Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,624,700 T→C I807V (ATT→GTT)  yhiH ← putative ATP‑binding component of a transport system, fragment 1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,624,7000TC99.5% 1349.0 / ‑3.9 424I807V (ATT→GTT) yhiHputative ATP‑binding component of a transport system, fragment 1
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (166/255);  total (168/256)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.26e-01

Only 100 of 435 total aligned reads displayed.

GCCCTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAATCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGAAAC  >  NC_000913/3624610‑3624789
                                                                                          |                                                                                         
gCCCTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCt                                                                                         <  2:7689526/93‑1 (MQ=255)
  ccTTCCAGTGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTgg                                                                                       <  1:1818641/93‑1 (MQ=255)
  ccTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTgg                                                                                       >  2:4824463/1‑93 (MQ=255)
   cTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGc                                                                                      >  1:2244592/1‑93 (MQ=255)
   cTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGc                                                                                      >  2:7468787/1‑93 (MQ=255)
    ttCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCt                                                                                     <  1:5490582/93‑1 (MQ=255)
      ccAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCttt                                                                                   >  2:1045910/1‑93 (MQ=255)
      ccAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCttt                                                                                   <  2:2762386/93‑1 (MQ=255)
       cAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCtttt                                                                                  >  1:413180/1‑93 (MQ=255)
       cAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCtttt                                                                                  >  1:3169980/1‑93 (MQ=255)
         gCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCa                                                                                >  2:534319/1‑93 (MQ=255)
          cGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCAt                                                                               <  2:8876899/93‑1 (MQ=255)
           gAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATa                                                                              <  2:37378/93‑1 (MQ=255)
            aaGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATaa                                                                             <  1:6574031/93‑1 (MQ=255)
            aaGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATaa                                                                             <  2:6517590/93‑1 (MQ=255)
            aaGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATaa                                                                             <  2:9045936/93‑1 (MQ=255)
            aaGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATaa                                                                             >  1:4771005/1‑93 (MQ=255)
             aGCTACCGGATCGATCATCCCGGAAAGCTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATaaa                                                                            <  1:806477/93‑1 (MQ=255)
             aGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATaaa                                                                            >  2:3298856/1‑93 (MQ=255)
              gCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAg                                                                           <  2:3090947/93‑1 (MQ=255)
               cTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAgg                                                                          <  1:516031/93‑1 (MQ=255)
                tACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAggg                                                                         >  1:6896077/1‑92 (MQ=255)
                tACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGt                                                                         <  1:7765744/93‑1 (MQ=255)
                 aCCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGTCGGCAACCTGGCTTTTCCTAAAGGTg                                                                        >  2:7396346/1‑93 (MQ=255)
                 aCCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCACCGTTCCGAAAATGGCGGCAACCTGGCTTTTTATAAAGGTg                                                                        <  2:729665/93‑1 (MQ=255)
                  ccGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTgg                                                                       >  2:6943462/1‑93 (MQ=255)
                  ccGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTgg                                                                       <  2:2444191/93‑1 (MQ=255)
                  ccGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTgg                                                                       >  1:8453394/1‑93 (MQ=255)
                   cGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGga                                                                      <  2:7150447/93‑1 (MQ=255)
                    ggATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGgag                                                                     >  1:6141445/1‑93 (MQ=255)
                     gatcgatcATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGgaga                                                                    >  1:6264358/1‑93 (MQ=255)
                     gatcgatcATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGgaga                                                                    >  1:945727/1‑93 (MQ=255)
                      atcgatcATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGAt                                                                   <  2:6772620/93‑1 (MQ=255)
                       tcgatcATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATc                                                                  <  1:3528847/93‑1 (MQ=255)
                       tcgatcATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATc                                                                  <  1:5688212/93‑1 (MQ=255)
                       tcgatcATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATc                                                                  <  2:9842418/93‑1 (MQ=255)
