Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,374,263 T→C Q50R (CAA→CGA)  sspB ← stringent starvation protein B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,374,2630TC99.4% 1166.2 / NA 358Q50R (CAA→CGA) sspBstringent starvation protein B
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (176/180);  minor base A (2/0);  total (178/180)
Fisher's exact test for biased strand distribution p-value = 2.47e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 374 total aligned reads displayed.

GGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAC  >  NC_000913/3374173‑3374352
                                                                                          |                                                                                         
 gAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGcc                                                                                        <  2:5826285/93‑1 (MQ=255)
  aaTGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGccc                                                                                       <  2:5744529/93‑1 (MQ=255)
  aaTGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGccc                                                                                       <  1:8616305/93‑1 (MQ=255)
  aaTGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGccc                                                                                       <  1:5815412/93‑1 (MQ=255)
   aTGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCg                                                                                      >  1:6707788/1‑93 (MQ=255)
     gCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTc                                                                                    >  1:6206162/1‑93 (MQ=255)
      ccaccaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCa                                                                                   >  2:9026677/1‑93 (MQ=255)
      ccaccaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCa                                                                                   <  1:3801653/93‑1 (MQ=255)
       caccaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAc                                                                                  >  1:9648659/1‑93 (MQ=255)
       caccaAAGCGCGCGTTAAAGCGCACCTCATCATGCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAc                                                                                  <  1:7478609/93‑1 (MQ=255)
         ccaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAcgc                                                                                >  1:1458647/1‑93 (MQ=255)
         ccaAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAcgc                                                                                <  2:2476671/93‑1 (MQ=255)
          caAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGACCGTCAcgcg                                                                               >  1:2816229/1‑93 (MQ=255)
           aaaGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACgcgc                                                                              <  1:4542687/93‑1 (MQ=255)
            aaGCGCGCGTTAAAGCGCTCCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCa                                                                             <  1:4333093/93‑1 (MQ=255)
            aaGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCa                                                                             <  1:7984438/93‑1 (MQ=255)
              gcgcgcGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCata                                                                           <  1:1360634/93‑1 (MQ=255)
               cgcgcgTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCatat                                                                          >  1:7296885/1‑93 (MQ=255)
                gcgcgTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATAtt                                                                         <  2:1020164/93‑1 (MQ=255)
                gcgcgTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATAtt                                                                         <  1:5206587/93‑1 (MQ=255)
                gcgcgTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATAtt                                                                         <  2:4469380/93‑1 (MQ=255)
                gcgcgTTAAAGCGCACCTCATCATTCGCCAGTTACAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATAtt                                                                         >  2:8824437/1‑93 (MQ=255)
                  gcgGTAAACCTCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTcc                                                                       <  1:3284136/93‑1 (MQ=255)
                   cgTTAAAGCACACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCa                                                                      <  1:7935665/93‑1 (MQ=255)
                     ttAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATa                                                                    >  2:7514913/1‑93 (MQ=255)
                     ttAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATa                                                                    >  1:8958329/1‑93 (MQ=255)
                     ttAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATa                                                                    >  1:3927161/1‑93 (MQ=255)
                     ttAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATa                                                                    >  1:6538802/1‑93 (MQ=255)
                        aaGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGa                                                                 >  2:9544451/1‑93 (MQ=255)
                         aGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGaa                                                                >  1:9751144/1‑93 (MQ=255)
                          gcgcACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAAc                                                               >  1:4995558/1‑93 (MQ=255)
                            gcACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCt                                                             <  2:5552564/93‑1 (MQ=255)
                              cacccatcatTCGCCATTTCCAGATTGCCCACAGCACCCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGc                                                           <  1:918972/89‑1 (MQ=255)
                              aCCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGc                                                           <  1:8091930/93‑1 (MQ=255)
                              aCCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAACGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGc                                                           >  2:3649712/1‑93 (MQ=255)
                               ccTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCa                                                          >  1:8488611/1‑93 (MQ=255)
                                cTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCAc                                                         >  2:1731195/1‑93 (MQ=255)
                                cTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCAc                                                         <  1:1893193/93‑1 (MQ=255)
                                 tcatcaTTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACg                                                        >  1:106771/1‑93 (MQ=255)
                                    tcatTCGCCAGTTCTAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCa                                                     <  2:6900506/93‑1 (MQ=255)
                                    tcatTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCACATATTCCATAGGAACCTGCACGCCa                                                     >  1:6048734/1‑93 (MQ=255)
                                     catTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAg                                                    >  1:4746478/1‑93 (MQ=255)
                                     catTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAg                                                    >  1:6934225/1‑93 (MQ=255)
                                       ttCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAggg                                                  >  2:3903550/1‑93 (MQ=255)
                                        tCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGa                                                 <  2:4053576/93‑1 (MQ=255)
                                          gCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGc                                               >  2:2063350/1‑93 (MQ=255)
                                           ccAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCg                                              >  1:7855224/1‑93 (MQ=255)
                                           ccAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCg                                              >  2:4782106/1‑93 (MQ=255)
