Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,129,641 C→T V261V (GTG→GTA)  b2983 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,129,6410CT99.7% 1207.5 / ‑5.8 333V261V (GTG→GTA) b2983hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base T (187/145);  total (187/146)
Fisher's exact test for biased strand distribution p-value = 4.38e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01

Only 100 of 352 total aligned reads displayed.

CAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGC  >  NC_000913/3129551‑3129730
                                                                                          |                                                                                         
cAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAatac                                                                                         <  2:5622733/93‑1 (MQ=255)
cAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAatac                                                                                         >  1:2127308/1‑93 (MQ=255)
 aaaCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGTAGCGGGTCCTAACACGATCCCCACCAATACt                                                                                        >  2:4093088/1‑93 (MQ=255)
 aaaCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACt                                                                                        <  2:3556222/93‑1 (MQ=255)
  aaCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACtg                                                                                       <  2:2951848/93‑1 (MQ=255)
  aaCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACtg                                                                                       >  2:4280693/1‑93 (MQ=255)
  aaCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACtg                                                                                       <  1:2902244/93‑1 (MQ=255)
     ccGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgc                                                                                    <  1:2447394/93‑1 (MQ=255)
     ccGCTGACGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTTtgc                                                                                    >  2:9882537/1‑93 (MQ=255)
      cGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgct                                                                                   >  1:2243660/1‑93 (MQ=255)
       gCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgctg                                                                                  >  1:5599613/1‑93 (MQ=255)
       gCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgctg                                                                                  >  2:1545520/1‑93 (MQ=255)
          ggCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCAc                                                                               >  2:9301039/1‑93 (MQ=255)
            cGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGa                                                                             <  1:6468617/93‑1 (MQ=255)
             gTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAg                                                                            <  2:6641216/93‑1 (MQ=255)
              ttCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGt                                                                           >  2:7273766/1‑93 (MQ=255)
                ccGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTa                                                                         >  2:1371349/1‑93 (MQ=255)
                ccGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTa                                                                         <  2:9089509/93‑1 (MQ=255)
                 cggcggCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTAc                                                                        >  1:6738374/1‑93 (MQ=255)
                  ggcggcGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTAcg                                                                       >  1:4504568/1‑93 (MQ=255)
                  ggcggcGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTAcg                                                                       >  1:9887278/1‑93 (MQ=255)
                     ggcgTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACgcgc                                                                    >  1:6923430/1‑93 (MQ=255)
                     ggcgTCGAAGAATGTCATGGCAATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACgcgc                                                                    <  2:5480690/93‑1 (MQ=255)
                      gcgTCAAAGAATGTCATGGCGATTTTAAATACCCCGGCGGCAGCGGGTCCTAACACGACCCCCACCAATACTGTGCTGCACGAGTTACGCGcc                                                                   <  2:3677165/93‑1 (MQ=255)
                        gTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGa                                                                 <  1:3753048/93‑1 (MQ=255)
                         tCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAc                                                                <  1:4621161/93‑1 (MQ=255)
                         tCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAc                                                                >  2:7098340/1‑93 (MQ=255)
                           gaagaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCa                                                              >  1:9525583/1‑93 (MQ=255)
                           gaagaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCa                                                              >  1:7756280/1‑93 (MQ=255)
                           gaagaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCa                                                              >  1:3105085/1‑93 (MQ=255)
                             agaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGa                                                            >  1:3007114/1‑93 (MQ=255)
                             agaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGa                                                            >  2:4926012/1‑93 (MQ=255)
                               aaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATg                                                          >  2:3343941/1‑93 (MQ=255)
                                aTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATgg                                                         <  1:2727937/93‑1 (MQ=255)
                                 tGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGa                                                        <  1:7159554/93‑1 (MQ=255)
                                 tGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTACACGAGTTATGCGACGACCAGATGGa                                                        >  1:4796528/1‑93 (MQ=255)
                                  gTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAg                                                       <  1:9036775/93‑1 (MQ=255)
                                  gTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAg                                                       >  1:7404936/1‑93 (MQ=255)
                                  gTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAg                                                       >  1:7274342/1‑93 (MQ=255)
                                  gTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAg                                                       <  1:3996911/93‑1 (MQ=255)
                                   tCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGt                                                      <  2:2823944/93‑1 (MQ=255)
                                   tCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGt                                                      <  1:8592841/93‑1 (MQ=255)
