Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,351,337	T→C	T117A (ACC→GCC)	yhcC ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,351,337	0	T	C	99.7%	1102.1 / NA	351	T117A (ACC→GCC)	yhcC	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (196/154); minor base G (1/0); total (197/154)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 367 total aligned reads displayed.

GTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTAT  >  NC_000913/3351247‑3351426

gTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCAc                                                                                         >  1:4276967/1‑93 (MQ=255)

 tAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCAcc                                                                                        >  1:8560899/1‑93 (MQ=255)

    ccccAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcac                                                                                     <  1:1071180/93‑1 (MQ=255)

    ccccAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcac                                                                                     >  1:6057350/1‑93 (MQ=255)

    ccccAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcac                                                                                     >  2:5831313/1‑93 (MQ=255)

    ccccAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcac                                                                                     >  1:4138335/1‑93 (MQ=255)

    ccccAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcac                                                                                     >  2:8587107/1‑93 (MQ=255)

    ccccAGCTCCAGCCACACTTCATAACCCTGGTCCTTATATTCGCATAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcac                                                                                     >  2:200415/1‑93 (MQ=255)

      ccAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcacac                                                                                   >  1:6960947/1‑93 (MQ=255)

       cAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGTGCACCcacaca                                                                                  >  2:1532349/1‑93 (MQ=255)

       cAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcacaca                                                                                  <  2:8319370/93‑1 (MQ=255)

        aGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcacacac                                                                                 <  1:3226890/93‑1 (MQ=255)

         gCTCCAGCCACACTTCGTACCCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcacacaca                                                                                <  2:5881221/93‑1 (MQ=255)

         gCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCcacacaca                                                                                >  2:744827/1‑93 (MQ=255)

            ccAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAAc                                                                             <  2:6357282/93‑1 (MQ=255)

            ccAGCCACACTTCGGAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCGCACACACACAAAc                                                                             >  2:4809979/1‑93 (MQ=255)

              aGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCg                                                                           >  2:2909350/1‑93 (MQ=255)

                 cacaCTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACa                                                                        >  1:7671355/1‑93 (MQ=255)

                 cacaCTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACa                                                                        >  2:8864406/1‑93 (MQ=255)

                 cacaCTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACa                                                                        >  1:480967/1‑93 (MQ=255)

                   cacTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAat                                                                      >  2:7841962/1‑93 (MQ=255)

                   cacTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAat                                                                      <  1:9575507/93‑1 (MQ=255)

                    acTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAata                                                                     <  1:6534823/93‑1 (MQ=255)

                     cTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAatat                                                                    >  2:7047034/1‑93 (MQ=255)

                        cGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTgg                                                                 >  1:1515004/1‑93 (MQ=255)

                          tAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGcc                                                               >  1:4573924/1‑93 (MQ=255)

                           aaCCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCt                                                              >  1:5036237/1‑93 (MQ=255)

                            aCCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTg                                                             >  2:9085665/1‑93 (MQ=255)

                             cccTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTgg                                                            <  2:7515957/93‑1 (MQ=255)

                              ccTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGc                                                           >  1:1937701/1‑93 (MQ=255)

                                tGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTc                                                         >  2:2638758/1‑93 (MQ=255)

                                 ggTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCa                                                        >  1:5264493/1‑93 (MQ=255)

                                   tCCTTATATTCGCCACGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCTCACACAAACCGACAATATTGGCCTGGCTCAcc                                                      <  1:8992596/93‑1 (MQ=255)

                                      ttATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGcc                                                   <  2:5981356/93‑1 (MQ=255)

                                      ttATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGcc                                                   <  1:8266726/93‑1 (MQ=255)

                                       tataTTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCct                                                  >  1:3408306/1‑93 (MQ=255)

                                       tataTTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCct                                                  >  1:6156817/1‑93 (MQ=255)

                                          atTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCctgct                                               >  2:4477858/1‑93 (MQ=255)

                                          atTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCctgct                                               <  1:6480645/93‑1 (MQ=255)

                                           ttCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCctgctg                                              >  2:6978098/1‑93 (MQ=255)

                                           ttCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCAACACACAACCCGACCATATTGGCCTGGCTACCCGCctcctg                                              >  1:6621058/1‑93 (MQ=255)

                                            tCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGa                                             >  1:2851168/1‑93 (MQ=255)

