Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,544,971	T→C	G259G (GGT→GGC)	gntT →	gluconate permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,544,971	0	T	C	99.7%	1051.2 / ‑5.0	332	G259G (GGT→GGC)	gntT	gluconate permease
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (159/172); total (159/173)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.05e-01

Only 100 of 348 total aligned reads displayed.

GGTGCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGTGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGA  >  NC_000913/3544881‑3545060

  ggCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGAcc                                                                                       <  1:7739720/92‑1 (MQ=255)

   gCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGAccc                                                                                      <  2:441230/93‑1 (MQ=255)

   ccgggTAGTACTGATTGCGATGCTTGCGATTGCCGAAATGATCCTGCCAAACGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGAccc                                                                                      <  2:2111621/90‑1 (MQ=255)

       gcagtaCGGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTa                                                                                  <  1:7586971/91‑1 (MQ=255)

            tcTGATGGCGATGCGTGCGATTGCCAAAATGATCCTCCCGAAAGGTCACCCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGc                                                                             <  1:3397436/92‑1 (MQ=255)

             cTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCa                                                                            >  2:460997/1‑93 (MQ=255)

             cTGATGGCGATGCGTGCGATTGCCGAAATGATCCCGCCGAAAGGCCACGCTTTCCTGCCGGTAGCGGAGGTCCTCGGCGACCCGGTAATGGCa                                                                            >  2:3185283/1‑93 (MQ=255)

              tGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCaa                                                                           >  2:3616987/1‑93 (MQ=255)

              tGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACCCTTTCATGCCGGTAGCGGAGGTCCTCGGCGACCCGGTTATGGCaa                                                                           >  2:7734905/1‑93 (MQ=255)

              tGATGGCGATGCGTGCGATTGCAGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCaa                                                                           <  2:3884404/93‑1 (MQ=255)

              cgATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCaa                                                                           <  2:1088154/92‑1 (MQ=255)

                aTGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACg                                                                         >  1:647279/1‑93 (MQ=255)

                aTGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACg                                                                         <  2:4822932/93‑1 (MQ=255)

                 tGGCGATGCGTGCGATTGCCGGAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGc                                                                        >  2:9605994/1‑93 (MQ=255)

                 tGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGc                                                                        <  1:7112993/93‑1 (MQ=255)

                 tGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGc                                                                        >  2:1321000/1‑93 (MQ=255)

                     gATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGAt                                                                    <  1:4446730/93‑1 (MQ=255)

                     gATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGAt                                                                    <  1:3653904/93‑1 (MQ=255)

                      aTGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCCCGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACACGGTAATGGCAACGCTGGtt                                                                   >  2:6630456/1‑93 (MQ=255)

                      aTGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGAtt                                                                   >  2:5810840/1‑93 (MQ=255)

                        gcgtgcgATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGc                                                                 >  1:1142235/1‑93 (MQ=255)

                        gcgtgcgATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGc                                                                 <  1:3977219/93‑1 (MQ=255)

                         cgtgcgATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGcc                                                                <  2:287491/93‑1 (MQ=255)

                           ggcgATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGt                                                              <  2:9358101/92‑1 (MQ=255)

                              gATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCt                                                           >  2:634322/1‑93 (MQ=255)

                              gATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGACGTGCt                                                           >  1:2314405/1‑93 (MQ=255)

                                ttGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGa                                                         <  2:8186845/93‑1 (MQ=255)

                                ttGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGa                                                         >  1:9019786/1‑93 (MQ=255)

                                ttGCCGAAATGATCCTGCCGAAAGGACACGCTTTCCTGAAGCTAGCGGAGATCCTCAGCGACCCGGTAATGGCAACGCTCATTGCCGAGCTGa                                                         >  2:8637404/1‑93 (MQ=255)

                                 tGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGAt                                                        >  2:1602129/1‑93 (MQ=255)

                                  gCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGAtt                                                       >  1:1624771/1‑93 (MQ=255)

                                     gAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGTCAACGCTGATTGCCGCTCTGATTGCg                                                    >  2:8992812/1‑93 (MQ=255)

                                      aaaTGATCCTGCCGCAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGa                                                   <  1:8936105/93‑1 (MQ=255)

                                      aaaTGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGa                                                   <  1:9234448/93‑1 (MQ=255)

                                      aaaTGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGa                                                   <  2:3229647/93‑1 (MQ=255)

                                       aaTGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGAt                                                  <  2:9850699/93‑1 (MQ=255)

                                       aaTGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGAt                                                  >  1:5718403/1‑93 (MQ=255)

                                         tGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGt                                                >  1:916617/1‑93 (MQ=255)

                                          gATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGtt                                               <  1:5178499/93‑1 (MQ=255)

                                             ccTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCAc                                            <  2:4189885/93‑1 (MQ=255)

                                             ccTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCAc                                            >  2:7425562/1‑93 (MQ=255)

                                               tGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCt                                          >  1:5934754/1‑93 (MQ=255)

                                                 ccGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCttt                                        <  1:1563949/93‑1 (MQ=255)

                                                  caaaaGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTg                                       <  2:5455816/91‑1 (MQ=255)

                                                  cGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTg                                       <  1:13083/93‑1 (MQ=255)

                                                   gAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTgg                                      >  1:1865385/1‑93 (MQ=255)

                                                    aaaGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGt                                     >  2:3488985/1‑93 (MQ=255)

                                                     aaGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTc                                    <  1:5341445/93‑1 (MQ=255)

                                                     aaGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTc                                    <  1:953240/93‑1 (MQ=255)

                                                     aaGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTc                                    >  2:2252808/1‑93 (MQ=255)

                                                     aaGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTc                                    <  1:9858297/93‑1 (MQ=255)

                                                     aaGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTc                                    <  1:5087519/93‑1 (MQ=255)

                                                       ggTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTa                                  >  2:5359102/1‑93 (MQ=255)

                                                        gTCGCGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTaa                                 <  1:3028666/93‑1 (MQ=255)

                                                        gTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTaa                                 >  2:1878933/1‑93 (MQ=255)

                                                        gTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTaa                                 >  2:8444453/1‑93 (MQ=255)

                                                         tCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTaaa                                >  1:2757852/1‑93 (MQ=255)

                                                           aCGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAAcc                              >  1:7182916/1‑93 (MQ=255)

                                                           aCGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAAcc                              >  1:6917607/1‑93 (MQ=255)

                                                           aCGCTTTCCTGCCGGTAGCGGAGGTCCTCGGCGACCCGGTAATGGCAACGCTGCTTGCCCTGCTGATTGCGATGTTCACCTTTGGTCTACAcc                              >  1:4686432/1‑93 (MQ=255)

                                                            cGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCg                             >  2:6971087/1‑93 (MQ=255)

                                                             gCTGTCCTGCGGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGt                            <  1:4198312/93‑1 (MQ=255)

                                                             ccTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGCTTGCGATGTTCACCTTTGGTCTAAACCGt                            <  2:6216251/92‑1 (MQ=255)

                                                               tttCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTgt                          >  2:8338840/1‑92 (MQ=255)

                                                               tttCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTgg                          <  1:2228928/93‑1 (MQ=255)

                                                               tttCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTgg                          >  1:6209487/1‑93 (MQ=255)

                                                               tttCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTgg                          <  1:8358647/93‑1 (MQ=255)

                                                                tgccTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGt                         <  1:9737058/91‑1 (MQ=255)

                                                                 tgcTGGCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGCCAACGCGGAGTGCCGTGTTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTc                        <  1:8631760/91‑1 (MQ=255)

                                                                 tCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTc                        <  1:7435727/93‑1 (MQ=255)

                                                                 tCCTGCCGGTAGCGGAGCTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAGCCGTGGTc                        >  1:8789153/1‑93 (MQ=255)

                                                                    tGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGtt                     <  2:5724054/93‑1 (MQ=255)

                                                                    cgCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGtt                     <  2:3003067/92‑1 (MQ=255)

                                                                     gCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTc                    <  1:7792481/93‑1 (MQ=255)

