Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 1475 266.7 13469680 98.2% 13227225 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,483,550 A→G intergenic (‑95/‑207) yhfA ← / → crp hypothetical protein/cyclic AMP receptor protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,483,5500AG100.0% 1060.4 / NA 323intergenic (‑95/‑207)yhfA/crphypothetical protein/cyclic AMP receptor protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (148/175);  total (148/175)

Only 100 of 328 total aligned reads displayed.

GCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACACCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCACA  >  NC_000913/3483460‑3483639
                                                                                          |                                                                                         
gCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGcc                                                                                         <  1:2915311/93‑1 (MQ=255)
 cTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCa                                                                                        >  1:3457197/1‑93 (MQ=255)
  tACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAg                                                                                       >  1:5623317/1‑93 (MQ=255)
   aCTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAgg                                                                                      >  1:5465799/1‑93 (MQ=255)
   aCTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGCCATGCTGAAGCGCGACGCCAgg                                                                                      >  1:4402939/1‑93 (MQ=255)
    cTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGga                                                                                     <  2:2891383/93‑1 (MQ=255)
    cTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGga                                                                                     <  2:3982714/93‑1 (MQ=255)
     tCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGgag                                                                                    >  2:5926269/1‑93 (MQ=255)
       cACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGac                                                                                  >  2:1568951/1‑93 (MQ=255)
           gCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACaa                                                                              >  1:6230265/1‑93 (MQ=255)
            cGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACaaa                                                                             <  1:4518714/93‑1 (MQ=255)
            cGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACaaa                                                                             >  2:2436534/1‑93 (MQ=255)
            cGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACaaa                                                                             <  1:2839660/93‑1 (MQ=255)
             gTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAg                                                                            >  2:5454101/1‑93 (MQ=255)
             gTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAg                                                                            >  2:1275791/1‑93 (MQ=255)
              tCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGc                                                                           >  2:3923756/1‑93 (MQ=255)
              tCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGc                                                                           <  2:6620296/93‑1 (MQ=255)
              tCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGc                                                                           >  2:3566004/1‑93 (MQ=255)
                aaTTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGa                                                                         >  1:4689979/1‑93 (MQ=255)
                aaTTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGa                                                                         <  1:216674/93‑1 (MQ=255)
                aaTTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGa                                                                         >  1:5758442/1‑93 (MQ=255)
                  ttttCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGaaa                                                                       <  2:2248492/93‑1 (MQ=255)
                  ttttCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGaaa                                                                       <  1:1054186/93‑1 (MQ=255)
                  ttttCCTGACAGAGTACGCGTACTAACAAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGaaa                                                                       <  1:6014653/93‑1 (MQ=255)
                     tCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCt                                                                    <  2:1357786/93‑1 (MQ=255)
                     tCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCt                                                                    <  2:1467535/93‑1 (MQ=255)
                     tCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCt                                                                    <  1:2278577/93‑1 (MQ=255)
                      ccTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTa                                                                   <  2:4203335/93‑1 (MQ=255)
                      ccTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTa                                                                   >  2:6104448/1‑93 (MQ=255)
                         gACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGc                                                                <  2:1741714/93‑1 (MQ=255)
                         gACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGc                                                                >  2:5122824/1‑93 (MQ=255)
                          aCAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCt                                                               >  2:4528119/1‑93 (MQ=255)
                           cAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTa                                                              >  2:5664214/1‑93 (MQ=255)
                             gagTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTaaa                                                            >  1:3761487/1‑93 (MQ=255)
                             gagTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTaaa                                                            >  2:6081397/1‑93 (MQ=255)
                              agTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTaaaa                                                           >  2:2541051/1‑93 (MQ=255)
                                tACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACa                                                         <  1:3010902/93‑1 (MQ=255)
                                 aCGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAg                                                        <  1:981176/93‑1 (MQ=255)
                                 aCGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAg                                                        <  1:3088336/93‑1 (MQ=255)
                                   gcgTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTc                                                      <  2:1189390/93‑1 (MQ=255)
                                   gcgTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTc                                                      <  2:3423069/93‑1 (MQ=255)
                                    cgTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCa                                                     <  2:323424/93‑1 (MQ=255)
                                      tACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAgg                                                   <  1:6448122/93‑1 (MQ=255)
                                       aCTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGa                                                  <  1:524867/93‑1 (MQ=255)