                                             cGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGAt                                            <  2:4694473/93‑1 (MQ=255)

                                             cGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGGCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGAt                                            <  1:7896811/93‑1 (MQ=255)

                                                aaaGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACa                                         >  1:71443/1‑93 (MQ=255)

                                                 aaGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACAt                                        >  2:398902/1‑93 (MQ=255)

                                                  aGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATa                                       <  1:7776981/93‑1 (MQ=255)

                                                   gCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAg                                      <  2:3408719/93‑1 (MQ=255)

                                                   gCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAg                                      <  2:617984/93‑1 (MQ=255)

                                                    cAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGa                                     <  1:9118572/93‑1 (MQ=255)

                                                     aGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGaa                                    <  2:3206303/93‑1 (MQ=255)

                                                     aGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGaa                                    <  2:98232/93‑1 (MQ=255)

                                                      gATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAAc                                   >  2:9622770/1‑93 (MQ=255)

                                                      gATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAAc                                   >  1:582823/1‑93 (MQ=255)

                                                      gATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAAc                                   <  1:1740760/93‑1 (MQ=255)

                                                      gATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAAc                                   >  1:1693939/1‑93 (MQ=255)

                                                         ccAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgca                                <  1:6270019/93‑1 (MQ=255)

                                                          cAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcag                               <  1:472161/93‑1 (MQ=255)

                                                          cAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcag                               <  2:8063512/93‑1 (MQ=255)

                                                           cgCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcagc                              <  2:2994873/92‑1 (MQ=255)

                                                           aGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcagc                              >  2:5114497/1‑93 (MQ=255)

                                                            gCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcagca                             <  1:3167786/93‑1 (MQ=255)

                                                            gCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACgcagca                             >  1:2698713/1‑93 (MQ=255)

                                                             cACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCAc                            >  2:6813189/1‑93 (MQ=255)

                                                             cACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCAc                            <  1:755711/93‑1 (MQ=255)

                                                              aCCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCAcc                           <  2:1125903/93‑1 (MQ=255)

                                                              aCCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCAcc                           >  2:4974723/1‑93 (MQ=255)

                                                              aCCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCAcc                           <  2:2352961/93‑1 (MQ=255)

                                                               ccGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCt                          >  1:9663046/1‑93 (MQ=255)

                                                               ccGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGATGATACATAGAACGCAGCACCt                          <  1:8357109/93‑1 (MQ=255)

                                                                 gCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGa                        >  1:8052190/1‑93 (MQ=255)

                                                                 gCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGa                        >  1:9376052/1‑93 (MQ=255)

                                                                  cATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGaa                       >  2:9267072/1‑93 (MQ=255)

                                                                  cATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGaa                       <  1:2519622/93‑1 (MQ=255)

                                                                   aTCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAAc                      <  2:8393412/93‑1 (MQ=255)

                                                                   aTCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAAc                      <  1:4453710/93‑1 (MQ=255)

                                                                   aTCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAAc                      >  1:5332456/1‑93 (MQ=255)

                                                                    tCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACt                     >  2:2218252/1‑93 (MQ=255)

                                                                    tCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACt                     >  2:3613034/1‑93 (MQ=255)

                                                                    tCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACt                     >  1:2092589/1‑93 (MQ=255)

                                                                       ggCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTcc                  >  2:9382829/1‑93 (MQ=255)

                                                                         cACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGc                >  1:9973921/1‑93 (MQ=255)

                                                                           cGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaa              >  1:723802/1‑93 (MQ=255)

                                                                            gCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaaa             <  1:10011424/93‑1 (MQ=255)

                                                                            gCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCaaa             <  2:5094609/93‑1 (MQ=255)

                                                                            gCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCCGATACATAGAACGCAGCACCTGAACTTCCGCaaa             >  2:7246924/1‑93 (MQ=255)

                                                                             cAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAg            <  1:367383/93‑1 (MQ=255)

                                                                              aGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAgg           >  2:6740364/1‑93 (MQ=255)

                                                                              aGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAgg           >  2:1697901/1‑93 (MQ=255)

                                                                               gTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGt          >  1:3757504/1‑93 (MQ=255)

                                                                               gTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGt          <  2:6576159/93‑1 (MQ=255)

                                                                                tCCGGGCGGGCACCCACACACAACCCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTg         <  2:5551967/93‑1 (MQ=255)

