Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,129,641 |
C→T |
V261V (GTG→GTA) |
b2983 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,129,641 | 0 | C | T | 100.0%
| 762.2
/ NA
| 208 | V261V (GTG→GTA) | b2983 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (101/107); total (101/107) |
Only 100 of 220 total aligned reads displayed.
CAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGC > NC_000913/3129551‑3129730
|
aCCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACtgt < 2:635210/93‑1 (MQ=255)
ccGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgc < 1:3779640/93‑1 (MQ=255)
ccGCGGGCTTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGCCCTAACACGATCCCCACCAATACTGtgc < 1:4318336/93‑1 (MQ=255)
cGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgct > 1:5706102/1‑93 (MQ=255)
cGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgct > 2:5622969/1‑93 (MQ=255)
gCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgctg > 1:3668126/1‑93 (MQ=255)
gCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgctg > 2:512037/1‑93 (MQ=255)
tGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGtgctgta > 1:5973838/1‑91 (MQ=255)
tGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCa > 1:1027126/1‑93 (MQ=255)
tGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCa < 2:886896/93‑1 (MQ=255)
gCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCCCCCATACTGTGCTGCACg > 1:1300267/1‑93 (MQ=255)
cGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGa < 1:1375734/93‑1 (MQ=255)
cGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCACCCAATACTGTGCTGCACgg > 1:3652156/1‑92 (MQ=255)
gTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAg > 1:5639620/1‑93 (MQ=255)
ttCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGt > 1:4758697/1‑93 (MQ=255)
ttCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGt > 2:5540959/1‑93 (MQ=255)
cggcggCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTAc < 1:5284563/93‑1 (MQ=255)
ggcgTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACgcgc < 2:6151783/93‑1 (MQ=255)
gcgTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGcc < 1:4667678/93‑1 (MQ=255)
gcgTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGcc > 1:495801/1‑93 (MQ=255)
cgTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCg > 1:4085449/1‑93 (MQ=255)
gTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGa > 2:2344863/1‑93 (MQ=255)
tCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAc > 2:3026902/1‑93 (MQ=255)
tCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAc > 2:1822526/1‑93 (MQ=255)
tCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAc > 2:785285/1‑93 (MQ=255)
cGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGAcc < 2:3896977/93‑1 (MQ=255)
gaagaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCa > 1:6116525/1‑93 (MQ=255)
gaagaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCa > 1:445772/1‑93 (MQ=255)
aagaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAg < 2:74172/93‑1 (MQ=255)
agaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGa < 2:3613105/93‑1 (MQ=255)
gaaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGAt > 2:4061928/1‑93 (MQ=255)
aaTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATg > 1:3469086/1‑93 (MQ=255)
aTGTGATGGCCATTTCAAATACCCGGGCGGCACCGGGTCCTACCCCGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGAttg < 2:4344866/93‑3 (MQ=255)
aTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATgg < 2:3589140/93‑1 (MQ=255)
aTGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATgg < 2:29095/93‑1 (MQ=255)
tGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGa > 1:3060878/1‑93 (MQ=255)
gTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAg > 2:5498446/1‑93 (MQ=255)
gTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGATACGCGCCGACCAGATGGAg > 1:2807571/1‑93 (MQ=255)
tCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGACCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGCCCAGATGGAGt < 2:4967712/93‑1 (MQ=255)
cATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTg < 1:1870066/93‑1 (MQ=255)
aTGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTgg > 1:1806778/1‑93 (MQ=255)
tGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTggg < 1:1601877/93‑1 (MQ=255)
ggCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGc < 1:978217/93‑1 (MQ=255)
cGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCaa > 1:2398356/1‑93 (MQ=255)
aTTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATg > 1:60217/1‑93 (MQ=255)
aTTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATg > 2:2483768/1‑93 (MQ=255)
ttttAAATAACCCGGCGGCAGCGGGTCCTAACGCGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgt < 1:381591/93‑1 (MQ=255)
ttttAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgt > 2:3319232/1‑93 (MQ=255)
tttAAATAACCCGGCGGCAGCGGGTCCTAACATGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgtt < 2:2172894/93‑1 (MQ=255)
tttAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCNNCCAGATGGAGTGGNNAATntt > 1:5814434/1‑93 (MQ=255)
tttAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgtt < 2:5479245/93‑1 (MQ=255)
tAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttgg < 2:1599747/93‑1 (MQ=255)
aaaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggt < 1:4196985/93‑1 (MQ=255)
aaaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggt < 2:278753/93‑1 (MQ=255)
aaaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggt < 1:2788288/93‑1 (MQ=255)
aaaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggt < 1:4646444/93‑1 (MQ=255)
aaaTAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATgttggt < 1:932751/93‑1 (MQ=255)
aCCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGAcc > 2:3792854/1‑93 (MQ=255)
aCCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGAcc < 1:5874716/93‑1 (MQ=255)
cccGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCa > 2:2041351/1‑93 (MQ=255)
ccGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAg > 2:3061319/1‑93 (MQ=255)
ggcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaa > 2:2730924/1‑93 (MQ=255)
ggcAGCGGGCCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaa < 2:4732283/93‑1 (MQ=255)
gcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaaa > 1:5472176/1‑93 (MQ=255)
gcAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACaaaa > 2:3108545/1‑93 (MQ=255)
aGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGGGGGCAATGGTGGTTGACCAGACAAAACt > 1:2881138/1‑93 (MQ=255)
gCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCTCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTc > 1:3328037/1‑93 (MQ=255)
gCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTc > 2:1093204/1‑93 (MQ=255)
gCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTc > 1:870910/1‑93 (MQ=255)
cGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTcc < 2:4631343/93‑1 (MQ=255)
cGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTcc < 1:3644794/93‑1 (MQ=255)
cGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTcc > 2:4161164/1‑93 (MQ=255)
tCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAcgc > 2:122698/1‑93 (MQ=255)
tCCTAACACGATCCCCACCAATACTGTGCTGCACGAGGTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAcgc > 2:3189575/1‑93 (MQ=255)
tAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGcc < 1:3220082/93‑1 (MQ=255)
tAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGcc > 1:504694/1‑93 (MQ=255)
aaCACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCt > 1:2293704/1‑93 (MQ=255)
acacGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCtt < 2:3007297/93‑1 (MQ=255)
acacGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCtt < 2:5971308/93‑1 (MQ=255)
acGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTa > 1:1158861/1‑93 (MQ=255)
acGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTa < 2:295944/93‑1 (MQ=255)
cGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTaa < 2:2598066/93‑1 (MQ=255)
gATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAAt > 1:1257977/1‑93 (MQ=255)
gATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAAt > 2:3144360/1‑93 (MQ=255)
gATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAAt < 1:6245665/93‑1 (MQ=255)
aTCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATg < 1:2499213/93‑1 (MQ=255)
aTCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATg > 1:300153/1‑93 (MQ=255)
aTCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACACGCCTTTAATg > 2:1916934/1‑93 (MQ=255)
tCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGt > 2:5207870/1‑93 (MQ=255)
tCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGt < 1:2112218/93‑1 (MQ=255)
tCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGt < 2:3734631/93‑1 (MQ=255)
cccACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTAt > 2:445864/1‑93 (MQ=255)
cccACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTAt < 2:1054830/93‑1 (MQ=255)
ccaccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATc > 2:1483695/1‑93 (MQ=255)
ccaccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATc > 1:740073/1‑93 (MQ=255)
caccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCg < 2:3668386/93‑1 (MQ=255)
cccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCgg < 1:515907/92‑1 (MQ=255)
accaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCgg > 1:3881387/1‑93 (MQ=255)
ccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCggg < 2:5353920/93‑1 (MQ=255)
ccaATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCggg > 2:5312088/1‑93 (MQ=255)
|
CAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGC > NC_000913/3129551‑3129730
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCAGA > NC_000913/3129549‑3129733
|
AGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATA > SRR4302533.808927/1‑94 (MQ=60)
CCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCT < SRR4302533.3007792/94‑1 (MQ=60)
CCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCT > SRR4302533.5740567/1‑94 (MQ=60)
CCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCT < SRR4302533.3802793/94‑1 (MQ=60)
CCGCGGGCTTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGCCCTAACACGATCCCCACCAATACTGTGCT < SRR4302533.4344344/94‑1 (MQ=60)
CGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTG < SRR4302533.5279995/94‑1 (MQ=60)
CGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTG > SRR4302533.3690671/1‑94 (MQ=60)
CTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGTA > SRR4302533.6010000/1‑94 (MQ=60)
CTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCA > SRR4302533.3686440/1‑94 (MQ=60)
CTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCA > SRR4302533.1033158/1‑94 (MQ=60)
TGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCAC < SRR4302533.2858919/94‑1 (MQ=60)
TGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCAC < SRR4302533.4769132/94‑1 (MQ=60)
GGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCCCCCATACTGTGCTGCACG > SRR4302533.1308089/1‑94 (MQ=60)
GCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCACCCAATACTGTGCTGCACGG > SRR4302533.3674612/1‑94 (MQ=60)
CGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAG > SRR4302533.5673711/1‑94 (MQ=60)
CGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAG > SRR4302533.831938/1‑94 (MQ=60)
CGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAG > SRR4302533.3833595/1‑94 (MQ=60)
CGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAG < SRR4302533.1384013/94‑1 (MQ=60)
GTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGT > SRR4302533.4787566/1‑94 (MQ=60)
GTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGT < SRR4302533.5159409/94‑1 (MQ=60)
CCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTAC < SRR4302533.1614970/94‑1 (MQ=60)
CCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTAC > SRR4302533.4687845/1‑94 (MQ=60)
CGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACG < SRR4302533.3707888/94‑1 (MQ=60)
CGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACG < SRR4302533.5316219/94‑1 (MQ=60)
CGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACG > SRR4302533.5572055/1‑94 (MQ=60)
CGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTCCAAGAGATACGCGC > SRR4302533.1136793/1‑94 (MQ=60)
GGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCC < SRR4302533.1322977/94‑1 (MQ=60)
GGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCC > SRR4302533.498759/1‑94 (MQ=60)
GGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCC > SRR4302533.4673373/1‑94 (MQ=60)
GCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCG < SRR4302533.4695958/94‑1 (MQ=60)
GCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCG > SRR4302533.4110319/1‑94 (MQ=60)
CGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCA > SRR4302533.2704865/1‑94 (MQ=60)
CGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCA > SRR4302533.1272535/1‑94 (MQ=60)
CGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCA > SRR4302533.6153425/1‑94 (MQ=60)
CGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCA > SRR4302533.947277/1‑94 (MQ=60)
CGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCA > SRR4302533.5338267/1‑94 (MQ=60)
CGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCA > SRR4302533.448440/1‑94 (MQ=60)
GAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGCTCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAG > SRR4302533.2374368/1‑94 (MQ=60)
GAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAG > SRR4302533.366920/1‑94 (MQ=60)
GAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATG > SRR4302533.3490503/1‑94 (MQ=60)
AATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGG < SRR4302533.5111849/94‑1 (MQ=60)
AATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGG < SRR4302533.4997978/94‑1 (MQ=60)
ATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGA > SRR4302533.3079662/1‑94 (MQ=60)
TGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGATACGCGCCGACCAGATGGAG > SRR4302533.2824849/1‑94 (MQ=60)
TCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTG > SRR4302533.3354513/1‑94 (MQ=60)
CATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGG > SRR4302533.1817774/1‑94 (MQ=60)
CATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGG < SRR4302533.1881467/94‑1 (MQ=60)
ATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGG > SRR4302533.4544157/1‑94 (MQ=60)
ATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGG > SRR4302533.354366/1‑94 (MQ=60)
TGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGC < SRR4302533.1611575/94‑1 (MQ=60)
GGCGATTTTAAATACCCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCA < SRR4302533.2382565/94‑1 (MQ=60)
GGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCA < SRR4302533.5937955/94‑1 (MQ=60)
GGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCA < SRR4302533.983953/94‑1 (MQ=60)
GCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAA > SRR4302533.2413160/1‑94 (MQ=60)
CGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAAT > SRR4302533.652661/1‑94 (MQ=60)
GATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATG > SRR4302533.60609/1‑94 (MQ=60)
TTTTAAATAACCCGGCGGCAGCGGGTCCTAACGCGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTT < SRR4302533.383893/94‑1 (MQ=60)
TTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCNNCCAGATGGAGTGGNNAATNTT > SRR4302533.5849551/1‑94 (MQ=60)
TTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTG < SRR4302533.304160/94‑1 (MQ=60)
TTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGG < SRR4302533.1155393/94‑1 (MQ=60)
AAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTT < SRR4302533.2805422/94‑1 (MQ=60)
AAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTT < SRR4302533.4674602/94‑1 (MQ=60)
AAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTT < SRR4302533.938226/94‑1 (MQ=60)
AAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTT < SRR4302533.4222393/94‑1 (MQ=60)
AAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTT < SRR4302533.282138/94‑1 (MQ=60)
AAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTT < SRR4302533.6033217/94‑1 (MQ=60)
AAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTT < SRR4302533.3613307/94‑1 (MQ=60)
TAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGAC > SRR4302533.6271633/1‑94 (MQ=60)
AACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACC < SRR4302533.4314001/94‑1 (MQ=60)
ACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCA < SRR4302533.5910228/94‑1 (MQ=60)
CCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAG > SRR4302533.4383894/1‑94 (MQ=60)
CCGGCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGA < SRR4302533.3864373/94‑1 (MQ=60)
GCGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAA < SRR4302533.3210867/94‑1 (MQ=60)
CGGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAA < SRR4302533.6275217/94‑1 (MQ=60)
GGCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAA > SRR4302533.5505154/1‑94 (MQ=60)
GCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAAC < SRR4302533.4834708/94‑1 (MQ=60)
GCAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAAC < SRR4302533.5823347/94‑1 (MQ=60)
CAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACT > SRR4302533.1434087/1‑94 (MQ=60)
CAGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGGGGGCAATGGTGGTTGACCAGACAAAACT > SRR4302533.2898863/1‑94 (MQ=60)
AGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCTCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTC > SRR4302533.3348602/1‑94 (MQ=60)
AGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTC > SRR4302533.876022/1‑94 (MQ=60)
AGCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGACGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTC > SRR4302533.877419/1‑94 (MQ=60)
GCGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCC < SRR4302533.1855051/94‑1 (MQ=60)
CGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCA < SRR4302533.3667206/94‑1 (MQ=60)
CGGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCA < SRR4302533.2452239/94‑1 (MQ=60)
GGGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCAC > SRR4302533.3868966/1‑94 (MQ=60)
GGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACG < SRR4302533.4055383/94‑1 (MQ=60)
GGTCCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACG > SRR4302533.1205698/1‑94 (MQ=60)
CCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGC > SRR4302533.221578/1‑94 (MQ=60)
CCTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGC > SRR4302533.1392733/1‑94 (MQ=60)
CTAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCC > SRR4302533.507688/1‑94 (MQ=60)
TAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCT < SRR4302533.3239940/94‑1 (MQ=60)
TAACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCT > SRR4302533.2307905/1‑94 (MQ=60)
ACACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTT < SRR4302533.6063298/94‑1 (MQ=60)
CACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTA > SRR4302533.1165817/1‑94 (MQ=60)
CACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTA > SRR4302533.1936351/1‑94 (MQ=60)
ACGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAA > SRR4302533.3335089/1‑94 (MQ=60)
CGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAAT < SRR4302533.5857354/94‑1 (MQ=60)
CGATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAAT > SRR4302533.1265499/1‑94 (MQ=60)
GATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATG > SRR4302533.301990/1‑94 (MQ=60)
GATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATG < SRR4302533.6283045/94‑1 (MQ=60)
ATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGT < SRR4302533.5718745/94‑1 (MQ=60)
ATCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGT < SRR4302533.2514630/94‑1 (MQ=60)
TCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTA < SRR4302533.2125247/94‑1 (MQ=60)
TCCCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTA < SRR4302533.985288/94‑1 (MQ=60)
CCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATC < SRR4302533.293033/94‑1 (MQ=60)
CCCACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATC > SRR4302533.744429/1‑94 (MQ=60)
CACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGG > SRR4302533.3905071/1‑94 (MQ=60)
CACCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGG < SRR4302533.5845100/94‑1 (MQ=60)
CCCAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGG < SRR4302533.518969/94‑1 (MQ=60)
CAATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGACAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCA < SRR4302533.4207429/94‑1 (MQ=60)
ATACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCAGA > SRR4302533.3252059/1‑94 (MQ=60)
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AGCAAACCCGCTGGCGTTCCGGCGGCGTCGAAGAATGTCATGGCGATTTTAAATAACCCGGCGGCAGCGGGTCCTAACACGATCCCCACCAACACTGTGCTGCACGAGTTACGCGCCGACCAGATGGAGTGGGCAATGTTGGTTGACCAGACAAAACTCCACGCGCCTTTAATGTATCGGGCAGA > NC_000913/3129549‑3129733
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