                                                                       cGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCaa                  <  1:1074083/93‑1 (MQ=255)

                                                                        ggTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAAt                 <  1:8468042/93‑1 (MQ=255)

                                                                         gTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATg                <  2:7978357/93‑1 (MQ=255)

                                                                         gTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATg                >  2:575473/1‑93 (MQ=255)

                                                                          tAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATgg               <  2:5178484/93‑1 (MQ=255)

                                                                          tAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATgg               <  2:4009647/93‑1 (MQ=255)

                                                                           aGCGTAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGa              <  2:6496637/93‑1 (MQ=255)

                                                                           aGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGa              <  1:2483317/93‑1 (MQ=255)

                                                                            gCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGAt             <  1:7372091/93‑1 (MQ=255)

                                                                            gCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGAt             >  2:4120855/1‑93 (MQ=255)

                                                                            gCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGAt             >  1:7014440/1‑93 (MQ=255)

                                                                             cGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATc            <  2:3710358/93‑1 (MQ=255)

                                                                             cGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATc            >  1:5844387/1‑93 (MQ=255)

                                                                               gAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAg          >  2:3166568/1‑93 (MQ=255)

                                                                               gAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAg          <  1:5560741/93‑1 (MQ=255)

                                                                               gAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAg          >  2:2040961/1‑93 (MQ=255)

                                                                                aGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGa         <  2:9751052/93‑1 (MQ=255)

                                                                                 gTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGAt        >  2:9497453/1‑93 (MQ=255)

                                                                                  ttCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGAtt       <  1:7272689/93‑1 (MQ=255)

                                                                                    ccTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTaa     >  1:4653819/1‑93 (MQ=255)

                                                                                    ccTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTaa     >  1:9413521/1‑93 (MQ=255)

                                                                                      tCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACg   <  1:3777288/93‑1 (MQ=255)

                                                                                      tCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACg   >  1:8069140/1‑93 (MQ=255)

                                                                                      ccGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACg   <  2:2400259/92‑1 (MQ=255)

                                                                                       cGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGa  <  1:4380796/93‑1 (MQ=255)

                                                                                       cGGCGACCCGGTAATGGCAACCCTGATTGCCGTTCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGa  <  1:3350789/93‑1 (MQ=255)

GGTGCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGTGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGA  >  NC_000913/3544881‑3545060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TCTGGTGCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGTGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGACACG  >  NC_000913/3544878‑3545064

TTTGGTGGCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGC                                                                                               <  SRR4302540.2713825/94‑1 (MQ=60)

TCTGGTGCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGC                                                                                               <  SRR4302540.8152049/94‑1 (MQ=60)

TCTGGTGCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGC                                                                                               <  SRR4302540.3959012/94‑1 (MQ=60)

TCTGGTGCCGCTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGC                                                                                               <  SRR4302540.616937/94‑1 (MQ=60)

   GGTGCCGGTCGTGGTGATGGCGATGCGTGCGATTGCCGAACTGACCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGAC                                                                                            <  SRR4302540.4076315/94‑1 (MQ=60)

   GGTGCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGAC                                                                                            <  SRR4302540.9085631/94‑1 (MQ=60)

    GTGCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACC                                                                                           >  SRR4302540.8012923/1‑94 (MQ=60)

     TGCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCC                                                                                          >  SRR4302540.5883927/1‑94 (MQ=60)

     TGCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCC                                                                                          <  SRR4302540.703474/94‑1 (MQ=60)

     TGCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCC                                                                                          <  SRR4302540.3959856/94‑1 (MQ=60)

     GGCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCC                                                                                          <  SRR4302540.7830081/94‑1 (MQ=60)

         GGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTA                                                                                      >  SRR4302540.7237252/1‑94 (MQ=60)

         GGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTA                                                                                      >  SRR4302540.8430140/1‑94 (MQ=60)

         GGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTA                                                                                      >  SRR4302540.9942905/1‑94 (MQ=60)

          GTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAA                                                                                     <  SRR4302540.929276/94‑1 (MQ=60)

          GTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAA                                                                                     >  SRR4302540.1118659/1‑94 (MQ=60)

          GCAGTACGGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAA                                                                                     <  SRR4302540.7672171/94‑1 (MQ=60)

           TAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAAT                                                                                    <  SRR4302540.4707234/94‑1 (MQ=60)

           TAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAAT                                                                                    <  SRR4302540.3385630/94‑1 (MQ=60)

           TAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAAT                                                                                    <  SRR4302540.8782704/94‑1 (MQ=60)

           TAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAAT                                                                                    <  SRR4302540.8524170/94‑1 (MQ=60)

           TAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAAG                                                                                    >  SRR4302540.8704662/1‑94 (MQ=60)

           TAGTACTGAGGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAAT                                                                                    <  SRR4302540.5501666/94‑1 (MQ=60)

           TAGTACTCATGCAGATGAGTGGGATTGCCGAAATGATCCTGCCGAAAGGTCCCGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAAT                                                                                    <  SRR4302540.8524169/94‑1 (MQ=60)

             GTCCTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGG                                                                                  <  SRR4302540.5315477/94‑1 (MQ=60)

             GTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGG                                                                                  >  SRR4302540.4725064/1‑94 (MQ=60)

             GTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGG                                                                                  >  SRR4302540.8628638/1‑94 (MQ=60)

             GTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGG                                                                                  >  SRR4302540.1519228/1‑94 (MQ=60)

              TACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGC                                                                                 >  SRR4302540.2870328/1‑94 (MQ=60)

               TCTGATGGCGATGCGTGCGATTGCCAAAATGATCCTCCCGAAAGGTCACCCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCA                                                                                <  SRR4302540.3434486/94‑1 (MQ=60)

               ACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGTGACCCGGTAATGGCA                                                                                <  SRR4302540.2151903/94‑1 (MQ=60)

                CTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAA                                                                               <  SRR4302540.3817212/94‑1 (MQ=60)

                 TGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAAC                                                                              >  SRR4302540.8251517/1‑94 (MQ=60)

                 TGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAAC                                                                              >  SRR4302540.3650389/1‑94 (MQ=60)

                 TGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAAC                                                                              <  SRR4302540.5613034/94‑1 (MQ=60)

                  GATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACG                                                                             >  SRR4302540.654173/1‑94 (MQ=60)

                  GATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACG                                                                             >  SRR4302540.8922916/1‑94 (MQ=60)

                   ATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGC                                                                            >  SRR4302540.92921/1‑94 (MQ=60)

                   ATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGC                                                                            >  SRR4302540.10017937/1‑94 (MQ=60)

                    TGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCT                                                                           <  SRR4302540.7192169/94‑1 (MQ=60)

                       ggtggcgtaCGATTGCCAAAATGACCCTGCCGAAAGGTCCCGCTTCCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGAT                                                                        <  SRR4302540.2274467/85‑1 (MQ=60)

                       GGATGCGTGCGATTGCGGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGAT                                                                        <  SRR4302540.9092675/94‑1 (MQ=60)

                        GATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATT                                                                       <  SRR4302540.6253389/94‑1 (MQ=60)

                        GATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATT                                                                       <  SRR4302540.1632243/94‑1 (MQ=60)

                        GATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATT                                                                       >  SRR4302540.8522951/1‑94 (MQ=60)

                        GATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATT                                                                       <  SRR4302540.4494924/94‑1 (MQ=60)

                        GATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATT                                                                       <  SRR4302540.6500637/94‑1 (MQ=60)

                        GATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATT                                                                       <  SRR4302540.3693924/94‑1 (MQ=60)

                        GATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGAAACGCTGATT                                                                       >  SRR4302540.5358545/1‑94 (MQ=60)

                         ATGCGGGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGAGCCGGTAATGGCAACGCTGATTG                                                                      <  SRR4302540.1864456/94‑1 (MQ=60)

                          TGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGC                                                                     >  SRR4302540.1154173/1‑94 (MQ=60)

                           GCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCC                                                                    <  SRR4302540.4020067/94‑1 (MQ=60)

