Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,353,950	A→G	T562A (ACC→GCC)	gltB →	glutamate synthase large subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,353,950	0	A	G	99.6%	896.3 / ‑5.2	279	T562A (ACC→GCC)	gltB	glutamate synthase large subunit
Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (137/141); total (137/142)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.65e-01

Only 100 of 304 total aligned reads displayed.

ATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCACCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCC  >  NC_000913/3353860‑3354039

attattTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCgccgcc                                                                                         >  1:9555198/1‑93 (MQ=255)

 ttattTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGccgcca                                                                                        >  2:372717/1‑93 (MQ=255)

 ttattTACGACTACTCCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGccgcca                                                                                        <  1:3884092/93‑1 (MQ=255)

    tttACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTa                                                                                     >  2:3030590/1‑93 (MQ=255)

    tttACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTa                                                                                     >  2:7856063/1‑93 (MQ=255)

    tttACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTa                                                                                     >  1:6684133/1‑93 (MQ=255)

     ttACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTAt                                                                                    >  1:1760839/1‑93 (MQ=255)

      tccGACTACTTCCGCCAGCAGTTTGCCCAGGGGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATc                                                                                   <  1:6116486/91‑1 (MQ=255)

      tACGACTACTCCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATc                                                                                   <  1:4507016/93‑1 (MQ=255)

        cGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCgg                                                                                 >  2:5725930/1‑93 (MQ=255)

         gACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCggg                                                                                >  1:5008250/1‑92 (MQ=255)

         gACTACTCCCGCCAGCAGTTTGCCCAGGTGACTCACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGt                                                                                <  1:9679976/93‑1 (MQ=255)

          cctactCCCCCCAGCCGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTc                                                                               <  1:3053824/92‑1 (MQ=255)

             tctTCCGCCAGCAGTTGGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTg                                                                            <  1:9027810/92‑1 (MQ=255)

              ctcccGCCAGCAGTTGGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGa                                                                           <  2:6299545/90‑1 (MQ=255)

              ctTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGa                                                                           >  1:6281230/1‑93 (MQ=255)

              ctTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGa                                                                           >  1:8009795/1‑93 (MQ=255)

                tCCGCCAGCAGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGaaa                                                                         <  1:9798264/93‑1 (MQ=255)

                  cGCCAGCAGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATg                                                                       <  2:8884122/93‑1 (MQ=255)

                   gCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGa                                                                      >  2:8631154/1‑93 (MQ=255)

                    ccAGCAGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGaa                                                                     <  1:8819135/93‑1 (MQ=255)

                     cagcagTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAAc                                                                    <  1:2166750/93‑1 (MQ=255)

                        cattttGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTc                                                                 <  1:6212563/90‑1 (MQ=255)

                        cagTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTc                                                                 >  2:2824497/1‑93 (MQ=255)

                        cagTTTGCCCAGGTGACAAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTc                                                                 <  1:2664311/93‑1 (MQ=255)

                          gTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCtt                                                               <  2:4947000/93‑1 (MQ=255)

                           tttGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCttt                                                              >  1:7856761/1‑93 (MQ=255)

                            ttGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCtttt                                                             <  1:5463938/93‑1 (MQ=255)

                              gCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGc                                                           >  1:2895700/1‑93 (MQ=255)

                                 cAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAGCGTGTTTTGCGaa                                                        >  2:9516669/1‑93 (MQ=255)

                                 cAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGaa                                                        >  1:9424754/1‑93 (MQ=255)

                                   ggTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGc                                                      <  2:5304505/93‑1 (MQ=255)

                                    gTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCa                                                     <  2:4613379/93‑1 (MQ=255)

                                    gTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCa                                                     <  2:620485/93‑1 (MQ=255)

                                    gTGACAACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCa                                                     <  2:9792544/93‑1 (MQ=255)

                                     tGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCag                                                    >  1:229247/1‑93 (MQ=255)

                                     ggACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCag                                                    <  2:3460001/92‑1 (MQ=255)

                                      gACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCaga                                                   <  1:5755474/93‑1 (MQ=255)

                                       aCTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCagag                                                  <  2:5866265/93‑1 (MQ=255)

                                       aCTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCagag                                                  >  2:6785753/1‑93 (MQ=255)