                       tcgatcATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGGGGAGATc                                                                  >  1:4851170/1‑93 (MQ=255)
                        cgatcATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATca                                                                 >  1:996581/1‑93 (MQ=255)
                         gatcATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATcag                                                                <  1:955789/93‑1 (MQ=255)
                          atcatcCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATcagc                                                               >  1:1320075/1‑93 (MQ=255)
                          atcatcCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATcagc                                                               <  1:4703501/93‑1 (MQ=255)
                          atcatcCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATcagc                                                               >  2:6105241/1‑93 (MQ=255)
                           tcatcCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATcagca                                                              <  1:6406445/93‑1 (MQ=255)
                           tcatcCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATcagca                                                              <  1:2718008/93‑1 (MQ=255)
                             atcCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCagcagc                                                            <  1:5066341/93‑1 (MQ=255)
                              tcCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATcagcaggc                                                           >  1:2802681/1‑91 (MQ=255)
                              tcCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGcc                                                           >  2:9393456/1‑93 (MQ=255)
                                 cGGAAAACTGTGTCGGCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCa                                                        <  1:2459750/93‑1 (MQ=255)
                                 cGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCa                                                        <  2:1385458/93‑1 (MQ=255)
                                  ggAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCAt                                                       <  2:9592297/93‑1 (MQ=255)
                                  ggAAAACTGTGTCGCCGGGATCAACGTGATAATCCCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCAt                                                       <  1:5761459/93‑1 (MQ=255)
                                     aaaCTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTcc                                                    <  2:4315068/93‑1 (MQ=255)
                                     aaaCTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTcc                                                    <  2:4016959/93‑1 (MQ=255)
                                     aaaCTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTcc                                                    <  2:6216585/93‑1 (MQ=255)
                                       aCTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCgg                                                  <  2:5722650/93‑1 (MQ=255)
                                       aCTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCgg                                                  <  1:8311816/93‑1 (MQ=255)
                                       aCTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGGGGAGATCAGCAGCCCCATTCCgg                                                  >  2:1154871/1‑93 (MQ=255)
                                       aCTCTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGCCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCgg                                                  <  1:1034580/93‑1 (MQ=255)
                                         tgtgTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTg                                                >  1:7879346/1‑93 (MQ=255)
                                          gtgtCGCTGGGATCAACGTGATAATCGCCGTTCCTAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTgg                                               <  2:8402333/93‑1 (MQ=255)
                                           tgtCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGc                                              <  2:178328/93‑1 (MQ=255)
                                           tgtCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGc                                              >  1:8146011/1‑93 (MQ=255)
                                            gtCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCa                                             <  2:7979585/93‑1 (MQ=255)
                                              cGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAat                                           >  1:9286228/1‑93 (MQ=255)
                                                 cGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAatgat                                        <  1:3236253/93‑1 (MQ=255)
                                                   ggATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCTCCATTCCGGTGGCAAtgatga                                      >  1:8678473/1‑93 (MQ=255)
                                                    gaacAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATgatgat                                     <  1:7258670/90‑1 (MQ=255)
                                                    gATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATgatgat                                     >  1:4595121/1‑93 (MQ=255)
                                                     aTCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGata                                    <  2:8595203/93‑1 (MQ=255)
                                                        aaCGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATAc                                 <  2:1292259/93‑1 (MQ=255)
                                                        aaCGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATAc                                 <  2:160092/93‑1 (MQ=255)
                                                        aaCGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATAc                                 <  1:3687948/93‑1 (MQ=255)
                                                         aCGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATAca                                >  2:3973677/1‑93 (MQ=255)
                                                         aCGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATAca                                <  1:7635698/93‑1 (MQ=255)
                                                          cGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATAcag                               >  2:4563540/1‑93 (MQ=255)
                                                           gTGATAATCGCCGTTCCGAAAATGGCGGCAATCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTACGGTGGCAATGATGATATAcagc                              >  2:7234179/1‑93 (MQ=255)