                           GCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCC                                                                    >  SRR4302540.5179361/1‑94 (MQ=60)

                            CGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCG                                                                   >  SRR4302540.1760601/1‑94 (MQ=60)

                             GTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGT                                                                  >  SRR4302540.5812557/1‑94 (MQ=60)

                             GTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGT                                                                  >  SRR4302540.6688651/1‑94 (MQ=60)

                             GTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCATCGGCGACCCGGTAATGGCAACGCTGATTGCCGG                                                                  >  SRR4302540.3414987/1‑94 (MQ=60)

                               GCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGC                                                                >  SRR4302540.7967378/1‑94 (MQ=60)

                               GCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGC                                                                >  SRR4302540.5336042/1‑94 (MQ=60)

                                CGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCT                                                               >  SRR4302540.1301435/1‑94 (MQ=60)

                                CGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGACGTGCT                                                               >  SRR4302540.2339321/1‑94 (MQ=60)

                                 GATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTG                                                              >  SRR4302540.604475/1‑94 (MQ=60)

                                 GATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTG                                                              <  SRR4302540.741807/94‑1 (MQ=60)

                                  ATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGT                                                             >  SRR4302540.7596979/1‑94 (MQ=60)

                                  ATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGA                                                             >  SRR4302540.1683759/1‑94 (MQ=60)

                                  ATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGA                                                             <  SRR4302540.1525727/94‑1 (MQ=60)

                                  ATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGA                                                             >  SRR4302540.9128017/1‑94 (MQ=60)

                                   TTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGAT                                                            <  SRR4302540.1133102/94‑1 (MQ=60)

                                   TTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGAT                                                            <  SRR4302540.9776873/94‑1 (MQ=60)

                                    TGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATT                                                           >  SRR4302540.1642567/1‑94 (MQ=60)

                                     GCCGAAAGGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTG                                                          <  SRR4302540.7054263/94‑1 (MQ=60)

                                       CGAAATGATCCTGCCGAAAGTTCACGCTTGCCTGCCGTTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCG                                                        <  SRR4302540.7319763/94‑1 (MQ=60)

                                       CGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCG                                                        >  SRR4302540.7237266/1‑94 (MQ=60)

                                        GAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGA                                                       >  SRR4302540.7779751/1‑94 (MQ=60)

                                        GAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGA                                                       >  SRR4302540.4381129/1‑94 (MQ=60)

                                        GAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGA                                                       >  SRR4302540.8926408/1‑94 (MQ=60)

                                        GAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGA                                                       >  SRR4302540.2518810/1‑94 (MQ=60)

                                        GAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGA                                                       >  SRR4302540.3428064/1‑94 (MQ=60)

                                         AAATGATCCTGCCGCAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGAT                                                      <  SRR4302540.9040709/94‑1 (MQ=60)

                                         AAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGAT                                                      <  SRR4302540.2397865/94‑1 (MQ=60)

                                         AAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGAT                                                      >  SRR4302540.5781344/1‑94 (MQ=60)

                                         AAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGAT                                                      <  SRR4302540.9345103/94‑1 (MQ=60)

                                          AATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATG                                                     >  SRR4302540.9645118/1‑94 (MQ=60)

                                           ATTATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGT                                                    <  SRR4302540.4873232/94‑1 (MQ=60)

                                           ATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGT                                                    >  SRR4302540.926297/1‑94 (MQ=60)

                                           ATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGAAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGAGATGT                                                    >  SRR4302540.1891818/1‑94 (MQ=60)

                                           ATGATCCTGCCGAAAGGTCACGCTTGCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGT                                                    <  SRR4302540.3066733/94‑1 (MQ=60)

                                            TGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTT                                                   >  SRR4302540.46106/1‑94 (MQ=60)

                                            TGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTT                                                   >  SRR4302540.2234637/1‑94 (MQ=60)

                                            TGACCCTGCCGAAAGGTCCCGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTT                                                   <  SRR4302540.7264237/94‑1 (MQ=60)

                                             GATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTC                                                  <  SRR4302540.4397345/94‑1 (MQ=60)

                                             GATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTC                                                  <  SRR4302540.5234859/94‑1 (MQ=60)

