Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,566,875	A→G	R29R (CGT→CGC)	glgC ←	glucose‑1‑phosphate adenylyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,566,875	0	A	G	99.7%	953.3 / ‑5.1	309	R29R (CGT→CGC)	glgC	glucose‑1‑phosphate adenylyltransferase
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (218/90); total (219/90)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.39e-01

Only 100 of 398 total aligned reads displayed.

GACAGCGCAAAGTCGATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCACGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGAC  >  NC_000913/3566786‑3566964

    gcgcAAAGTCGATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTAGCGCGtcctc                                                                                    >  1:5514945/1‑93 (MQ=255)

    gcgcAAAGTCGATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGtcctc                                                                                    >  1:3382840/1‑93 (MQ=255)

    gcgcAAAGTCGATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGtcctc                                                                                    >  2:7658957/1‑93 (MQ=255)

     cgcAAAGTCGATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGtcctcc                                                                                   <  1:2460061/93‑1 (MQ=255)

       cAAAGTCGATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCg                                                                                 >  1:4687389/1‑93 (MQ=255)

       cAAAGTCGATAATGCGGAACTTACCACC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCg                                                                                 >  1:7983647/1‑93 (MQ=255)

        aaaGTCGATAATGCGGAACTTCCCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGc                                                                                <  2:3759634/93‑1 (MQ=255)

        aaaGTCGATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGc                                                                                >  1:5809168/1‑93 (MQ=255)

         aaGTCGATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGcc                                                                               >  2:7755082/1‑93 (MQ=255)

         aaGTCGATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGcc                                                                               >  2:1356409/1‑93 (MQ=255)

         aaGTCGATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGcc                                                                               <  1:1040927/93‑1 (MQ=255)

          aGTCGATAATGGGGACTTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTGCCGCGTCCTCCCGCCa                                                                              <  2:6178380/93‑1 (MQ=255)

           gTCGATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAg                                                                             >  2:1639821/1‑93 (MQ=255)

           gTCGATAAGGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAACCCTTCAGGCGGGTACCGCGTCCTCCCGCCAg                                                                             <  2:2274650/93‑1 (MQ=255)

            tCGATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGt                                                                            >  2:4635775/1‑93 (MQ=255)

            tCGATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGt                                                                            >  1:8401853/1‑93 (MQ=255)

             cGATATGGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTa                                                                           <  2:2589161/93‑1 (MQ=255)

              gATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTAt                                                                          >  2:5031843/1‑93 (MQ=255)

              gATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTAt                                                                          >  1:3899918/1‑93 (MQ=255)

                tAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCa                                                                        >  1:1002440/1‑93 (MQ=255)

                caaTGCGTACCTCACCGGC‑GAATTGGCCGGCCGTTTTTTCTCGCTTATTGGTTAATTCCTGCAGGCGGGTACCGCGTCCTCCCGCCAGTATCa                                                                        <  2:2897330/92‑1 (MQ=255)

                 aaTGCGGAACTTCCCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAg                                                                       <  2:5428679/93‑1 (MQ=255)

                  aTGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAgg                                                                      >  2:5243940/1‑93 (MQ=255)

                  aTGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAgg                                                                      >  2:870182/1‑93 (MQ=255)

                  aTGCGGAA‑TTTCCGCCGGAAGTGTCCGGCGGGTTTTGCTCGTTTATTGGTTAAATCTTGAGGGCGGGTACCGCGTCCTCCCGCCAGTATCAgg                                                                      <  2:63143/93‑1 (MQ=255)

                      ggACCTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCaa                                                                  <  2:5340811/93‑1 (MQ=255)

                      ggAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCaa                                                                  <  2:3127180/93‑1 (MQ=255)

                       gAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAAc                                                                 >  2:419543/1‑93 (MQ=255)

                       gAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGAACCGCGTACTCCCGCCAGTATCAGGTCAAc                                                                 >  2:2398208/1‑93 (MQ=255)

                         aCTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAg                                                               <  1:6231528/93‑1 (MQ=255)

                            tACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGAtt                                                            >  2:3838063/1‑93 (MQ=255)

                            tACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGAtt                                                            >  2:6500906/1‑93 (MQ=255)

                             cccgcc‑gAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGAttt                                                           <  1:2309085/92‑1 (MQ=255)

                              ccgcc‑gAGGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTCCCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTc                                                          <  1:9902951/93‑1 (MQ=255)