                                   tCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGt                                                      <  1:9433816/93‑1 (MQ=255)
                                    cATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTg                                                     >  2:4640195/1‑93 (MQ=255)
                                      tGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTggg                                                   >  2:7392788/1‑93 (MQ=255)
                                      tGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTggg                                                   >  1:1406170/1‑93 (MQ=255)
                                       ggagATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGc                                                  <  1:6020507/90‑1 (MQ=255)
                                          gATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAAt                                               >  1:5511880/1‑93 (MQ=255)
                                           aTTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATg                                              >  2:4813584/1‑93 (MQ=255)
                                                aaaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggt                                         <  2:7512270/93‑1 (MQ=255)
                                                aaaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCCGCACGAGTTACGCGACGACCAGATGGAGTGGGCAATgttggt                                         >  1:8475395/1‑93 (MQ=255)
                                                 aaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggtt                                        >  2:3431750/1‑93 (MQ=255)
                                                 aaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggtt                                        >  1:6232296/1‑93 (MQ=255)
                                                 aaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGCGGGCAATgttggtt                                        >  2:5324148/1‑93 (MQ=255)
                                                  aTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggttg                                       <  2:789136/93‑1 (MQ=255)
                                                  aTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggttg                                       >  2:3698576/1‑93 (MQ=255)
                                                    aaCCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGAc                                     <  2:248985/93‑1 (MQ=255)
                                                     aCCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGAcc                                    <  1:4086082/93‑1 (MQ=255)
                                                      cccGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACGGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCa                                   <  1:1814512/93‑1 (MQ=255)
                                                        cggcggCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGa                                 >  2:2626422/1‑93 (MQ=255)
                                                         ggcggcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGAc                                >  1:7565251/1‑93 (MQ=255)
                                                         ggcggcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGAc                                <  2:2395177/93‑1 (MQ=255)
                                                           gggcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAGTGTTGGTTGACCAGACaa                              <  1:9283801/92‑1 (MQ=255)
                                                             gcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaac                            >  1:8881733/1‑92 (MQ=255)
                                                             gcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaaa                            >  1:7912172/1‑93 (MQ=255)
                                                             gcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaaa                            <  1:1348811/93‑1 (MQ=255)
                                                              cAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAAc                           <  2:9003562/93‑1 (MQ=255)
                                                               aGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACt                          >  1:3806005/1‑93 (MQ=255)
                                                                gCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTc                         >  2:1769322/1‑93 (MQ=255)
                                                                gCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTc                         >  2:6329529/1‑93 (MQ=255)
                                                                  gggTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCa                       <  1:1976125/93‑1 (MQ=255)
                                                                   ggcccTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAc                      <  2:1863093/90‑1 (MQ=255)
                                                                   ggTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAc                      >  2:3896833/1‑93 (MQ=255)
                                                                   ggTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAc                      >  1:3399012/1‑93 (MQ=255)
                                                                    gTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAcg                     >  1:1078750/1‑93 (MQ=255)
                                                                    gTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAcg                     <  1:6995746/93‑1 (MQ=255)
                                                                     tCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAcgc                    >  1:655062/1‑93 (MQ=255)
                                                                       cTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACgcgc                  <  2:6989226/93‑1 (MQ=255)
                                                                        tAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGcc                 >  2:1169375/1‑93 (MQ=255)
                                                                         aaCACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCt                <  2:8288831/93‑1 (MQ=255)
                                                                         aaCACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCt                <  2:10035801/93‑1 (MQ=255)
                                                                          acacGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCtt               >  2:8444269/1‑93 (MQ=255)
                                                                          acacGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCtt               >  2:6970073/1‑93 (MQ=255)
                                                                           cacGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCttt              <  1:8171720/93‑1 (MQ=255)
                                                                              gATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAAt           <  2:8049130/93‑1 (MQ=255)
                                                                                tCCCCACCAATACTGTGCGTCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGt         <  1:6150597/93‑1 (MQ=255)
                                                                                 ccccACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTa        <  1:2360734/93‑1 (MQ=255)
