Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,434,055 A→G P404P (CCA→CCG)  sun → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,434,0550AG99.8% 1342.8 / ‑5.1 413P404P (CCA→CCG) sunhypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base G (195/216);  total (195/218)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.14e-01

Only 100 of 428 total aligned reads displayed.

CTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCAGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACGG  >  NC_000913/3433965‑3434144
                                                                                          |                                                                                         
cTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCgga                                                                                         <  1:920219/93‑1 (MQ=255)
cTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCgga                                                                                         <  1:8968122/93‑1 (MQ=255)
cTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCgga                                                                                         <  1:6367033/93‑1 (MQ=255)
 tGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCggag                                                                                        <  2:9728311/93‑1 (MQ=255)
  gtccGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGc                                                                                       <  2:1356175/90‑1 (MQ=255)
  gTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGc                                                                                       >  1:9373718/1‑93 (MQ=255)
  gTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGc                                                                                       <  2:9158614/93‑1 (MQ=255)
   ttCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCa                                                                                      >  1:2632866/1‑93 (MQ=255)
   ttCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCa                                                                                      >  2:5469100/1‑93 (MQ=255)
   ttCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCa                                                                                      >  2:5895357/1‑93 (MQ=255)
    tCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGCACACCGGAGCaa                                                                                     >  2:3931229/1‑93 (MQ=255)
    tCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCaa                                                                                     <  1:65743/93‑1 (MQ=255)
     cGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAAc                                                                                    <  2:3694576/93‑1 (MQ=255)
       gtgtTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCg                                                                                  >  1:1045209/1‑93 (MQ=255)
         gtTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCggg                                                                                <  1:3035503/93‑1 (MQ=255)
          ttACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGt                                                                               >  2:1106608/1‑93 (MQ=255)
          ttACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGt                                                                               >  2:8984059/1‑93 (MQ=255)
           tACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTa                                                                              <  2:3288798/93‑1 (MQ=255)
               ggAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACa                                                                          >  1:7245812/1‑93 (MQ=255)
                gAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACaa                                                                         >  1:4871588/1‑93 (MQ=255)
                  agagAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACaaaa                                                                       >  2:6239797/1‑93 (MQ=255)
                   gagaATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAAt                                                                      <  2:7607177/93‑1 (MQ=255)
                   gagaATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAAt                                                                      <  2:3420487/93‑1 (MQ=255)
                      aaTAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTa                                                                   >  1:1621390/1‑93 (MQ=255)
                       aTAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTAc                                                                  <  1:2719123/93‑1 (MQ=255)
                        tAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTAcc                                                                 <  2:4394855/93‑1 (MQ=255)
                        tAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTAcc                                                                 <  1:7668582/93‑1 (MQ=255)
                         aGCCTGCAGATTAAAGCCTTTTTGCAACGTCCCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCt                                                                <  2:2141674/93‑1 (MQ=255)
                          gCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTg                                                               >  1:8563200/1‑93 (MQ=255)
                           ccTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTgg                                                              >  2:1514138/1‑93 (MQ=255)
                            ctccAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGt                                                             <  1:8646540/90‑1 (MQ=255)
                            cTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGt                                                             <  2:502652/93‑1 (MQ=255)
                            cTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGt                                                             >  2:5320070/1‑93 (MQ=255)
                             tGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTg                                                            >  1:823080/1‑93 (MQ=255)
                                 gATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGa                                                        >  1:7453504/1‑93 (MQ=255)
                                  aTTAAAGCCTTTTTGCAACGTACCGCTGATGCCGACCTTTGCGAAACAGGAACGCCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGaa                                                       <  1:2262846/93‑1 (MQ=255)
                                    tAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAaga                                                     <  1:2037654/93‑1 (MQ=255)
                                    tAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAaga                                                     <  2:8191359/93‑1 (MQ=255)
                                    tAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCAGAGCAACCGGTTAAACAAAATCTACCTGGTGCCGAaga                                                     <  1:7080679/93‑1 (MQ=255)
                                     aaaGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAagag                                                    <  1:8038310/93‑1 (MQ=255)
                                     aaaGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAagag                                                    <  1:8323046/93‑1 (MQ=255)
                                       aGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAggg                                                  <  2:1263390/93‑1 (MQ=255)
                                        gCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGc                                                 >  1:427766/1‑93 (MQ=255)
                                        accTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGc                                                 <  1:3556525/92‑1 (MQ=255)
                                           tttttGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGAc                                              >  1:5878575/1‑93 (MQ=255)
                                           tttttGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGAc                                              >  1:1496251/1‑93 (MQ=255)
                                           tttttGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGAc                                              >  2:4494584/1‑93 (MQ=255)
                                           tttttGCAACGTACCGCTGATGCCGAACTTTGCGAAAAAGGAACACCGGAGAACCGGGGGAAACAAATTCTACCTGGTGCCGAAGAGGgagag                                              >  1:2483185/1‑92 (MQ=255)
                                            ttttGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACg                                             <  2:2541470/93‑1 (MQ=255)