                                                                                tCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCGGCAAAGGTg         >  1:2354900/1‑93 (MQ=255)

                                                                                tCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTg         <  1:876816/93‑1 (MQ=255)

                                                                                 ccGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGc        <  1:3855747/93‑1 (MQ=255)

                                                                                 ccGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGc        <  2:3786797/93‑1 (MQ=255)

                                                                                      cgggCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGta   >  2:5667486/1‑93 (MQ=255)

                                                                                      cgggCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGta   <  2:1453537/93‑1 (MQ=255)

                                                                                       gggCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGtat  >  1:749645/1‑93 (MQ=255)

                                                                                       gggCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGtat  >  2:3351560/1‑93 (MQ=255)

GTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTAT  >  NC_000913/3351247‑3351426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 207 total aligned reads displayed.

TTTGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGC  >  NC_000913/3351244‑3351430

TTTGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCATAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGC                                                                                               >  SRR4302540.9061418/1‑94 (MQ=60)

TTTGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGC                                                                                               <  SRR4302540.265352/94‑1 (MQ=60)

TTTGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGC                                                                                               <  SRR4302540.6606693/94‑1 (MQ=60)

 TTGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCA                                                                                              <  SRR4302540.8396548/94‑1 (MQ=60)

 TTGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCA                                                                                              >  SRR4302540.5285552/1‑94 (MQ=60)

  TGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCAC                                                                                             >  SRR4302540.4323485/1‑94 (MQ=60)

  TGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCAC                                                                                             >  SRR4302540.6168187/1‑94 (MQ=60)

   GTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACC                                                                                            >  SRR4302540.7849929/1‑94 (MQ=60)

   GTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACC                                                                                            >  SRR4302540.8660328/1‑94 (MQ=60)

    TAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCC                                                                                           <  SRR4302540.4209520/94‑1 (MQ=60)

      GCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCAC                                                                                         >  SRR4302540.703512/1‑94 (MQ=60)

      GCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCAC                                                                                         >  SRR4302540.703511/1‑94 (MQ=60)

      GCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCAC                                                                                         >  SRR4302540.4183111/1‑94 (MQ=60)

      GCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCAC                                                                                         >  SRR4302540.6124672/1‑94 (MQ=60)

       CCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACA                                                                                        >  SRR4302540.3729913/1‑94 (MQ=60)

       CCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACA                                                                                        <  SRR4302540.1082106/94‑1 (MQ=60)

        CCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACAC                                                                                       >  SRR4302540.2714885/1‑94 (MQ=60)

        CCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACAC                                                                                       >  SRR4302540.7038377/1‑94 (MQ=60)

        CCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACAC                                                                                       >  SRR4302540.8752522/1‑94 (MQ=60)

           AGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACA                                                                                    >  SRR4302540.2712126/1‑94 (MQ=60)

           AGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACA                                                                                    >  SRR4302540.8341718/1‑94 (MQ=60)

           AGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACA                                                                                    <  SRR4302540.3261972/94‑1 (MQ=60)

            GCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAA                                                                                   <  SRR4302540.3869958/94‑1 (MQ=60)

             CTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAA                                                                                  >  SRR4302540.4438377/1‑94 (MQ=60)

              TCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAAC                                                                                 <  SRR4302540.3579568/94‑1 (MQ=60)

              TCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAAC                                                                                 >  SRR4302540.9745849/1‑94 (MQ=60)

              TCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAAC                                                                                 >  SRR4302540.2773018/1‑94 (MQ=60)

               CCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACC                                                                                >  SRR4302540.532776/1‑94 (MQ=60)

               CCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACC                                                                                >  SRR4302540.2552060/1‑94 (MQ=60)

                CAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCG                                                                               <  SRR4302540.717500/94‑1 (MQ=60)

                CAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCG                                                                               <  SRR4302540.4779433/94‑1 (MQ=60)

                CAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCG                                                                               >  SRR4302540.663879/1‑94 (MQ=60)

                 AGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGA                                                                              >  SRR4302540.1892626/1‑94 (MQ=60)

                 AGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGA                                                                              >  SRR4302540.7019785/1‑94 (MQ=60)

                   CCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACA                                                                            >  SRR4302540.6314988/1‑94 (MQ=60)

                   CCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACA                                                                            >  SRR4302540.7757894/1‑94 (MQ=60)

                   CCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACA                                                                            >  SRR4302540.486122/1‑94 (MQ=60)