                                           ccAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCg                                              >  2:2656891/1‑93 (MQ=255)
                                             aGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTc                                            >  1:7240604/1‑93 (MQ=255)
                                              gTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTca                                           >  2:4194750/1‑93 (MQ=255)
                                              gTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTca                                           >  2:2846951/1‑93 (MQ=255)
                                               ttCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTcac                                          <  1:2133380/93‑1 (MQ=255)
                                               ttCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTcac                                          >  1:369177/1‑93 (MQ=255)
                                                 ccAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTGACAt                                        >  2:3963784/1‑93 (MQ=255)
                                                 ccAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACAt                                        <  2:1202090/93‑1 (MQ=255)
                                                   aGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcc                                      >  1:2681270/1‑93 (MQ=255)
                                                    gATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATcca                                     <  1:8351974/93‑1 (MQ=255)
                                                       tGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccacca                                  <  1:707240/93‑1 (MQ=255)
                                                       tGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccacca                                  <  2:8498335/93‑1 (MQ=255)
                                                         ccGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccaccacc                                >  1:562240/1‑93 (MQ=255)
                                                          cGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATccaccacca                               >  1:5286713/1‑93 (MQ=255)
                                                           gACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAg                              >  2:6518276/1‑93 (MQ=255)
                                                            aCAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAgg                             <  2:6097207/93‑1 (MQ=255)
                                                            aCAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAgg                             <  2:5278409/93‑1 (MQ=255)
                                                             cAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGt                            <  1:9836216/93‑1 (MQ=255)
                                                              aGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTg                           <  2:6288648/93‑1 (MQ=255)
                                                              aGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTg                           >  2:4228120/1‑93 (MQ=255)
                                                              aGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTg                           >  2:7995468/1‑93 (MQ=255)
                                                               gCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgc                          <  1:8794515/93‑1 (MQ=255)
                                                               gCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgc                          <  1:7751363/93‑1 (MQ=255)
                                                               gCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgc                          <  1:1789481/93‑1 (MQ=255)
                                                                cACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgcg                         <  1:4877789/93‑1 (MQ=255)
                                                                  cgcgGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTgcggc                       >  1:5036222/1‑93 (MQ=255)
                                                                    cggcgCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGt                     <  2:7644430/93‑1 (MQ=255)
                                                                    cggcgCAAGGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGt                     <  2:7603108/93‑1 (MQ=255)
                                                                       cgcAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAg                  <  1:758777/93‑1 (MQ=255)
                                                                       cgcAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAg                  >  2:7775759/1‑93 (MQ=255)
                                                                       cgcAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAg                  <  1:4630773/93‑1 (MQ=255)
                                                                        gcAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGc                 <  2:9628956/93‑1 (MQ=255)
                                                                          aaTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTg               >  2:1476586/1‑93 (MQ=255)
                                                                          aaTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTg               >  2:5338013/1‑93 (MQ=255)
                                                                           aTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTgg              >  2:5000929/1‑93 (MQ=255)
                                                                           aTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTgg              >  2:3061304/1‑93 (MQ=255)
                                                                           aTGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTgg              >  2:3588559/1‑93 (MQ=255)
                                                                            tGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGt             >  1:1598028/1‑93 (MQ=255)
                                                                            tGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGt             <  2:7396232/93‑1 (MQ=255)
                                                                             gTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGtt            <  2:7324006/93‑1 (MQ=255)
                                                                             gTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGtt            >  2:8299184/1‑93 (MQ=255)
                                                                               tGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCTGCGTGAGCTGGTTAt          >  2:6787129/1‑93 (MQ=255)
                                                                                 aGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATcc        <  1:5443864/93‑1 (MQ=255)
                                                                                 aGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATcc        >  2:336527/1‑93 (MQ=255)
                                                                                   tACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAg      >  2:8110762/1‑93 (MQ=255)
                                                                                    aCGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGc     <  2:7333466/93‑1 (MQ=255)
                                                                                      gATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCaa   <  2:8641622/93‑1 (MQ=255)
                                                                                       aTTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATGCAGCAAc  >  2:6604529/1‑93 (MQ=255)
                                                                                       aTTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAc  >  1:3041706/1‑93 (MQ=255)
                                                                                       aTTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAc  >  1:9561083/1‑93 (MQ=255)
                                                                                       aTTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAc  <  1:2338560/93‑1 (MQ=255)
                                                                                       aTTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGGTATCCCGCAAc  >  1:5517080/1‑93 (MQ=255)
                                                                                          |                                                                                         
GGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAC  >  NC_000913/3374173‑3374352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 206 total aligned reads displayed.
CGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAACCACT  >  NC_000913/3374170‑3374356
                                                                                             |                                                                                             
CGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTC                                                                                               >  SRR4302540.5062753/1‑94 (MQ=60)
CGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTC                                                                                               <  SRR4302540.6183057/94‑1 (MQ=60)
CGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTC                                                                                               <  SRR4302540.1912262/94‑1 (MQ=60)
 GCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCG                                                                                              <  SRR4302540.131356/94‑1 (MQ=60)
 GCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCG                                                                                              <  SRR4302540.3337239/94‑1 (MQ=60)
 GCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCG                                                                                              >  SRR4302540.189471/1‑94 (MQ=60)
 GCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCG                                                                                              <  SRR4302540.4603000/94‑1 (MQ=60)
  CGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGC                                                                                             >  SRR4302540.3053724/1‑94 (MQ=60)
   GGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCAGGCGGCGCAATGTTGAGTACGATTCGCC                                                                                            >  SRR4302540.4727219/1‑94 (MQ=60)
    GAATTCCCCCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCC                                                                                           <  SRR4302540.3202690/94‑1 (MQ=60)
    GAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCC                                                                                           <  SRR4302540.8728058/94‑1 (MQ=60)
    GAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCC                                                                                           >  SRR4302540.8703126/1‑94 (MQ=60)
     AATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCG                                                                                          >  SRR4302540.6781811/1‑94 (MQ=60)
     AATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCG                                                                                          <  SRR4302540.8716411/94‑1 (MQ=60)
     AATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCG                                                                                          <  SRR4302540.5879691/94‑1 (MQ=60)
      ATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGC                                                                                         >  SRR4302540.6055216/1‑94 (MQ=60)
       TGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTC                                                                                        >  SRR4302540.8704748/1‑94 (MQ=60)
       TGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTC                                                                                        >  SRR4302540.6275240/1‑94 (MQ=60)
        GCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCA                                                                                       <  SRR4302540.2262815/94‑1 (MQ=60)
         CCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAC                                                                                      >  SRR4302540.9762280/1‑94 (MQ=60)
         CCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAC                                                                                      <  SRR4302540.3843066/94‑1 (MQ=60)
         CCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAC                                                                                      <  SRR4302540.5514833/94‑1 (MQ=60)
         CCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCAC                                                                                      <  SRR4302540.5405754/94‑1 (MQ=60)
          CACCAAAGCGCGCGTTAAAGCGCACCTCATCATGCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACG                                                                                     <  SRR4302540.7562074/94‑1 (MQ=60)
           CCCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGC                                                                                    <  SRR4302540.7376104/94‑1 (MQ=60)
           ACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGC                                                                                    >  SRR4302540.1474522/1‑94 (MQ=60)
           ACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGC                                                                                    >  SRR4302540.1990978/1‑94 (MQ=60)
           ACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAACACGCGGCGCAGCGATGAGTACGATTCGCCCGCCACGC                                                                                    >  SRR4302540.1474227/1‑94 (MQ=60)
            CCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCG                                                                                   >  SRR4302540.1548648/1‑94 (MQ=60)
            CCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCG                                                                                   <  SRR4302540.608408/94‑1 (MQ=60)
            CCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCG                                                                                   <  SRR4302540.5608536/94‑1 (MQ=60)
            CCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGACCGTCACGCG                                                                                   >  SRR4302540.2846653/1‑94 (MQ=60)
             CAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGA                                                                                  >  SRR4302540.3932043/1‑94 (MQ=60)
              AAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCA                                                                                 <  SRR4302540.4591846/94‑1 (MQ=60)
              AAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCA                                                                                 >  SRR4302540.3913454/1‑94 (MQ=60)
               AAGCGCGCGTTAAAGCGCTCCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCAT                                                                                <  SRR4302540.4380260/94‑1 (MQ=60)
               AAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCAT                                                                                <  SRR4302540.8077418/94‑1 (MQ=60)
               AAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCAT                                                                                <  SRR4302540.5450026/94‑1 (MQ=60)
               AAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCAT                                                                                <  SRR4302540.8077420/94‑1 (MQ=60)
               AAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCAT                                                                                <  SRR4302540.3209043/94‑1 (MQ=60)
                AGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATA                                                                               <  SRR4302540.4816606/94‑1 (MQ=60)
                AGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATA                                                                               >  SRR4302540.7325593/1‑94 (MQ=60)
                AGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATA                                                                               <  SRR4302540.4816607/94‑1 (MQ=60)
                AGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATA                                                                               >  SRR4302540.4985885/1‑94 (MQ=60)
                AGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATA                                                                               >  SRR4302540.4985887/1‑94 (MQ=60)
                AGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATA                                                                               >  SRR4302540.1214453/1‑94 (MQ=60)
                 GCGCGCGTTAAAGCGCGCCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATAT                                                                              >  SRR4302540.9911737/1‑94 (MQ=60)
                 GCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATAT                                                                              <  SRR4302540.349810/94‑1 (MQ=60)
                 GCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATAT                                                                              <  SRR4302540.1374993/94‑1 (MQ=60)
                 GCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATAT                                                                              >  SRR4302540.7378320/1‑94 (MQ=60)
                  CGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATT                                                                             <  SRR4302540.6150133/94‑1 (MQ=60)
                  CGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATT                                                                             <  SRR4302540.7428286/94‑1 (MQ=60)
                   GCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTC                                                                            <  SRR4302540.5263302/94‑1 (MQ=60)
                    CGCGTTAAAGCGCCCCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCC                                                                           <  SRR4302540.7960138/94‑1 (MQ=60)
                     GCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCA                                                                          <  SRR4302540.1450515/94‑1 (MQ=60)
                     GCGGTAAACCTCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCA                                                                          <  SRR4302540.3320037/94‑1 (MQ=60)
                      CGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCAT                                                                         >  SRR4302540.2927382/1‑94 (MQ=60)
                      CGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCAT                                                                         >  SRR4302540.3606493/1‑94 (MQ=60)
                      CGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCAT                                                                         >  SRR4302540.8237989/1‑94 (MQ=60)
                      CGTTAAAGCACACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCAT                                                                         <  SRR4302540.8028156/94‑1 (MQ=60)
                       GTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATA                                                                        >  SRR4302540.9064217/1‑94 (MQ=60)
                       GTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATA                                                                        >  SRR4302540.6611363/1‑94 (MQ=60)
                       GTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATA                                                                        >  SRR4302540.1883698/1‑94 (MQ=60)
                       GTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATA                                                                        >  SRR4302540.3969642/1‑94 (MQ=60)
                        TTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAG                                                                       <  SRR4302540.5290478/94‑1 (MQ=60)
                        TTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAG                                                                       <  SRR4302540.5290477/94‑1 (MQ=60)
                        TTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAG                                                                       <  SRR4302540.7112476/94‑1 (MQ=60)
                        TTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTACAGAG                                                                       >  SRR4302540.2498934/1‑94 (MQ=60)
                          AAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGA                                                                     <  SRR4302540.8571205/94‑1 (MQ=60)
                          AAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGA                                                                     <  SRR4302540.7514156/94‑1 (MQ=60)
                           AAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAA                                                                    <  SRR4302540.9753039/94‑1 (MQ=60)
                           AAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAA                                                                    >  SRR4302540.9865565/1‑94 (MQ=60)
                           AAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAA                                                                    <  SRR4302540.1391742/94‑1 (MQ=60)
                           AAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAA                                                                    >  SRR4302540.9083423/1‑94 (MQ=60)
                            AGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAAC                                                                   >  SRR4302540.5049637/1‑94 (MQ=60)
                             GCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACC                                                                  <  SRR4302540.4713865/94‑1 (MQ=60)
                              CGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCT                                                                 >  SRR4302540.6278980/1‑94 (MQ=60)
                              CGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCT                                                                 <  SRR4302540.6505882/94‑1 (MQ=60)
                                CACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGC                                                               >  SRR4302540.8041628/1‑94 (MQ=60)
                                CACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGC                                                               >  SRR4302540.1676497/1‑94 (MQ=60)
                                CACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGC                                                               >  SRR4302540.9659704/1‑94 (MQ=60)
