Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,411,069	T→C	T12A (ACC→GCC)	envR ←	putative transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,411,069	0	T	C	100.0%	916.9 / NA	277	T12A (ACC→GCC)	envR	putative transcriptional regulator
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (41/236); total (41/236)

Only 100 of 282 total aligned reads displayed.

TAGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGTCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGGT  >  NC_000913/3410979‑3411158

  gcggcgTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTc                                                                                       >  1:8421672/1‑93 (MQ=255)

  gcggcgTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTc                                                                                       <  1:8746771/93‑1 (MQ=255)

  gcggcgTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTc                                                                                       <  1:5067829/93‑1 (MQ=255)

  gcggcgTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTc                                                                                       <  1:417168/93‑1 (MQ=255)

   cggcgTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCa                                                                                      <  1:6958425/93‑1 (MQ=255)

    ggcgTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCag                                                                                     <  2:7038222/93‑1 (MQ=255)

       gTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGc                                                                                  <  1:8285969/93‑1 (MQ=255)

       gTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGc                                                                                  <  1:708897/93‑1 (MQ=255)

        tCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCt                                                                                 >  2:5334029/1‑93 (MQ=255)

         cGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCtt                                                                                <  2:1088072/93‑1 (MQ=255)

         cGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCtt                                                                                <  2:8041034/93‑1 (MQ=255)

          ggCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTc                                                                               <  2:9740353/93‑1 (MQ=255)

          ggCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTc                                                                               <  1:5906460/93‑1 (MQ=255)

          ggCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTc                                                                               <  2:8558081/93‑1 (MQ=255)

          ggCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTc                                                                               <  1:2820010/93‑1 (MQ=255)

          cgCAATGGCGTTGAGGCGCGTCTTGCCTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTc                                                                               <  1:2177344/92‑1 (MQ=255)

           gCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCg                                                                              <  1:2711107/93‑1 (MQ=255)

           gCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCg                                                                              >  1:4008141/1‑93 (MQ=255)

             aaTGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGc                                                                            <  2:1301047/93‑1 (MQ=255)

              aTGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCt                                                                           >  2:5661864/1‑93 (MQ=255)

               tGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCtt                                                                          >  2:6220672/1‑93 (MQ=255)

                gTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCttt                                                                         >  2:4167926/1‑93 (MQ=255)

                  cGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTgg                                                                       <  2:3501079/93‑1 (MQ=255)

                   gTTGAGCGTCGTCTTGCTGACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGt                                                                      <  2:6633656/93‑1 (MQ=255)

                    ttGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGtt                                                                     >  1:2010214/1‑93 (MQ=255)

                    ttGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGtt                                                                     <  2:4720752/93‑1 (MQ=255)

                    ttGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGtt                                                                     >  1:3595730/1‑93 (MQ=255)

                    ttGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGAtt                                                                     >  1:4944927/1‑93 (MQ=255)

                     tGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTc                                                                    <  2:2606750/93‑1 (MQ=255)

                      gAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCt                                                                   >  1:3901596/1‑93 (MQ=255)

                        gCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCttt                                                                 <  1:3162040/93‑1 (MQ=255)

                         cgtcgtCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCtttt                                                                <  2:9511969/93‑1 (MQ=255)

                         cgtcgtCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCtttt                                                                <  2:896220/93‑1 (MQ=255)

                         cgtcgtCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCtttt                                                                <  1:3775070/93‑1 (MQ=255)

                          gtcgtcTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCttttt                                                               <  1:2479467/93‑1 (MQ=255)

                            cgttTTGTTTACGCCATGCTGTGCAAACTGGGCGTTGGCAGTTTCAATCAGTTCTTGCCGGGCCTTTTGAGTTTTGGTCTTGGTTCTTTTTGc                                                             >  2:9231914/1‑93 (MQ=255)

                            cgtcTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGc                                                             <  1:1649274/93‑1 (MQ=255)

                              tcTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCa                                                           <  2:9578113/93‑1 (MQ=255)

                              tcTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCa                                                           <  2:882044/93‑1 (MQ=255)

                              tcTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCa                                                           >  1:9663165/1‑93 (MQ=255)

                              tcTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCa                                                           <  1:6303581/93‑1 (MQ=255)

                                 tGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGa                                                        <  1:2555844/93‑1 (MQ=255)

                                  gCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGat                                                       <  1:1351306/93‑1 (MQ=255)

                                    ttACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGatta                                                     <  1:459354/93‑1 (MQ=255)