                   CCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACA                                                                            <  SRR4302540.3224265/94‑1 (MQ=60)

                   CCACACTTCGTAACCCTGGCCCTTATATTCGCAACGCAGATCCAGCAACGCATCGGGCACTCAGTCCGGGGGGGCACCCACACACAccacgaca                                                                            >  SRR4302540.486120/1‑86 (MQ=60)

                    CACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAA                                                                           >  SRR4302540.3035075/1‑94 (MQ=60)

                     ACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCATATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAAT                                                                          >  SRR4302540.4527653/1‑94 (MQ=60)

                     ACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAAT                                                                          >  SRR4302540.4453502/1‑94 (MQ=60)

                     ACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAAT                                                                          <  SRR4302540.169464/94‑1 (MQ=60)

                      CACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATA                                                                         >  SRR4302540.7755127/1‑94 (MQ=60)

                      CACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATA                                                                         <  SRR4302540.9688603/94‑1 (MQ=60)

                       CCTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATAT                                                                        <  SRR4302540.5336769/94‑1 (MQ=60)

                       ACTTCGTAACCCTGGTCCTTATATTCGCGAAGCCGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAACAT                                                                        >  SRR4302540.6571894/1‑94 (MQ=60)

                       ACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATAT                                                                        >  SRR4302540.6571895/1‑94 (MQ=60)

                       ACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATAT                                                                        <  SRR4302540.6607357/94‑1 (MQ=60)

                       ACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATAT                                                                        <  SRR4302540.3689777/94‑1 (MQ=60)

                        CTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATT                                                                       <  SRR4302540.9281562/94‑1 (MQ=60)

                        CTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATT                                                                       <  SRR4302540.8789069/94‑1 (MQ=60)

                          TCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGG                                                                     <  SRR4302540.5248512/94‑1 (MQ=60)

                          TCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGG                                                                     >  SRR4302540.1531759/1‑94 (MQ=60)

                           CGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGC                                                                    >  SRR4302540.10009570/1‑94 (MQ=60)

                            GTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACATAAACCGACAATATTGGCC                                                                   <  SRR4302540.2280703/94‑1 (MQ=60)

                            GTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCC                                                                   >  SRR4302540.4623273/1‑94 (MQ=60)

                            GTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCC                                                                   <  SRR4302540.5207922/94‑1 (MQ=60)

                            GTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCC                                                                   <  SRR4302540.933737/94‑1 (MQ=60)

                             TAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCT                                                                  >  SRR4302540.372573/1‑94 (MQ=60)

                             TAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCT                                                                  >  SRR4302540.5090715/1‑94 (MQ=60)

                              AATCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTG                                                                 <  SRR4302540.7908024/94‑1 (MQ=60)

                              AACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTG                                                                 >  SRR4302540.3440479/1‑94 (MQ=60)

                              AACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTG                                                                 <  SRR4302540.1063534/94‑1 (MQ=60)

                              AACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTG                                                                 >  SRR4302540.9308874/1‑94 (MQ=60)

                                CCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGC                                                               >  SRR4302540.1958808/1‑94 (MQ=60)

                                 CCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCT                                                              >  SRR4302540.831732/1‑94 (MQ=60)

                                 CCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCT                                                              <  SRR4302540.897156/94‑1 (MQ=60)

                                  CTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTC                                                             <  SRR4302540.760316/94‑1 (MQ=60)

                                  CTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTC                                                             <  SRR4302540.3918579/94‑1 (MQ=60)

                                  CTGGGCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCGCCCACACACAAccccacactagtgccctcgctc                                                             >  SRR4302540.6907893/1‑72 (MQ=60)

                                   TGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCA                                                            >  SRR4302540.5321937/1‑94 (MQ=60)

                                    GGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCAC                                                           >  SRR4302540.76977/1‑94 (MQ=60)

                                     GTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACC                                                          >  SRR4302540.9144321/1‑94 (MQ=60)

                                     GTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACC                                                          >  SRR4302540.8012233/1‑94 (MQ=60)

                                      TCCTTATATTCGCCACGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCTCACACAAACCGACAATATTGGCCTGGCTCACCG                                                         <  SRR4302540.9100399/94‑1 (MQ=60)

                                      TCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCG                                                         <  SRR4302540.2934661/94‑1 (MQ=60)