                                                           gTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAACGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATAcagc                              <  2:6003466/93‑1 (MQ=255)
                                                           gTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATAcagc                              <  2:6354548/93‑1 (MQ=255)
                                                           gTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATAcagc                              <  1:2558988/93‑1 (MQ=255)
                                                            tGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATAcagca                             <  1:7030879/93‑1 (MQ=255)
                                                            tGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATAcagca                             <  1:7505470/93‑1 (MQ=255)
                                                             gATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATAcagcag                            >  1:1985543/1‑93 (MQ=255)
                                                               tAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAgcg                          >  1:9154042/1‑93 (MQ=255)
                                                                  tCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGcgccg                       <  2:7593490/93‑1 (MQ=255)
                                                                    gCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCgccgcc                     <  1:890502/93‑1 (MQ=255)
                                                                    gCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCgccgcc                     <  2:2060109/93‑1 (MQ=255)
                                                                     ccGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCa                    <  2:7825606/93‑1 (MQ=255)
                                                                       gTTCCGAAAATGGCGGCAACCTGGCTTTTCTTAAAGGTGGAGATCAGCAGGCCCATTCCGGTGGCAATGATGATATACAGCACAGTCGCCAgg                  >  2:345638/1‑93 (MQ=255)
                                                                           cGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGa              <  1:1223795/93‑1 (MQ=255)
                                                                            gAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAg             >  1:1640353/1‑93 (MQ=255)
                                                                            gAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAg             <  2:3652346/93‑1 (MQ=255)
                                                                              aaaTGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCg           >  2:7028460/1‑93 (MQ=255)
                                                                               aaTGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGt          >  2:8124598/1‑93 (MQ=255)
                                                                               aaTGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCAATCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGt          >  1:7418588/1‑93 (MQ=255)
                                                                                aTGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTc         >  1:2911815/1‑93 (MQ=255)
                                                                                 tGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCa        >  2:3901696/1‑93 (MQ=255)
                                                                                 tGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCa        >  2:2926864/1‑93 (MQ=255)
                                                                                     ggcAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGaa    >  2:5515204/1‑93 (MQ=255)
                                                                                      gcAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGaaa   <  1:3082443/93‑1 (MQ=255)
                                                                                       cAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGAAAc  <  1:437852/93‑1 (MQ=255)
                                                                                          |                                                                                         
GCCCTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAATCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGAAAC  >  NC_000913/3624610‑3624789

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 232 total aligned reads displayed.
CAGGCCCTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAATCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGAAACTGCC  >  NC_000913/3624607‑3624793
                                                                                             |                                                                                             
CAGGCCCTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAAC                                                                                               <  SRR4302540.5888353/94‑1 (MQ=60)
CAGGCCCTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAAC                                                                                               >  SRR4302540.8725330/1‑94 (MQ=60)
CAGGCCCTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAAC                                                                                               >  SRR4302540.3319959/1‑94 (MQ=60)
 AGGCCCTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACC                                                                                              <  SRR4302540.1161959/94‑1 (MQ=60)
  GGCCCTTCCAGTGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCT                                                                                             <  SRR4302540.6027899/94‑1 (MQ=60)
   GCCCTTTCCGCGAAGCTACCGGATCGAACATCCCGGAAATCTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTG                                                                                            <  SRR4302540.3469419/94‑1 (MQ=60)
   GCCCTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTG                                                                                            <  SRR4302540.2335425/94‑1 (MQ=60)
   GCCCTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTG                                                                                            <  SRR4302540.3469418/94‑1 (MQ=60)
   GCCCTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTG                                                                                            <  SRR4302540.2113719/94‑1 (MQ=60)
    CCCTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGG                                                                                           <  SRR4302540.2833967/94‑1 (MQ=60)
    CCCTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGG                                                                                           <  SRR4302540.1072133/94‑1 (MQ=60)
     CCTTCCAGTGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGC                                                                                          <  SRR4302540.1838512/94‑1 (MQ=60)
      CTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCT                                                                                         >  SRR4302540.4730760/1‑94 (MQ=60)
      CTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCT                                                                                         >  SRR4302540.7062182/1‑94 (MQ=60)
      CTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCT                                                                                         >  SRR4302540.8169198/1‑94 (MQ=60)
      CTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCT                                                                                         >  SRR4302540.1262576/1‑94 (MQ=60)
      CTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGCGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCT                                                                                         >  SRR4302540.1722134/1‑94 (MQ=60)
       TTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTT                                                                                        <  SRR4302540.8875114/94‑1 (MQ=60)
        TCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTT                                                                                       >  SRR4302540.1620690/1‑94 (MQ=60)
        TCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTT                                                                                       <  SRR4302540.3608422/94‑1 (MQ=60)
        TCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTT                                                                                       <  SRR4302540.4964925/94‑1 (MQ=60)
         CCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTT                                                                                      >  SRR4302540.417510/1‑94 (MQ=60)
         CCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTT                                                                                      >  SRR4302540.3204442/1‑94 (MQ=60)
          CAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTC                                                                                     >  SRR4302540.3098431/1‑94 (MQ=60)
           AGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCA                                                                                    <  SRR4302540.4785473/94‑1 (MQ=60)
           AGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCA                                                                                    <  SRR4302540.4845415/94‑1 (MQ=60)
            GCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCAT                                                                                   >  SRR4302540.7071888/1‑94 (MQ=60)
            GCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCAT                                                                                   <  SRR4302540.4435704/94‑1 (MQ=60)
             CGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATA                                                                                  <  SRR4302540.1785808/94‑1 (MQ=60)
             CGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGAGTTTCATA                                                                                  >  SRR4302540.5236775/1‑94 (MQ=60)
             CGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATAAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGATTTTCATA                                                                                  >  SRR4302540.2892707/1‑94 (MQ=60)
              GAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAA                                                                                 <  SRR4302540.801659/94‑1 (MQ=60)
              GAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAA                                                                                 >  SRR4302540.4821970/1‑94 (MQ=60)
               AAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAA                                                                                <  SRR4302540.5534834/94‑1 (MQ=60)
               AAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAA                                                                                <  SRR4302540.7216035/94‑1 (MQ=60)
                AGCTACCGGATCGATCATCCCGGAAAGCTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAG                                                                               <  SRR4302540.815046/94‑1 (MQ=60)
                AGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAG                                                                               <  SRR4302540.4749077/94‑1 (MQ=60)
                 GCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGG                                                                              >  SRR4302540.9868939/1‑94 (MQ=60)
                  CTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGT                                                                             <  SRR4302540.521565/94‑1 (MQ=60)
                  CTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGT                                                                             >  SRR4302540.9553233/1‑94 (MQ=60)
                  CTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGT                                                                             <  SRR4302540.5153385/94‑1 (MQ=60)
                  CTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGG                                                                             >  SRR4302540.6972614/1‑94 (MQ=60)
                   TACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTG                                                                            <  SRR4302540.7856529/94‑1 (MQ=60)
                    TCCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGG                                                                           <  SRR4302540.5054217/94‑1 (MQ=60)
                    GCCGGATCGAGCATCCCGTTAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGG                                                                           <  SRR4302540.8275576/94‑1 (MQ=60)
                    ACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGG                                                                           >  SRR4302540.8551537/1‑94 (MQ=60)
                     CCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTGATAAAGGGGGA                                                                          >  SRR4302540.4288415/1‑94 (MQ=60)
                     CCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGA                                                                          <  SRR4302540.2263234/94‑1 (MQ=60)
                     CCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGA                                                                          <  SRR4302540.9220455/94‑1 (MQ=60)
                     CCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGA                                                                          <  SRR4302540.6886217/94‑1 (MQ=60)