                                    ttACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGatta                                                     <  2:7385702/93‑1 (MQ=255)

                                     tACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaa                                                    <  1:6661105/93‑1 (MQ=255)

                                      aCGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaat                                                   <  1:7547218/93‑1 (MQ=255)

                                       cGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaatt                                                  <  2:3190333/93‑1 (MQ=255)

                                        gCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaatta                                                 <  1:7883894/93‑1 (MQ=255)

                                        gCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaatta                                                 <  1:885338/93‑1 (MQ=255)

                                         ccATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAattat                                                <  2:3147373/93‑1 (MQ=255)

                                         ccATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAattat                                                <  2:9086381/93‑1 (MQ=255)

                                          cATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAattatt                                               <  1:3549282/93‑1 (MQ=255)

                                          cATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAattatt                                               <  2:4537134/93‑1 (MQ=255)

                                           aTGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTc                                              <  1:2379709/93‑1 (MQ=255)

                                           aTGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTc                                              <  1:3070275/93‑1 (MQ=255)

                                            tgctgcGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCa                                             <  2:7245322/93‑1 (MQ=255)

                                            tgctgcGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCa                                             <  1:8503912/93‑1 (MQ=255)

                                             gctgcGCAAACTGGGGGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAg                                            <  1:929290/93‑1 (MQ=255)

                                             gctgcGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAg                                            <  1:3864514/93‑1 (MQ=255)

                                              ctgcGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCAGCTTTGGTTCTTTTTGCCATGATTAATTATTCAgg                                           <  1:5656733/93‑1 (MQ=255)

                                               tgcGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGa                                          <  2:1350489/93‑1 (MQ=255)

                                                gcgcAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGaa                                         <  1:2055328/93‑1 (MQ=255)

                                                  gcAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGaaat                                       <  1:9023296/93‑1 (MQ=255)

                                                  gcAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGaaat                                       <  2:3073369/93‑1 (MQ=255)

                                                  gcAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGaaat                                       <  2:8088547/93‑1 (MQ=255)

                                                     aaCTTGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGaaataaa                                    <  1:8017952/93‑1 (MQ=255)

                                                     aaCTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGaaataaa                                    <  2:5132946/93‑1 (MQ=255)

                                                     aaCTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGaaataaa                                    <  2:6057226/93‑1 (MQ=255)

                                                     aaCTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGaaataaa                                    <  1:3316288/93‑1 (MQ=255)

                                                     aaCTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGaaataaa                                    <  2:2288124/93‑1 (MQ=255)

                                                     aaCTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGaaataaa                                    <  1:6446333/93‑1 (MQ=255)

                                                      aCTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGaaataaat                                   <  1:6057102/93‑1 (MQ=255)

                                                       cTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAaataaata                                  <  1:7212390/93‑1 (MQ=255)

                                                       cTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAaataaata                                  <  1:4173921/93‑1 (MQ=255)

                                                        tGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAatat                                 <  2:3848446/93‑1 (MQ=255)

                                                        tGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAatat                                 <  2:8227727/93‑1 (MQ=255)

                                                         gggCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAatata                                <  2:3758181/93‑1 (MQ=255)

                                                         gggCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAatata                                <  2:4363537/93‑1 (MQ=255)

                                                            cGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTc                             <  1:9484708/93‑1 (MQ=255)

                                                              aTGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGa                           <  1:4418291/93‑1 (MQ=255)

                                                               tGGCAGTTTCTATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGac                          <  1:9732113/93‑1 (MQ=255)

                                                               tGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGac                          <  1:8180332/93‑1 (MQ=255)

                                                                 gCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGacac                        <  2:3337736/93‑1 (MQ=255)

                                                                    gTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACaga                     <  2:9610419/93‑1 (MQ=255)

                                                                     tttCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACagag                    <  2:4156441/93‑1 (MQ=255)

                                                                     tttCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACagag                    >  2:1922646/1‑93 (MQ=255)

                                                                     tttCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATAATTCAGGAAATAAATATATTCGACACagag                    <  2:2137044/93‑1 (MQ=255)

                                                                      ttCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGt                   <  1:1340700/93‑1 (MQ=255)

                                                                       tCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTg                  <  1:9975318/93‑1 (MQ=255)

                                                                       tCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTGTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTg                  <  1:4511229/93‑1 (MQ=255)

                                                                          aTCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTgaga               <  1:5793772/93‑1 (MQ=255)