                                CACC‑CATCATTCGCCATTTCCAGATTGCCCACAGCACCCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCA                                                              <  SRR4302540.928667/94‑1 (MQ=60)
                                 ACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCA                                                              <  SRR4302540.8185858/94‑1 (MQ=60)
                                 ACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCA                                                              >  SRR4302540.8587239/1‑94 (MQ=60)
                                  CCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCAC                                                             <  SRR4302540.7005460/94‑1 (MQ=60)
                                  CCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCAC                                                             >  SRR4302540.2216068/1‑94 (MQ=60)
                                   CTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACG                                                            >  SRR4302540.107918/1‑94 (MQ=60)
                                   CTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACG                                                            <  SRR4302540.4505991/94‑1 (MQ=60)
                                   CTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACG                                                            <  SRR4302540.1913913/94‑1 (MQ=60)
                                    TCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGC                                                           <  SRR4302540.641010/94‑1 (MQ=60)
                                    CCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGC                                                           <  SRR4302540.2782605/94‑1 (MQ=60)
                                      ATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCACATATTCCATAGGAACCTGCACGCCA                                                         >  SRR4302540.6115943/1‑94 (MQ=60)
                                       TCATTCGCTAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAG                                                        <  SRR4302540.5131727/94‑1 (MQ=60)
                                       TCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAG                                                        >  SRR4302540.4797127/1‑94 (MQ=60)
                                       TCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAG                                                        >  SRR4302540.4796858/1‑94 (MQ=60)
                                       TCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAG                                                        >  SRR4302540.7011396/1‑94 (MQ=60)
                                        CATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGG                                                       <  SRR4302540.1967673/94‑1 (MQ=60)
                                        CATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGG                                                       <  SRR4302540.7765053/94‑1 (MQ=60)
                                        CATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGG                                                       >  SRR4302540.5873578/1‑94 (MQ=60)
                                         ATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGG                                                      >  SRR4302540.2162490/1‑94 (MQ=60)
                                         ATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGG                                                      <  SRR4302540.8856405/94‑1 (MQ=60)
                                          TTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGA                                                     >  SRR4302540.1966825/1‑94 (MQ=60)
                                          TTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGA                                                     >  SRR4302540.5657158/1‑94 (MQ=60)
                                          TTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGA                                                     <  SRR4302540.1499079/94‑1 (MQ=60)
                                          TTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGA                                                     <  SRR4302540.8449199/94‑1 (MQ=60)
                                           TCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAG                                                    <  SRR4302540.6695887/94‑1 (MQ=60)
                                           TCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAG                                                    <  SRR4302540.5293665/94‑1 (MQ=60)
                                            CGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGC                                                   <  SRR4302540.5081656/94‑1 (MQ=60)
                                            CGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGC                                                   >  SRR4302540.6143266/1‑94 (MQ=60)
                                            CGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGC                                                   <  SRR4302540.6147541/94‑1 (MQ=60)
                                            CGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGC                                                   <  SRR4302540.9396620/94‑1 (MQ=60)
                                            CGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGC                                                   <  SRR4302540.8117016/94‑1 (MQ=60)
                                            CGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGC                                                   <  SRR4302540.8117017/94‑1 (MQ=60)
                                            CGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGC                                                   <  SRR4302540.7867888/94‑1 (MQ=60)
                                             GCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCG                                                  >  SRR4302540.7947011/1‑94 (MQ=60)
                                             GCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCG                                                  >  SRR4302540.7947010/1‑94 (MQ=60)
                                              CCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAAGCTGCACGCCAGGGAGCGT                                                 >  SRR4302540.5064240/1‑94 (MQ=60)
                                               CAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCTGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTC                                                <  SRR4302540.7442575/94‑1 (MQ=60)
                                               CAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTC                                                >  SRR4302540.7321369/1‑94 (MQ=60)
                                                 GTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCAC                                              >  SRR4302540.372983/1‑94 (MQ=60)
                                                 GTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCAC                                              >  SRR4302540.112346/1‑94 (MQ=60)
                                                 CTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCAC                                              <  SRR4302540.9775165/94‑1 (MQ=60)