                                            ttttGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACg                                             <  1:4461162/93‑1 (MQ=255)
                                               tGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAACCAAAATCTACCTGGTGCCGAAGAGGGCGACGGct                                          <  2:3538229/93‑1 (MQ=255)
                                                gCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGctt                                         <  2:4192310/93‑1 (MQ=255)
                                                  aaCGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGcttct                                       >  1:1360656/1‑93 (MQ=255)
                                                  aaCGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGcttct                                       >  2:6946378/1‑93 (MQ=255)
                                                    cGTCCCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGTGTAAACAAAATCTACCTGGTGTCGAAGAGGGCGACGGCTTCttt                                     <  1:6034503/93‑1 (MQ=255)
                                                     gTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCtttt                                    <  2:3029251/93‑1 (MQ=255)
                                                      tACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTa                                   <  2:56734/93‑1 (MQ=255)
                                                      tACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTa                                   <  2:7818533/93‑1 (MQ=255)
                                                      tACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTa                                   >  1:9646800/1‑93 (MQ=255)
                                                      tACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTa                                   <  2:8792819/93‑1 (MQ=255)
                                                       aCCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTAc                                  <  2:1963450/93‑1 (MQ=255)
                                                        ccGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACg                                 >  2:4715483/1‑93 (MQ=255)
                                                         cGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACgc                                >  2:2787012/1‑93 (MQ=255)
                                                         cGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACgc                                <  1:5547758/93‑1 (MQ=255)
                                                           cTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAACATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTAAgcta                              >  2:1858856/1‑93 (MQ=255)
                                                            tGATGCCGAACTTTGCGTAGCAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACgctaa                             <  2:8955016/93‑1 (MQ=255)
                                                            tGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACgctaa                             <  2:8341061/93‑1 (MQ=255)
                                                            tGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACgctaa                             <  1:6900311/93‑1 (MQ=255)
                                                            tGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACgctaa                             <  1:2441655/93‑1 (MQ=255)
                                                             gATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACgctaag                            <  1:7737593/93‑1 (MQ=255)
                                                             gATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACgctaag                            >  2:796354/1‑93 (MQ=255)
                                                             gATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACgctaag                            >  1:1805728/1‑93 (MQ=255)
                                                              aTGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACgctaagc                           >  2:5763044/1‑93 (MQ=255)
                                                                gCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACgctaagcta                         <  1:4680706/93‑1 (MQ=255)
                                                                 ccGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACgctaagctaa                        <  1:6433503/93‑1 (MQ=255)
                                                                 ccGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACgctaagctaa                        <  1:3406374/93‑1 (MQ=255)
                                                                  cGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAAt                       <  2:6478240/93‑1 (MQ=255)
                                                                   gAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATc                      <  1:1699311/93‑1 (MQ=255)
                                                                    aaCTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCa                     >  1:5177055/1‑93 (MQ=255)
                                                                     aCTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCaa                    <  1:5404602/93‑1 (MQ=255)
                                                                       tttGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCaaaa                  <  1:4030781/93‑1 (MQ=255)
                                                                       tttGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCaaaa                  >  2:4269023/1‑93 (MQ=255)
                                                                       tttGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCaaaa                  >  2:7328686/1‑93 (MQ=255)
                                                                       tttGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCaaaa                  <  2:6621166/93‑1 (MQ=255)
                                                                       tttGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCaaaa                  <  1:3760866/93‑1 (MQ=255)
                                                                        ttGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCaaaaa                 <  2:9459955/93‑1 (MQ=255)
                                                                            gAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGtga             <  2:4825768/93‑1 (MQ=255)
                                                                             aaaCAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGtgat            <  1:9917595/93‑1 (MQ=255)
                                                                              aaCAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGtgatg           <  1:3990328/93‑1 (MQ=255)
                                                                              aaCAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGtgatg           <  2:8688719/93‑1 (MQ=255)
                                                                               aCAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGtgatga          <  1:2897015/93‑1 (MQ=255)
                                                                                cAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATgag         >  2:8613776/1‑93 (MQ=255)
                                                                                  ggAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGAt       >  1:9464938/1‑93 (MQ=255)
                                                                                  ggAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGAt       <  2:5584716/93‑1 (MQ=255)
                                                                                    aaCACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATaa     >  1:9823098/1‑93 (MQ=255)
                                                                                     acacCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAAc    >  2:7281206/1‑93 (MQ=255)
                                                                                      cacCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACg   <  2:8876856/93‑1 (MQ=255)
                                                                                      cacCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACg   <  1:2112464/93‑1 (MQ=255)
                                                                                       acCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACgg  >  1:8791589/1‑93 (MQ=255)
                                                                                       acCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACgg  <  2:8033685/93‑1 (MQ=255)
                                                                                          |                                                                                         
CTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCAGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACGG  >  NC_000913/3433965‑3434144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 236 total aligned reads displayed.
CACCTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCAGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACGGGTCG  >  NC_000913/3433962‑3434148
                                                                                             |                                                                                             
CACCTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCG                                                                                               >  SRR4302540.9113888/1‑94 (MQ=60)
 CCCTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGG                                                                                              <  SRR4302540.3797096/94‑1 (MQ=60)
 ACCTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGG                                                                                              >  SRR4302540.1848437/1‑94 (MQ=60)
 ACCTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGG                                                                                              >  SRR4302540.4999120/1‑94 (MQ=60)
 ACCTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGG                                                                                              >  SRR4302540.4412762/1‑94 (MQ=60)
  CCTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGA                                                                                             <  SRR4302540.524247/94‑1 (MQ=60)
  CCTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGA                                                                                             <  SRR4302540.4044709/94‑1 (MQ=60)
   CTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAG                                                                                            <  SRR4302540.5824026/94‑1 (MQ=60)
   CTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAG                                                                                            <  SRR4302540.9074487/94‑1 (MQ=60)
   CTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAG                                                                                            <  SRR4302540.929929/94‑1 (MQ=60)
    TGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGC                                                                                           >  SRR4302540.9485310/1‑94 (MQ=60)
    TGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGC                                                                                           >  SRR4302540.6322694/1‑94 (MQ=60)
    TGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGC                                                                                           >  SRR4302540.1485951/1‑94 (MQ=60)
    TGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGC                                                                                           >  SRR4302540.118038/1‑94 (MQ=60)
     GTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGGA                                                                                          >  SRR4302540.1873373/1‑94 (MQ=60)
     GTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCA                                                                                          >  SRR4302540.2702930/1‑94 (MQ=60)
     GTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCA                                                                                          >  SRR4302540.2661371/1‑94 (MQ=60)
       TCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAAC                                                                                        <  SRR4302540.66409/94‑1 (MQ=60)
        CGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACC                                                                                       <  SRR4302540.7337313/94‑1 (MQ=60)
        CGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACC                                                                                       <  SRR4302540.2786170/94‑1 (MQ=60)
         GGTGTTACCGGAAGAGAATCGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCG                                                                                      >  SRR4302540.397894/1‑94 (MQ=60)
         GGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCG                                                                                      >  SRR4302540.397895/1‑94 (MQ=60)
         GGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCG                                                                                      >  SRR4302540.1055833/1‑94 (MQ=60)
           TGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGG                                                                                    <  SRR4302540.5951443/94‑1 (MQ=60)
           TGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGG                                                                                    <  SRR4302540.4838105/94‑1 (MQ=60)
            GTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGT                                                                                   <  SRR4302540.3068819/94‑1 (MQ=60)
            GTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGT                                                                                   <  SRR4302540.4521732/94‑1 (MQ=60)
              TACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAA                                                                                 <  SRR4302540.558291/94‑1 (MQ=60)
                CCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAAC                                                                               >  SRR4302540.10006266/1‑94 (MQ=60)
                CCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAAC                                                                               <  SRR4302540.1604185/94‑1 (MQ=60)
                 CGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACA                                                                              <  SRR4302540.1982696/94‑1 (MQ=60)
                 CGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACA                                                                              >  SRR4302540.7326648/1‑94 (MQ=60)
                  GGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAA                                                                             <  SRR4302540.9759256/94‑1 (MQ=60)
                  GGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAA                                                                             >  SRR4302540.4923853/1‑94 (MQ=60)
                  GGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAA                                                                             >  SRR4302540.4037207/1‑94 (MQ=60)
                  GGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAA                                                                             <  SRR4302540.159308/94‑1 (MQ=60)
                    AAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAA                                                                           >  SRR4302540.1785710/1‑94 (MQ=60)
                    AAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAA                                                                           <  SRR4302540.8337132/94‑1 (MQ=60)
                    AAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAA                                                                           <  SRR4302540.1975001/94‑1 (MQ=60)