                                        cTAACCAAATCGCGCAACGGAAGGCTACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGAt                                                 <  1:3311494/93‑1 (MQ=255)
                                        cTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGAt                                                 >  2:3067503/1‑93 (MQ=255)
                                        cTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGAt                                                 <  2:1400912/93‑1 (MQ=255)
                                         tAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGGTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATg                                                <  2:6267858/93‑1 (MQ=255)
                                           aCCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCt                                              >  1:4437081/1‑93 (MQ=255)
                                           aCCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCt                                              >  1:1509280/1‑93 (MQ=255)
                                            ccAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTa                                             >  2:2660019/1‑93 (MQ=255)
                                            ccAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTa                                             <  2:5003494/93‑1 (MQ=255)
                                             cAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTAc                                            <  2:4263425/93‑1 (MQ=255)
                                              aaaTCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACa                                           >  1:2588977/1‑93 (MQ=255)
                                              aaaTCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACa                                           >  1:508444/1‑93 (MQ=255)
                                               aaTCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAg                                          <  1:386832/93‑1 (MQ=255)
                                                aTCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGt                                         >  2:4428087/1‑93 (MQ=255)
                                                aTCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGt                                         >  1:6140596/1‑93 (MQ=255)
                                                    cgcAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATa                                     <  2:808170/93‑1 (MQ=255)
                                                     gcAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATAc                                    <  2:2139057/93‑1 (MQ=255)
                                                     gcAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATAc                                    >  1:79560/1‑93 (MQ=255)
                                                       aaCGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGTATGCTACAGTAATACAt                                  <  1:2472386/93‑1 (MQ=255)
                                                       aaCGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACAt                                  <  1:6521092/93‑1 (MQ=255)
                                                       aaCGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACAt                                  >  2:5559945/1‑93 (MQ=255)
                                                        aCGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACAtt                                 >  2:2318404/1‑93 (MQ=255)
                                                        aCGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACAtt                                 <  2:6450239/93‑1 (MQ=255)
                                                        aCGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACAtt                                 <  1:374253/93‑1 (MQ=255)
                                                          ggAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGa                               >  1:6049576/1‑93 (MQ=255)
                                                           gAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGAt                              <  1:1334388/93‑1 (MQ=255)
                                                           gAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGAt                              <  1:2621583/93‑1 (MQ=255)
                                                            aaGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATg                             >  1:5019771/1‑93 (MQ=255)
                                                            aaGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATg                             >  1:3200070/1‑93 (MQ=255)
                                                             aGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGt                            >  1:1288584/1‑93 (MQ=255)
                                                             aGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGt                            >  1:2248399/1‑93 (MQ=255)
                                                               gCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTAc                          <  2:5835761/93‑1 (MQ=255)
                                                               gCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTAc                          >  2:1937878/1‑93 (MQ=255)
                                                                cGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACt                         <  1:6345906/93‑1 (MQ=255)
                                                                 gACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTg                        <  1:5840062/93‑1 (MQ=255)
                                                                   ccTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCa                      <  1:188478/93‑1 (MQ=255)
                                                                   ccTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCa                      <  1:140294/93‑1 (MQ=255)
                                                                    cTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCAt                     >  2:4855108/1‑93 (MQ=255)
                                                                           aTGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCa              >  2:203867/1‑93 (MQ=255)
                                                                            tGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCaa             >  1:3374874/1‑93 (MQ=255)
                                                                            tGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCaa             >  2:704237/1‑93 (MQ=255)
                                                                              cTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAg           <  2:1148081/93‑1 (MQ=255)
                                                                              cTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAg           <  1:4909540/93‑1 (MQ=255)
                                                                                gAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGa         <  2:5271267/93‑1 (MQ=255)
                                                                                gAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGa         <  2:4730568/93‑1 (MQ=255)
                                                                                gAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGa         <  2:3154356/93‑1 (MQ=255)
                                                                                gAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGa         >  2:108032/1‑93 (MQ=255)
                                                                                gAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGa         >  1:4030386/1‑93 (MQ=255)
                                                                                gAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGa         >  2:6663390/1‑93 (MQ=255)
                                                                                 aaGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGAc        <  2:3875118/93‑1 (MQ=255)
                                                                                 aaGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGAc        <  1:4101453/93‑1 (MQ=255)