                                       aCTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCagag                                                  >  1:7649884/1‑93 (MQ=255)

                                        cgaccccGCCAATCGACCCGCTGCGTGAGGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGACCGTCTTTTGCGAAGCAGAgg                                                 <  1:4848978/89‑1 (MQ=255)

                                          accccGCCAATCGACCCGCTGCGTGAGGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGc                                               <  1:8913453/91‑1 (MQ=255)

                                           ccccGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATCAACGTCTTTTGCGAAGCAGAGGGcc                                              <  2:8853625/92‑1 (MQ=255)

                                           aCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGcc                                              >  1:3535908/1‑93 (MQ=255)

                                            cccGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCa                                             <  1:5111590/93‑1 (MQ=255)

                                             ccGCCAATCGCCCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAg                                            <  1:4768564/93‑1 (MQ=255)

                                             ccGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAg                                            >  2:757258/1‑93 (MQ=255)

                                              cGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAgg                                           <  2:4442661/93‑1 (MQ=255)

                                               gCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGACATGAACGTCTTTTGCGAAGCAGAGGGCCAGgc                                          >  1:1099603/1‑93 (MQ=255)

                                                ccAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGgcg                                         >  1:81949/1‑93 (MQ=255)

                                                ccAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGgcg                                         >  1:4208646/1‑93 (MQ=255)

                                                ccAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGgcg                                         >  2:5150334/1‑93 (MQ=255)

                                                 cAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGgcgc                                        <  1:7475726/93‑1 (MQ=255)

                                                  aaTCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCa                                       >  1:2554156/1‑93 (MQ=255)

                                                   aTCGCCCCGCTGCGAGAAGCGCATGTTATGTCACTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCAc                                      <  2:8472366/93‑1 (MQ=255)

                                                   aTCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGCGCCAGGCGCAc                                      >  2:7978543/1‑93 (MQ=255)

                                                       gcccTCTGCGGGAAGCGCATTTTCTGTCCGTCGCCGCCCGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCCCACCGtt                                  <  1:2149606/92‑1 (MQ=255)

                                                       aCCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGtt                                  <  1:6554751/93‑1 (MQ=255)

                                                        cccGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGttt                                 <  2:3373349/93‑1 (MQ=255)

                                                        cccGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAACCAGAGGGCCAGGCGCACCGttt                                 >  1:201068/1‑93 (MQ=255)

                                                         ccGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTa                                <  1:1655714/93‑1 (MQ=255)

                                                         ccGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTa                                >  1:3347449/1‑93 (MQ=255)

                                                         ccGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTa                                <  1:3758342/93‑1 (MQ=255)

                                                         ccGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTa                                <  1:7940981/93‑1 (MQ=255)

                                                           gCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAg                              >  2:2203769/1‑93 (MQ=255)

                                                           gCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAg                              >  2:2743972/1‑93 (MQ=255)

                                                           gCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAg                              >  2:3187728/1‑93 (MQ=255)

                                                             tGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCt                            <  2:6630752/93‑1 (MQ=255)

                                                             tGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCt                            <  1:8476998/93‑1 (MQ=255)

                                                              gCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCtt                           >  2:2536034/1‑93 (MQ=255)

                                                                gTGAAGTGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTa                         <  1:3968722/93‑1 (MQ=255)

                                                                 tGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTaa                        >  2:4018023/1‑93 (MQ=255)

                                                                  gAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTaaa                       <  2:3606727/93‑1 (MQ=255)

                                                                   aaGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAAt                      <  1:6888810/93‑1 (MQ=255)

                                                                    aGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAACTc                     >  2:9391730/1‑93 (MQ=255)

                                                                    aGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATc                     <  1:6502570/93‑1 (MQ=255)

                                                                      cgcATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGc                   <  2:1607166/93‑1 (MQ=255)

                                                                        cATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACATCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCTCCg                 >  1:1484241/1‑93 (MQ=255)

                                                                         aTGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGa                >  2:2017407/1‑93 (MQ=255)

                                                                          tGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAt               >  1:4617509/1‑93 (MQ=255)

                                                                          tGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAt               >  1:8304862/1‑93 (MQ=255)

                                                                          tGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAt               >  1:5950384/1‑93 (MQ=255)