                      GAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATC                                                                         >  SRR4302540.4438182/1‑94 (MQ=60)
                       AGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCT                                                                        <  SRR4302540.5374742/94‑1 (MQ=60)
                       AGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCT                                                                        >  SRR4302540.620808/1‑94 (MQ=60)
                        GAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTA                                                                       >  SRR4302540.8671209/1‑94 (MQ=60)
                        GAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTA                                                                       >  SRR4302540.2475289/1‑94 (MQ=60)
                        GAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTA                                                                       <  SRR4302540.5236671/94‑1 (MQ=60)
                        GAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTA                                                                       >  SRR4302540.1639164/1‑94 (MQ=60)
                        GAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACAACGGAGCAACCGGGTAAACAAAATCTA                                                                       >  SRR4302540.211809/1‑94 (MQ=60)
                         AATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTAC                                                                      <  SRR4302540.10046651/94‑1 (MQ=60)
                         AATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTAC                                                                      >  SRR4302540.6509935/1‑94 (MQ=60)
                         AATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTAC                                                                      <  SRR4302540.8064122/94‑1 (MQ=60)
                          ATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACC                                                                     >  SRR4302540.6408296/1‑94 (MQ=60)
                          ATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACC                                                                     <  SRR4302540.850055/94‑1 (MQ=60)
                          ATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACC                                                                     >  SRR4302540.2511911/1‑94 (MQ=60)
                          ATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACC                                                                     <  SRR4302540.952005/94‑1 (MQ=60)
                          ATAGCCTGCAGATTAAAGCCGTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACC                                                                     <  SRR4302540.4283295/94‑1 (MQ=60)
                           TAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCT                                                                    <  SRR4302540.7755007/94‑1 (MQ=60)
                           TAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCT                                                                    <  SRR4302540.7755006/94‑1 (MQ=60)
                           TAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCT                                                                    <  SRR4302540.318695/94‑1 (MQ=60)
                            AGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTG                                                                   >  SRR4302540.8662648/1‑94 (MQ=60)
                            AGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTG                                                                   <  SRR4302540.4688950/94‑1 (MQ=60)
                             GCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGG                                                                  <  SRR4302540.2766129/94‑1 (MQ=60)
                             GCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGG                                                                  >  SRR4302540.1804539/1‑94 (MQ=60)
                              CCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGT                                                                 >  SRR4302540.7003847/1‑94 (MQ=60)
                              CCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGT                                                                 <  SRR4302540.2310288/94‑1 (MQ=60)
                               CTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTG                                                                >  SRR4302540.831830/1‑94 (MQ=60)
                               CTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTG                                                                >  SRR4302540.6985111/1‑94 (MQ=60)
                               CTCCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTG                                                                <  SRR4302540.8746985/94‑1 (MQ=60)
                                TGCAGATTAAATCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGC                                                               <  SRR4302540.3260921/94‑1 (MQ=60)
                                 GCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCC                                                              <  SRR4302540.432645/94‑1 (MQ=60)
                                  CAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCG                                                             >  SRR4302540.2501193/1‑94 (MQ=60)
                                   AGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGA                                                            >  SRR4302540.2894653/1‑94 (MQ=60)
                                     ATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGACCTTTGCGAAACAGGAACGCCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAG                                                          <  SRR4302540.2287128/94‑1 (MQ=60)
                                     ATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAG                                                          >  SRR4302540.7819698/1‑94 (MQ=60)
                                      TTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGA                                                         <  SRR4302540.5044296/94‑1 (MQ=60)
                                       TAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAG                                                        <  SRR4302540.9884862/94‑1 (MQ=60)
                                       TAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAG                                                        <  SRR4302540.2059620/94‑1 (MQ=60)
                                       TAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAG                                                        <  SRR4302540.5450545/94‑1 (MQ=60)
                                       TAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCAGAGCAACCGGTTAAACAAAATCTACCTGGTGCCGAAGAG                                                        <  SRR4302540.7159487/94‑1 (MQ=60)
                                        AAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGG                                                       >  SRR4302540.8864031/1‑94 (MQ=60)
                                        AAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGG                                                       >  SRR4302540.7032050/1‑94 (MQ=60)
