Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,705,464 T→C intergenic (‑130/+781) dppA ← / ← proK dipeptide transport protein/tRNA‑Pro

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,705,4640TC99.9% 2372.1 / ‑5.2 726intergenic (‑130/+781)dppA/proKdipeptide transport protein/tRNA‑Pro
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (407/318);  total (408/318)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.74e-01

Only 100 of 744 total aligned reads displayed.

TGCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGTGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTT  >  NC_000913/3705374‑3705553
                                                                                          |                                                                                         
 gCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTa                                                                                        >  1:5999916/1‑93 (MQ=255)
 gCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTa                                                                                        >  1:6798388/1‑93 (MQ=255)
 gCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTa                                                                                        <  1:10008599/93‑1 (MQ=255)
   aGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAAc                                                                                      >  1:525381/1‑93 (MQ=255)
    gTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACa                                                                                     >  1:2406033/1‑93 (MQ=255)
    gTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACa                                                                                     >  1:2853849/1‑93 (MQ=255)
     tGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAg                                                                                    >  2:2968912/1‑93 (MQ=255)
     tGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAg                                                                                    >  1:8055804/1‑93 (MQ=255)
     tGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAg                                                                                    >  2:5412453/1‑93 (MQ=255)
     tGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAg                                                                                    >  2:8638694/1‑93 (MQ=255)
     tGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAg                                                                                    >  1:1185877/1‑93 (MQ=255)
      gggTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGt                                                                                   <  2:594123/93‑1 (MQ=255)
       ggTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTg                                                                                  <  2:2104316/93‑1 (MQ=255)
       ggTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTg                                                                                  <  2:2010384/93‑1 (MQ=255)
        gTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGc                                                                                 <  2:4527449/93‑1 (MQ=255)
          tGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCgg                                                                               <  1:2755322/93‑1 (MQ=255)
             cGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAtc                                                                            <  2:2449812/93‑1 (MQ=255)
                tGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAtcctc                                                                         <  2:3990367/93‑1 (MQ=255)
                tGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAtcctc                                                                         >  1:8355573/1‑93 (MQ=255)
                 gCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGAtcctcc                                                                        >  1:9441166/1‑93 (MQ=255)
                   cTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCAt                                                                      >  1:9169300/1‑93 (MQ=255)
                   cTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCAt                                                                      >  1:1584645/1‑93 (MQ=255)
                    tGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATa                                                                     >  2:1065919/1‑93 (MQ=255)
                     gACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATaa                                                                    <  2:4331700/93‑1 (MQ=255)
                     gACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATaa                                                                    >  1:4216996/1‑93 (MQ=255)
                     gACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATaa                                                                    <  1:4361830/93‑1 (MQ=255)
                     gACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATaa                                                                    >  1:7805887/1‑93 (MQ=255)
                     gACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATaa                                                                    <  1:7619075/93‑1 (MQ=255)
                       ccTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGTGGTGGGGATGTCGTACTAATTAACTTCTGCTTAACAGAGCGGTTCCTCCATaatt                                                                  >  2:9269904/1‑91 (MQ=255)
                       ccTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATaaaa                                                                  <  2:6207949/93‑1 (MQ=255)
                       ccTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATaaaa                                                                  <  1:1333285/93‑1 (MQ=255)
                       ccTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATaaaa                                                                  >  1:3787060/1‑93 (MQ=255)
                         ttttttgttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATg                                                                >  2:2571955/1‑93 (MQ=255)
                           ttttgttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGcc                                                              <  2:1360381/93‑1 (MQ=255)
                           ttttgttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGcc                                                              <  2:8240472/93‑1 (MQ=255)
                            tttgttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGccc                                                             <  1:9874688/93‑1 (MQ=255)
                             ttgttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGcccc                                                            <  2:7757634/93‑1 (MQ=255)
                               gttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTc                                                          <  1:6947469/93‑1 (MQ=255)
                               gttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTc                                                          <  2:7310142/93‑1 (MQ=255)
                               gttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTc                                                          >  1:3346666/1‑93 (MQ=255)
                                ttttttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCg                                                         <  2:1829199/93‑1 (MQ=255)
                                    ttgCCCGGTCGGGTCAACGTTATGAGGTGGTGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGAc                                                     <  1:5129714/93‑1 (MQ=255)
                                    ttgCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGAc                                                     <  2:7491839/93‑1 (MQ=255)
                                          ggTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACaa                                               <  2:368574/93‑1 (MQ=255)
                                           gTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAAt                                              >  2:6964183/1‑93 (MQ=255)
                                            tCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATc                                             <  2:9502592/93‑1 (MQ=255)
                                                gTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTc                                         >  1:2992544/1‑93 (MQ=255)
                                                gTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTc                                         <  2:966004/93‑1 (MQ=255)