                              ccgcc‑gAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTc                                                          >  1:314570/1‑93 (MQ=255)

                               cgcc‑gAGGTTTACGGCCGTTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGTTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCa                                                         <  2:3963840/93‑1 (MQ=255)

                               cgcc‑gAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCa                                                         <  1:6899119/93‑1 (MQ=255)

                                gcc‑gAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCaa                                                        >  2:5650590/1‑93 (MQ=255)

                                gcc‑gAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCaa                                                        >  2:5481258/1‑93 (MQ=255)

                                gcc‑gAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCaa                                                        >  1:2862305/1‑93 (MQ=255)

                                 cc‑gAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAt                                                       >  2:2758233/1‑93 (MQ=255)

                                 cc‑gAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAt                                                       <  2:3443099/93‑1 (MQ=255)

                                    gAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATgg                                                     <  1:6796009/93‑1 (MQ=255)

                                    gAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCCTCCTCCCCCCAGTATCAGGGCAACAAATTTCATTgg                                                     >  2:8433313/1‑93 (MQ=255)

                                     aaGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGc                                                    >  1:4992778/1‑93 (MQ=255)

                                     aaGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGc                                                    >  1:2515710/1‑93 (MQ=255)

                                     aaGTGTACGGCCGGTTTTGCCCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGc                                                    <  1:5562038/93‑1 (MQ=255)

                                      aGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCa                                                   <  2:8525/93‑1 (MQ=255)

                                      aGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCa                                                   <  2:1426194/93‑1 (MQ=255)

                                       gtgtACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAg                                                  >  1:9602021/1‑93 (MQ=255)

                                        tgtACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGc                                                 >  1:6166742/1‑93 (MQ=255)

                                        tgtACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGc                                                 >  1:453064/1‑93 (MQ=255)

                                         gtACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCt                                                <  2:6749899/93‑1 (MQ=255)

                                          tACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTg                                               >  1:6379609/1‑93 (MQ=255)

                                           aCGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTgg                                              >  1:9556518/1‑93 (MQ=255)

                                              gCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGgtgc                                           >  2:4462585/1‑93 (MQ=255)

                                                 ggTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGcc                                        >  2:6830820/1‑93 (MQ=255)

                                                 ggTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGcc                                        >  1:1515913/1‑93 (MQ=255)

                                                 ggTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGGACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGcc                                        >  2:7352792/1‑93 (MQ=255)

                                                   ttttGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCaa                                      >  1:7096781/1‑93 (MQ=255)

                                                    tttGCTCGCTTATTGGTTAAATCCTTCAGGGGGGTACCGCGTACTCCCGCCAGTATCAGGGCAACAGCTTTCAATGGCAGCTTGTGCGCCaaa                                     >  2:9947065/1‑92 (MQ=255)

                                                     ttGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGACATCAATGGCAGCTGGCGCGCCAACa                                    >  2:3631723/1‑93 (MQ=255)

                                                     tcgCTCGCTTATTGGTAAAACCTTGCAGGCGGGTCCCGCTTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACa                                    <  2:978016/91‑1 (MQ=255)

                                                      tGCGCGCGTAGTGTTTAACTCTTTGAGGCGTCTACCGCCTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACAt                                   <  1:1753798/93‑1 (MQ=255)

                                                         tCGCTTATTGTTTAAATCCTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTaa                                <  2:1221648/93‑1 (MQ=255)

                                                         tCGCTTATTGGTTAAACCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTaa                                <  2:9305313/93‑1 (MQ=255)

                                                         ccGCTTATGGGTTAAACCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTaa                                <  1:2739478/92‑1 (MQ=255)

                                                          cGCTTATTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAg                               >  1:3755546/1‑93 (MQ=255)

                                                            cTTATTGTTAAAATCCTTCAGGCGGCTCCCGCGCCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTg                             <  2:7191121/93‑1 (MQ=255)

                                                             tttttGGTAAAATCCTTCAGGCGGGTCCCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGa                            <  2:8839878/90‑1 (MQ=255)

                                                               ataggTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGGTGGCGCGCCAACATTAAGTGATc                          >  1:749543/4‑93 (MQ=255)

                                                               aTTGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATc                          >  2:2461700/1‑93 (MQ=255)

                                                                 tGGTTAAATCCTTCAGGCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGt                        <  1:5251846/93‑1 (MQ=255)