                                              ATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTTCCGTGCTGATTGCGATGTTCA                                                 <  SRR4302540.656008/94‑1 (MQ=60)

                                               TCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCAC                                                <  SRR4302540.3651547/94‑1 (MQ=60)

                                               TCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCAC                                                <  SRR4302540.746234/94‑1 (MQ=60)

                                               TCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCAC                                                <  SRR4302540.2952144/94‑1 (MQ=60)

                                                CCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACT                                               >  SRR4302540.7294563/1‑94 (MQ=60)

                                                 CTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCT                                              >  SRR4302540.9055244/1‑94 (MQ=60)

                                                 CTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCT                                              >  SRR4302540.6000350/1‑94 (MQ=60)

                                                    CCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTG                                           <  SRR4302540.1581116/94‑1 (MQ=60)

                                                     cgcaacggacccgttcccttctGGTAGCGCAGGTCCTCGGCGGCCCGGTAACGGCAACGCTGATTACCGTGCTGATTGCGATGTTCACCTTTGG                                          <  SRR4302540.13226/72‑1 (MQ=48)

                                                     CGAAAGGTTACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGG                                          <  SRR4302540.2764923/94‑1 (MQ=60)

                                                     CGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGG                                          >  SRR4302540.9937376/1‑94 (MQ=60)

                                                     CGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGG                                          >  SRR4302540.1885832/1‑94 (MQ=60)

                                                     CGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGG                                          <  SRR4302540.13225/94‑1 (MQ=60)

                                                       AAAGGGCACGGTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTC                                        <  SRR4302540.7173887/94‑1 (MQ=60)

                                                        AAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCT                                       <  SRR4302540.9973495/94‑1 (MQ=60)

                                                        AAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCT                                       >  SRR4302540.4683460/1‑94 (MQ=60)

                                                        AAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCT                                       <  SRR4302540.5400025/94‑1 (MQ=60)

                                                        AAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCT                                       >  SRR4302540.924561/1‑94 (MQ=60)

                                                        AAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCT                                       >  SRR4302540.563610/1‑94 (MQ=60)

                                                        AAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCT                                       <  SRR4302540.5142528/94‑1 (MQ=60)

                                                        AAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCT                                       <  SRR4302540.9595584/94‑1 (MQ=60)

                                                        AAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCT                                       <  SRR4302540.963133/94‑1 (MQ=60)

                                                         AGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTA                                      >  SRR4302540.1619208/1‑94 (MQ=60)

                                                         AGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTA                                      >  SRR4302540.7772878/1‑94 (MQ=60)

                                                         AGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTA                                      >  SRR4302540.6322430/1‑94 (MQ=60)

                                                         AGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTA                                      >  SRR4302540.76743/1‑94 (MQ=60)

                                                         AGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTA                                      >  SRR4302540.2357329/1‑94 (MQ=60)

                                                           GTCGCGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAA                                    <  SRR4302540.3061931/94‑1 (MQ=60)

                                                           GTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCCCCTTTTGTCTAAC                                    >  SRR4302540.1454955/1‑94 (MQ=60)

                                                           GTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAA                                    >  SRR4302540.5924534/1‑94 (MQ=60)

                                                           GTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAA                                    >  SRR4302540.2787650/1‑94 (MQ=60)

                                                           GTCACGCTTTCCTGCCGGGAGCGGTGTTCCTCGGCGACCCGGTAATGGCAACGCGGATTGCCGTACTGATTTCGATGTTCACCCTTGGTCTAAC                                    >  SRR4302540.5022697/1‑94 (MQ=60)

                                                            TCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAAC                                   <  SRR4302540.4990065/94‑1 (MQ=60)

                                                             CACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACC                                  <  SRR4302540.998624/94‑1 (MQ=60)

                                                             CACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACC                                  >  SRR4302540.7262994/1‑94 (MQ=60)

                                                             CACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACC                                  >  SRR4302540.6994583/1‑94 (MQ=60)