                                                                           gTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAtt              <  1:8113201/93‑1 (MQ=255)

                                                                           gTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAtt              <  1:7284150/93‑1 (MQ=255)

                                                                            ttATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTc             <  1:1187147/93‑1 (MQ=255)

                                                                            ttATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTc             <  2:7769575/93‑1 (MQ=255)

                                                                            ttATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTc             >  1:9822128/1‑93 (MQ=255)

                                                                              aTGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTg           <  2:6894282/93‑1 (MQ=255)

                                                                              aTGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTg           >  1:4010701/1‑93 (MQ=255)

                                                                               tGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGc          <  2:7266760/93‑1 (MQ=255)

                                                                               tGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGc          >  2:1815228/1‑93 (MQ=255)

                                                                               tGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGCTTAAGCTTTAAATCGCCGATTCTGc          >  2:133396/1‑93 (MQ=255)

                                                                                 tcgctcgcCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGctc        <  1:3905925/93‑1 (MQ=255)

                                                                                  cgctcgcCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGCTTCTGctct       >  2:1028366/1‑93 (MQ=255)

                                                                                   gctcgcCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTa      >  1:1343349/1‑93 (MQ=255)

                                                                                   cctcgcCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTa      <  2:7703671/92‑1 (MQ=255)

                                                                                    ctcgcCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTAc     >  2:238690/1‑93 (MQ=255)

                                                                                      cgccgcCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTc   <  2:606530/93‑1 (MQ=255)

                                                                                      cgccgcCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTc   >  1:3438050/1‑93 (MQ=255)

ATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCACCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCC  >  NC_000913/3353860‑3354039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGCATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCACCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCCGATT  >  NC_000913/3353857‑3354043

CGCATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCG                                                                                               >  SRR4302540.5319349/1‑94 (MQ=60)

 GCATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGC                                                                                              <  SRR4302540.6338696/94‑1 (MQ=60)

  CATTATTTACGCCTACTCCCGCCAGCAGTTTGCCCAGGTGACTACCCCGCCAATCGCCCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCC                                                                                             <  SRR4302540.860516/94‑1 (MQ=60)

  CATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCC                                                                                             >  SRR4302540.3978610/1‑94 (MQ=60)

  CATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCC                                                                                             >  SRR4302540.9668197/1‑94 (MQ=60)

   ATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCA                                                                                            >  SRR4302540.9917246/1‑94 (MQ=60)

   ATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCA                                                                                            >  SRR4302540.3486576/1‑94 (MQ=60)

   ATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCA                                                                                            >  SRR4302540.1200622/1‑94 (MQ=60)

   ATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCA                                                                                            >  SRR4302540.8579436/1‑94 (MQ=60)

    TTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAG                                                                                           >  SRR4302540.6071145/1‑94 (MQ=60)

    TTATTTACGACTACTTCCGCCAGCAGTTTCCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAG                                                                                           <  SRR4302540.3926287/94‑1 (MQ=60)

    TTATTTACGACTACTCCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAG                                                                                           <  SRR4302540.3926288/94‑1 (MQ=60)

     TATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGT                                                                                          >  SRR4302540.3935924/1‑94 (MQ=60)

      ATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTA                                                                                         >  SRR4302540.6757952/1‑94 (MQ=60)

       TTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTAT                                                                                        >  SRR4302540.1779939/1‑94 (MQ=60)

       TTTACGACTACTCCCGCCAGCAGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTAT                                                                                        <  SRR4302540.226001/94‑1 (MQ=60)

        tacCGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATC                                                                                       <  SRR4302540.4040383/91‑1 (MQ=60)

         TCCGACTACTTCCGCCAGCAGTTTGCCCAGGGGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCG                                                                                      <  SRR4302540.6184597/94‑1 (MQ=60)

         TACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCG                                                                                      <  SRR4302540.3572633/94‑1 (MQ=60)

         TACGACTACTTCCGCCAGCAGTTGCCCCAGTTAACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCG                                                                                      <  SRR4302540.9753209/94‑1 (MQ=60)

         TACGACTACTCCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCG                                                                                      <  SRR4302540.4555862/94‑1 (MQ=60)

           CGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGT                                                                                    >  SRR4302540.3911697/1‑94 (MQ=60)

           CGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGG                                                                                    >  SRR4302540.5062485/1‑94 (MQ=60)