                      CGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAG                                                                         >  SRR4302540.6559050/1‑94 (MQ=60)
                       GGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGA                                                                        >  SRR4302540.955588/1‑94 (MQ=60)
                       GGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGA                                                                        <  SRR4302540.7761835/94‑1 (MQ=60)
                       GGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGA                                                                        <  SRR4302540.7761834/94‑1 (MQ=60)
                       GGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGA                                                                        >  SRR4302540.2273908/1‑94 (MQ=60)
                       GGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGA                                                                        >  SRR4302540.6334048/1‑94 (MQ=60)
                       CGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGA                                                                        <  SRR4302540.2746655/94‑1 (MQ=60)
                        GATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGAT                                                                       <  SRR4302540.8303485/94‑1 (MQ=60)
                        GATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGAT                                                                       >  SRR4302540.6294888/1‑94 (MQ=60)
                        GATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGAT                                                                       <  SRR4302540.2816194/94‑1 (MQ=60)
                        GATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGAT                                                                       <  SRR4302540.9308219/94‑1 (MQ=60)
                        GATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGAT                                                                       >  SRR4302540.3250062/1‑94 (MQ=60)
                        GATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGAT                                                                       >  SRR4302540.5735406/1‑94 (MQ=60)
                         ATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGGAACCTGGCTTTTCATAAAGGgggagttg                                                                      >  SRR4302540.7814919/1‑86 (MQ=60)
                         ATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGGGATC                                                                      >  SRR4302540.8726932/1‑94 (MQ=60)
                         ATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGGGGAGATC                                                                      >  SRR4302540.4903154/1‑94 (MQ=60)
                          TCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCA                                                                     <  SRR4302540.3567341/94‑1 (MQ=60)
                          TCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCA                                                                     <  SRR4302540.5750825/94‑1 (MQ=60)
                          TCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCA                                                                     >  SRR4302540.7913261/1‑94 (MQ=60)
                          TCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCA                                                                     >  SRR4302540.1006723/1‑94 (MQ=60)
                          TCGATCATCCCGGAAAACTGTGTCGCAGGGATCACTGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCA                                                                     <  SRR4302540.3318600/94‑1 (MQ=60)
                           CGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAG                                                                    >  SRR4302540.8569432/1‑94 (MQ=60)
                           CGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAG                                                                    <  SRR4302540.9578596/94‑1 (MQ=60)
                           CGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAG                                                                    >  SRR4302540.5008661/1‑94 (MQ=60)
                           CGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAG                                                                    <  SRR4302540.4437818/94‑1 (MQ=60)
                           CGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAG                                                                    >  SRR4302540.821199/1‑94 (MQ=60)
                           CGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAC                                                                    >  SRR4302540.5433004/1‑94 (MQ=60)
                            GATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCCTAAAGGTGGAGATCAGC                                                                   >  SRR4302540.2231594/1‑94 (MQ=60)
                            GATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGC                                                                   >  SRR4302540.2549209/1‑94 (MQ=60)
                            GATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGC                                                                   <  SRR4302540.965696/94‑1 (MQ=60)
                            GATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGC                                                                   >  SRR4302540.1333816/1‑94 (MQ=60)
                            GATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGC                                                                   >  SRR4302540.1333815/1‑94 (MQ=60)
                            GATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATAGCGGCAACCTGGCTTTTCATTAAGTTGGAGATCgtc                                                                   >  SRR4302540.2549208/1‑91 (MQ=60)
                             ATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCA                                                                  <  SRR4302540.2151469/94‑1 (MQ=60)
                             ATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCA                                                                  <  SRR4302540.4753764/94‑1 (MQ=60)
                             ATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCA                                                                  <  SRR4302540.9421195/94‑1 (MQ=60)
                              TCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAG                                                                 <  SRR4302540.6477751/94‑1 (MQ=60)
                              TCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAG                                                                 <  SRR4302540.2747314/94‑1 (MQ=60)