                                        AAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGG                                                       <  SRR4302540.8419649/94‑1 (MQ=60)
                                        AAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGG                                                       <  SRR4302540.8362196/94‑1 (MQ=60)
                                        AAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGG                                                       >  SRR4302540.4733399/1‑94 (MQ=60)
                                         AAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGG                                                      <  SRR4302540.3824045/94‑1 (MQ=60)
                                          AGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGC                                                     <  SRR4302540.9197033/94‑1 (MQ=60)
                                          AGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGC                                                     >  SRR4302540.432267/1‑94 (MQ=60)
                                          AGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGC                                                     <  SRR4302540.8323084/94‑1 (MQ=60)
                                           ACCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCG                                                    <  SRR4302540.3595385/94‑1 (MQ=60)
                                             CTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGAC                                                  <  SRR4302540.2673949/94‑1 (MQ=60)
                                             CTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGAC                                                  >  SRR4302540.5943551/1‑94 (MQ=60)
                                             CTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGAC                                                  <  SRR4302540.7822057/94‑1 (MQ=60)
                                             CTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAAAAGGAACACCGGAGAACCGGGGGAAACAAATTCTACCTGGTGCCGAAGAGGGagag                                                  >  SRR4302540.2509941/1‑90 (MQ=60)
                                              TTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACG                                                 <  SRR4302540.8777062/94‑1 (MQ=60)
                                              TTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACG                                                 >  SRR4302540.2434929/1‑94 (MQ=60)
                                               TTTTGTAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGG                                                <  SRR4302540.9965988/94‑1 (MQ=60)
                                               TTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGG                                                <  SRR4302540.8013995/94‑1 (MQ=60)
                                               TTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGG                                                <  SRR4302540.4509525/94‑1 (MQ=60)
                                                TTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGC                                               <  SRR4302540.332487/94‑1 (MQ=60)
                                                   GCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTC                                            <  SRR4302540.7527372/94‑1 (MQ=60)
                                                    gaagggACCGCTGAGGCCGAACTTTGCCAACGAGGAACACCGGAGCAACCGGGTAAACAAAATCTCCCTGGTGCCGAAGAGGGCGACGGCTTCT                                           <  SRR4302540.3594316/88‑1 (MQ=60)
                                                    CAACGTACCGCTGATGCCGAACTTTGCGAAACAGGACCACCGAAGCAACCAGGAAAACAAAAACTACCTGTTGCCGAAGgggggggcggcttgt                                           >  SRR4302540.8377204/1‑79 (MQ=49)
                                                    CAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCT                                           >  SRR4302540.1375016/1‑94 (MQ=60)
                                                    CAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCT                                           >  SRR4302540.2557396/1‑94 (MQ=60)
                                                     AACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTT                                          >  SRR4302540.647303/1‑94 (MQ=60)
                                                     AACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTT                                          <  SRR4302540.2685363/94‑1 (MQ=60)
                                                     AACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTT                                          >  SRR4302540.7246788/1‑94 (MQ=60)
                                                     AACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTT                                          >  SRR4302540.2243297/1‑94 (MQ=60)
                                                      ACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTT                                         <  SRR4302540.4326189/94‑1 (MQ=60)
                                                       CGTCCCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGTGTAAACAAAATCTACCTGGTGTCGAAGAGGGCGACGGCTTCTTTT                                        <  SRR4302540.6101481/94‑1 (MQ=60)
                                                       CGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTT                                        <  SRR4302540.6116330/94‑1 (MQ=60)
                                                       CGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTT                                        <  SRR4302540.37382/94‑1 (MQ=60)
                                                       CGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTT                                        >  SRR4302540.8960475/1‑94 (MQ=60)
                                                        GTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTA                                       >  SRR4302540.5031874/1‑94 (MQ=60)
                                                        GTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTA                                       >  SRR4302540.3789811/1‑94 (MQ=60)
                                                        GTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTA                                       >  SRR4302540.8277551/1‑94 (MQ=60)
                                                        GTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTA                                       >  SRR4302540.1690036/1‑94 (MQ=60)
                                                        GTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTA                                       >  SRR4302540.9760409/1‑94 (MQ=60)
                                                         gaccaCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTAC                                      <  SRR4302540.3514934/89‑1 (MQ=60)
                                                         TACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTAC                                      <  SRR4302540.9971207/94‑1 (MQ=60)
                                                         TACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTAC                                      <  SRR4302540.4101012/94‑1 (MQ=60)
