2212144/1‑94 (MQ=60)
CAACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATT > SRR4302536.4962473/1‑94 (MQ=60)
AACGCCCCCTCCGGCGCGATTGTTAAATGCGTTTCCCAGCGTGCCGGAATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATAC < SRR4302536.1490987/94‑1 (MQ=60)
AACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTC < SRR4302536.4797298/94‑1 (MQ=60)
AACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTC > SRR4302536.5559007/1‑94 (MQ=60)
AACGCCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGCGCGTATTCGTGCGCTGGGTAGCCCGATTC > SRR4302536.5432322/1‑94 (MQ=60)
CCACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGG > SRR4302536.3881735/1‑94 (MQ=60)
CACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGC > SRR4302536.5211084/1‑94 (MQ=60)
CACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGCATTCGTGCGCTGGGTAGCCCGATTCGCGGT > SRR4302536.4477094/1‑94 (MQ=60)
CCCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTG < SRR4302536.2997927/94‑1 (MQ=60)
ACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTG < SRR4302536.2997686/94‑1 (MQ=60)
ACCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTG > SRR4302536.4385433/1‑94 (MQ=60)
CCTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGG > SRR4302536.5501863/1‑94 (MQ=60)
CTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGGT < SRR4302536.2424326/94‑1 (MQ=60)
CTCCGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGGG > SRR4302536.5928755/1‑94 (MQ=60)
CGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGGTGAA < SRR4302536.5884881/94‑1 (MQ=60)
CGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGGTGAA < SRR4302536.5636781/94‑1 (MQ=60)
CGGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGGTGAA < SRR4302536.3777349/94‑1 (MQ=60)
GGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGGTGAAG > SRR4302536.6062322/1‑94 (MQ=60)
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ATCATGTCCGGCGTGCGTACCCCGACTCGTCAGTTCAGCTCCTGCGTACTGATCGAGTGCGGTGACAGCCTGGATTCCATCAACGCCACCTCCAGCGCGATTGTTAAATACGTTTCCCAGCGTGCCGGGATCGGCATCAACGCCGGGCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGGTGAAG > NC_000913/2343515‑2343701
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