                              TCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAG                                                                 <  SRR4302540.6465698/94‑1 (MQ=60)
                                ATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGGC                                                               >  SRR4302540.2832954/1‑94 (MQ=60)
                                ATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCC                                                               <  SRR4302540.5121118/94‑1 (MQ=60)
                                ATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCC                                                               >  SRR4302540.4894585/1‑94 (MQ=60)
                                  CCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCC                                                             >  SRR4302540.3080494/1‑94 (MQ=60)
                                    CGGAAAACTGTGTCGGCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCAT                                                           <  SRR4302540.2486218/94‑1 (MQ=60)
                                    CGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCAT                                                           <  SRR4302540.1063880/94‑1 (MQ=60)
                                     GGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCTATT                                                          >  SRR4302540.6292092/1‑94 (MQ=60)
                                     GGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATT                                                          <  SRR4302540.2554205/94‑1 (MQ=60)
                                     GGAAAACTGTGTCGCCGGGATCAACGTGATAATCCCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATT                                                          <  SRR4302540.5825073/94‑1 (MQ=60)
                                       AAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCC                                                        >  SRR4302540.4037491/1‑94 (MQ=60)
                                       AAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCC                                                        <  SRR4302540.6734215/94‑1 (MQ=60)
                                       AAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCC                                                        <  SRR4302540.7416392/94‑1 (MQ=60)
                                        AAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCCACCTGGCTTTTCATCAAGGTGGAGATCAGCAGCCCCCTTCCG                                                       >  SRR4302540.6309792/1‑94 (MQ=60)
                                         AACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGG                                                      <  SRR4302540.5647113/94‑1 (MQ=60)
                                          ACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGT                                                     <  SRR4302540.8408302/94‑1 (MQ=60)
                                          ACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGG                                                     >  SRR4302540.2595405/1‑94 (MQ=60)
                                          ACTCTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGCCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGT                                                     <  SRR4302540.1045102/94‑1 (MQ=60)
                                           CTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTG                                                    <  SRR4302540.6742042/94‑1 (MQ=60)
                                           CTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTG                                                    >  SRR4302540.7971365/1‑94 (MQ=60)
                                           CTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTG                                                    >  SRR4302540.9621563/1‑94 (MQ=60)
                                             GTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGC                                                  >  SRR4302540.8240578/1‑94 (MQ=60)
                                               GTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAA                                                <  SRR4302540.3238985/94‑1 (MQ=60)
                                                TCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAAT                                               >  SRR4302540.9397201/1‑94 (MQ=60)
                                                   CCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAAGCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGAT                                            >  SRR4302540.5134480/1‑94 (MQ=60)
                                                   CCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGAT                                            <  SRR4302540.759559/94‑1 (MQ=60)
                                                   CCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGAT                                            >  SRR4302540.5025987/1‑94 (MQ=60)
                                                    CGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATG                                           >  SRR4302540.4039283/1‑94 (MQ=60)
                                                    CGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATG                                           <  SRR4302540.4766707/94‑1 (MQ=60)
                                                    CGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATG                                           >  SRR4302540.8882572/1‑94 (MQ=60)
                                                    CGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATG                                           <  SRR4302540.3271450/94‑1 (MQ=60)
                                                     GGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCTCCATTCCGGTGGCAATGATGA                                          >  SRR4302540.8779259/1‑94 (MQ=60)
                                                      GGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGAT                                         >  SRR4302540.7541706/1‑94 (MQ=60)
                                                      GGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGAT                                         >  SRR4302540.10098041/1‑94 (MQ=60)
                                                      GGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGAT                                         >  SRR4302540.4644548/1‑94 (MQ=60)
                                                      GGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGAT                                         >  SRR4302540.7541705/1‑94 (MQ=60)
                                                      GGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGAT                                         <  SRR4302540.594352/94‑1 (MQ=60)
                                                       GATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATA                                        >  SRR4302540.8515893/1‑94 (MQ=60)