                                                                 tGGTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGt                        >  1:833560/1‑93 (MQ=255)

                                                                  ggTTAAATCCTTCGGGCGGGTACCGCTCCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGtt                       <  1:7385473/93‑1 (MQ=255)

                                                                  ggTTAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGtt                       >  2:1971537/1‑93 (MQ=255)

                                                                    ttAAATCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGttct                     <  1:1760191/93‑1 (MQ=255)

                                                                       aaTCCTTCAGGGGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTtcttct                  <  2:5130405/93‑1 (MQ=255)

                                                                       aaTCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGttcttcc                  >  1:9761930/1‑92 (MQ=255)

                                                                       aaTCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTtcttct                  >  2:8103297/1‑93 (MQ=255)

                                                                        aTCCTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTtctc                 >  2:5942437/1‑93 (MQ=255)

                                                                          ccTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTa               >  1:8791719/1‑93 (MQ=255)

                                                                           cTTCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTaa              >  2:1845693/1‑93 (MQ=255)

                                                                            ttCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTaaa             >  1:7806893/1‑93 (MQ=255)

                                                                            tgcgggCGGGTACCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTaaa             <  2:1396841/89‑1 (MQ=255)

                                                                             tCAGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAAc            >  2:7990305/1‑93 (MQ=255)

                                                                               aGGGGGTTACCGCGCCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTa          <  1:4331878/93‑1 (MQ=255)

                                                                               aGGCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCGACATTAAGTGATCGTTCTTCTCTAAACTa          >  1:8233709/1‑93 (MQ=255)

                                                                               aGGCGGGCCCCGCGCCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTa          <  1:1910321/93‑1 (MQ=255)

                                                                                ggCGGGTCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTaa         <  1:1632988/93‑1 (MQ=255)

                                                                                ggCGGGTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTaa         >  2:337381/1‑93 (MQ=255)

                                                                                  gggttACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAAcc       <  1:7751343/89‑1 (MQ=255)

                                                                                  ggggTACCGCGCCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAAcc       <  2:1767076/92‑1 (MQ=255)

                                                                                   gggTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCa      >  1:6495982/1‑93 (MQ=255)

                                                                                   gggTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCa      >  2:3468957/1‑93 (MQ=255)

                                                                                    ggTACTGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCATCTGGCGCGCCAACATTAAGTGATCGGTCTTCTCTAAACTAACCAt     >  1:8944628/1‑93 (MQ=255)

                                                                                    ggTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAt     >  1:2001156/1‑93 (MQ=255)

                                                                                    ggTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAt     >  1:1303018/1‑93 (MQ=255)

                                                                                     gTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATg    >  2:9069364/1‑93 (MQ=255)

                                                                                      tACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGa   >  1:9239512/1‑93 (MQ=255)

GACAGCGCAAAGTCGATAATGCGGAACTTACCGCC‑GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGGTACCACGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGAC  >  NC_000913/3566786‑3566964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 209 total aligned reads displayed.

GTTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCACGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACTAAC  >  NC_000913/3566782‑3566968

GTTATACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCG                                                                                               >  SRR4302540.1131148/1‑94 (MQ=60)

GTTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCG                                                                                               <  SRR4302540.6025483/94‑1 (MQ=60)

GTTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCG                                                                                               <  SRR4302540.9437333/94‑1 (MQ=60)

GTTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCG                                                                                               <  SRR4302540.7348426/94‑1 (MQ=60)

GTTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCG                                                                                               >  SRR4302540.3260886/1‑94 (MQ=60)

GTTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTCCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCG                                                                                               >  SRR4302540.8099658/1‑94 (MQ=60)

 TTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCTGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGC                                                                                              >  SRR4302540.5090655/1‑94 (MQ=60)

 TTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGC                                                                                              >  SRR4302540.8223820/1‑94 (MQ=60)

     ACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCC                                                                                          <  SRR4302540.451339/94‑1 (MQ=60)

     ACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCC                                                                                          <  SRR4302540.8051256/94‑1 (MQ=60)

      CAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCT                                                                                         >  SRR4302540.1984048/1‑94 (MQ=60)

      CAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCT                                                                                         <  SRR4302540.6508466/94‑1 (MQ=60)

       AGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TAGCGCGTCCTC                                                                                        >  SRR4302540.5575690/1‑94 (MQ=60)

       AGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTC                                                                                        >  SRR4302540.3441407/1‑94 (MQ=60)

       AGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTC                                                                                        >  SRR4302540.3419764/1‑94 (MQ=60)

        GCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCC                                                                                       <  SRR4302540.9938325/94‑1 (MQ=60)

         CGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACGAAGTCCTCCC                                                                                      >  SRR4302540.7830861/1‑94 (MQ=60)

         CGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCC                                                                                      >  SRR4302540.1222272/1‑94 (MQ=60)

         CGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCC                                                                                      <  SRR4302540.2486538/94‑1 (MQ=60)

         CGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCC                                                                                      <  SRR4302540.2902815/94‑1 (MQ=60)

          GCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCG                                                                                     >  SRR4302540.2686227/1‑94 (MQ=60)

          GCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCG                                                                                     >  SRR4302540.4737519/1‑94 (MQ=60)

           CAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGC                                                                                    >  SRR4302540.5873372/1‑94 (MQ=60)

           CAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGC                                                                                    >  SRR4302540.4588807/1‑94 (MQ=60)

            AAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCC                                                                                   >  SRR4302540.3891643/1‑94 (MQ=60)

            AAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCC                                                                                   >  SRR4302540.3891644/1‑94 (MQ=60)

             AAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCA                                                                                  <  SRR4302540.1051510/94‑1 (MQ=60)

             AAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCA                                                                                  <  SRR4302540.1051511/94‑1 (MQ=60)

             AAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCA                                                                                  <  SRR4302540.2268711/94‑1 (MQ=60)

               GTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGT                                                                                >  SRR4302540.8499364/1‑94 (MQ=60)

               GTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGT                                                                                >  SRR4302540.8527012/1‑94 (MQ=60)

                TCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTA                                                                               >  SRR4302540.4121222/1‑94 (MQ=60)

                 CGATAATGCGGAACTTCCCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTAT                                                                              <  SRR4302540.6260323/94‑1 (MQ=60)

                 CGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTAT                                                                              <  SRR4302540.6260034/94‑1 (MQ=60)

                 CGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTAT                                                                              >  SRR4302540.3942236/1‑94 (MQ=60)

                   ATAATGCGGAACTTCCCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCA                                                                            <  SRR4302540.1243517/94‑1 (MQ=60)

                   ATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCA                                                                            <  SRR4302540.6034398/94‑1 (MQ=60)

                   ATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCA                                                                            >  SRR4302540.7258858/1‑94 (MQ=60)

                   ATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCA                                                                            >  SRR4302540.1012622/1‑94 (MQ=60)

                    TAATGGGGAACTTACCGCCGAAGTGTACGGCGGGTTTTGCTCGCTTATTGGTTAATTCCTGCAGGCGTG‑TACGGCGTCCTCCCGCCAGTATCAG                                                                           <  SRR4302540.5842126/94‑1 (MQ=60)

                    TAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAG                                                                           <  SRR4302540.8472822/94‑1 (MQ=60)

                     AATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGG                                                                          >  SRR4302540.8454862/1‑94 (MQ=60)

                     AATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGG                                                                          >  SRR4302540.5493880/1‑94 (MQ=60)

                     AATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGG                                                                          <  SRR4302540.10078222/94‑1 (MQ=60)

                     AATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGG                                                                          >  SRR4302540.1875769/1‑94 (MQ=60)

                      ATGCGGACCTTCCCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TCCCGCGTCCTCCCGCCAGTATCAGGG                                                                         <  SRR4302540.8008085/94‑1 (MQ=60)

                      ATGCGGAACGTACCGCGGAGGGGTACGGCCGTTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGG                                                                         <  SRR4302540.7033977/94‑1 (MQ=60)

                       TGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGC                                                                        >  SRR4302540.2367926/1‑94 (MQ=60)

                       TGCGGAACTTACCGCCGAAGTGTACGGCCGGTCTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCCGTATCAGGGC                                                                        >  SRR4302540.2367927/1‑94 (MQ=60)

                          GGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAAC                                                                     >  SRR4302540.1944096/1‑94 (MQ=60)

                          GGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAAC                                                                     >  SRR4302540.9934082/1‑94 (MQ=60)

                           GAACTTGCCGCCGAAGTGTACGCCCGGTTTTGCCCGCTTATTGGTTAAATCCTTCAGGCGGG‑TCCCGCGTCCTCCCGCCAGTATCAGGGCAACA                                                                    <  SRR4302540.1571980/94‑1 (MQ=60)

                           GAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACA                                                                    >  SRR4302540.3961651/1‑94 (MQ=60)