                                                          ACCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACG                                     >  SRR4302540.1712615/1‑94 (MQ=60)
                                                           CCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGC                                    >  SRR4302540.8768652/1‑94 (MQ=60)
                                                           CCGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGC                                    <  SRR4302540.5593935/94‑1 (MQ=60)
                                                            CGCTGATGCCGAACTTTGCGAAGCAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCT                                   <  SRR4302540.394165/94‑1 (MQ=60)
                                                            CGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCT                                   <  SRR4302540.5608876/94‑1 (MQ=60)
                                                            CGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCT                                   <  SRR4302540.6474351/94‑1 (MQ=60)
                                                            CGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCT                                   <  SRR4302540.2606181/94‑1 (MQ=60)
                                                            CGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCT                                   >  SRR4302540.6628484/1‑94 (MQ=60)
                                                            CGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCT                                   <  SRR4302540.3487262/94‑1 (MQ=60)
                                                            CGCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCT                                   >  SRR4302540.3805410/1‑94 (MQ=60)
                                                             GCTGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTA                                  <  SRR4302540.8923324/94‑1 (MQ=60)
                                                               TGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAG                                <  SRR4302540.4650515/94‑1 (MQ=60)
                                                               TGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAG                                <  SRR4302540.7685214/94‑1 (MQ=60)
                                                               TGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAG                                >  SRR4302540.7243988/1‑94 (MQ=60)
                                                               TGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAG                                <  SRR4302540.7685215/94‑1 (MQ=60)
                                                               TGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAG                                <  SRR4302540.2467949/94‑1 (MQ=60)
                                                               TGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAG                                >  SRR4302540.879725/1‑94 (MQ=60)
                                                               TGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAG                                >  SRR4302540.4923568/1‑94 (MQ=60)
                                                               TGATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAG                                >  SRR4302540.9898233/1‑94 (MQ=60)
                                                                GATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGC                               <  SRR4302540.7827928/94‑1 (MQ=60)
                                                                 ATGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCT                              >  SRR4302540.2119805/1‑94 (MQ=60)
                                                                  TGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTA                             <  SRR4302540.1407522/94‑1 (MQ=60)
                                                                  TGCCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTA                             >  SRR4302540.7355204/1‑94 (MQ=60)
                                                                    CCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAAT                           <  SRR4302540.5663965/94‑1 (MQ=60)
                                                                    CCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAAT                           <  SRR4302540.6505115/94‑1 (MQ=60)
                                                                    CCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAAT                           <  SRR4302540.8583320/94‑1 (MQ=60)
                                                                    CCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAAT                           >  SRR4302540.8169269/1‑94 (MQ=60)
                                                                    CCGAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAAT                           <  SRR4302540.3443490/94‑1 (MQ=60)
                                                                      GAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCA                         >  SRR4302540.10054809/1‑94 (MQ=60)
                                                                      GAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCA                         >  SRR4302540.9612900/1‑94 (MQ=60)
                                                                      GAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCA                         >  SRR4302540.2455202/1‑94 (MQ=60)
                                                                      GAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCA                         >  SRR4302540.5233403/1‑94 (MQ=60)
                                                                      GAACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCA                         <  SRR4302540.1717714/94‑1 (MQ=60)
                                                                       AACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAA                        <  SRR4302540.2206490/94‑1 (MQ=60)
                                                                       AACTTGGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAA                        <  SRR4302540.2206489/94‑1 (MQ=60)
                                                                        ACTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAA                       <  SRR4302540.5464022/94‑1 (MQ=60)
                                                                         CTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAA                      >  SRR4302540.3753086/1‑94 (MQ=60)
                                                                         CTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAA                      >  SRR4302540.403914/1‑94 (MQ=60)
                                                                         CTTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAA                      >  SRR4302540.403915/1‑94 (MQ=60)
                                                                          TTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAA                     <  SRR4302540.1296651/94‑1 (MQ=60)
                                                                          TTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAA                     >  SRR4302540.8692734/1‑94 (MQ=60)