                                                       GATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATA                                        <  SRR4302540.882175/94‑1 (MQ=60)
                                                       GAACAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATA                                        <  SRR4302540.7339659/94‑1 (MQ=60)
                                                        ATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATTT                                       <  SRR4302540.853736/94‑1 (MQ=60)
                                                        ATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATAT                                       <  SRR4302540.853735/94‑1 (MQ=60)
                                                        ATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATAT                                       <  SRR4302540.6832264/94‑1 (MQ=60)
                                                        ATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATAT                                       <  SRR4302540.4707352/94‑1 (MQ=60)
                                                         TCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATA                                      <  SRR4302540.5610609/94‑1 (MQ=60)
                                                         TCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATA                                      >  SRR4302540.1312854/1‑94 (MQ=60)
                                                          CAACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATAC                                     <  SRR4302540.1962078/94‑1 (MQ=60)
                                                          CAACGTGATAATCGCCGGTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATAC                                     <  SRR4302540.1136813/94‑1 (MQ=60)
                                                           AACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACA                                    <  SRR4302540.3728242/94‑1 (MQ=60)
                                                            ACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAG                                   <  SRR4302540.6555874/94‑1 (MQ=60)
                                                            ACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAG                                   <  SRR4302540.6555873/94‑1 (MQ=60)
                                                            ACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAG                                   <  SRR4302540.5434048/94‑1 (MQ=60)
                                                            ACGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAG                                   <  SRR4302540.7721602/94‑1 (MQ=60)
                                                             CGTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGC                                  >  SRR4302540.350415/1‑94 (MQ=60)
                                                              GTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCA                                 <  SRR4302540.813252/94‑1 (MQ=60)
                                                              GTGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCA                                 >  SRR4302540.1368724/1‑94 (MQ=60)
                                                               TGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAG                                >  SRR4302540.7949726/1‑94 (MQ=60)
                                                               TGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAG                                <  SRR4302540.7109012/94‑1 (MQ=60)
                                                               TGATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAG                                >  SRR4302540.2007068/1‑94 (MQ=60)
                                                                GATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGC                               <  SRR4302540.7154602/94‑1 (MQ=60)
                                                                GATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGC                               <  SRR4302540.475356/94‑1 (MQ=60)
                                                                GATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGC                               >  SRR4302540.270728/1‑94 (MQ=60)
                                                                 ATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCG                              >  SRR4302540.9625698/1‑94 (MQ=60)
                                                                 ATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCG                              <  SRR4302540.4377828/94‑1 (MQ=60)
                                                                 ATAATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCG                              >  SRR4302540.9263945/1‑94 (MQ=60)
                                                                   AATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCC                            >  SRR4302540.3220876/1‑94 (MQ=60)
                                                                   AATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCC                            <  SRR4302540.6402145/94‑1 (MQ=60)
                                                                    ATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCG                           <  SRR4302540.7416559/94‑1 (MQ=60)
                                                                    ATCGCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCG                           <  SRR4302540.8608118/94‑1 (MQ=60)
                                                                       GCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCA                        <  SRR4302540.899965/94‑1 (MQ=60)
                                                                       GCCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCA                        <  SRR4302540.2778813/94‑1 (MQ=60)
                                                                        CCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAG                       <  SRR4302540.5613704/94‑1 (MQ=60)
                                                                        CCGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAG                       <  SRR4302540.990980/94‑1 (MQ=60)
                                                                         CGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGG                      <  SRR4302540.4824148/94‑1 (MQ=60)
                                                                         CGTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGG                      >  SRR4302540.4318237/1‑94 (MQ=60)
                                                                         CGTGCTGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCGCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGG                      <  SRR4302540.9813406/94‑1 (MQ=60)
                                                                          GTTCCGAAAATGGCGGCAACCTGTCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGG                     <  SRR4302540.3174113/94‑1 (MQ=60)
