Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,755,517 T→C intergenic (‑63/+127) yiaY ← / ← selB putative oxidoreductase/selenocysteinyl‑tRNA‑specific translation factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,755,5170TC99.5% 1322.8 / ‑3.7 406intergenic (‑63/+127)yiaY/selBputative oxidoreductase/selenocysteinyl‑tRNA‑specific translation factor
Reads supporting (aligned to +/- strand):  ref base T (0/2);  new base C (23/381);  total (23/383)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.69e-01

Only 100 of 414 total aligned reads displayed.

AAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATATGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGAATTT  >  NC_000913/3755427‑3755606
                                                                                          |                                                                                         
aggaaaTAAAGAACGTTGAAGCTGCCATATCACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGAATTTTCATTCTAAAATACGa                                                                                         <  2:5562562/89‑1 (MQ=255)
aaGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGa                                                                                         <  1:8942273/93‑1 (MQ=255)
 acgAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGAt                                                                                        <  1:9484020/91‑1 (MQ=255)
 aGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGAt                                                                                        <  2:3652006/93‑1 (MQ=255)
 aGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGAt                                                                                        <  2:8713280/93‑1 (MQ=255)
  ggAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATc                                                                                       <  2:7090384/93‑1 (MQ=255)
  ggAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATc                                                                                       <  2:9296108/93‑1 (MQ=255)
   gAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCa                                                                                      <  2:6707056/93‑1 (MQ=255)
    aaTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAg                                                                                     <  1:6180160/93‑1 (MQ=255)
    aaTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAg                                                                                     <  1:725326/93‑1 (MQ=255)
    aaTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAg                                                                                     <  1:366923/93‑1 (MQ=255)
     aTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGt                                                                                    <  2:7915603/93‑1 (MQ=255)
     aTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGt                                                                                    <  2:3447462/93‑1 (MQ=255)
     aTAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGt                                                                                    <  1:2702967/93‑1 (MQ=255)
      tAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGta                                                                                   <  2:283402/93‑1 (MQ=255)
      aaaaGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGta                                                                                   <  2:5817747/92‑1 (MQ=255)
      aaaaGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGta                                                                                   <  1:4778105/92‑1 (MQ=255)
        aaGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGtatt                                                                                 <  2:1139194/93‑1 (MQ=255)
        aaGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGtatt                                                                                 <  1:9103854/93‑1 (MQ=255)
        aaGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGtatt                                                                                 <  2:5912902/93‑1 (MQ=255)
          aaaCGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGtattat                                                                               <  1:1049682/92‑1 (MQ=255)
            aCGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTg                                                                             <  1:2529714/93‑1 (MQ=255)
              gTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGAt                                                                           >  2:2664428/1‑93 (MQ=255)
              gTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGAt                                                                           <  2:4207428/93‑1 (MQ=255)
                tGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTa                                                                         <  1:2869060/93‑1 (MQ=255)
                tGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTa                                                                         <  1:5770223/93‑1 (MQ=255)
                 gAATCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTAt                                                                        <  2:306916/93‑1 (MQ=255)
                 gAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTAt                                                                        <  2:6093911/93‑1 (MQ=255)
                 gAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTAt                                                                        <  2:1944778/93‑1 (MQ=255)
                  aaGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATc                                                                       >  1:6028803/1‑93 (MQ=255)
                   aGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCa                                                                      <  1:4657009/93‑1 (MQ=255)
                    gCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCaa                                                                     <  2:10009963/93‑1 (MQ=255)
                     cTGCCATAACACACTGCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCaaa                                                                    <  1:1368745/93‑1 (MQ=255)
                     cTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCaaa                                                                    <  2:7119292/93‑1 (MQ=255)
                      tGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCaaaa                                                                   <  1:7790847/93‑1 (MQ=255)
                        ccATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAAtt                                                                 <  1:5798145/93‑1 (MQ=255)
                        ccATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAAtt                                                                 <  1:2036657/93‑1 (MQ=255)
                        ccATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATAAGTATTATTGATTATCAAAAtt                                                                 <  2:6408873/93‑1 (MQ=255)
                         cATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTa                                                                <  2:4779219/93‑1 (MQ=255)
                           tAACACGCGCCTGAAAGTGGAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAAt                                                              <  2:2304374/93‑1 (MQ=255)
                           tAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAAt                                                              <  2:1362672/93‑1 (MQ=255)
                              cacacTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCta                                                           <  1:7443365/93‑1 (MQ=255)
                                 gcTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCtaata                                                        <  1:8366892/92‑1 (MQ=255)
                                  cTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCtaataa                                                       <  1:5293722/93‑1 (MQ=255)
                                   tCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATaaa                                                      <  2:4614683/93‑1 (MQ=255)
                                     cTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATaaaaa                                                    <  2:2013401/93‑1 (MQ=255)
                                       gAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGc                                                  <  1:3375795/93‑1 (MQ=255)
                                        aaaGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGca                                                 <  2:9158203/93‑1 (MQ=255)
                                         aaGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGcac                                                <  2:8614879/93‑1 (MQ=255)
                                         aaGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGcac                                                <  1:2647845/93‑1 (MQ=255)
                                           gtgtAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACAt                                              <  1:4886708/93‑1 (MQ=255)
                                           gtgtAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACAt                                              <  2:5139283/93‑1 (MQ=255)
                                            tgtAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACAtt                                             <  2:289349/93‑1 (MQ=255)