                                       CCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGC                                                        >  SRR4302540.3988143/1‑94 (MQ=60)

                                        CTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCC                                                       >  SRR4302540.5855702/1‑94 (MQ=60)

                                        CTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCC                                                       >  SRR4302540.1978934/1‑94 (MQ=60)

                                        CTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCC                                                       >  SRR4302540.6480208/1‑94 (MQ=60)

                                        CTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCC                                                       >  SRR4302540.4714169/1‑94 (MQ=60)

                                        CTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCCCACCGCC                                                       >  SRR4302540.7457928/1‑94 (MQ=60)

                                         TTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCT                                                      <  SRR4302540.8362782/94‑1 (MQ=60)

                                         TTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCT                                                      >  SRR4302540.6225412/1‑94 (MQ=60)

                                          TATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTG                                                     >  SRR4302540.289157/1‑94 (MQ=60)

                                           ATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGC                                                    >  SRR4302540.2484805/1‑94 (MQ=60)

                                            TATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCT                                                   >  SRR4302540.1720854/1‑94 (MQ=60)

                                             ATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTG                                                  <  SRR4302540.6552741/94‑1 (MQ=60)

                                             ATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTG                                                  <  SRR4302540.8111993/94‑1 (MQ=60)

                                             ATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCAACACACAACCCGACCATATTGGCCTGGCTACCCGCCTCCTG                                                  >  SRR4302540.6694372/1‑94 (MQ=60)

                                              TTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGA                                                 >  SRR4302540.2882052/1‑94 (MQ=60)

                                              TTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGA                                                 >  SRR4302540.2882054/1‑94 (MQ=60)

                                               TCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGAT                                                <  SRR4302540.9668221/94‑1 (MQ=60)

                                                CGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGGCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATA                                               <  SRR4302540.7988939/94‑1 (MQ=60)

                                                 GCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATAC                                              <  SRR4302540.641056/94‑1 (MQ=60)

                                                 GCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATAC                                              >  SRR4302540.7256161/1‑94 (MQ=60)

                                                 GCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATAC                                              <  SRR4302540.4535930/94‑1 (MQ=60)

                                                  CAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACA                                             >  SRR4302540.72171/1‑94 (MQ=60)

                                                   AAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACAT                                            >  SRR4302540.3215735/1‑94 (MQ=60)

                                                    AAGCGGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATA                                           <  SRR4302540.3654031/94‑1 (MQ=60)

                                                    AAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATCCATA                                           >  SRR4302540.607731/1‑94 (MQ=60)

                                                    AAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATA                                           >  SRR4302540.1582875/1‑94 (MQ=60)

                                                     AGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAG                                          <  SRR4302540.7805476/94‑1 (MQ=60)

                                                     AGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAG                                          <  SRR4302540.7867895/94‑1 (MQ=60)

                                                     AGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAG                                          >  SRR4302540.5645534/1‑94 (MQ=60)

                                                      GCAGATCCAGCACCGCATCCGGCACGCAGTCGGGGCGGGAACCCACAACCAAACCGACAATATTGTCCTGGCTCACCGCCTGCTGCTACATAGA                                         >  SRR4302540.730976/1‑94 (MQ=60)

                                                      GCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGA                                         >  SRR4302540.1996515/1‑94 (MQ=60)

                                                      GCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGA                                         <  SRR4302540.107741/94‑1 (MQ=60)

                                                       CAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAA                                        >  SRR4302540.5602705/1‑94 (MQ=60)

                                                       CAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAA                                        <  SRR4302540.9228178/94‑1 (MQ=60)

                                                        AGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAAC                                       >  SRR4302540.589125/1‑94 (MQ=60)

                                                        AGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAAC                                       <  SRR4302540.2086854/94‑1 (MQ=60)

                                                        AGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAAC                                       <  SRR4302540.7228064/94‑1 (MQ=60)

                                                        AGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAAC                                       <  SRR4302540.1538804/94‑1 (MQ=60)

                                                        AGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAAC                                       >  SRR4302540.1712306/1‑94 (MQ=60)

                                                         GATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACG                                      >  SRR4302540.8130938/1‑94 (MQ=60)

                                                         GATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACG                                      <  SRR4302540.1759594/94‑1 (MQ=60)

                                                         GATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACG                                      <  SRR4302540.1759592/94‑1 (MQ=60)

                                                         GATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACG                                      >  SRR4302540.4640386/1‑94 (MQ=60)