                                                gTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTc                                         >  1:3476931/1‑93 (MQ=255)
                                                 tCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCa                                        >  1:6314990/1‑93 (MQ=255)
                                                  cAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACGGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCaa                                       <  2:5559194/93‑1 (MQ=255)
                                                  cAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCaa                                       >  1:4917446/1‑93 (MQ=255)
                                                    aCGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACa                                     >  2:8390757/1‑93 (MQ=255)
                                                      gTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGa                                   <  2:885254/93‑1 (MQ=255)
                                                       ttATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGaa                                  >  2:605340/1‑93 (MQ=255)
                                                       ttATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGaa                                  <  1:3108494/93‑1 (MQ=255)
                                                       ttATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGaa                                  <  2:7089688/93‑1 (MQ=255)
                                                       ttATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGaa                                  <  2:2341535/93‑1 (MQ=255)
                                                        tATGAGGGGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAAt                                 >  1:5930319/1‑93 (MQ=255)
                                                         aTGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAAtg                                <  2:674933/93‑1 (MQ=255)
                                                          tGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAAtgt                               <  1:5721552/93‑1 (MQ=255)
                                                          tGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAAtgt                               <  2:3823449/93‑1 (MQ=255)
                                                              gTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGaaa                           >  2:5725131/1‑93 (MQ=255)
                                                               tGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGaaaa                          >  2:8713049/1‑93 (MQ=255)
                                                               tGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGaaaa                          <  2:8589646/93‑1 (MQ=255)
                                                               tGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGaaaa                          <  1:2612733/93‑1 (MQ=255)
                                                                ggggATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAAc                         >  2:9866680/1‑93 (MQ=255)
                                                                ggggATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAAc                         <  1:6705073/93‑1 (MQ=255)
                                                                 gggATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACg                        >  2:4913130/1‑93 (MQ=255)
                                                                   gATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTc                      <  1:3961921/93‑1 (MQ=255)
                                                                    aTGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCa                     >  1:4711875/1‑93 (MQ=255)
                                                                    aTGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCa                     <  1:8493512/93‑1 (MQ=255)
                                                                    aTGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCa                     <  1:7365660/93‑1 (MQ=255)
                                                                    aTGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCa                     <  2:2816183/93‑1 (MQ=255)
                                                                    aTGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCa                     >  2:3454545/1‑93 (MQ=255)
                                                                     tGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACCATCTGTCAACAGAATGTGAAAACGTCaa                    >  2:1572083/1‑93 (MQ=255)
                                                                     tGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCaa                    <  1:3610815/93‑1 (MQ=255)
                                                                      gCCGTACTAATTAACATCAGCGTAACAGTGGGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAAt                   <  1:7484751/93‑1 (MQ=255)
                                                                      gCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAAt                   <  1:770679/93‑1 (MQ=255)
                                                                        cGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAGCAGAATGGGAAAACGTCATTAc                 >  1:2101319/1‑93 (MQ=255)
                                                                        cGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATAc                 <  2:7883051/93‑1 (MQ=255)
                                                                        cGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATAc                 <  1:8696259/93‑1 (MQ=255)
                                                                        cGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATAc                 <  2:9075029/93‑1 (MQ=255)
                                                                        cGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATAc                 >  2:4186148/1‑93 (MQ=255)
                                                                         gTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACa                <  1:549910/93‑1 (MQ=255)
                                                                         gTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACa                <  2:6342067/93‑1 (MQ=255)
                                                                         gTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACa                <  1:175696/93‑1 (MQ=255)
                                                                          tACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAg               >  1:9710847/1‑93 (MQ=255)
                                                                          tACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAg               >  1:649212/1‑93 (MQ=255)
                                                                          tACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAg               >  2:5060348/1‑93 (MQ=255)
                                                                           aCTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGc              >  1:4484042/1‑93 (MQ=255)
                                                                            cTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGcc             >  1:895744/1‑93 (MQ=255)
                                                                             tAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCa            >  2:65459/1‑93 (MQ=255)
                                                                              aaTTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCaa           <  2:5266556/93‑1 (MQ=255)
                                                                              aaTTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCaa           >  1:3215322/1‑93 (MQ=255)
                                                                                ttAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAAcc         >  2:4678181/1‑93 (MQ=255)
                                                                                 tAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCg        >  2:1180187/1‑93 (MQ=255)
                                                                                 tAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCg        <  1:7928770/93‑1 (MQ=255)
                                                                                  aaCATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCgg       >  1:6151152/1‑93 (MQ=255)
                                                                                   aCATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCggg      >  2:311446/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGTGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTT  >  NC_000913/3705374‑3705553

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 382 total aligned reads displayed.
CTTTGCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGTGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTTAC  >  NC_000913/3705371‑3705555
                                                                                             |                                                                                           
CTTTGCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGC                                                                                             <  SRR4302540.5983642/94‑1 (MQ=60)
   TGCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTA                                                                                          >  SRR4302540.6066414/1‑94 (MQ=60)
    GCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAA                                                                                         <  SRR4302540.13849/94‑1 (MQ=60)
    GCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAA                                                                                         <  SRR4302540.10125151/94‑1 (MQ=60)
      AGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACA                                                                                       <  SRR4302540.1206112/94‑1 (MQ=60)
      AGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACA                                                                                       >  SRR4302540.7482198/1‑94 (MQ=60)
      AGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGGGGGGATGCCGTACTAATTAACATCAGCGTAACA                                                                                       >  SRR4302540.7911398/1‑94 (MQ=60)
       GTGGGTTGTCGTTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAG                                                                                      <  SRR4302540.7454068/94‑1 (MQ=60)
       GTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAG                                                                                      <  SRR4302540.3298462/94‑1 (MQ=60)
       GTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAG                                                                                      >  SRR4302540.3067963/1‑94 (MQ=60)
       GTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAG                                                                                      >  SRR4302540.8149347/1‑94 (MQ=60)
       GTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAG                                                                                      <  SRR4302540.7682317/94‑1 (MQ=60)
        TGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGT                                                                                     <  SRR4302540.9802706/94‑1 (MQ=60)
        TGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGT                                                                                     <  SRR4302540.3019892/94‑1 (MQ=60)
         GGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTG                                                                                    <  SRR4302540.4321881/94‑1 (MQ=60)
          GGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGC                                                                                   >  SRR4302540.6325689/1‑94 (MQ=60)
           GTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCG                                                                                  >  SRR4302540.2695560/1‑94 (MQ=60)
           GTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGGGGGGATGGCGTACTAATTAATATCAGCGTAACAGTGCG                                                                                  >  SRR4302540.3557234/1‑94 (MQ=60)
            TTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGA                                                                                 >  SRR4302540.2914095/1‑94 (MQ=60)
            GTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGG                                                                                 <  SRR4302540.1117262/94‑1 (MQ=60)
             TGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGA                                                                                <  SRR4302540.2785102/94‑1 (MQ=60)
             TGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGA                                                                                >  SRR4302540.5231133/1‑94 (MQ=60)
               TCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAATAGTGCGGATC                                                                              <  SRR4302540.8424955/94‑1 (MQ=60)
               TCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATC                                                                              >  SRR4302540.8371631/1‑94 (MQ=60)
                CGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCC                                                                             >  SRR4302540.6249528/1‑94 (MQ=60)
                CGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCC                                                                             <  SRR4302540.4804457/94‑1 (MQ=60)
                 GCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCT                                                                            >  SRR4302540.1603065/1‑94 (MQ=60)
                   TTCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCC                                                                          <  SRR4302540.1297269/94‑1 (MQ=60)
                   TGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCC                                                                          >  SRR4302540.1704402/1‑94 (MQ=60)
                    GCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCA                                                                         <  SRR4302540.1511552/94‑1 (MQ=60)
                     CCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCAT                                                                        >  SRR4302540.9287305/1‑94 (MQ=60)
                     CCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCAT                                                                        >  SRR4302540.6935092/1‑94 (MQ=60)
                     CCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCAT                                                                        >  SRR4302540.8533450/1‑94 (MQ=60)
                     CCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCAT                                                                        >  SRR4302540.5639397/1‑94 (MQ=60)
                      CTGACCTTTTTTGTTTTTTTCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATA                                                                       <  SRR4302540.3578088/94‑1 (MQ=60)
                      CTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATA                                                                       >  SRR4302540.7102367/1‑94 (MQ=60)
                      CTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATA                                                                       >  SRR4302540.911544/1‑94 (MQ=60)
                      CTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATA                                                                       >  SRR4302540.3458311/1‑94 (MQ=60)