                                                                              gTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAAt           <  2:6102884/93‑1 (MQ=255)

                                                                                tCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAg         <  1:9208465/93‑1 (MQ=255)

                                                                                  ttGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCg       <  2:2750321/93‑1 (MQ=255)

                                                                                    gCCGGGCCTTCAGAGCTTCGGCTTTGTTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGaa     <  2:6705667/93‑1 (MQ=255)

                                                                                    gCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGaa     <  1:2107897/93‑1 (MQ=255)

                                                                                    gCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGaa     <  1:1876689/93‑1 (MQ=255)

                                                                                    gCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGaa     <  1:4541554/93‑1 (MQ=255)

                                                                                      cGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAgg   <  1:4593524/93‑1 (MQ=255)

TAGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGTCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGGT  >  NC_000913/3410979‑3411158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGTTAGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGT‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGGTTAAT  >  NC_000913/3410976‑3411162

CGTTAGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC                                                                                                <  SRR4302540.2584183/94‑1 (MQ=60)

 GTTAGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑C                                                                                              <  SRR4302540.6278397/94‑1 (MQ=60)

  TTAGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CT                                                                                             <  SRR4302540.5882278/94‑1 (MQ=60)

  TTAGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CT                                                                                             <  SRR4302540.3254066/94‑1 (MQ=60)

  TTAGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CT                                                                                             <  SRR4302540.3030496/94‑1 (MQ=60)

   TAGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTT                                                                                            >  SRR4302540.7371976/1‑94 (MQ=60)

   TAGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTT                                                                                            <  SRR4302540.2043770/94‑1 (MQ=60)

    AGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTC                                                                                           >  SRR4302540.8519427/1‑94 (MQ=60)

    AGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTC                                                                                           <  SRR4302540.861590/94‑1 (MQ=60)

    AGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTC                                                                                           >  SRR4302540.757689/1‑94 (MQ=60)

     GCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCA                                                                                          <  SRR4302540.10059991/94‑1 (MQ=60)

     GCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCA                                                                                          <  SRR4302540.5122622/94‑1 (MQ=60)

     GCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCA                                                                                          <  SRR4302540.8848271/94‑1 (MQ=60)

     GCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCA                                                                                          <  SRR4302540.421548/94‑1 (MQ=60)

     GCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCA                                                                                          <  SRR4302540.421547/94‑1 (MQ=60)

     GCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCA                                                                                          <  SRR4302540.2774465/94‑1 (MQ=60)

      CGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAG                                                                                         <  SRR4302540.535725/94‑1 (MQ=60)

      CGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAG                                                                                         <  SRR4302540.7035836/94‑1 (MQ=60)

       GGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGA                                                                                        <  SRR4302540.3137140/94‑1 (MQ=60)

       GGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGA                                                                                        <  SRR4302540.1916572/94‑1 (MQ=60)

        GCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAG                                                                                       <  SRR4302540.6938438/94‑1 (MQ=60)

        GCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAG                                                                                       <  SRR4302540.2386627/94‑1 (MQ=60)

         CGTCGGCCATGTCGTTGAGCGTCGTCGTGCTTACGCGATGCTGCGCAAGCTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGC                                                                                      <  SRR4302540.9480836/94‑1 (MQ=60)

         CGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGC                                                                                      <  SRR4302540.3941940/94‑1 (MQ=60)

          GTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCT                                                                                     <  SRR4302540.8382207/94‑1 (MQ=60)

          GTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCT                                                                                     <  SRR4302540.5953788/94‑1 (MQ=60)

          GTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCT                                                                                     <  SRR4302540.4570154/94‑1 (MQ=60)

          GTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCT                                                                                     >  SRR4302540.6292017/1‑94 (MQ=60)

          GTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCT                                                                                     <  SRR4302540.716515/94‑1 (MQ=60)

          GTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCT                                                                                     >  SRR4302540.1721602/1‑94 (MQ=60)

          GTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCT                                                                                     >  SRR4302540.9786160/1‑94 (MQ=60)

           TCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTT                                                                                    >  SRR4302540.3520125/1‑94 (MQ=60)

            CGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTC                                                                                   <  SRR4302540.3889015/94‑1 (MQ=60)

            CGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTC                                                                                   >  SRR4302540.3867699/1‑94 (MQ=60)

            CGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTC                                                                                   <  SRR4302540.2734353/94‑1 (MQ=60)

             cgcaatggcgttgaggcgCGTCTTGCCTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCG                                                                                  <  SRR4302540.2200828/76‑1 (MQ=60)

             GGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCG                                                                                  <  SRR4302540.2850467/94‑1 (MQ=60)

             GGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCG                                                                                  >  SRR4302540.4051295/1‑94 (MQ=60)

             GGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCG                                                                                  <  SRR4302540.5971712/94‑1 (MQ=60)

              GCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGG                                                                                 <  SRR4302540.2740340/94‑1 (MQ=60)

               CAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGC                                                                                >  SRR4302540.5072852/1‑94 (MQ=60)

                AATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCT                                                                               >  SRR4302540.2448998/1‑94 (MQ=60)

                AATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCT                                                                               >  SRR4302540.7055271/1‑94 (MQ=60)

                 ATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTT                                                                              >  SRR4302540.8893468/1‑94 (MQ=60)

                 ATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTT                                                                              >  SRR4302540.4626564/1‑94 (MQ=60)

                  TGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTT                                                                             <  SRR4302540.2013113/94‑1 (MQ=60)

                     CGTTTAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTGCTTGCCGGGC‑CTTCAGAGCTTCGGCTTGGGT                                                                          <  SRR4302540.2572488/94‑1 (MQ=60)

                     CGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGT                                                                          >  SRR4302540.5070498/1‑94 (MQ=60)

                      GTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTT                                                                         >  SRR4302540.2031952/1‑94 (MQ=60)

                      GTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTT                                                                         <  SRR4302540.7830672/94‑1 (MQ=60)

                      GTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTT                                                                         <  SRR4302540.408381/94‑1 (MQ=60)

                      GTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTT                                                                         >  SRR4302540.3635022/1‑94 (MQ=60)

                      GTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGATT                                                                         >  SRR4302540.4998307/1‑94 (MQ=60)

                       TTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTC                                                                        <  SRR4302540.4301325/94‑1 (MQ=60)

                       TTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTC                                                                        <  SRR4302540.6485537/94‑1 (MQ=60)

                        TGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCT                                                                       >  SRR4302540.3943922/1‑94 (MQ=60)

                         GAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTT                                                                      >  SRR4302540.2080515/1‑94 (MQ=60)

                           GCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTT                                                                    <  SRR4302540.3196438/94‑1 (MQ=60)

                           GCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTT                                                                    <  SRR4302540.8190806/94‑1 (MQ=60)

                            CGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTT                                                                   <  SRR4302540.3816256/94‑1 (MQ=60)

                            CGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTT                                                                   <  SRR4302540.5701301/94‑1 (MQ=60)

                             gtcgttcttCTTACGCCATGCTGCGCAAACTTGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTG                                                                  <  SRR4302540.7707442/85‑1 (MQ=60)

                             GTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTG                                                                  <  SRR4302540.6710020/94‑1 (MQ=60)

                             GTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTG                                                                  <  SRR4302540.2506171/94‑1 (MQ=60)

                               CGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCC                                                                >  SRR4302540.3089077/1‑94 (MQ=60)

                               CGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCC                                                                <  SRR4302540.1667265/94‑1 (MQ=60)

                                GTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCA                                                               >  SRR4302540.9776905/1‑94 (MQ=60)

                                 TCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCAT                                                              <  SRR4302540.7642848/94‑1 (MQ=60)

                                 TCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCAT                                                              <  SRR4302540.6373773/94‑1 (MQ=60)

                                 TCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCAT                                                              <  SRR4302540.6373774/94‑1 (MQ=60)

                                 TCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCAT                                                              <  SRR4302540.7174469/94‑1 (MQ=60)

                                  CTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATG                                                             >  SRR4302540.9602555/1‑94 (MQ=60)

                                  CTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATG                                                             <  SRR4302540.3606667/94‑1 (MQ=60)

                                   TTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGA                                                            <  SRR4302540.2934569/94‑1 (MQ=60)

                                   TTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGA                                                            >  SRR4302540.1778656/1‑94 (MQ=60)

                                    TGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGAT                                                           <  SRR4302540.4031254/94‑1 (MQ=60)

                                    TGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGAT                                                           <  SRR4302540.4031253/94‑1 (MQ=60)

                                    TGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGAT                                                           <  SRR4302540.2583380/94‑1 (MQ=60)

                                     GCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATT                                                          <  SRR4302540.1365517/94‑1 (MQ=60)

                                      CTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTA                                                         <  SRR4302540.1434019/94‑1 (MQ=60)

                                       TTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAA                                                        <  SRR4302540.464257/94‑1 (MQ=60)

                                       TTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAA                                                        <  SRR4302540.464258/94‑1 (MQ=60)