            GACTACTCCCGCCAGCAGTTTGCCCAGGTGACTCACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTC                                                                                   <  SRR4302540.9793869/94‑1 (MQ=60)

            GACTACTCCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTC                                                                                   <  SRR4302540.2176669/94‑1 (MQ=60)

             cctactccccCCAGCCGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCG                                                                                  <  SRR4302540.3087331/84‑1 (MQ=60)

             ACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCG                                                                                  >  SRR4302540.3945276/1‑94 (MQ=60)

                TCTTCCGCCAGCAGTTGGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGA                                                                               <  SRR4302540.9136138/94‑1 (MQ=60)

                ACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGA                                                                               >  SRR4302540.8102983/1‑94 (MQ=60)

                ACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGA                                                                               >  SRR4302540.6351127/1‑94 (MQ=60)

                 ctcccgcctgcggtttgccggggtacCTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAA                                                                              <  SRR4302540.6604199/68‑1 (MQ=60)

                 CTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAA                                                                              <  SRR4302540.7723514/94‑1 (MQ=60)

                 CTCCCGCCAGCAGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAA                                                                              <  SRR4302540.3958721/94‑1 (MQ=60)

                 CTCCCGCCAGCAGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAA                                                                              <  SRR4302540.855277/94‑1 (MQ=60)

                   TCCGCCAGCAGTTTGCCCAGGTGCCAAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAAT                                                                            <  SRR4302540.8289429/94‑1 (MQ=60)

                   TCCGCCAGCAGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAAT                                                                            <  SRR4302540.9913007/94‑1 (MQ=60)

                   TCCGCCAGCAGTTTCCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAAT                                                                            <  SRR4302540.8289431/94‑1 (MQ=60)

                    CCGCCAGCAGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATG                                                                           <  SRR4302540.1285322/94‑1 (MQ=60)

                      GCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAA                                                                         >  SRR4302540.6696042/1‑94 (MQ=60)

                       CCAGCAGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAAC                                                                        <  SRR4302540.8921106/94‑1 (MQ=60)

                        CAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACG                                                                       <  SRR4302540.2190097/94‑1 (MQ=60)

                        CAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACG                                                                       >  SRR4302540.6868594/1‑94 (MQ=60)

                         AGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCACTATCGGTCGTGAAATGAACGT                                                                      >  SRR4302540.9805197/1‑94 (MQ=60)

                          GCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTC                                                                     >  SRR4302540.6187403/1‑94 (MQ=60)

                           CATTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCT                                                                    <  SRR4302540.6281692/94‑1 (MQ=60)

                           CAGTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCT                                                                    <  SRR4302540.5228007/94‑1 (MQ=60)

                           CAGTTTGCCCAGGTGACAAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCT                                                                    <  SRR4302540.2693203/94‑1 (MQ=60)

                            gtTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTT                                                                   <  SRR4302540.226043/92‑1 (MQ=60)

                            AGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTT                                                                   >  SRR4302540.3234775/1‑94 (MQ=60)

                             GTTTTCCTAGGTGACAAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTT                                                                  <  SRR4302540.799680/94‑1 (MQ=60)

                             GTTTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTT                                                                  <  SRR4302540.7030770/94‑1 (MQ=60)

                             GTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTT                                                                  >  SRR4302540.5011690/1‑94 (MQ=60)

                             GTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTT                                                                  >  SRR4302540.7948563/1‑94 (MQ=60)

                              ttggcccggtgtgCTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTT                                                                 <  SRR4302540.4107075/81‑1 (MQ=60)

                               TTGCCCAGTTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTG                                                                <  SRR4302540.5936570/94‑1 (MQ=60)

                               TTGCCCAGGTGACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTG                                                                <  SRR4302540.5524078/94‑1 (MQ=60)

                               TTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTG                                                                <  SRR4302540.4651084/94‑1 (MQ=60)

                                tgccaaggcgacgagCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTGATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGC                                                               <  SRR4302540.1434029/79‑1 (MQ=60)

                                TGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGC                                                               >  SRR4302540.2927277/1‑94 (MQ=60)

                                TGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGC                                                               >  SRR4302540.189589/1‑94 (MQ=60)

                                TGCCCAGGTAACAACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGC                                                               <  SRR4302540.1434028/94‑1 (MQ=60)