                      CTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATA                                                                       >  SRR4302540.769694/1‑94 (MQ=60)
                       TGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAA                                                                      >  SRR4302540.4394716/1‑94 (MQ=60)
                       TGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAA                                                                      >  SRR4302540.6835684/1‑94 (MQ=60)
                       TGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAA                                                                      >  SRR4302540.7897107/1‑94 (MQ=60)
                       TGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAA                                                                      >  SRR4302540.601613/1‑94 (MQ=60)
                       TGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAA                                                                      >  SRR4302540.5511038/1‑94 (MQ=60)
                        GACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAA                                                                     <  SRR4302540.7704748/94‑1 (MQ=60)
                        GACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAA                                                                     >  SRR4302540.3861329/1‑94 (MQ=60)
                        GACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAA                                                                     <  SRR4302540.4409257/94‑1 (MQ=60)
                         ACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAA                                                                    >  SRR4302540.5400762/1‑94 (MQ=60)
                         ACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAA                                                                    >  SRR4302540.8739981/1‑94 (MQ=60)
                         ACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAA                                                                    >  SRR4302540.3628426/1‑94 (MQ=60)
                         ACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAA                                                                    >  SRR4302540.7519129/1‑94 (MQ=60)
                          CCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAAT                                                                   <  SRR4302540.3396024/94‑1 (MQ=60)
                          CCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAAT                                                                   <  SRR4302540.4702067/94‑1 (MQ=60)
                          CCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAAT                                                                   <  SRR4302540.8654785/94‑1 (MQ=60)
                          CCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAAT                                                                   <  SRR4302540.1347229/94‑1 (MQ=60)
                           CTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATG                                                                  >  SRR4302540.2446078/1‑94 (MQ=60)
                           CTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATG                                                                  >  SRR4302540.9635603/1‑94 (MQ=60)
                           CTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATG                                                                  >  SRR4302540.3776417/1‑94 (MQ=60)
                           CTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATG                                                                  >  SRR4302540.5808759/1‑94 (MQ=60)
                           CTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATG                                                                  >  SRR4302540.7860757/1‑94 (MQ=60)
                            TTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGC                                                                 <  SRR4302540.4185770/94‑1 (MQ=60)
                            TTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGC                                                                 <  SRR4302540.4794968/94‑1 (MQ=60)
                            TTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGC                                                                 <  SRR4302540.5140252/94‑1 (MQ=60)
                            TTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGC                                                                 >  SRR4302540.6783080/1‑94 (MQ=60)
                             TTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCC                                                                >  SRR4302540.2958068/1‑94 (MQ=60)
                             TTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCC                                                                <  SRR4302540.7783716/94‑1 (MQ=60)
                              TTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCC                                                               <  SRR4302540.327086/94‑1 (MQ=60)
                              TTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCC                                                               >  SRR4302540.4671065/1‑94 (MQ=60)
                              TTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCC                                                               <  SRR4302540.8718158/94‑1 (MQ=60)
                              TTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCC                                                               >  SRR4302540.2246077/1‑94 (MQ=60)
                               TTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCC                                                              <  SRR4302540.3844568/94‑1 (MQ=60)
                               TTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCC                                                              <  SRR4302540.6464977/94‑1 (MQ=60)
                                TTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCT                                                             <  SRR4302540.9188017/94‑1 (MQ=60)
                                TTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCT                                                             <  SRR4302540.6770002/94‑1 (MQ=60)
                                TTGTTTTTGGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCT                                                             <  SRR4302540.7899104/94‑1 (MQ=60)
                                 TGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTC                                                            >  SRR4302540.3383373/1‑94 (MQ=60)
                                  TTTTTTTGCCCGGTCGGGTCAACGTTAGTAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCG                                                           <  SRR4302540.3682074/94‑1 (MQ=60)
                                  GTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCG                                                           <  SRR4302540.4289498/94‑1 (MQ=60)
                                  GTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCG                                                           <  SRR4302540.7024787/94‑1 (MQ=60)