                                       TTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAA                                                        <  SRR4302540.4208559/94‑1 (MQ=60)

                                        TACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAAT                                                       <  SRR4302540.6734748/94‑1 (MQ=60)

                                        TACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAAT                                                       <  SRR4302540.8011599/94‑1 (MQ=60)

                                        TACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAAT                                                       <  SRR4302540.3240403/94‑1 (MQ=60)

                                         ACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATT                                                      <  SRR4302540.7631804/94‑1 (MQ=60)

                                           GCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTAT                                                    <  SRR4302540.6684353/94‑1 (MQ=60)

                                           GCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTAT                                                    <  SRR4302540.894731/94‑1 (MQ=60)

                                           GCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTAT                                                    <  SRR4302540.7975944/94‑1 (MQ=60)

                                             cacgctgcgcgaaattgtgtATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTC                                                  <  SRR4302540.8301279/74‑1 (MQ=60)

                                             CATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTC                                                  >  SRR4302540.6948811/1‑94 (MQ=60)

                                             CATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTC                                                  <  SRR4302540.8423208/94‑1 (MQ=60)

                                             CATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTC                                                  >  SRR4302540.8977162/1‑94 (MQ=60)

                                             CATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTC                                                  <  SRR4302540.3588057/94‑1 (MQ=60)

                                              CTGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCA                                                 <  SRR4302540.8743041/94‑1 (MQ=60)

                                              ATGGTGCGCAAACTGGGCGATTGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCA                                                 <  SRR4302540.2405351/94‑1 (MQ=60)

                                              ATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCA                                                 <  SRR4302540.3103967/94‑1 (MQ=60)

                                              ATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCA                                                 <  SRR4302540.2405350/94‑1 (MQ=60)

                                               TGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAG                                                <  SRR4302540.8141766/94‑1 (MQ=60)

                                               TGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAG                                                <  SRR4302540.9047899/94‑1 (MQ=60)

                                               TGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAG                                                <  SRR4302540.3925080/94‑1 (MQ=60)

                                               TGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAG                                                <  SRR4302540.8602734/94‑1 (MQ=60)

                                                GCTGCGCAAACTGGGGGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGG                                               <  SRR4302540.939067/94‑1 (MQ=60)

                                                GCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGG                                               <  SRR4302540.3906520/94‑1 (MQ=60)

                                                 CTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCAGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGA                                              <  SRR4302540.5719018/94‑1 (MQ=60)

                                                  CGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAA                                             <  SRR4302540.4298495/94‑1 (MQ=60)

                                                   GCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAA                                            <  SRR4302540.2077453/94‑1 (MQ=60)

                                                    CGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAAT                                           <  SRR4302540.2167002/94‑1 (MQ=60)

                                                     GCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATA                                          <  SRR4302540.2723157/94‑1 (MQ=60)

                                                     GCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATA                                          <  SRR4302540.9131572/94‑1 (MQ=60)

                                                      CAAGCTGGGCGATGGCAGTTTCAATCAGTGCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAA                                         <  SRR4302540.4576310/94‑1 (MQ=60)

                                                      CAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAA                                         <  SRR4302540.6102051/94‑1 (MQ=60)

                                                       AAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAA                                        <  SRR4302540.8594194/94‑1 (MQ=60)

                                                       AAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAA                                        <  SRR4302540.8594193/94‑1 (MQ=60)

                                                        AACTTGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAAT                                       <  SRR4302540.8111204/94‑1 (MQ=60)

                                                        AACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAAT                                       <  SRR4302540.6518091/94‑1 (MQ=60)

                                                        AACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAAT                                       <  SRR4302540.3352652/94‑1 (MQ=60)

                                                         ACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATA                                      <  SRR4302540.4895896/94‑1 (MQ=60)

                                                         ACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATA                                      <  SRR4302540.3182386/94‑1 (MQ=60)

                                                         ACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATA                                      <  SRR4302540.6124421/94‑1 (MQ=60)

                                                          CTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATAT                                     <  SRR4302540.3508306/94‑1 (MQ=60)

                                                          CTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATAT                                     <  SRR4302540.3742579/94‑1 (MQ=60)

                                                          CTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATAT                                     <  SRR4302540.7292792/94‑1 (MQ=60)

                                                          CTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATAT                                     <  SRR4302540.4219209/94‑1 (MQ=60)

                                                            GGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATAT                                   <  SRR4302540.973929/94‑1 (MQ=60)

                                                            GGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATAT                                   <  SRR4302540.5724211/94‑1 (MQ=60)