                                                             CACGCTTTCCTGCCGGTAGCGGAGGTCCTCGGCGACCCGGTAATGGCAACGCTGCTTGCCCTGCTGATTGCGATGTTCACCTTTGGTCTACACC                                  >  SRR4302540.4736553/1‑94 (MQ=60)

                                                               CGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGT                                <  SRR4302540.518308/94‑1 (MQ=60)

                                                               CGCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGT                                <  SRR4302540.3901646/94‑1 (MQ=60)

                                                                GCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTACACCGTG                               >  SRR4302540.4442245/1‑94 (MQ=60)

                                                                GCTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTG                               >  SRR4302540.1232208/1‑94 (MQ=60)

                                                                GCTGTCCTGCGGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTG                               <  SRR4302540.4243990/94‑1 (MQ=60)

                                                                GCTCTCCTGCCGTGAGCGGAGTTCCTCGGCGACCCGGTAAGGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTG                               <  SRR4302540.602670/94‑1 (MQ=60)

                                                                 CTTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGG                              >  SRR4302540.6278591/1‑94 (MQ=60)

                                                                  TTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGT                             <  SRR4302540.8455645/94‑1 (MQ=60)

                                                                  TTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGT                             >  SRR4302540.8000767/1‑94 (MQ=60)

                                                                  TTTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGT                             <  SRR4302540.2252935/94‑1 (MQ=60)

                                                                   TTCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTC                            >  SRR4302540.7516753/1‑94 (MQ=60)

                                                                   TTCCTGCCGGTAGCGGAGCTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAGCCGTGGTC                            >  SRR4302540.8890848/1‑94 (MQ=60)

                                                                   TGCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTC                            <  SRR4302540.9851374/94‑1 (MQ=60)

                                                                   TCCCTGTCGGTAGCGTAGTTCCTCGGCGACCCCGTAATGGCAACTGTGATTGCCGTGCTGATTTCGATGTTCACCTTTGGTCTAAACCGTGGTC                            <  SRR4302540.6086163/94‑1 (MQ=60)

                                                                    TGCTGGCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGCCAACGCGGAGTGCCGTGTTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCG                           <  SRR4302540.8732024/94‑1 (MQ=60)

                                                                    TCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCG                           <  SRR4302540.7518576/94‑1 (MQ=60)

                                                                    TCCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCG                           <  SRR4302540.3652769/94‑1 (MQ=60)

                                                                    TCCTGCCGGGAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCG                           <  SRR4302540.7833231/94‑1 (MQ=60)

                                                                     CCTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGT                          >  SRR4302540.9592338/1‑94 (MQ=60)

                                                                      CTGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTT                         >  SRR4302540.915657/1‑94 (MQ=60)

                                                                       TGCCGGTAGCGGAGTTCCTCGGCGACCCGGTAGTGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTC                        <  SRR4302540.5653605/94‑1 (MQ=60)

                                                                        GCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCA                       <  SRR4302540.7883571/94‑1 (MQ=60)

                                                                        GCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCA                       >  SRR4302540.7364836/1‑94 (MQ=60)

                                                                        GCCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCA                       <  SRR4302540.7883569/94‑1 (MQ=60)

                                                                         CCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAA                      >  SRR4302540.3820354/1‑94 (MQ=60)

                                                                         CCGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAA                      <  SRR4302540.4795963/94‑1 (MQ=60)

                                                                          CGGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAAT                     <  SRR4302540.1085051/94‑1 (MQ=60)

                                                                           GGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATG                    >  SRR4302540.2321351/1‑94 (MQ=60)

                                                                           GGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATG                    <  SRR4302540.8566366/94‑1 (MQ=60)

                                                                           GGTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATG                    <  SRR4302540.4097065/94‑1 (MQ=60)

                                                                            GTAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGG                   <  SRR4302540.979936/94‑1 (MQ=60)

                                                                             TAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGA                  <  SRR4302540.2746159/94‑1 (MQ=60)

                                                                             TAGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGA                  <  SRR4302540.8867634/94‑1 (MQ=60)

                                                                              AGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGAT                 >  SRR4302540.7092323/1‑94 (MQ=60)

                                                                              AGCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGAT                 <  SRR4302540.2510075/94‑1 (MQ=60)