                                   cgacGTGACTACCCCCCCAATCGACCCGCTGGGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAA                                                            <  SRR4302540.6761922/90‑1 (MQ=60)

                                   CCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAA                                                            >  SRR4302540.5947737/1‑94 (MQ=60)

                                   CCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAA                                                            >  SRR4302540.9536747/1‑94 (MQ=60)

                                    CAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAG                                                           >  SRR4302540.9074494/1‑94 (MQ=60)

                                    CAGGGGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAG                                                           >  SRR4302540.3042640/1‑94 (MQ=60)

                                     AGGTGACTAACCCGCCAATCGACCCGCTTCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGC                                                          >  SRR4302540.8378735/1‑94 (MQ=60)

                                      GGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCA                                                         >  SRR4302540.7597073/1‑94 (MQ=60)

                                      GGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCA                                                         >  SRR4302540.1564969/1‑94 (MQ=60)

                                       GTGCCTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAG                                                        <  SRR4302540.5661868/94‑1 (MQ=60)

                                       GTGCCTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAG                                                        <  SRR4302540.5661869/94‑1 (MQ=60)

                                       GTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAG                                                        >  SRR4302540.231467/1‑94 (MQ=60)

                                       GTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAG                                                        >  SRR4302540.6683368/1‑94 (MQ=60)

                                        TGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGA                                                       <  SRR4302540.636987/94‑1 (MQ=60)

                                         TACTACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAG                                                      <  SRR4302540.9541374/94‑1 (MQ=60)

                                         GACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAG                                                      <  SRR4302540.5819006/94‑1 (MQ=60)

                                         GACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAG                                                      >  SRR4302540.6247093/1‑94 (MQ=60)

                                         GACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAG                                                      >  SRR4302540.4895850/1‑94 (MQ=60)

                                         GACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAG                                                      >  SRR4302540.7736001/1‑94 (MQ=60)

                                           cgacCCCGCCAATCGACCCGCTGCGTGAGGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGACCGTCTTTTGCGAAGCAGAGGG                                                    <  SRR4302540.4900928/90‑1 (MQ=60)

                                           caacCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGG                                                    <  SRR4302540.4900926/90‑1 (MQ=60)

                                             ACCCCGCCAATCGACCCGCTGCGTGAGGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCC                                                  <  SRR4302540.9016674/94‑1 (MQ=60)

                                             ACCCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCAAAGCAGAGGGCC                                                  <  SRR4302540.8193383/94‑1 (MQ=60)

                                             AACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCC                                                  >  SRR4302540.3574514/1‑94 (MQ=60)

                                             AACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCC                                                  >  SRR4302540.9703251/1‑94 (MQ=60)

                                               CCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAG                                                <  SRR4302540.4300959/94‑1 (MQ=60)

                                               CCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAG                                                <  SRR4302540.5166920/94‑1 (MQ=60)

                                                CCGCCAATCGCCCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGG                                               <  SRR4302540.4819490/94‑1 (MQ=60)

                                                CCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGG                                               >  SRR4302540.9625526/1‑94 (MQ=60)

                                                 CGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGACATGAACGTCTTTTGCGAAGCAGAGGGCCAGGC                                              >  SRR4302540.1110926/1‑94 (MQ=60)

                                                 CGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGC                                              >  SRR4302540.9076647/1‑94 (MQ=60)

                                                 CGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGC                                              <  SRR4302540.2167234/94‑1 (MQ=60)

                                                 CGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGC                                              <  SRR4302540.8766085/94‑1 (MQ=60)

                                                  GCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCG                                             >  SRR4302540.4254463/1‑94 (MQ=60)

                                                  GCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCG                                             >  SRR4302540.82809/1‑94 (MQ=60)

                                                  GCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCACCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCG                                             <  SRR4302540.8531925/94‑1 (MQ=60)

                                                  CCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCG                                             <  SRR4302540.238366/94‑1 (MQ=60)

                                                  CCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCG                                             <  SRR4302540.9006205/94‑1 (MQ=60)

                                                  CCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCG                                             <  SRR4302540.3690956/94‑1 (MQ=60)

                                                   CCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGC                                            <  SRR4302540.6161293/94‑1 (MQ=60)

                                                    CAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCA                                           >  SRR4302540.2581675/1‑94 (MQ=60)