                                                                                 ccccACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTa        <  2:9515946/93‑1 (MQ=255)
                                                                                 ccccACCAATACTGTGCTGCACGAGTTACGAGCCGACCAGATGGAGTGGGAAATGTTGGTTGACCAGACAAATCTCCACGCGCCTTTAATGTa        <  1:4314530/93‑1 (MQ=255)
                                                                                  cccACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTAt       >  2:5932611/1‑93 (MQ=255)
                                                                                  cccACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTAt       <  2:783876/93‑1 (MQ=255)
                                                                                   ccaccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATc      >  1:1001232/1‑93 (MQ=255)
                                                                                   ccaccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATc      <  1:5767051/93‑1 (MQ=255)
                                                                                   ccaccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATc      <  1:9784314/93‑1 (MQ=255)
                                                                                     cccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCgg    <  2:2203852/92‑1 (MQ=255)
                                                                                     accaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCgg    >  2:81043/1‑93 (MQ=255)
                                                                                     accaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGAATCgg    >  2:3917765/1‑93 (MQ=255)
                                                                                      ccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCggg   >  1:813496/1‑93 (MQ=255)
                                                                                       caATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGc  <  1:505849/93‑1 (MQ=255)
                                                                                       caATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGc  >  2:2013511/1‑93 (MQ=255)
                                                                                          |                                                                                         
CAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGC  >  NC_000913/3129551‑3129730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCAGAC  >  NC_000913/3129548‑3129734
                                                                                             |                                                                                             
CAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAAT                                                                                               >  SRR4302540.6154059/1‑94 (MQ=60)
CAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAAT                                                                                               >  SRR4302540.9616905/1‑94 (MQ=60)
CAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAAT                                                                                               >  SRR4302540.4371330/1‑94 (MQ=60)
 AGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATA                                                                                              <  SRR4302540.5128650/94‑1 (MQ=60)
  GCAAACCCGCTGGGGTTCCGGCGGCGTCGAAGAATGGCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATAC                                                                                             <  SRR4302540.1710960/94‑1 (MQ=60)
  GCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATAC                                                                                             <  SRR4302540.1710646/94‑1 (MQ=60)
  GCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATAC                                                                                             <  SRR4302540.3276225/94‑1 (MQ=60)
  GCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATAC                                                                                             >  SRR4302540.2150135/1‑94 (MQ=60)
   CAAACCCGCTGGCGTTCGGGCGGCGTCGAAGAATGTCATGGCGATTTGAAATAACCCGGCGGCACCGGGTCCTAACACGATCCCCACCAATACT                                                                                            <  SRR4302540.7123143/94‑1 (MQ=60)
   CAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACT                                                                                            <  SRR4302540.6278513/94‑1 (MQ=60)
    AAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTG                                                                                           >  SRR4302540.3990858/1‑94 (MQ=60)
     AACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGT                                                                                          <  SRR4302540.2933920/94‑1 (MQ=60)
       CCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGC                                                                                        >  SRR4302540.3844668/1‑94 (MQ=60)
       CCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGC                                                                                        >  SRR4302540.2285574/1‑94 (MQ=60)
        CCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTGCTAACACGATCCCCACCCATACTGTGCT                                                                                       >  SRR4302540.79286/1‑94 (MQ=60)
        CCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCT                                                                                       >  SRR4302540.2267774/1‑94 (MQ=60)
        CCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCT                                                                                       <  SRR4302540.2473747/94‑1 (MQ=60)
        CCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCT                                                                                       >  SRR4302540.1040933/1‑94 (MQ=60)
         CGCTGGCGTTCCGGCGGCGTCGAAGCATGTCATGGCGATTTTAAATAACCCCGCGGCCGCGGGTCCTAACACGATACCCCCCAATACTGTGCTG                                                                                      >  SRR4302540.4392777/1‑94 (MQ=60)
         CGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTG                                                                                      >  SRR4302540.5661220/1‑94 (MQ=60)
         CGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTG                                                                                      <  SRR4302540.2959964/94‑1 (MQ=60)
         CGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTG                                                                                      >  SRR4302540.4392775/1‑94 (MQ=60)
          GCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGC                                                                                     >  SRR4302540.4306209/1‑94 (MQ=60)
           CTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCA                                                                                    <  SRR4302540.8688094/94‑1 (MQ=60)
            TGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCAC                                                                                   >  SRR4302540.9992089/1‑94 (MQ=60)
            TGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCAC                                                                                   >  SRR4302540.5725251/1‑94 (MQ=60)
             GGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACG                                                                                  >  SRR4302540.645234/1‑94 (MQ=60)
             GGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGGCCTAAAACGATCCCCACCACTACTGTGCTGCACG                                                                                  >  SRR4302540.8815376/1‑94 (MQ=60)
               CGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAG                                                                                <  SRR4302540.6540593/94‑1 (MQ=60)
                GTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGT                                                                               >  SRR4302540.377081/1‑94 (MQ=60)
                 TTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTT                                                                              >  SRR4302540.1379711/1‑94 (MQ=60)
                  TCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATACCCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTA                                                                             <  SRR4302540.714925/94‑1 (MQ=60)
                  TCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTA                                                                             >  SRR4302540.3414101/1‑94 (MQ=60)
                   CCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTAC                                                                            >  SRR4302540.6812812/1‑94 (MQ=60)
                   CCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTAC                                                                            <  SRR4302540.7846424/94‑1 (MQ=60)
                   CCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTAC                                                                            <  SRR4302540.6670215/94‑1 (MQ=60)
                    CGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACG                                                                           >  SRR4302540.4553395/1‑94 (MQ=60)
                    CGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACG                                                                           >  SRR4302540.10002728/1‑94 (MQ=60)
                    CGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACG                                                                           >  SRR4302540.1532849/1‑94 (MQ=60)
                     GGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGC                                                                          >  SRR4302540.2503123/1‑94 (MQ=60)
                     GGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGC                                                                          >  SRR4302540.7444925/1‑94 (MQ=60)
                       CGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGC                                                                        >  SRR4302540.1666236/1‑94 (MQ=60)
                       CGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGC                                                                        >  SRR4302540.7000477/1‑94 (MQ=60)
                        GGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAAAACGATCCCCACCAATACTGTGCTGAACGAGTTACGCGCA                                                                       >  SRR4302540.3088012/1‑94 (MQ=60)
                         GCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCG                                                                      <  SRR4302540.6555071/94‑1 (MQ=60)
                          CGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGC                                                                     >  SRR4302540.599930/1‑94 (MQ=60)
                          CGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGA                                                                     >  SRR4302540.7332666/1‑94 (MQ=60)
                          CGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGA                                                                     >  SRR4302540.9583414/1‑94 (MQ=60)
                          CGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCACCCACTACTGTGCTCCCCGAGTTACGCGCCGA                                                                     >  SRR4302540.1398877/1‑94 (MQ=60)
                           GTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAC                                                                    >  SRR4302540.7711940/1‑94 (MQ=60)
                           GTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAC                                                                    <  SRR4302540.2721839/94‑1 (MQ=60)
                           GTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAC                                                                    <  SRR4302540.3793993/94‑1 (MQ=60)
                           GTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGATGCACGAGTTACGCGCCGAC                                                                    >  SRR4302540.7711941/1‑94 (MQ=60)
                            TCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACC                                                                   <  SRR4302540.4670696/94‑1 (MQ=60)
                             CGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCA                                                                  >  SRR4302540.3139078/1‑94 (MQ=60)
                             CGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCA                                                                  >  SRR4302540.3164075/1‑94 (MQ=60)
                             CGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCA                                                                  <  SRR4302540.8502138/94‑1 (MQ=60)
                             CGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCA                                                                  >  SRR4302540.7846892/1‑94 (MQ=60)
                             CGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCA                                                                  >  SRR4302540.9638369/1‑94 (MQ=60)
                              GAAGAATGTCATGGCGATTTTAAATAACCCCGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAG                                                                 >  SRR4302540.8131425/1‑94 (MQ=60)
                               AAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGA                                                                >  SRR4302540.3040214/1‑94 (MQ=60)
                               AAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGA                                                                >  SRR4302540.9846606/1‑94 (MQ=60)
                                AGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGAT                                                               <  SRR4302540.2091553/94‑1 (MQ=60)
                                AGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGAT                                                               >  SRR4302540.5624063/1‑94 (MQ=60)
                                 GAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATG                                                              >  SRR4302540.1971863/1‑94 (MQ=60)
                                  AATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGG                                                             >  SRR4302540.1214903/1‑94 (MQ=60)
                                  AATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGG                                                             <  SRR4302540.225222/94‑1 (MQ=60)
                                   ATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGA                                                            <  SRR4302540.2757358/94‑1 (MQ=60)
                                   ATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGA                                                            >  SRR4302540.6928169/1‑94 (MQ=60)
                                   ATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTACACGAGTTATGCGACGACCAGATGGA                                                            >  SRR4302540.4847858/1‑94 (MQ=60)