                                                         GATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACG                                      >  SRR4302540.9108534/1‑94 (MQ=60)

                                                         GATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACG                                      >  SRR4302540.3397219/1‑94 (MQ=60)

                                                           TCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCA                                    >  SRR4302540.109809/1‑94 (MQ=60)

                                                            CCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAG                                   <  SRR4302540.4850283/94‑1 (MQ=60)

                                                            CCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAG                                   <  SRR4302540.6339778/94‑1 (MQ=60)

                                                            CCAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAG                                   <  SRR4302540.6339773/94‑1 (MQ=60)

                                                             CAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGC                                  <  SRR4302540.477220/94‑1 (MQ=60)

                                                             CAGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGC                                  >  SRR4302540.2435768/1‑94 (MQ=60)

                                                              AGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCA                                 <  SRR4302540.4205228/94‑1 (MQ=60)

                                                              AGCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCA                                 >  SRR4302540.2727842/1‑94 (MQ=60)

                                                               GCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTTACCGCCTGCTGATACATAGAACGCAGCAC                                >  SRR4302540.8399845/1‑94 (MQ=60)

                                                               GCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCAC                                >  SRR4302540.7759321/1‑94 (MQ=60)

                                                               GCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCAC                                <  SRR4302540.1717159/94‑1 (MQ=60)

                                                               GCACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCAC                                <  SRR4302540.3202225/94‑1 (MQ=60)

                                                                CACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACC                               <  SRR4302540.6687844/94‑1 (MQ=60)

                                                                CACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACC                               >  SRR4302540.9009465/1‑94 (MQ=60)

                                                                CACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACC                               <  SRR4302540.763767/94‑1 (MQ=60)

                                                                 ACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCT                              >  SRR4302540.9776786/1‑94 (MQ=60)

                                                                 ACCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCT                              >  SRR4302540.9776785/1‑94 (MQ=60)

                                                                  CCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTG                             >  SRR4302540.8194033/1‑94 (MQ=60)

                                                                  CCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTG                             <  SRR4302540.8736892/94‑1 (MQ=60)

                                                                  CCGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGATGATACATAGAACGCAGCACCTG                             <  SRR4302540.8454093/94‑1 (MQ=60)

                                                                   CGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGA                            >  SRR4302540.7125520/1‑94 (MQ=60)

                                                                   CGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGA                            >  SRR4302540.8145709/1‑94 (MQ=60)

                                                                   CGCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGA                            >  SRR4302540.9487665/1‑94 (MQ=60)

                                                                    GCATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAA                           <  SRR4302540.795043/94‑1 (MQ=60)

                                                                     CATCCGGCACGCAGTCCGGGCGGGCACCCACATACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAAC                          >  SRR4302540.5035901/1‑94 (MQ=60)

                                                                     CATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAAC                          <  SRR4302540.1778647/94‑1 (MQ=60)

                                                                     CATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAAC                          <  SRR4302540.2546833/94‑1 (MQ=60)

                                                                     CATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAAC                          >  SRR4302540.5390889/1‑94 (MQ=60)

                                                                     CATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAAC                          >  SRR4302540.599005/1‑94 (MQ=60)

                                                                      ATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACT                         >  SRR4302540.9523615/1‑94 (MQ=60)

                                                                      ATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACT                         >  SRR4302540.2115059/1‑94 (MQ=60)

                                                                      ATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACT                         <  SRR4302540.4501989/94‑1 (MQ=60)

                                                                      ATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACT                         <  SRR4302540.839996/94‑1 (MQ=60)

                                                                      ATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACT                         <  SRR4302540.3767195/94‑1 (MQ=60)

                                                                      ATCCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACT                         >  SRR4302540.3203161/1‑94 (MQ=60)

                                                                        CCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTC                       >  SRR4302540.6009349/1‑94 (MQ=60)

                                                                        CCGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTC                       <  SRR4302540.6438620/94‑1 (MQ=60)

                                                                         CGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCC                      <  SRR4302540.5095599/94‑1 (MQ=60)

                                                                         CGGCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCC                      >  SRR4302540.7588843/1‑94 (MQ=60)

                                                                           GCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGC                    <  SRR4302540.8498491/94‑1 (MQ=60)

                                                                           GCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGC                    >  SRR4302540.10090250/1‑94 (MQ=60)