                            AACTTCCCGCCGAAGTGTACGCCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TCCCGCGTCCTCCCGCCAGTATCAGGGCAACAG                                                                   <  SRR4302540.3180891/94‑1 (MQ=60)

                            AACTTACCGCCGAAGTGTACGTCCGTTTTTGCCCGCTTATGGGTAAAATCCTTCAGGCGGG‑TACCGCGTCCCCCCGCCAGTATCAGGGCAACAG                                                                   <  SRR4302540.4527130/94‑1 (MQ=60)

                            AACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAG                                                                   >  SRR4302540.2498912/1‑94 (MQ=60)

                            AACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAG                                                                   >  SRR4302540.5829029/1‑94 (MQ=60)

                            AACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAG                                                                   >  SRR4302540.1774838/1‑94 (MQ=60)

                            AACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAG                                                                   >  SRR4302540.2498911/1‑94 (MQ=60)

                             actgcCCGCCGAAGTGTACGGCTGTTTTTCCTCGCTTGTGGGTTAAATCCTTCAGGCGGG‑TACCGCGCCCTCCCGCCAGTATCAGGGCAACAGA                                                                  <  SRR4302540.6974935/89‑1 (MQ=60)

                             ACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGA                                                                  <  SRR4302540.6300834/94‑1 (MQ=60)

                             ACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGA                                                                  >  SRR4302540.9503770/1‑94 (MQ=60)

                             ACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGA                                                                  >  SRR4302540.643073/1‑94 (MQ=60)

                              CTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGAT                                                                 >  SRR4302540.9569500/1‑94 (MQ=60)

                               TTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATT                                                                <  SRR4302540.2849545/94‑1 (MQ=60)

                               TTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATT                                                                <  SRR4302540.6936267/94‑1 (MQ=60)

                                TCCCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTT                                                               <  SRR4302540.7243471/94‑1 (MQ=60)

                                TCCCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTT                                                               <  SRR4302540.1333660/94‑1 (MQ=60)

                                TACCGCGGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTT                                                               <  SRR4302540.1148204/94‑1 (MQ=60)

                                TACCGCCGAAGTGTGCGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTT                                                               <  SRR4302540.755615/94‑1 (MQ=60)

                                 CCCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTC                                                              <  SRR4302540.2333943/94‑1 (MQ=60)

                                 ACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTC                                                              >  SRR4302540.317704/1‑94 (MQ=60)

                                  CCGCCGAGGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TCCCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCA                                                             <  SRR4302540.10018653/94‑1 (MQ=60)

                                  CCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCA                                                             <  SRR4302540.8273995/94‑1 (MQ=60)

                                   CGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAA                                                            >  SRR4302540.1813704/1‑94 (MQ=60)

                                   CGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAA                                                            >  SRR4302540.2893339/1‑94 (MQ=60)

                                   CGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAA                                                            <  SRR4302540.6975743/94‑1 (MQ=60)

                                    GCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGTGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAT                                                           <  SRR4302540.8342146/94‑1 (MQ=60)

                                    GCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAT                                                           >  SRR4302540.6358767/1‑94 (MQ=60)

                                    CCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAT                                                           <  SRR4302540.8342147/94‑1 (MQ=60)

                                    CCCGAAGTGTACGGCCGGTTTTGCTCGCTTATGGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAAT                                                           <  SRR4302540.6053751/94‑1 (MQ=60)

                                     CCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATG                                                          >  SRR4302540.7477125/1‑94 (MQ=60)

                                     CCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATG                                                          >  SRR4302540.8851475/1‑94 (MQ=60)

                                     CCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑GACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATG                                                          >  SRR4302540.1493626/1‑94 (MQ=60)

                                      aaagttgtcCGGCCGGTTTTGCTCGCTTATTGATTAAACCCTAGAGGGGGC‑TACCGCGCCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGG                                                         <  SRR4302540.5860463/85‑1 (MQ=37)

                                      CGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGG                                                         >  SRR4302540.6817852/1‑94 (MQ=60)

                                      CGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TAACGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGG                                                         >  SRR4302540.3820580/1‑94 (MQ=60)

                                       GAAGTGTCCGGCGGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGC                                                        <  SRR4302540.7365812/94‑1 (MQ=60)

                                       GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGC                                                        >  SRR4302540.9696671/1‑94 (MQ=60)

                                       GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGC                                                        >  SRR4302540.5046832/1‑94 (MQ=60)