                                   TTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGT                                                          <  SRR4302540.1836486/94‑1 (MQ=60)
                                    TTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTG                                                         <  SRR4302540.2859897/94‑1 (MQ=60)
                                      TTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGAC                                                       <  SRR4302540.9567549/94‑1 (MQ=60)
                                       TTGCCCGGTCGGGTCAACGTTATGAGGTGGTGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACC                                                      <  SRR4302540.5185273/94‑1 (MQ=60)
                                       TTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACC                                                      <  SRR4302540.772964/94‑1 (MQ=60)
                                        TGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGCTCCTCCCTAACATGCCCCTCGTGACCT                                                     >  SRR4302540.320968/1‑94 (MQ=60)
                                        TGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCT                                                     >  SRR4302540.718109/1‑94 (MQ=60)
                                          CCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTAC                                                   <  SRR4302540.3104316/94‑1 (MQ=60)
                                           CCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACA                                                  >  SRR4302540.2405047/1‑94 (MQ=60)
                                             GGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACCAT                                                >  SRR4302540.5748114/1‑94 (MQ=60)
                                             GGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAAT                                                >  SRR4302540.10001750/1‑94 (MQ=60)
                                             GGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAAT                                                >  SRR4302540.6612525/1‑94 (MQ=60)
                                             GGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAAT                                                >  SRR4302540.705692/1‑94 (MQ=60)
                                             GGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAAT                                                >  SRR4302540.2764260/1‑94 (MQ=60)
                                             GGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAAT                                                >  SRR4302540.8027313/1‑94 (MQ=60)
                                             GGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCACGTGACCTACAAT                                                >  SRR4302540.7887383/1‑94 (MQ=60)
                                              GTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATC                                               <  SRR4302540.9365676/94‑1 (MQ=60)
                                               TCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCT                                              <  SRR4302540.804984/94‑1 (MQ=60)
                                               TCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCT                                              <  SRR4302540.3681205/94‑1 (MQ=60)
                                               TCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCT                                              >  SRR4302540.7460398/1‑94 (MQ=60)
                                               TCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCT                                              <  SRR4302540.587441/94‑1 (MQ=60)
                                               TCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCT                                              <  SRR4302540.4259082/94‑1 (MQ=60)
                                               TCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCT                                              <  SRR4302540.3224736/94‑1 (MQ=60)
                                               GCGGGTCAACCCTATGAGGGGGGGATGCCGTACTAATTACCATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCT                                              <  SRR4302540.6342119/94‑1 (MQ=60)
                                                CGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTG                                             <  SRR4302540.8438712/94‑1 (MQ=60)
                                                CGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTG                                             >  SRR4302540.9031234/1‑94 (MQ=60)
                                                 GGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGT                                            >  SRR4302540.2593496/1‑94 (MQ=60)
                                                 GGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGT                                            >  SRR4302540.530394/1‑94 (MQ=60)
                                                 GGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGC                                            >  SRR4302540.31392/1‑94 (MQ=60)
                                                  GGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTC                                           <  SRR4302540.986065/94‑1 (MQ=60)
                                                  GGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCATCGTGACCTACAATCTGTC                                           >  SRR4302540.4852362/1‑94 (MQ=60)
                                                   GTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCA                                          >  SRR4302540.6385313/1‑94 (MQ=60)
                                                   GTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCA                                          >  SRR4302540.4607703/1‑94 (MQ=60)
                                                    TCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAA                                         >  SRR4302540.4970408/1‑94 (MQ=60)
                                                    GCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAA                                         <  SRR4302540.201265/94‑1 (MQ=60)
                                                     CAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAAC                                        >  SRR4302540.4450266/1‑94 (MQ=60)
                                                     CAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAAC                                        <  SRR4302540.1444094/94‑1 (MQ=60)
                                                     CAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAAC                                        >  SRR4302540.3396205/1‑94 (MQ=60)
                                                     CAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAAC                                        >  SRR4302540.7749915/1‑94 (MQ=60)
                                                      AACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACA                                       >  SRR4302540.9247592/1‑94 (MQ=60)