                                                  TTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACA                                             <  SRR4302540.2156282/94‑1 (MQ=60)
                                                   TCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACAT                                            <  SRR4302540.8498596/94‑1 (MQ=60)
                                                    CCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATC                                           >  SRR4302540.7206051/1‑94 (MQ=60)
                                                    CCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGCGAGCGACACATC                                           >  SRR4302540.5650202/1‑94 (MQ=60)
                                                     CAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCC                                          >  SRR4302540.2710268/1‑94 (MQ=60)
                                                     CAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCC                                          <  SRR4302540.7640686/94‑1 (MQ=60)
                                                     CAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCC                                          >  SRR4302540.6837936/1‑94 (MQ=60)
                                                     CAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCC                                          >  SRR4302540.7948558/1‑94 (MQ=60)
                                                      AGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCA                                         >  SRR4302540.4255390/1‑94 (MQ=60)
                                                      AGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGCCACATCCA                                         >  SRR4302540.4299308/1‑94 (MQ=60)
                                                       GATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCAC                                        <  SRR4302540.5713655/94‑1 (MQ=60)
                                                       GATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCAC                                        <  SRR4302540.8093474/94‑1 (MQ=60)
                                                        ATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCACCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACC                                       >  SRR4302540.9950228/1‑94 (MQ=60)
                                                         TTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCA                                      <  SRR4302540.557454/94‑1 (MQ=60)
                                                          TGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCTCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCAC                                     <  SRR4302540.5250209/94‑1 (MQ=60)
                                                          TGCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCAC                                     <  SRR4302540.714840/94‑1 (MQ=60)
                                                           GCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACC                                    <  SRR4302540.8593828/94‑1 (MQ=60)
                                                           GCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACC                                    <  SRR4302540.3866352/94‑1 (MQ=60)
                                                           GCCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACC                                    >  SRR4302540.568353/1‑94 (MQ=60)
                                                            CCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCA                                   <  SRR4302540.375655/94‑1 (MQ=60)
                                                            CCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCA                                   <  SRR4302540.8988575/94‑1 (MQ=60)
                                                            CCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCA                                   >  SRR4302540.5344484/1‑94 (MQ=60)
                                                            CCGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCA                                   >  SRR4302540.7845700/1‑94 (MQ=60)
                                                             CGACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAG                                  <  SRR4302540.8958663/94‑1 (MQ=60)
                                                              GACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGG                                 <  SRR4302540.6976276/94‑1 (MQ=60)
                                                              GACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGG                                 >  SRR4302540.1809132/1‑94 (MQ=60)
                                                              GACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGG                                 >  SRR4302540.6738885/1‑94 (MQ=60)
                                                              GACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGG                                 <  SRR4302540.1535403/94‑1 (MQ=60)
                                                               ACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGTAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGC                                >  SRR4302540.7119785/1‑94 (MQ=60)
                                                               ACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGTAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGC                                >  SRR4302540.7119786/1‑94 (MQ=60)
                                                               ACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGT                                <  SRR4302540.1472307/94‑1 (MQ=60)
                                                               ACAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGT                                <  SRR4302540.5174208/94‑1 (MQ=60)
                                                                CAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTG                               >  SRR4302540.3262454/1‑94 (MQ=60)
                                                                CAGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTG                               >  SRR4302540.5991943/1‑94 (MQ=60)
                                                                 AGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGC                              >  SRR4302540.3777501/1‑94 (MQ=60)
                                                                 AGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGC                              >  SRR4302540.513400/1‑94 (MQ=60)
                                                                 AGCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGC                              >  SRR4302540.9564147/1‑94 (MQ=60)
                                                                 AGCACGCGGCGCAATGTTGAGTACGAGTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGC                              <  SRR4302540.4849007/94‑1 (MQ=60)
                                                                  GCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCG                             <  SRR4302540.7841890/94‑1 (MQ=60)
                                                                  GCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCG                             <  SRR4302540.8896226/94‑1 (MQ=60)