                                   ATGTCATGGCGATTTTAAATAACCCAGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGGTACGCGCCGACCAGATGGG                                                            >  SRR4302540.4588667/1‑94 (MQ=60)
                                    TGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAG                                                           >  SRR4302540.1963776/1‑94 (MQ=60)
                                    TGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAG                                                           >  SRR4302540.7487436/1‑94 (MQ=60)
                                    TGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAG                                                           <  SRR4302540.7239358/94‑1 (MQ=60)
                                    TGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAG                                                           >  SRR4302540.7355513/1‑94 (MQ=60)
                                     GTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCGGATGGAGT                                                          <  SRR4302540.9551933/94‑1 (MQ=60)
                                     GTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGT                                                          <  SRR4302540.9145232/94‑1 (MQ=60)
                                     GTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGT                                                          <  SRR4302540.9552439/94‑1 (MQ=60)
                                     GTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGT                                                          <  SRR4302540.4039926/94‑1 (MQ=60)
                                     GTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGT                                                          >  SRR4302540.4103387/1‑94 (MQ=60)
                                     GTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGG                                                          >  SRR4302540.9689504/1‑94 (MQ=60)
                                     GTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGG                                                          >  SRR4302540.7516252/1‑94 (MQ=60)
                                     GTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGG                                                          >  SRR4302540.826044/1‑94 (MQ=60)
                                      TCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTG                                                         >  SRR4302540.6834389/1‑94 (MQ=60)
                                      TCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTG                                                         <  SRR4302540.9545864/94‑1 (MQ=60)
                                      TCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTG                                                         <  SRR4302540.8692730/94‑1 (MQ=60)
                                      TCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTG                                                         <  SRR4302540.10053071/94‑1 (MQ=60)
                                       CATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGG                                                        <  SRR4302540.9054699/94‑1 (MQ=60)
                                       CATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGGGG                                                        >  SRR4302540.8818216/1‑94 (MQ=60)
                                        ATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGG                                                       >  SRR4302540.2449736/1‑94 (MQ=60)
                                        ATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGG                                                       >  SRR4302540.1421314/1‑94 (MQ=60)
                                         TGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGC                                                      <  SRR4302540.4593654/94‑1 (MQ=60)
                                          GGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCA                                                     <  SRR4302540.5742011/94‑1 (MQ=60)
                                          GGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCA                                                     <  SRR4302540.5274069/94‑1 (MQ=60)
                                          GGAGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCA                                                     <  SRR4302540.6087282/94‑1 (MQ=60)
                                           GCTATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAA                                                    <  SRR4302540.4858628/94‑1 (MQ=60)
                                            CGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAAT                                                   >  SRR4302540.5572585/1‑94 (MQ=60)
                                            CGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAAT                                                   >  SRR4302540.8149677/1‑94 (MQ=60)
                                              ATTTTAAATAACCCGGCGTCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGT                                                 <  SRR4302540.284585/94‑1 (MQ=60)
                                              ATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGT                                                 <  SRR4302540.608403/94‑1 (MQ=60)
                                              ATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGT                                                 >  SRR4302540.1325389/1‑94 (MQ=60)
                                               TTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTT                                                >  SRR4302540.2430071/1‑94 (MQ=60)
                                               TTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTT                                                <  SRR4302540.4245492/94‑1 (MQ=60)
                                                  TAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGT                                             >  SRR4302540.7005449/1‑94 (MQ=60)
                                                  TAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCCGCACGAGTTACGCGACGACCAGATGGAGTGGGCAATGTTGGT                                             >  SRR4302540.8573829/1‑94 (MQ=60)
                                                   AAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTT                                            <  SRR4302540.6703400/94‑1 (MQ=60)
                                                   AAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTT                                            >  SRR4302540.6301611/1‑94 (MQ=60)
                                                    AATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTG                                           <  SRR4302540.8011956/94‑1 (MQ=60)
                                                     ATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGA                                          >  SRR4302540.2754474/1‑94 (MQ=60)
                                                      TAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGAC                                         <  SRR4302540.5708089/94‑1 (MQ=60)
                                                      TAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGAC                                         >  SRR4302540.5921047/1‑94 (MQ=60)
                                                       AACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACC                                        >  SRR4302540.8730014/1‑94 (MQ=60)
                                                       AACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACC                                        <  SRR4302540.8892334/94‑1 (MQ=60)