                                       GAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGC                                                        <  SRR4302540.6871175/94‑1 (MQ=60)

                                        aaggtttccgccgtttttcCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TCCCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCA                                                       <  SRR4302540.7927886/75‑1 (MQ=60)

                                        AAGTGTCCGGCCGGTTTTCCCCGCTTATTGGTTAAATCCTTCAGGCGGG‑TCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCA                                                       <  SRR4302540.5623287/94‑1 (MQ=60)

                                        AAGTGTACGGCCGTTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGC‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCA                                                       <  SRR4302540.9026207/94‑1 (MQ=60)

                                        AAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCA                                                       >  SRR4302540.7847848/1‑94 (MQ=60)

                                        AAGTGTACGGCCGGTTTTGCCCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCA                                                       <  SRR4302540.5623288/94‑1 (MQ=60)

                                         AGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAG                                                      >  SRR4302540.9715291/1‑94 (MQ=60)

                                         AGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAG                                                      <  SRR4302540.2706342/94‑1 (MQ=60)

                                         AGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAG                                                      >  SRR4302540.9715290/1‑94 (MQ=60)

                                         AGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAG                                                      >  SRR4302540.9715289/1‑94 (MQ=60)

                                         AGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAG                                                      >  SRR4302540.3408327/1‑94 (MQ=60)

                                         AGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAG                                                      <  SRR4302540.3662996/94‑1 (MQ=60)

                                          GTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGC                                                     >  SRR4302540.6235453/1‑94 (MQ=60)

                                          GTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGC                                                     >  SRR4302540.457900/1‑94 (MQ=60)

                                          GTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGC                                                     >  SRR4302540.8370271/1‑94 (MQ=60)

                                          GTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGC                                                     >  SRR4302540.4918457/1‑94 (MQ=60)

                                          GTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGC                                                     >  SRR4302540.5038728/1‑94 (MQ=60)

                                            GTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTG                                                   >  SRR4302540.6994284/1‑94 (MQ=60)

                                            GTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTG                                                   >  SRR4302540.6450632/1‑94 (MQ=60)

                                             TACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGG                                                  >  SRR4302540.9669527/1‑94 (MQ=60)

                                             TACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGG                                                  >  SRR4302540.9669526/1‑94 (MQ=60)

                                               CGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCG                                                >  SRR4302540.177416/1‑94 (MQ=60)

                                                GGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGC                                               >  SRR4302540.7175827/1‑94 (MQ=60)

                                                GGCCGGTTTTGCTCGCTTATTGGTTAAATCCTGCAGGCGGG‑TCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGC                                               <  SRR4302540.2202980/94‑1 (MQ=60)

                                                   CGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCC                                            >  SRR4302540.1532680/1‑94 (MQ=60)

                                                   CGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTCGCGCGCC                                            >  SRR4302540.4976039/1‑94 (MQ=60)

                                                    GGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCA                                           >  SRR4302540.4615608/1‑94 (MQ=60)

                                                     GTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAA                                          >  SRR4302540.7795126/1‑94 (MQ=60)

                                                     GTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAA                                          >  SRR4302540.5584634/1‑94 (MQ=60)

                                                     GTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAA                                          >  SRR4302540.267429/1‑94 (MQ=60)

                                                      TTTTGCTCGTTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAAC                                         <  SRR4302540.9728489/94‑1 (MQ=60)

                                                      TTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAAC                                         <  SRR4302540.1073597/94‑1 (MQ=60)

                                                       TTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACA                                        >  SRR4302540.2804306/1‑94 (MQ=60)

                                                       TTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACA                                        >  SRR4302540.7142064/1‑94 (MQ=60)

                                                        tttcccccttatgtGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACAT                                       <  SRR4302540.1610072/80‑1 (MQ=60)

                                                        TTGCTCGTTTATTGTTAAAATCCTTCAGGCGGG‑TCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACAT                                       <  SRR4302540.5600311/94‑1 (MQ=60)

                                                        TTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACAT                                       >  SRR4302540.4602034/1‑94 (MQ=60)

                                                        TTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACAT                                       <  SRR4302540.9111444/94‑1 (MQ=60)

                                                        TTGCTCCGTTTTTGGTTAAACCCTTCGGGCGGG‑TCCCGCGCCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACAT                                       <  SRR4302540.8273867/94‑1 (MQ=60)

                                                        TGGCTCGCTTATTGTTTAAATCCTTCAGGCGGG‑TCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACAT                                       <  SRR4302540.8959976/94‑1 (MQ=60)