                                                    CAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCA                                           <  SRR4302540.7559151/94‑1 (MQ=60)

                                                    CAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCA                                           >  SRR4302540.7796895/1‑94 (MQ=60)

                                                    CAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCA                                           <  SRR4302540.80409/94‑1 (MQ=60)

                                                      ATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACC                                         >  SRR4302540.1892352/1‑94 (MQ=60)

                                                      ATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACC                                         <  SRR4302540.4782858/94‑1 (MQ=60)

                                                      AGCGACCCGCTGCGTGAATCCGATGTTTTGTCGTTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACC                                         <  SRR4302540.3281720/94‑1 (MQ=60)

                                                       TCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCG                                        >  SRR4302540.4650255/1‑94 (MQ=60)

                                                        CGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGT                                       >  SRR4302540.4712764/1‑94 (MQ=60)

                                                        CGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGCCGCACCGT                                       >  SRR4302540.5166411/1‑94 (MQ=60)

                                                         GACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTT                                      >  SRR4302540.9913378/1‑94 (MQ=60)

                                                          GCCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTT                                     <  SRR4302540.2172721/94‑1 (MQ=60)

                                                          GCCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTT                                     <  SRR4302540.6627439/94‑1 (MQ=60)

                                                          GCCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTT                                     <  SRR4302540.2993780/94‑1 (MQ=60)

                                                          ACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTT                                     <  SRR4302540.6627440/94‑1 (MQ=60)

                                                          ACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGCTT                                     >  SRR4302540.1173696/1‑94 (MQ=60)

                                                          ACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAACCAGAGGGCCAGGCGCACCGTTT                                     >  SRR4302540.203050/1‑94 (MQ=60)

                                                           CCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTA                                    >  SRR4302540.3384163/1‑94 (MQ=60)

                                                           CCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTA                                    >  SRR4302540.8070991/1‑94 (MQ=60)

                                                           CCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTA                                    >  SRR4302540.3462240/1‑94 (MQ=60)

                                                            CCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAA                                   <  SRR4302540.3799341/94‑1 (MQ=60)

                                                            CCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAA                                   <  SRR4302540.8033522/94‑1 (MQ=60)

                                                            CCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAA                                   >  SRR4302540.7967454/1‑94 (MQ=60)

                                                            CCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAA                                   <  SRR4302540.1673758/94‑1 (MQ=60)

                                                             CGCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAG                                  >  SRR4302540.9536560/1‑94 (MQ=60)

                                                              GCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGC                                 >  SRR4302540.495428/1‑94 (MQ=60)

                                                              GCTGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGC                                 <  SRR4302540.716431/94‑1 (MQ=60)

                                                                TGCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTT                               <  SRR4302540.8575457/94‑1 (MQ=60)

                                                                 GCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTT                              <  SRR4302540.3418691/94‑1 (MQ=60)

                                                                 GCGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAACCAGAGGGCCAGGCGCACCGTTTAAGCTTT                              >  SRR4302540.2692885/1‑94 (MQ=60)

                                                                  CGTGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTA                             <  SRR4302540.8326785/94‑1 (MQ=60)

                                                                   GTGAAGTGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAA                            <  SRR4302540.4011505/94‑1 (MQ=60)

                                                                   GGGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAA                            <  SRR4302540.1184452/94‑1 (MQ=60)

                                                                    TGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGATGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAA                           >  SRR4302540.9802652/1‑94 (MQ=60)

                                                                    TGAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAA                           >  SRR4302540.10077944/1‑94 (MQ=60)

                                                                     GAAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAAT                          <  SRR4302540.7382398/94‑1 (MQ=60)

                                                                      AAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATC                         <  SRR4302540.6965195/94‑1 (MQ=60)

                                                                      AAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATC                         <  SRR4302540.6333995/94‑1 (MQ=60)

                                                                      AAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATC                         <  SRR4302540.2822357/94‑1 (MQ=60)

                                                                      AAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATC                         >  SRR4302540.9492270/1‑94 (MQ=60)

                                                                      AAGCGCATGTTATGTCGCTCGCCGCCAGTATCGGGCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATC                         >  SRR4302540.6453341/1‑94 (MQ=60)

                                                                       AGCGCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCG                        <  SRR4302540.6574853/94‑1 (MQ=60)

                                                                          GCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCG                     <  SRR4302540.5113304/94‑1 (MQ=60)