                                                       AACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACC                                        <  SRR4302540.4968437/94‑1 (MQ=60)
                                                        ACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCA                                       <  SRR4302540.4130149/94‑1 (MQ=60)
                                                         CCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAG                                      >  SRR4302540.2059181/1‑94 (MQ=60)
                                                         CCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAG                                      >  SRR4302540.9310742/1‑94 (MQ=60)
                                                         CCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACGGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAG                                      <  SRR4302540.1834324/94‑1 (MQ=60)
                                                           CGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGAC                                    >  SRR4302540.7650106/1‑94 (MQ=60)
                                                            GGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGCTGACCAGACA                                   >  SRR4302540.10081884/1‑94 (MQ=60)
                                                              GGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAGTGTTGGTTGACCAGACAAA                                 <  SRR4302540.9394754/94‑1 (MQ=60)
                                                              CGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAA                                 <  SRR4302540.2904270/94‑1 (MQ=60)
                                                               GGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAC                                >  SRR4302540.8984523/1‑94 (MQ=60)
                                                               GGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAA                                >  SRR4302540.6929677/1‑94 (MQ=60)
                                                               GGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAA                                >  SRR4302540.3144483/1‑94 (MQ=60)
                                                               GGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAA                                >  SRR4302540.8004424/1‑94 (MQ=60)
                                                                GCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAAC                               <  SRR4302540.2079681/94‑1 (MQ=60)
                                                                GCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAAC                               <  SRR4302540.1362983/94‑1 (MQ=60)
                                                                GCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAAC                               >  SRR4302540.2973403/1‑94 (MQ=60)
                                                                 CAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACT                              >  SRR4302540.3847460/1‑94 (MQ=60)
                                                                 CAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACT                              <  SRR4302540.6178056/94‑1 (MQ=60)
                                                                 CAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACT                              <  SRR4302540.7024872/94‑1 (MQ=60)
                                                                  AGCGGGTCCTAACACGATCCCCACTAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTC                             >  SRR4302540.8265835/1‑94 (MQ=60)
                                                                  AGCGGGTCCTAACACGATCCCCACTAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGGTGACCAGACAAAACTC                             >  SRR4302540.8265836/1‑94 (MQ=60)
                                                                   GCGGTTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCC                            <  SRR4302540.4040490/94‑1 (MQ=60)
                                                                     GGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAC                          <  SRR4302540.6288790/94‑1 (MQ=60)
                                                                     GGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAC                          >  SRR4302540.5611734/1‑94 (MQ=60)
                                                                     GGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAC                          >  SRR4302540.3436071/1‑94 (MQ=60)
                                                                     GGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAC                          <  SRR4302540.1997564/94‑1 (MQ=60)
                                                                     GGGGCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAC                          <  SRR4302540.369121/94‑1 (MQ=60)
                                                                      GGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACG                         >  SRR4302540.5574516/1‑94 (MQ=60)
                                                                      GGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACG                         >  SRR4302540.1089778/1‑94 (MQ=60)
                                                                       GTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGC                        <  SRR4302540.7073388/94‑1 (MQ=60)
                                                                       GTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGC                        >  SRR4302540.662043/1‑94 (MQ=60)
                                                                         CCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGCCAAAACTCCACGCGC                      >  SRR4302540.61165/1‑94 (MQ=60)
                                                                          CTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCC                     >  SRR4302540.7091946/1‑94 (MQ=60)
                                                                          CTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCC                     >  SRR4302540.9282180/1‑94 (MQ=60)
                                                                          CTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCC                     >  SRR4302540.6579126/1‑94 (MQ=60)
                                                                           TAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCT                    <  SRR4302540.2342422/94‑1 (MQ=60)
                                                                            AACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTT                   <  SRR4302540.4734481/94‑1 (MQ=60)
                                                                            AACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTT                   >  SRR4302540.4815889/1‑94 (MQ=60)
                                                                             ACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTT                  <  SRR4302540.9715115/94‑1 (MQ=60)
                                                                              CACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTA                 >  SRR4302540.8667329/1‑94 (MQ=60)
                                                                              CACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTA                 <  SRR4302540.8266632/94‑1 (MQ=60)
                                                                               ACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAA                >  SRR4302540.3830561/1‑94 (MQ=60)