                                                         TGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATT                                      <  SRR4302540.1772804/94‑1 (MQ=60)

                                                         TGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATT                                      >  SRR4302540.8571791/1‑94 (MQ=60)

                                                         TGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATT                                      >  SRR4302540.7050021/1‑94 (MQ=60)

                                                          tctcctttttgGGTTAAATCCTTCAGGGCGG‑TCCCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTA                                     <  SRR4302540.2604206/83‑1 (MQ=60)

                                                           CTCGCTTATTGTTTAATTCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAA                                    <  SRR4302540.3010384/94‑1 (MQ=60)

                                                            TCGTTTATTGGTTAAATCCTTAAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAG                                   <  SRR4302540.9328862/94‑1 (MQ=60)

                                                            TCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAG                                   >  SRR4302540.3796517/1‑94 (MQ=60)

                                                            CCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCGCGCCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAG                                   <  SRR4302540.6442037/94‑1 (MQ=60)

                                                            CCGCTTATTGGTTAAACCCTTCAGGCGAG‑TACCGCGCCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAG                                   <  SRR4302540.10162692/94‑1 (MQ=60)

                                                            CCGCTTATGGGTTAAACCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAG                                   <  SRR4302540.2769053/94‑1 (MQ=60)

                                                             CGCTTATTGGTAAAATCCTTCAGGCGGG‑TCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGT                                  <  SRR4302540.2880419/94‑1 (MQ=60)

                                                               CTTATTGGTTAAATCCTTCAGGGGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGA                                >  SRR4302540.1811883/1‑94 (MQ=60)

                                                               CTTATTGGTTAAATCCTTCAGGCGGG‑TCCCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGA                                <  SRR4302540.8434550/94‑1 (MQ=60)

                                                                 TATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATC                              >  SRR4302540.6471936/1‑94 (MQ=60)

                                                                 TATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATC                              >  SRR4302540.9729894/1‑94 (MQ=60)

                                                                 TATTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATC                              <  SRR4302540.8026602/94‑1 (MQ=60)

                                                                 TATAGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGGTGGCGCGCCAACATTAAGTGATC                              >  SRR4302540.757523/1‑94 (MQ=60)

                                                                  tttgttaAAATCCTTCAGGGGGG‑TACCGCGTCCTGCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCG                             <  SRR4302540.8789801/87‑1 (MQ=60)

                                                                  ATTGGTTAAATCCTTCAGGCGGG‑GACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCG                             >  SRR4302540.5836617/1‑94 (MQ=60)

                                                                   TTGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGT                            >  SRR4302540.842411/1‑94 (MQ=60)

                                                                   TTGGTTAAATCCTTCAGGCGGG‑TACCACGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGT                            >  SRR4302540.1968524/1‑94 (MQ=60)

                                                                    TGGTTAAATCCTTCAGGCGGG‑TCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTT                           <  SRR4302540.5309132/94‑1 (MQ=60)

                                                                    TGGTTAAATCCTTCAGGCGGG‑TACCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTT                           <  SRR4302540.5308842/94‑1 (MQ=60)

                                                                     GGTTAAATCCTTCGGGCGGG‑TACCGCTCCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTC                          <  SRR4302540.7467758/94‑1 (MQ=60)

                                                                      GTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCT                         >  SRR4302540.5528136/1‑94 (MQ=60)

                                                                      GTTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCT                         >  SRR4302540.5293702/1‑94 (MQ=60)

                                                                       TTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTT                        <  SRR4302540.1779279/94‑1 (MQ=60)

                                                                       TTAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTT                        >  SRR4302540.1541271/1‑94 (MQ=60)

                                                                        TAAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTC                       <  SRR4302540.3394120/94‑1 (MQ=60)

                                                                         AAATCCTTCAGGCGGG‑TCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCT                      <  SRR4302540.7875843/94‑1 (MQ=60)

                                                                         AAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCT                      >  SRR4302540.9622924/1‑94 (MQ=60)

                                                                         AAATCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCC                      >  SRR4302540.9876428/1‑94 (MQ=60)

                                                                            TCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTA                   >  SRR4302540.456786/1‑94 (MQ=60)

                                                                            TCCTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTA                   >  SRR4302540.8893424/1‑94 (MQ=60)

                                                                             CCTTCGGGCGGG‑TCCCGCGTCCCCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAA                  <  SRR4302540.5480389/94‑1 (MQ=60)