                                                                                   gCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGt      >  2:857836/1‑93 (MQ=255)
                                                                                   gCGAGACGCAAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGCATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGGCGt      <  1:393303/93‑1 (MQ=255)
                                                                                    cGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTc     <  1:16206/93‑1 (MQ=255)
                                                                                      agaCGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTcac   <  2:411499/93‑1 (MQ=255)
                                                                                      agaCGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTcac   >  2:3371046/1‑93 (MQ=255)
                                                                                       gaCGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGAAAAGGACGTcaca  >  1:2006364/1‑93 (MQ=255)
                                                                                          |                                                                                         
GCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACACCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCACA  >  NC_000913/3483460‑3483639

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTTGCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACACCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCACATTAC  >  NC_000913/3483457‑3483643
                                                                                             |                                                                                             
TTTGCTACTCCTCTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACG                                                                                               <  SRR4302536.6644726/94‑1 (MQ=60)
TTTGCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACG                                                                                               >  SRR4302536.6502202/1‑94 (MQ=60)
TTTGCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACG                                                                                               <  SRR4302536.5232401/94‑1 (MQ=60)
 TTGCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGC                                                                                              >  SRR4302536.4665130/1‑94 (MQ=60)
 TTGCTACTCCACTGCGTCAATTTCCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGC                                                                                              <  SRR4302536.6021166/94‑1 (MQ=60)
  TGCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCC                                                                                             <  SRR4302536.4533970/94‑1 (MQ=60)
   GCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCA                                                                                            <  SRR4302536.3001362/94‑1 (MQ=60)
   GCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCA                                                                                            >  SRR4302536.3560176/1‑94 (MQ=60)
   GCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCA                                                                                            <  SRR4302536.1625693/94‑1 (MQ=60)
    CTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAG                                                                                           >  SRR4302536.5790350/1‑94 (MQ=60)
     TACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGG                                                                                          >  SRR4302536.5629140/1‑94 (MQ=60)
     TACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGCCATGCTGAAGCGCGACGCCAGG                                                                                          >  SRR4302536.4534593/1‑94 (MQ=60)
        TCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGA                                                                                       <  SRR4302536.167268/94‑1 (MQ=60)
         CCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGAC                                                                                      <  SRR4302536.6103152/94‑1 (MQ=60)
         CCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGAC                                                                                      >  SRR4302536.5505418/1‑94 (MQ=60)
         CCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGAC                                                                                      >  SRR4302536.5141228/1‑94 (MQ=60)
          CACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACA                                                                                     <  SRR4302536.1508738/94‑1 (MQ=60)
           ACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACAC                                                                                    <  SRR4302536.4561397/94‑1 (MQ=60)
           ACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACAC                                                                                    >  SRR4302536.341885/1‑94 (MQ=60)
            CTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACA                                                                                   <  SRR4302536.4431471/94‑1 (MQ=60)
            CTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACA                                                                                   <  SRR4302536.2161287/94‑1 (MQ=60)
            CTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACA                                                                                   >  SRR4302536.2303668/1‑94 (MQ=60)
             TGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAA                                                                                  >  SRR4302536.6415890/1‑94 (MQ=60)
              GCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAA                                                                                 <  SRR4302536.2421982/94‑1 (MQ=60)
              GCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAA                                                                                 <  SRR4302536.4541925/94‑1 (MQ=60)
               CGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAG                                                                                <  SRR4302536.4654233/94‑1 (MQ=60)
               CGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAG                                                                                <  SRR4302536.6003804/94‑1 (MQ=60)
               CGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAG                                                                                <  SRR4302536.2923683/94‑1 (MQ=60)
                GTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGC                                                                               >  SRR4302536.5089895/1‑94 (MQ=60)
                GTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGC                                                                               <  SRR4302536.2347614/94‑1 (MQ=60)
                 TCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCG                                                                              <  SRR4302536.3300038/94‑1 (MQ=60)
                 GCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCG                                                                              <  SRR4302536.2573789/94‑1 (MQ=60)
                  CAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGA                                                                             <  SRR4302536.2221569/94‑1 (MQ=60)
                  CAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGA                                                                             >  SRR4302536.4831003/1‑94 (MQ=60)
                  CAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGA                                                                             >  SRR4302536.5929752/1‑94 (MQ=60)
                   AATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAA                                                                            <  SRR4302536.222424/94‑1 (MQ=60)