                                                            GGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATAT                                   <  SRR4302540.9305360/94‑1 (MQ=60)

                                                            GGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATAT                                   <  SRR4302540.3795914/94‑1 (MQ=60)

                                                             GGCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATT                                  <  SRR4302540.8860209/94‑1 (MQ=60)

                                                              GCGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTC                                 <  SRR4302540.9341351/94‑1 (MQ=60)

                                                               CGATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCG                                <  SRR4302540.9597165/94‑1 (MQ=60)

                                                                 ATGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGAC                              <  SRR4302540.4466167/94‑1 (MQ=60)

                                                                  TGGCAGTTTCTATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACA                             <  SRR4302540.9846389/94‑1 (MQ=60)

                                                                  TGGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACA                             <  SRR4302540.8275349/94‑1 (MQ=60)

                                                                   GGCAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACAC                            <  SRR4302540.5805558/94‑1 (MQ=60)

                                                                     CAGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAG                          <  SRR4302540.2554086/94‑1 (MQ=60)

                                                                      AGTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGA                         <  SRR4302540.4505674/94‑1 (MQ=60)

                                                                       GTTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAG                        <  SRR4302540.982788/94‑1 (MQ=60)

                                                                        TTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGT                       <  SRR4302540.4493989/94‑1 (MQ=60)

                                                                        TTTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGT                       <  SRR4302540.2033464/94‑1 (MQ=60)

                                                                         TTCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTG                      <  SRR4302540.1354740/94‑1 (MQ=60)

                                                                          TCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGA                     <  SRR4302540.10091656/94‑1 (MQ=60)

                                                                          TCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGA                     >  SRR4302540.9550868/1‑94 (MQ=60)

                                                                          TCAATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTGTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGA                     <  SRR4302540.4560107/94‑1 (MQ=60)

                                                                             ATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAA                  <  SRR4302540.1436487/94‑1 (MQ=60)

                                                                             ATCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAA                  <  SRR4302540.5857789/94‑1 (MQ=60)

                                                                              TCAGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAA                 <  SRR4302540.6127582/94‑1 (MQ=60)

                                                                                AGTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAAT               <  SRR4302540.8216365/94‑1 (MQ=60)

                                                                                 GTTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATA              <  SRR4302540.8100761/94‑1 (MQ=60)

                                                                                  TTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAG             <  SRR4302540.1359797/94‑1 (MQ=60)

                                                                                  TTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAG             <  SRR4302540.8295472/94‑1 (MQ=60)

                                                                                  TTCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAG             <  SRR4302540.938819/94‑1 (MQ=60)

                                                                                   TCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGC            <  SRR4302540.485274/94‑1 (MQ=60)

                                                                                   TCTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGC            <  SRR4302540.9318959/94‑1 (MQ=60)

                                                                                    CTTGCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCG           <  SRR4302540.4606282/94‑1 (MQ=60)

                                                                                       GCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAG        <  SRR4302540.7234032/94‑1 (MQ=60)

                                                                                       GCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAG        <  SRR4302540.4590705/94‑1 (MQ=60)

                                                                                       GCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAG        <  SRR4302540.1897242/94‑1 (MQ=60)

                                                                                       GCCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAG        <  SRR4302540.2130519/94‑1 (MQ=60)

                                                                                        CCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGG       <  SRR4302540.5911691/94‑1 (MQ=60)

                                                                                        CCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGG       >  SRR4302540.2200329/1‑94 (MQ=60)

                                                                                        CCGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGG       <  SRR4302540.2370343/94‑1 (MQ=60)

                                                                                         CGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGGT      <  SRR4302540.4642949/94‑1 (MQ=60)

                                                                                         CGGGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGGT      <  SRR4302540.3306660/94‑1 (MQ=60)

                                                                                           GGTCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGGTT     <  SRR4302540.5818876/94‑1 (MQ=60)

                                                                                           GGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGGAGGTTA    <  SRR4302540.6158374/94‑1 (MQ=60)

                                                                                           GGC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGGTTA    <  SRR4302540.3997854/94‑1 (MQ=60)

                                                                                            GC‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGGTTAA   <  SRR4302540.3100218/94‑1 (MQ=60)

                                                                                            GC‑CTTCAGAGAGTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGGTTAA   <  SRR4302540.5294126/94‑1 (MQ=60)

                                                                                             G‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGGTTAAT  <  SRR4302540.7731982/94‑1 (MQ=60)

CGTTAGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGT‑CTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGGTTAAT  >  NC_000913/3410976‑3411162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`