                                                                          TTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAA                     <  SRR4302540.4074243/94‑1 (MQ=60)
                                                                          TTTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAA                     <  SRR4302540.9458370/94‑1 (MQ=60)
                                                                           TTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAG                    <  SRR4302540.5553865/94‑1 (MQ=60)
                                                                           TTGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAG                    <  SRR4302540.9724837/94‑1 (MQ=60)
                                                                            TGCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGT                   >  SRR4302540.3151609/1‑94 (MQ=60)
                                                                             GCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTG                  <  SRR4302540.9389749/94‑1 (MQ=60)
                                                                             GCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTG                  <  SRR4302540.1517652/94‑1 (MQ=60)
                                                                             GCGAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTG                  <  SRR4302540.6999036/94‑1 (MQ=60)
                                                                               GAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGAT                <  SRR4302540.6461951/94‑1 (MQ=60)
                                                                               GAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGAT                >  SRR4302540.951280/1‑94 (MQ=60)
                                                                               GAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGAT                >  SRR4302540.600254/1‑94 (MQ=60)
                                                                               GAAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGAT                <  SRR4302540.1268579/94‑1 (MQ=60)
                                                                                AAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATG               <  SRR4302540.10033415/94‑1 (MQ=60)
                                                                                AAACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATG               <  SRR4302540.6686416/94‑1 (MQ=60)
                                                                                 AACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGA              <  SRR4302540.1775954/94‑1 (MQ=60)
                                                                                 AACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGA              >  SRR4302540.3057908/1‑94 (MQ=60)
                                                                                 AACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGA              <  SRR4302540.9243423/94‑1 (MQ=60)
                                                                                  ACAGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAG             <  SRR4302540.2928610/94‑1 (MQ=60)
                                                                                    AGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGAT           >  SRR4302540.9577225/1‑94 (MQ=60)
                                                                                    AGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGAT           >  SRR4302540.1441408/1‑94 (MQ=60)
                                                                                    AGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGAT           >  SRR4302540.8100872/1‑94 (MQ=60)
                                                                                    AGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGAT           >  SRR4302540.758887/1‑94 (MQ=60)
                                                                                    AGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGAT           <  SRR4302540.1655035/94‑1 (MQ=60)
                                                                                    AGGAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGAT           <  SRR4302540.6972205/94‑1 (MQ=60)
                                                                                      GAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAA         >  SRR4302540.3060229/1‑94 (MQ=60)
                                                                                      GAACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAA         >  SRR4302540.9938018/1‑94 (MQ=60)
                                                                                       AACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAAC        <  SRR4302540.2984828/94‑1 (MQ=60)
                                                                                        ACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACG       <  SRR4302540.4522192/94‑1 (MQ=60)
                                                                                        ACACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACG       >  SRR4302540.9102739/1‑94 (MQ=60)
                                                                                         CACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACGG      >  SRR4302540.8893294/1‑94 (MQ=60)
                                                                                         CACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACGG      <  SRR4302540.9498330/94‑1 (MQ=60)
                                                                                         CACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACGG      <  SRR4302540.2135135/94‑1 (MQ=60)
                                                                                          ACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACGGG     >  SRR4302540.258874/1‑94 (MQ=60)
                                                                                          ACCGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACGGG     <  SRR4302540.6658770/94‑1 (MQ=60)
                                                                                            CGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACGGGTC   <  SRR4302540.2896329/94‑1 (MQ=60)
                                                                                            CGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACGGGTC   <  SRR4302540.8599149/94‑1 (MQ=60)
                                                                                            CGGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACGGGTC   >  SRR4302540.6333482/1‑94 (MQ=60)
                                                                                             GGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACGGGTCG  <  SRR4302540.3403445/94‑1 (MQ=60)
                                                                                             GGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACGGGTCG  <  SRR4302540.6793173/94‑1 (MQ=60)
                                                                                             |                                                                                             
CACCTGTTCGGTGTTACCGGAAGAGAATAGCCTGCAGATTAAAGCCTTTTTGCAACGTACCGCTGATGCCGAACTTTGCGAAACAGGAACACCAGAGCAACCGGGTAAACAAAATCTACCTGGTGCCGAAGAGGGCGACGGCTTCTTTTACGCTAAGCTAATCAAAAAGTGATGAGATAACGGGTCG  >  NC_000913/3433962‑3434148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