                   AATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAA                                                                            >  SRR4302536.418531/1‑94 (MQ=60)
                   AATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAA                                                                            <  SRR4302536.1548752/94‑1 (MQ=60)
                     TTTTCCTGACAGAGTGCGCGTACTAACCAAATCGCGCAACGGAAGGCGGCCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAG                                                                          <  SRR4302536.1418857/94‑1 (MQ=60)
                     TTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAG                                                                          <  SRR4302536.1085689/94‑1 (MQ=60)
                     TTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAG                                                                          <  SRR4302536.5883722/94‑1 (MQ=60)
                     TTTTCCTGACAGAGTACGCGTACTAACAAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAG                                                                          <  SRR4302536.6193961/94‑1 (MQ=60)
                      TTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGC                                                                         <  SRR4302536.3073491/94‑1 (MQ=60)
                       TTCCTGACAGAGTACGCGTACTAACCAATGCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCT                                                                        <  SRR4302536.2574483/94‑1 (MQ=60)
                       TTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCT                                                                        <  SRR4302536.4624511/94‑1 (MQ=60)
                       TTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCT                                                                        <  SRR4302536.6324886/94‑1 (MQ=60)
                        TCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTA                                                                       <  SRR4302536.2347656/94‑1 (MQ=60)
                         CCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTAT                                                                      <  SRR4302536.5186601/94‑1 (MQ=60)
                           TGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGC                                                                    >  SRR4302536.2220077/1‑94 (MQ=60)
                            GACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCT                                                                   <  SRR4302536.2326536/94‑1 (MQ=60)
                            GACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCT                                                                   >  SRR4302536.4980748/1‑94 (MQ=60)
                            GACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCT                                                                   <  SRR4302536.335052/94‑1 (MQ=60)
                            GACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCT                                                                   <  SRR4302536.3199634/94‑1 (MQ=60)
                             ACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTA                                                                  <  SRR4302536.4036837/94‑1 (MQ=60)
                             ACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTA                                                                  <  SRR4302536.248794/94‑1 (MQ=60)
                             ACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTA                                                                  <  SRR4302536.1561352/94‑1 (MQ=60)
                               AGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTACA                                                                >  SRR4302536.2961676/1‑94 (MQ=60)
                               AGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAA                                                                <  SRR4302536.1488443/94‑1 (MQ=60)
                               AGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAA                                                                >  SRR4302536.3873829/1‑94 (MQ=60)
                               AGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAA                                                                >  SRR4302536.3856290/1‑94 (MQ=60)
                                 AGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAAC                                                              >  SRR4302536.5462779/1‑94 (MQ=60)
                                 AGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAAC                                                              >  SRR4302536.711384/1‑94 (MQ=60)
                                  GTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACA                                                             <  SRR4302536.4134783/94‑1 (MQ=60)
                                   TACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAG                                                            <  SRR4302536.3099402/94‑1 (MQ=60)
                                   TACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAG                                                            <  SRR4302536.3982673/94‑1 (MQ=60)
                                    ACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGT                                                           <  SRR4302536.1010141/94‑1 (MQ=60)
                                    ACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGT                                                           <  SRR4302536.3178646/94‑1 (MQ=60)
                                     CGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTC                                                          <  SRR4302536.776973/94‑1 (MQ=60)
                                     CGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTC                                                          >  SRR4302536.93723/1‑94 (MQ=60)
                                     CGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTC                                                          <  SRR4302536.5395588/94‑1 (MQ=60)
                                        GTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGG                                                       <  SRR4302536.2956895/94‑1 (MQ=60)
                                         TACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGA                                                      <  SRR4302536.3554038/94‑1 (MQ=60)
                                         TACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGA                                                      <  SRR4302536.6640735/94‑1 (MQ=60)
                                          ACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGAT                                                     <  SRR4302536.538303/94‑1 (MQ=60)
                                          ACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGCAT                                                     <  SRR4302536.3573097/94‑1 (MQ=60)
                                           CTAACCAAATCGCGCAACGGAAGGCTACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATG                                                    <  SRR4302536.3409331/94‑1 (MQ=60)
                                             AACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCT                                                  >  SRR4302536.4570235/1‑94 (MQ=60)
                                             AACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCT                                                  >  SRR4302536.1553752/1‑94 (MQ=60)
                                              ACCAAATCGCGCAACGGAAGGCGACCTGGGGCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTA                                                 >  SRR4302536.4695418/1‑94 (MQ=60)
                                                CAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACA                                               >  SRR4302536.521485/1‑94 (MQ=60)
                                                CAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACA                                               <  SRR4302536.324438/94‑1 (MQ=60)