                                                      AACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACA                                       >  SRR4302540.6525320/1‑94 (MQ=60)
                                                      AACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACA                                       <  SRR4302540.4438479/94‑1 (MQ=60)
                                                      AACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACA                                       <  SRR4302540.2128027/94‑1 (MQ=60)
                                                       ACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAG                                      <  SRR4302540.3241689/94‑1 (MQ=60)
                                                        CGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGA                                     >  SRR4302540.5024425/1‑94 (MQ=60)
                                                        CGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGA                                     >  SRR4302540.5283148/1‑94 (MQ=60)
                                                          TTATGAGGGGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAAT                                   >  SRR4302540.5995848/1‑94 (MQ=60)
                                                          GTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAAT                                   <  SRR4302540.1719723/94‑1 (MQ=60)
                                                          GTATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAAT                                   <  SRR4302540.2045184/94‑1 (MQ=60)
                                                           TATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATG                                  >  SRR4302540.5094502/1‑94 (MQ=60)
                                                            ATGAGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGT                                 <  SRR4302540.6702212/94‑1 (MQ=60)
                                                              GAGGTGGGGATGCCGTACTAATTAACATCAGTGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGA                               >  SRR4302540.3903797/1‑94 (MQ=60)
                                                               AGGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAA                              >  SRR4302540.6854775/1‑94 (MQ=60)
                                                                GGTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAA                             <  SRR4302540.9956217/94‑1 (MQ=60)
                                                                 GTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAA                            >  SRR4302540.7010376/1‑94 (MQ=60)
                                                                 GTGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAA                            <  SRR4302540.5434828/94‑1 (MQ=60)
                                                                  TGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAAC                           >  SRR4302540.10024645/1‑94 (MQ=60)
                                                                  TGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAAC                           <  SRR4302540.2740046/94‑1 (MQ=60)
                                                                  TGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAAC                           <  SRR4302540.2640941/94‑1 (MQ=60)
                                                                  TGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAAC                           <  SRR4302540.40450/94‑1 (MQ=60)
                                                                  TGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAAC                           <  SRR4302540.250344/94‑1 (MQ=60)
                                                                  TGGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAAC                           <  SRR4302540.6062178/94‑1 (MQ=60)
                                                                   GGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACG                          >  SRR4302540.3487821/1‑94 (MQ=60)
                                                                   GGGGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACG                          <  SRR4302540.6188897/94‑1 (MQ=60)
                                                                     GGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTC                        >  SRR4302540.6179481/1‑94 (MQ=60)
                                                                     GGATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTC                        >  SRR4302540.2992133/1‑94 (MQ=60)
                                                                      GATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCA                       >  SRR4302540.8013753/1‑94 (MQ=60)
                                                                      GATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCA                       <  SRR4302540.4004647/94‑1 (MQ=60)
                                                                      GATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGACAACAGAATGTGAAAACGTCA                       <  SRR4302540.3610795/94‑1 (MQ=60)
                                                                       ATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAA                      <  SRR4302540.9479658/94‑1 (MQ=60)
                                                                       ATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAA                      >  SRR4302540.4510745/1‑94 (MQ=60)
                                                                       ATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAA                      >  SRR4302540.1300128/1‑94 (MQ=60)
                                                                       ATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAA                      >  SRR4302540.8583782/1‑94 (MQ=60)
                                                                       ATGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAA                      <  SRR4302540.8592206/94‑1 (MQ=60)
                                                                        TGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAAT                     >  SRR4302540.6660117/1‑94 (MQ=60)
                                                                        TGCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAAT                     <  SRR4302540.3650282/94‑1 (MQ=60)
                                                                         TCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATA                    <  SRR4302540.215546/94‑1 (MQ=60)
                                                                         GCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATA                    <  SRR4302540.778880/94‑1 (MQ=60)
                                                                         GCCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATA                    <  SRR4302540.8950688/94‑1 (MQ=60)