                                                                           GCACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGC                    >  SRR4302540.8653867/1‑94 (MQ=60)

                                                                             CCGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAA                  <  SRR4302540.4255643/94‑1 (MQ=60)

                                                                             ACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAA                  >  SRR4302540.731558/1‑94 (MQ=60)

                                                                             ACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAA                  >  SRR4302540.5068882/1‑94 (MQ=60)

                                                                             ACGCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCAACGCGTGGTGATACATAGAACGGCGCACATGACCTTCCGCAA                  >  SRR4302540.5068880/1‑94 (MQ=60)

                                                                               GCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAG                <  SRR4302540.1349847/94‑1 (MQ=60)

                                                                               GCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAG                <  SRR4302540.1349848/94‑1 (MQ=60)

                                                                               GCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAG                <  SRR4302540.9185659/94‑1 (MQ=60)

                                                                               GCAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAG                <  SRR4302540.10127996/94‑1 (MQ=60)

                                                                                CAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGG               <  SRR4302540.371168/94‑1 (MQ=60)

                                                                                CAGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGG               <  SRR4302540.9971384/94‑1 (MQ=60)

                                                                                 AGTCCGTGCGGGGACCCACACACAAACTGACAATATTGGCCTTGCTCTCCGCATGCTGATACATAGAATGCAGCACCTGAACTTCCGCAAAGGT              <  SRR4302540.4076090/94‑1 (MQ=60)

                                                                                 AGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGT              >  SRR4302540.2537516/1‑94 (MQ=60)

                                                                                 AGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGT              >  SRR4302540.3798491/1‑94 (MQ=60)

                                                                                 AGTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGG              >  SRR4302540.10108105/1‑94 (MQ=60)

                                                                                  GTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCGGCAAAGGTG             >  SRR4302540.2380268/1‑94 (MQ=60)

                                                                                  GTCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTCGCTCACCGCCTGCTGCGACCTAGACACCCGCACCTGAACTTCCGCAAAGGTC             >  SRR4302540.2380267/1‑94 (MQ=50)

                                                                                   TCCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGC            <  SRR4302540.886127/94‑1 (MQ=60)

                                                                                    CCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCT           <  SRR4302540.3897667/94‑1 (MQ=60)

                                                                                    CCGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCT           >  SRR4302540.4553068/1‑94 (MQ=60)

                                                                                     CGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTG          <  SRR4302540.6170778/94‑1 (MQ=60)

                                                                                     CGGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTG          >  SRR4302540.7648428/1‑94 (MQ=60)

                                                                                      GGGCGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGG         >  SRR4302540.3817193/1‑94 (MQ=60)

                                                                                         CGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTAT      >  SRR4302540.9688953/1‑94 (MQ=60)

                                                                                         CGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTAT      >  SRR4302540.7577868/1‑94 (MQ=60)

                                                                                         CGGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTAT      >  SRR4302540.757625/1‑94 (MQ=60)

                                                                                          GGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATA     >  SRR4302540.2763394/1‑94 (MQ=60)

                                                                                          GGGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATA     >  SRR4302540.3071349/1‑94 (MQ=60)

                                                                                           GGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATAC    <  SRR4302540.2202118/94‑1 (MQ=60)

                                                                                           GGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATAC    <  SRR4302540.2198724/94‑1 (MQ=60)

                                                                                           GGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATAC    <  SRR4302540.3405499/94‑1 (MQ=60)

                                                                                           GGCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATAC    <  SRR4302540.4890204/94‑1 (MQ=60)

                                                                                            GCACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACG   <  SRR4302540.9023096/94‑1 (MQ=60)

                                                                                             CACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGC  >  SRR4302540.9256573/1‑94 (MQ=60)

                                                                                             CACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGC  <  SRR4302540.2257159/94‑1 (MQ=60)

                                                                                             CACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGC  >  SRR4302540.207394/1‑94 (MQ=60)

                                                                                             CACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGC  >  SRR4302540.7525919/1‑94 (MQ=60)

TTTGTAGCCCCAGCTCCAGCCACACTTCGTAACCCTGGTCCTTATATTCGCAAAGCAGATCCAGCACCGCATCCGGCACGCAGTCCGGGCGGGTACCCACACACAAACCGACAATATTGGCCTGGCTCACCGCCTGCTGATACATAGAACGCAGCACCTGAACTTCCGCAAAGGTGCTGGTATACGC  >  NC_000913/3351244‑3351430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`