                                                                              CTTCAGGCGGG‑TCCCGCGCCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAA                 <  SRR4302540.4318639/94‑1 (MQ=60)

                                                                              CTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAA                 >  SRR4302540.6588027/1‑94 (MQ=60)

                                                                              CTTCAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAA                 >  SRR4302540.7898122/1‑94 (MQ=60)

                                                                                TCAGGCGGG‑TCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACT               <  SRR4302540.8134201/94‑1 (MQ=60)

                                                                                 CAGGCGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCGACATTAAGTGATCGTTCTTCTCTAAACTA              >  SRR4302540.8329415/1‑94 (MQ=60)

                                                                                   GGCGGG‑TCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAAC            <  SRR4302540.1650855/94‑1 (MQ=60)

                                                                                   GGCGAG‑TACCGCGTCACCCCGCCAGTATCAGGGAAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAAC            <  SRR4302540.1650854/94‑1 (MQ=60)

                                                                                     GGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCA          <  SRR4302540.2960367/94‑1 (MQ=60)

                                                                                     CGGG‑TACCGCGTCTACCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCA          <  SRR4302540.6133911/94‑1 (MQ=60)

                                                                                     CGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCA          >  SRR4302540.6568217/1‑94 (MQ=60)

                                                                                     CGGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCA          >  SRR4302540.6568218/1‑94 (MQ=60)

                                                                                      GGGTTACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCA          <  SRR4302540.7841870/94‑1 (MQ=60)

                                                                                      GGG‑TACTGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCATCTGGCGCGCCAACATTAAGTGATCGGTCTTCTCTAAACTAACCAT         >  SRR4302540.9049791/1‑94 (MQ=60)

                                                                                      GGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAT         >  SRR4302540.2308689/1‑94 (MQ=60)

                                                                                      GGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAT         >  SRR4302540.2022825/1‑94 (MQ=60)

                                                                                      GGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAT         >  SRR4302540.1316537/1‑94 (MQ=60)

                                                                                      GGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAT         >  SRR4302540.9323274/1‑94 (MQ=60)

                                                                                      GGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAT         >  SRR4302540.7664430/1‑94 (MQ=60)

                                                                                      GGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAT         >  SRR4302540.7848025/1‑94 (MQ=60)

                                                                                      GGG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCAT         >  SRR4302540.5830634/1‑94 (MQ=60)

                                                                                       GG‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATTGTTCTTCTCTAAACTAACCATT        >  SRR4302540.1771076/1‑94 (MQ=60)

                                                                                       GG‑TACCGCGCCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATG        <  SRR4302540.1357269/94‑1 (MQ=60)

                                                                                        G‑TCCCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGA       <  SRR4302540.3108784/94‑1 (MQ=60)

                                                                                        G‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTCAACTAACCATGA       >  SRR4302540.1676613/1‑94 (MQ=60)

                                                                                        G‑TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGA       >  SRR4302540.9350191/1‑94 (MQ=60)

                                                                                          TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGAC      <  SRR4302540.2500781/94‑1 (MQ=60)

                                                                                          TACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGAC      >  SRR4302540.3220258/1‑94 (MQ=60)

                                                                                           ACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACT     >  SRR4302540.5721753/1‑94 (MQ=60)

                                                                                           ACCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACT     <  SRR4302540.6925951/94‑1 (MQ=60)

                                                                                            CCGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACTA    >  SRR4302540.10146232/1‑94 (MQ=60)

                                                                                             CGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACTAA   >  SRR4302540.4505221/1‑94 (MQ=60)

                                                                                             CGCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCACGACTAA   >  SRR4302540.9672787/1‑94 (MQ=60)

                                                                                              TCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACTAAC  >  SRR4302540.7302595/1‑94 (MQ=60)

                                                                                              GCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACTAAC  <  SRR4302540.9726814/94‑1 (MQ=60)

                                                                                              GCGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACTAAC  <  SRR4302540.8570744/94‑1 (MQ=60)

GTTAGACAGCGCAAAGTCGATAATGCGGAACTTACCGCCGAAGTGTACGGCCGGTTTTGCTCGCTTATTGGTTAAATCCTTCAGGCGGG‑TACCACGTCCTCCCGCCAGTATCAGGGCAACAGATTTCAATGGCAGCTGGCGCGCCAACATTAAGTGATCGTTCTTCTCTAAACTAACCATGACTAAC  >  NC_000913/3566782‑3566968

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`