                                                                          CCGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATAC                   <  SRR4302540.3175069/94‑1 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCTGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACA                  >  SRR4302540.1878413/1‑94 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACA                  >  SRR4302540.6107437/1‑94 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACA                  >  SRR4302540.8829248/1‑94 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACA                  >  SRR4302540.9732748/1‑94 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACA                  <  SRR4302540.7890706/94‑1 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACA                  >  SRR4302540.6878099/1‑94 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACA                  >  SRR4302540.622301/1‑94 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACA                  <  SRR4302540.3763700/94‑1 (MQ=60)
                                                                           CGTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACA                  >  SRR4302540.951947/1‑94 (MQ=60)
                                                                            GTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAACCGTCAATAAAG                 >  SRR4302540.3044756/1‑94 (MQ=60)
                                                                            GTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAG                 >  SRR4302540.2086785/1‑94 (MQ=60)
                                                                            GTACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAG                 <  SRR4302540.555898/94‑1 (MQ=60)
                                                                             TACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGC                >  SRR4302540.3277245/1‑94 (MQ=60)
                                                                              ACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCC               >  SRR4302540.2573713/1‑94 (MQ=60)
                                                                              ACTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCC               >  SRR4302540.905260/1‑94 (MQ=60)
                                                                               CTAATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCA              <  SRR4302540.492683/94‑1 (MQ=60)
                                                                                 AATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAAC            >  SRR4302540.601624/1‑94 (MQ=60)
                                                                                 AATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAAC            <  SRR4302540.5532051/94‑1 (MQ=60)
                                                                                 AATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAAC            <  SRR4302540.8085362/94‑1 (MQ=60)
                                                                                  ATTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAACACGTCAATACAGCCAACC           >  SRR4302540.7568307/1‑94 (MQ=60)
                                                                                   TTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCG          >  SRR4302540.8075081/1‑94 (MQ=60)
                                                                                   TTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCG          <  SRR4302540.9155401/94‑1 (MQ=60)
                                                                                   TTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCG          >  SRR4302540.845876/1‑94 (MQ=60)
                                                                                   TTAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCG          >  SRR4302540.4729029/1‑94 (MQ=60)
                                                                                    TAACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGG         >  SRR4302540.4345160/1‑94 (MQ=60)
                                                                                     AACATCAGCGTAACAGTGCGGATCCTCCCTAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATCCAGCCAACCGGC        >  SRR4302540.5906105/1‑94 (MQ=60)
                                                                                     AACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGG        <  SRR4302540.8769010/94‑1 (MQ=60)
                                                                                     AACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGG        >  SRR4302540.144379/1‑94 (MQ=60)
                                                                                      ACATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGA       <  SRR4302540.1179886/94‑1 (MQ=60)
                                                                                       CATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGCT      >  SRR4302540.6845948/1‑94 (MQ=60)
                                                                                       CATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGAT      <  SRR4302540.9934466/94‑1 (MQ=60)
                                                                                       CATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGAT      <  SRR4302540.1038773/94‑1 (MQ=60)
                                                                                       CATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGAT      >  SRR4302540.7418851/1‑94 (MQ=60)
                                                                                        ATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCTTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGTTT     >  SRR4302540.7660542/1‑94 (MQ=60)
                                                                                        ATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATT     <  SRR4302540.5699108/94‑1 (MQ=60)
                                                                                        ATCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATT     >  SRR4302540.2815193/1‑94 (MQ=60)
                                                                                         TCAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTT    >  SRR4302540.2854705/1‑94 (MQ=60)
                                                                                          CAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTTA   <  SRR4302540.6534652/94‑1 (MQ=60)
                                                                                          CAGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTTA   <  SRR4302540.4143298/94‑1 (MQ=60)
                                                                                           AGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTTAC  >  SRR4302540.9848710/1‑94 (MQ=60)
                                                                                           AGCGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTTAC  <  SRR4302540.2945772/94‑1 (MQ=60)
                                                                                             |                                                                                           
CTTTGCAGTGGGTTGTCGCTGCCTGACCTTTTTTGTTTTTTGCCCGGTCGGGTCAACGTTATGAGGTGGGGATGCCGTACTAATTAACATCAGTGTAACAGTGCGGATCCTCCATAAAATGCCCCTCGTGACCTACAATCTGTCAACAGAATGTGAAAACGTCAATACAGCCAACCGGGATTTAC  >  NC_000913/3705371‑3705555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