                                                                               GCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATC                >  SRR4302540.5909031/1‑94 (MQ=60)

                                                                               GCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATC                <  SRR4302540.7454264/94‑1 (MQ=60)

                                                                               GCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATC                <  SRR4302540.4131056/94‑1 (MQ=60)

                                                                               GCGGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATC                <  SRR4302540.7115802/94‑1 (MQ=60)

                                                                                 GGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAG              <  SRR4302540.7113266/94‑1 (MQ=60)

                                                                                 GGAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAG              <  SRR4302540.4433933/94‑1 (MQ=60)

                                                                                  GAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGA             >  SRR4302540.6000104/1‑94 (MQ=60)

                                                                                  GAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGA             <  SRR4302540.5621981/94‑1 (MQ=60)

                                                                                  GAGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGA             <  SRR4302540.7505821/94‑1 (MQ=60)

                                                                                   AGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGAT            <  SRR4302540.9330287/94‑1 (MQ=60)

                                                                                   AGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGAT            >  SRR4302540.6888224/1‑94 (MQ=60)

                                                                                   AGTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGAT            <  SRR4302540.2327629/94‑1 (MQ=60)

                                                                                    GTTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATT           >  SRR4302540.5674692/1‑94 (MQ=60)

                                                                                     TTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTA          <  SRR4302540.7353844/94‑1 (MQ=60)

                                                                                     TTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTA          >  SRR4302540.4394937/1‑94 (MQ=60)

                                                                                     TTCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTA          <  SRR4302540.872660/94‑1 (MQ=60)

                                                                                      TCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAA         >  SRR4302540.7593792/1‑94 (MQ=60)

                                                                                      TCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAA         >  SRR4302540.9525442/1‑94 (MQ=60)

                                                                                      TCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAA         >  SRR4302540.4703620/1‑94 (MQ=60)

                                                                                      TCCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTATGGTCTAAACCGGGGTCGTTCAATGGATCGGATTAC         >  SRR4302540.9525440/1‑94 (MQ=60)

                                                                                       CCTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAAC        <  SRR4302540.4552973/94‑1 (MQ=60)

                                                                                        CTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACG       >  SRR4302540.8162767/1‑94 (MQ=60)

                                                                                        CTCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACG       <  SRR4302540.940412/94‑1 (MQ=60)

                                                                                         TCGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGA      <  SRR4302540.3818495/94‑1 (MQ=60)

                                                                                          CGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGAC     <  SRR4302540.3735958/94‑1 (MQ=60)

                                                                                          CGGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGAC     <  SRR4302540.4428361/94‑1 (MQ=60)

                                                                                          CGGCGACCCGGTAATGGCAACCCTGATTGCCGTTCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGAC     <  SRR4302540.3387524/94‑1 (MQ=60)

                                                                                           GGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTCAACCGTGGTCGTTCAATGGATCAGATTAACGACC    >  SRR4302540.9153093/1‑94 (MQ=60)

                                                                                           GGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGACA    <  SRR4302540.943522/94‑1 (MQ=60)

                                                                                           GGCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGACA    <  SRR4302540.3574419/94‑1 (MQ=60)

                                                                                            GCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGACAC   <  SRR4302540.4586419/94‑1 (MQ=60)

                                                                                            GCGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGACAC   <  SRR4302540.7269341/94‑1 (MQ=60)

                                                                                             CGACCCGGTAAAGGCAACGGTTATTGCCGTGCGGATTGCGATGTTGCCCTTTGGTCTAAACCGTGGTCGTACAATGGATCAGATTAACGACACG  <  SRR4302540.3482462/94‑1 (MQ=60)

TCTGGTGCCGGTAGTACTGATGGCGATGCGTGCGATTGCCGAAATGATCCTGCCGAAAGGTCACGCTTTCCTGCCGGTAGCGGAGTTCCTCGGTGACCCGGTAATGGCAACGCTGATTGCCGTGCTGATTGCGATGTTCACCTTTGGTCTAAACCGTGGTCGTTCAATGGATCAGATTAACGACACG  >  NC_000913/3544878‑3545064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`