                                                                          GTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGG                     >  SRR4302540.9300003/1‑94 (MQ=60)
                                                                          GTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGG                     >  SRR4302540.7375371/1‑94 (MQ=60)
                                                                          GTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGG                     >  SRR4302540.3064147/1‑94 (MQ=60)
                                                                          GTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGG                     >  SRR4302540.5858678/1‑94 (MQ=60)
                                                                          GTTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGG                     >  SRR4302540.8121512/1‑94 (MQ=60)
                                                                           TTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGT                    >  SRR4302540.9407807/1‑94 (MQ=60)
                                                                           TTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGT                    <  SRR4302540.7183295/94‑1 (MQ=60)
                                                                           TTCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGT                    <  SRR4302540.8268882/94‑1 (MQ=60)
                                                                            TCCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGCGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTG                   >  SRR4302540.2902924/1‑94 (MQ=60)
                                                                             CCGAAAATGGCGGCAATCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGA                  <  SRR4302540.1781500/94‑1 (MQ=60)
                                                                             CCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGA                  <  SRR4302540.9250851/94‑1 (MQ=60)
                                                                             CCGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGA                  <  SRR4302540.2682390/94‑1 (MQ=60)
                                                                              CGAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAG                 >  SRR4302540.1658278/1‑94 (MQ=60)
                                                                               GAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGC                <  SRR4302540.581917/94‑1 (MQ=60)
                                                                               GAAAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGC                >  SRR4302540.9222830/1‑94 (MQ=60)
                                                                                 AAATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCAATCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGT              >  SRR4302540.7501223/1‑94 (MQ=60)
                                                                                  AATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTC             <  SRR4302540.6204469/94‑1 (MQ=60)
                                                                                  AATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTC             >  SRR4302540.2943650/1‑94 (MQ=60)
                                                                                   ATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCA            >  SRR4302540.313741/1‑94 (MQ=60)
                                                                                   ATGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGCGAGCGTCA            >  SRR4302540.5759962/1‑94 (MQ=60)
                                                                                    TGGCGGTAACCTGGCTTTTCATAAAGGTGGATATCAGCAGCCCCATTCCGGTGGCAATGAGGATATACAGCAGCGCCGCCAGGGTGAGCGTCAG           <  SRR4302540.7711513/94‑1 (MQ=60)
                                                                                    TGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAG           <  SRR4302540.2374000/94‑1 (MQ=60)
                                                                                    TGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAG           <  SRR4302540.751459/94‑1 (MQ=60)
                                                                                    AGGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAG           <  SRR4302540.7711512/94‑1 (MQ=60)
                                                                                     GGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGG          <  SRR4302540.196542/94‑1 (MQ=60)
                                                                                     GGCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGG          <  SRR4302540.3584628/94‑1 (MQ=60)
                                                                                      GCGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGA         <  SRR4302540.7866393/94‑1 (MQ=60)
                                                                                       CGGCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGAA        <  SRR4302540.6278630/94‑1 (MQ=60)
                                                                                         GCAACCTGTCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGAAAC      <  SRR4302540.4059863/94‑1 (MQ=60)
                                                                                         GCAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGAAAC      <  SRR4302540.3116268/94‑1 (MQ=60)
                                                                                          CAACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGAAACT     <  SRR4302540.442502/94‑1 (MQ=60)
                                                                                           AACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGAAACTG    >  SRR4302540.3744792/1‑94 (MQ=60)
                                                                                           AACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGAAACTG    >  SRR4302540.631075/1‑94 (MQ=60)
                                                                                            ACCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGAAACTGC   >  SRR4302540.7916727/1‑94 (MQ=60)
                                                                                             CCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGAAACTGCT  >  SRR4302540.8348046/1‑94 (MQ=60)
                                                                                             |                                                                                             
CAGGCCCTTCCAGCGAAGCTACCGGATCGATCATCCCGGAAAACTGTGTCGCCGGGATCAACGTGATAATCGCCGTTCCGAAAATGGCGGCAATCTGGCTTTTCATAAAGGTGGAGATCAGCAGCCCCATTCCGGTGGCAATGATGATATACAGCAGCGCCGCCAGGGTGAGCGTCAGGAAACTGCC  >  NC_000913/3624607‑3624793

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