                                                                               ACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAA                >  SRR4302540.9341611/1‑94 (MQ=60)
                                                                                CGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAAT               <  SRR4302540.4119704/94‑1 (MQ=60)
                                                                                CGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAAT               >  SRR4302540.10001346/1‑94 (MQ=60)
                                                                                CGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAAT               <  SRR4302540.5330746/94‑1 (MQ=60)
                                                                                 gcaaCCCACCAATACTGTGCTGCACGAGTTACGCGCCTACCAGATGGAGTGGGCAATGTTGGTTGACCAGACGAAACTCCACGCGCCTTTAATG              <  SRR4302540.6348235/90‑1 (MQ=60)
                                                                                  ATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGT             >  SRR4302540.3071470/1‑94 (MQ=60)
                                                                                  ATCCCCACCAATACTGTGCTGCACGAGTTACGCCCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGT             <  SRR4302540.7267908/94‑1 (MQ=60)
                                                                                   TCCCCACCAATCCTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTA            <  SRR4302540.1630073/94‑1 (MQ=60)
                                                                                   TCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTA            <  SRR4302540.4599102/94‑1 (MQ=60)
                                                                                   TCCCCACCAATACTGTGCGTCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTA            <  SRR4302540.6219097/94‑1 (MQ=60)
                                                                                    CCCCGCCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGTTTTACCAGACAAGACTCCACGCGCCTTTAATGTAT           <  SRR4302540.629628/94‑1 (MQ=60)
                                                                                    CCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTAT           <  SRR4302540.2386166/94‑1 (MQ=60)
                                                                                    CCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTAT           <  SRR4302540.2363862/94‑1 (MQ=60)
                                                                                    CCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTAT           <  SRR4302540.4459468/94‑1 (MQ=60)
                                                                                    CCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTAT           <  SRR4302540.7606423/94‑1 (MQ=60)
                                                                                    CCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTAT           >  SRR4302540.220403/1‑94 (MQ=60)
                                                                                    CCCCACCAATACTGTGCTGCACGAGTTACGAGCCGACCAGATGGAGTGGGAAATGTTGGTTGACCAGACAAATCTCCACGCGCCTTTAATGTAT           <  SRR4302540.4361504/94‑1 (MQ=60)
                                                                                     CCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCATACAAAACTCCACGCGCCTTTAATGTATC          <  SRR4302540.3954613/94‑1 (MQ=60)
                                                                                     CCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATC          <  SRR4302540.3846327/94‑1 (MQ=60)
                                                                                     CCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATC          >  SRR4302540.1011404/1‑94 (MQ=60)
                                                                                      CCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCG         <  SRR4302540.7391301/94‑1 (MQ=60)
                                                                                      CCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCG         <  SRR4302540.9103278/94‑1 (MQ=60)
                                                                                      CCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCG         <  SRR4302540.9898966/94‑1 (MQ=60)
                                                                                      CCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCG         <  SRR4302540.5830732/94‑1 (MQ=60)
                                                                                      CCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCG         >  SRR4302540.1053520/1‑94 (MQ=60)
                                                                                       CACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGG        >  SRR4302540.8454522/1‑94 (MQ=60)
                                                                                       CACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGG        <  SRR4302540.1156514/94‑1 (MQ=60)
                                                                                        ACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGG       >  SRR4302540.7479255/1‑94 (MQ=60)
                                                                                        ACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGG       >  SRR4302540.6555124/1‑94 (MQ=60)
                                                                                        ACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGG       >  SRR4302540.822135/1‑94 (MQ=60)
                                                                                        ACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGG       >  SRR4302540.4758819/1‑94 (MQ=60)
                                                                                         CCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGC      <  SRR4302540.3027922/94‑1 (MQ=60)
                                                                                          CAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCA     >  SRR4302540.5065836/1‑94 (MQ=60)
                                                                                          CAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCA     <  SRR4302540.9408578/94‑1 (MQ=60)
                                                                                          CAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCA     <  SRR4302540.9435541/94‑1 (MQ=60)
                                                                                          CAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCA     <  SRR4302540.511265/94‑1 (MQ=60)
                                                                                          CAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCA     <  SRR4302540.5362434/94‑1 (MQ=60)
                                                                                            ATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCAGA   >  SRR4302540.1216922/1‑94 (MQ=60)
                                                                                            ATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCAGA   <  SRR4302540.3532519/94‑1 (MQ=60)
                                                                                             TACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCAGAC  <  SRR4302540.1801056/94‑1 (MQ=60)
                                                                                             TACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCAGAC  <  SRR4302540.1801055/94‑1 (MQ=60)
                                                                                             |                                                                                             
CAGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCAGAC  >  NC_000913/3129548‑3129734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