                                                                          GCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCG                     >  SRR4302540.8960439/1‑94 (MQ=60)

                                                                          GCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCG                     >  SRR4302540.1500540/1‑94 (MQ=60)

                                                                          GCATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACATCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCTCCG                     >  SRR4302540.1500539/1‑94 (MQ=60)

                                                                            ATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAT                   >  SRR4302540.2818301/1‑94 (MQ=60)

                                                                            ATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAT                   >  SRR4302540.4218258/1‑94 (MQ=60)

                                                                            ATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAT                   <  SRR4302540.2640801/94‑1 (MQ=60)

                                                                            ATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAT                   >  SRR4302540.6016194/1‑94 (MQ=60)

                                                                            ATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAT                   <  SRR4302540.6307484/94‑1 (MQ=60)

                                                                            ATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAT                   >  SRR4302540.4667027/1‑94 (MQ=60)

                                                                            ATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAT                   >  SRR4302540.8401297/1‑94 (MQ=60)

                                                                            ATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAT                   >  SRR4302540.7444169/1‑94 (MQ=60)

                                                                            ATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAT                   >  SRR4302540.6549502/1‑94 (MQ=60)

                                                                            ATGTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGAT                   >  SRR4302540.35863/1‑94 (MQ=60)

                                                                              GTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTC                 >  SRR4302540.9937045/1‑94 (MQ=60)

                                                                              GTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTC                 <  SRR4302540.8207368/94‑1 (MQ=60)

                                                                              GTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTC                 <  SRR4302540.2537142/94‑1 (MQ=60)

                                                                              GTTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTC                 <  SRR4302540.7365435/94‑1 (MQ=60)

                                                                               TTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCT                <  SRR4302540.4405435/94‑1 (MQ=60)

                                                                               TTATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCT                <  SRR4302540.1199391/94‑1 (MQ=60)

                                                                                TATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTG               <  SRR4302540.5303696/94‑1 (MQ=60)

                                                                                TATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTG               >  SRR4302540.4053900/1‑94 (MQ=60)

                                                                                TATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTG               >  SRR4302540.4053899/1‑94 (MQ=60)

                                                                                 ATGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGC              >  SRR4302540.1775824/1‑94 (MQ=60)

                                                                                  TGTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCT             >  SRR4302540.8996763/1‑94 (MQ=60)

                                                                                   GTCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTC            <  SRR4302540.2120472/94‑1 (MQ=60)

                                                                                    TCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCT           <  SRR4302540.3948274/94‑1 (MQ=60)

                                                                                    TCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCT           <  SRR4302540.17061/94‑1 (MQ=60)

                                                                                    TCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCT           <  SRR4302540.4011858/94‑1 (MQ=60)

                                                                                    TCGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCT           <  SRR4302540.467941/94‑1 (MQ=60)

                                                                                     CGCTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTA          >  SRR4302540.1357435/1‑94 (MQ=60)

                                                                                       CTCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACT        >  SRR4302540.7920676/1‑94 (MQ=60)

                                                                                        TCGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTC       >  SRR4302540.3475421/1‑94 (MQ=60)

                                                                                         CGCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCC      >  SRR4302540.8131522/1‑94 (MQ=60)

                                                                                          GCCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCCG     >  SRR4302540.4680673/1‑94 (MQ=60)

                                                                                           CCGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCCGA    >  SRR4302540.1348865/1‑94 (MQ=60)

                                                                                            CGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCCGAT   <  SRR4302540.3449657/94‑1 (MQ=60)

                                                                                            CGCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCCGAT   <  SRR4302540.3449658/94‑1 (MQ=60)

                                                                                            CGCCAGTATAGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCCGAT   >  SRR4302540.5771185/1‑94 (MQ=60)

                                                                                             GCCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCCGATT  <  SRR4302540.6069383/94‑1 (MQ=60)

CGCATTATTTACGACTACTTCCGCCAGCAGTTTGCCCAGGTGACTAACCCGCCAATCGACCCGCTGCGTGAAGCGCATGTTATGTCGCTCGCCACCAGTATCGGTCGTGAAATGAACGTCTTTTGCGAAGCAGAGGGCCAGGCGCACCGTTTAAGCTTTAAATCGCCGATTCTGCTCTACTCCGATT  >  NC_000913/3353857‑3354043

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`