                                                                  GCACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCG                             <  SRR4302540.1808933/94‑1 (MQ=60)
                                                                   CACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGG                            <  SRR4302540.9912881/94‑1 (MQ=60)
                                                                   CACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGG                            <  SRR4302540.4930157/94‑1 (MQ=60)
                                                                    ACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGC                           >  SRR4302540.5090700/1‑94 (MQ=60)
                                                                    ACGCGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGC                           <  SRR4302540.174505/94‑1 (MQ=60)
                                                                       CGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCGCGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTG                        <  SRR4302540.465343/94‑1 (MQ=60)
                                                                       CGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTG                        <  SRR4302540.2745887/94‑1 (MQ=60)
                                                                       CGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTG                        <  SRR4302540.465344/94‑1 (MQ=60)
                                                                       CGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTG                        >  SRR4302540.761802/1‑94 (MQ=60)
                                                                       CGGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTG                        <  SRR4302540.9187758/94‑1 (MQ=60)
                                                                        GGCGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGA                       >  SRR4302540.10001481/1‑94 (MQ=60)
                                                                          CGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGC                     <  SRR4302540.766851/94‑1 (MQ=60)
                                                                          CGCAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGC                     <  SRR4302540.4680373/94‑1 (MQ=60)
                                                                            CAATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGAGTCACATCCACCACCAGGTGCGGCGTGAGCTG                   >  SRR4302540.8351121/1‑94 (MQ=60)
                                                                              ATGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGT                 >  SRR4302540.1615499/1‑94 (MQ=60)
                                                                               TGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCCGGGAGCGTCACATCCACCACCAGGTGCCGCGTGACCTGGTT                >  SRR4302540.7838839/1‑94 (MQ=60)
                                                                               TGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCATGTTCGGAGTGAGCTGGTT                >  SRR4302540.7838838/1‑94 (MQ=60)
                                                                               TGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTT                <  SRR4302540.3021131/94‑1 (MQ=60)
                                                                               TGTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTT                >  SRR4302540.9718014/1‑94 (MQ=60)
                                                                                GTTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTA               <  SRR4302540.3830825/94‑1 (MQ=60)
                                                                                 TTGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTAT              <  SRR4302540.2823209/94‑1 (MQ=60)
                                                                                  TGAGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATC             <  SRR4302540.7578622/94‑1 (MQ=60)
                                                                                    AGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCA           >  SRR4302540.1822131/1‑94 (MQ=60)
                                                                                    AGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCA           >  SRR4302540.719723/1‑94 (MQ=60)
                                                                                    AGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCA           >  SRR4302540.9775922/1‑94 (MQ=60)
                                                                                    AGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCA           >  SRR4302540.9759949/1‑94 (MQ=60)
                                                                                    AGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCA           <  SRR4302540.5503766/94‑1 (MQ=60)
                                                                                    AGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCA           <  SRR4302540.4458493/94‑1 (MQ=60)
                                                                                    AGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCA           <  SRR4302540.4258820/94‑1 (MQ=60)
                                                                                    AGTACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCA           <  SRR4302540.8722604/94‑1 (MQ=60)
                                                                                     GTGCGATTCGCCCGGCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAG          <  SRR4302540.8074229/94‑1 (MQ=60)
                                                                                       ACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCA        <  SRR4302540.920465/94‑1 (MQ=60)
                                                                                       ACGATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCA        >  SRR4302540.5051588/1‑94 (MQ=60)
                                                                                         GATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAC      >  SRR4302540.9674117/1‑94 (MQ=60)
                                                                                         GATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAAC      >  SRR4302540.3075084/1‑94 (MQ=60)
                                                                                         GATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGGTATCCCGCAAC      >  SRR4302540.5577849/1‑94 (MQ=60)
                                                                                          ATTCGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAACC     <  SRR4302540.2363755/94‑1 (MQ=60)
                                                                                             CGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAACCACT  >  SRR4302540.2392590/1‑94 (MQ=60)
                                                                                             |                                                                                             
CGCGGAATGCCACCAAAGCGCGCGTTAAAGCGCACCTCATCATTCGCCAGTTCCAGATTGCCGACAGCACGCGGCGCAATGTTGAGTACGATTTGCCCGTCACGCGCATATTCCATAGGAACCTGCACGCCAGGGAGCGTCACATCCACCACCAGGTGCGGCGTGAGCTGGTTATCCAGCAACCACT  >  NC_000913/3374170‑3374356

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