                                                CAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACA                                               >  SRR4302536.2666739/1‑94 (MQ=60)
                                                CAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGAGAAAGCTATGCTAAAACAGTCAGGATGCTACA                                               >  SRR4302536.1241199/1‑94 (MQ=60)
                                                 AAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAG                                              >  SRR4302536.6296449/1‑94 (MQ=60)
                                                 AAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAG                                              >  SRR4302536.400077/1‑94 (MQ=60)
                                                  AATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGT                                             >  SRR4302536.6045984/1‑94 (MQ=60)
                                                  AATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGT                                             >  SRR4302536.6291531/1‑94 (MQ=60)
                                                  AATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGT                                             >  SRR4302536.6323586/1‑94 (MQ=60)
                                                  AATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGT                                             <  SRR4302536.397044/94‑1 (MQ=60)
                                                   ATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTA                                            >  SRR4302536.399762/1‑94 (MQ=60)
                                                   ATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTA                                            <  SRR4302536.2865831/94‑1 (MQ=60)
                                                     CGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAAT                                          >  SRR4302536.4067507/1‑94 (MQ=60)
                                                     CGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAAT                                          <  SRR4302536.2043522/94‑1 (MQ=60)
                                                      GCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATA                                         <  SRR4302536.6864050/94‑1 (MQ=60)
                                                       CGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATAC                                        >  SRR4302536.3192234/1‑94 (MQ=60)
                                                       CGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATAC                                        >  SRR4302536.5410985/1‑94 (MQ=60)
                                                       CGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATAC                                        >  SRR4302536.81696/1‑94 (MQ=60)
                                                       CGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATAC                                        >  SRR4302536.6675220/1‑94 (MQ=60)
                                                         CAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACAT                                      >  SRR4302536.1423128/1‑94 (MQ=60)
                                                         CAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACAT                                      >  SRR4302536.6426815/1‑94 (MQ=60)
                                                         CAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACAT                                      >  SRR4302536.3506181/1‑94 (MQ=60)
                                                         CAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACAT                                      >  SRR4302536.5073081/1‑94 (MQ=60)
                                                          AACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGGCACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATT                                     >  SRR4302536.132561/1‑94 (MQ=60)
                                                          AACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGTATGCTACAGTAATACATT                                     <  SRR4302536.2547027/94‑1 (MQ=60)
                                                          AACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATT                                     <  SRR4302536.6715349/94‑1 (MQ=60)
                                                           ACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTG                                    <  SRR4302536.384123/94‑1 (MQ=60)
                                                           ACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTG                                    >  SRR4302536.6676980/1‑94 (MQ=60)
                                                            CGTAAGTCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGA                                   <  SRR4302536.2292429/94‑1 (MQ=60)
                                                            CGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGA                                   >  SRR4302536.6230011/1‑94 (MQ=60)
                                                            CGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGA                                   >  SRR4302536.6333087/1‑94 (MQ=60)
                                                            CGGAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGA                                   >  SRR4302536.962478/1‑94 (MQ=60)
                                                              GAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATG                                 <  SRR4302536.6078715/94‑1 (MQ=60)
                                                              GAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATG                                 <  SRR4302536.1374212/94‑1 (MQ=60)
                                                              GAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATG                                 <  SRR4302536.2700220/94‑1 (MQ=60)
                                                              GAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATG                                 >  SRR4302536.5170244/1‑94 (MQ=60)
                                                              GAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATG                                 <  SRR4302536.5981394/94‑1 (MQ=60)
                                                              GAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATG                                 <  SRR4302536.3833471/94‑1 (MQ=60)
                                                              GAAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATG                                 >  SRR4302536.3293893/1‑94 (MQ=60)
                                                               AAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGT                                >  SRR4302536.2316456/1‑94 (MQ=60)
                                                               AAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGT                                >  SRR4302536.1327133/1‑94 (MQ=60)
                                                               AAGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGT                                >  SRR4302536.2418290/1‑94 (MQ=60)
                                                                AGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTA                               >  SRR4302536.6542368/1‑94 (MQ=60)
                                                                AGGCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTA                               >  SRR4302536.1721231/1‑94 (MQ=60)
                                                                 gggggCCTGGGTCCTGCTGAAGCGGGGCCCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGGCAGGATGCTACAGTAATtcatttatgtta                              <  SRR4302536.1802434/89‑13 (MQ=60)
                                                                  GCGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACT                             <  SRR4302536.438735/94‑1 (MQ=60)
                                                                   CGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTG                            <  SRR4302536.6534957/94‑1 (MQ=60)
                                                                   CGACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTG                            >  SRR4302536.3868850/1‑94 (MQ=60)
                                                                    GACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGC                           <  SRR4302536.6014059/94‑1 (MQ=60)
                                                                    GACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGC                           >  SRR4302536.2695299/1‑94 (MQ=60)
                                                                     ACCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCA                          >  SRR4302536.5778062/1‑94 (MQ=60)
                                                                      CCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCAT                         >  SRR4302536.2840872/1‑94 (MQ=60)
                                                                      CCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCAT                         <  SRR4302536.193449/94‑1 (MQ=60)
                                                                      CCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCAT                         <  SRR4302536.143951/94‑1 (MQ=60)
                                                                      CCTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCAT                         <  SRR4302536.3155269/94‑1 (MQ=60)
                                                                       CTGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATG                        <  SRR4302536.6361697/94‑1 (MQ=60)
                                                                        TGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGT                       >  SRR4302536.5193710/1‑94 (MQ=60)
                                                                        TGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGT                       <  SRR4302536.4714185/94‑1 (MQ=60)
                                                                        TGGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGT                       <  SRR4302536.6610437/94‑1 (MQ=60)
                                                                         GGGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTA                      <  SRR4302536.4215034/94‑1 (MQ=60)
                                                                          GGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTAT                     <  SRR4302536.3605430/94‑1 (MQ=60)
                                                                          GGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTAT                     >  SRR4302536.1193214/1‑94 (MQ=60)
                                                                          GGTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTAT                     <  SRR4302536.1943751/94‑1 (MQ=60)
                                                                           GTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATG                    >  SRR4302536.5800153/1‑94 (MQ=60)
                                                                           GTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATG                    <  SRR4302536.1345415/94‑1 (MQ=60)
                                                                           GTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATG                    <  SRR4302536.5735672/94‑1 (MQ=60)
                                                                           GTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATG                    <  SRR4302536.2993451/94‑1 (MQ=60)
                                                                           GTCATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATG                    >  SRR4302536.3123084/1‑94 (MQ=60)
                                                                             CATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCA                  >  SRR4302536.6218767/1‑94 (MQ=60)
                                                                              ATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAA                 >  SRR4302536.3475138/1‑94 (MQ=60)
                                                                              ATGCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAA                 >  SRR4302536.5263204/1‑94 (MQ=60)
                                                                                GCTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAG               <  SRR4302536.6199579/94‑1 (MQ=60)
                                                                                 CTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGG              <  SRR4302536.5010335/94‑1 (MQ=60)
                                                                                 CTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGG              <  SRR4302536.3889218/94‑1 (MQ=60)
                                                                                 CTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGG              <  SRR4302536.5057128/94‑1 (MQ=60)
                                                                                 CTGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGG              <  SRR4302536.452377/94‑1 (MQ=60)
                                                                                  TGAAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGA             >  SRR4302536.4149925/1‑94 (MQ=60)
                                                                                    AAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACG           >  SRR4302536.3409488/1‑94 (MQ=60)
                                                                                    AAGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACG           <  SRR4302536.4223127/94‑1 (MQ=60)
                                                                                     AGCGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGT          >  SRR4302536.2677567/1‑94 (MQ=60)
                                                                                      GCGAGACGCAAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGCATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGGCGTC         <  SRR4302536.403689/94‑1 (MQ=60)
                                                                                       CGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCA        <  SRR4302536.16664/94‑1 (MQ=60)
                                                                                       CGAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCA        <  SRR4302536.4634350/94‑1 (MQ=60)
                                                                                        GAGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCAC       >  SRR4302536.3013487/1‑94 (MQ=60)
                                                                                         AGACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGAAAAGGACGTCACA      >  SRR4302536.2066738/1‑94 (MQ=60)
                                                                                          GACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCACAT     <  SRR4302536.6503764/94‑1 (MQ=60)
                                                                                           ACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCACATT    <  SRR4302536.3428519/94‑1 (MQ=60)
                                                                                           ACGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCACATT    >  SRR4302536.4148198/1‑94 (MQ=60)
                                                                                            CGCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCACATTA   <  SRR4302536.2318969/94‑1 (MQ=60)
                                                                                             GCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCACATTAC  <  SRR4302536.4156761/94‑1 (MQ=60)
                                                                                             GCCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCACATTAC  >  SRR4302536.46250/1‑94 (MQ=60)
                                                                                             |                                                                                             
TTTGCTACTCCACTGCGTCAATTTTCCTGACAGAGTACGCGTACTAACCAAATCGCGCAACGGAAGGCGACCTGGGTCATGCTGAAGCGAGACACCAGGAGACACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGACGTCACATTAC  >  NC_000913/3483457‑3483643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