                                             gtAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTg                                            <  1:7373519/93‑1 (MQ=255)
                                                 aaaaGGGCGGGCAGCTTACTGAGGATTTGCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTAtt                                        <  1:8210712/93‑1 (MQ=255)
                                                  aaaGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTc                                       >  1:5056804/1‑93 (MQ=255)
                                                   aaGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCa                                      <  2:7730334/93‑1 (MQ=255)
                                                   aaGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCa                                      <  2:9466218/93‑1 (MQ=255)
                                                   aaGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCa                                      <  2:2947477/93‑1 (MQ=255)
                                                     gggcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCAtt                                    <  1:3024203/93‑1 (MQ=255)
                                                     gggcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCAtt                                    <  2:7500012/93‑1 (MQ=255)
                                                      ggcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTa                                   <  2:8446002/93‑1 (MQ=255)
                                                      ggcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTa                                   <  1:3915128/93‑1 (MQ=255)
                                                      ggcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTa                                   <  1:7965299/93‑1 (MQ=255)
                                                       gcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTaa                                  <  1:3211074/93‑1 (MQ=255)
                                                       gcgggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTaa                                  <  2:4009038/93‑1 (MQ=255)
                                                         gggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAAc                                <  2:8776557/93‑1 (MQ=255)
                                                         gggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAAc                                <  1:921199/93‑1 (MQ=255)
                                                          ggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACa                               >  2:5242097/1‑93 (MQ=255)
                                                          ggcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACa                               <  1:6884681/93‑1 (MQ=255)
                                                           gcAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACaa                              <  1:5209267/93‑1 (MQ=255)
                                                             aGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAAtg                            <  1:7058358/93‑1 (MQ=255)
                                                              gCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAAtgt                           <  1:6492831/93‑1 (MQ=255)
                                                                  aCTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCtt                       <  1:6735745/93‑1 (MQ=255)
                                                                    tGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCtttt                     <  1:9309542/93‑1 (MQ=255)
                                                                    tGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCtttt                     <  2:6315666/93‑1 (MQ=255)
                                                                     gAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCttttt                    <  1:8606836/93‑1 (MQ=255)
                                                                        gATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTa                 <  1:1867561/93‑1 (MQ=255)
                                                                          ttttCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTaaa               <  1:6382744/93‑1 (MQ=255)
                                                                          ttttCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTaaa               <  2:5659517/93‑1 (MQ=255)
                                                                            ttCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAAtt             <  2:664206/93‑1 (MQ=255)
                                                                            ttCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAAtt             <  2:9915208/93‑1 (MQ=255)
                                                                            ttCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAAtt             <  2:2393890/93‑1 (MQ=255)
                                                                             tCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTc            <  2:1794118/93‑1 (MQ=255)
                                                                               aTTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCAt          <  1:225256/93‑1 (MQ=255)
                                                                               aTTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCAt          <  1:235662/93‑1 (MQ=255)
                                                                               aTTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCAt          <  1:5509481/93‑1 (MQ=255)
                                                                                ttCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATa         <  2:5432981/93‑1 (MQ=255)
                                                                                ttCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATa         <  2:7317557/93‑1 (MQ=255)
                                                                                ttCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATa         <  1:7152115/93‑1 (MQ=255)
                                                                                 tCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATaa        >  1:9884708/1‑93 (MQ=255)
                                                                                 tCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATaa        <  2:7634197/93‑1 (MQ=255)
                                                                                 tCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATaa        >  2:1467791/1‑93 (MQ=255)
                                                                                  cGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAg       <  1:9744293/93‑1 (MQ=255)
                                                                                   gAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGa      <  2:3942035/93‑1 (MQ=255)
                                                                                   gAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGa      <  1:4234904/93‑1 (MQ=255)
                                                                                   gAAAATACGATCAGTATTATTGATTATCAAAATTAAGCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGa      <  1:4147398/93‑1 (MQ=255)
                                                                                    aaaaTACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGaa     <  1:1299462/93‑1 (MQ=255)
                                                                                      aaTACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGAAtt   <  1:4523870/93‑1 (MQ=255)
                                                                                       atacGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGAAttt  <  2:8057509/93‑1 (MQ=255)
                                                                                          |                                                                                         
AAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATATGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTAAATTCATAAGAATTT  >  NC_000913/3755427‑3755606

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 230 total aligned reads displayed.
CAGAAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATATGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAATTTTGT  >  NC_000913/3755424‑3755609
                                                                                             |                                                                                             
CAGAAGGAATAAAGAACGTTGAAGCTGCCATAACACTCTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATAC                                                                                               <  SRR4302540.2771045/94‑1 (MQ=60)
CAGAAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATAC                                                                                               <  SRR4302540.8626435/94‑1 (MQ=60)
CAGAAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATAC                                                                                               <  SRR4302540.945689/94‑1 (MQ=60)
CAGAAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATAC                                                                                               <  SRR4302540.9659027/94‑1 (MQ=60)
CAGAAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATAC                                                                                               <  SRR4302540.8675694/94‑1 (MQ=60)
CAGAAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATAC                                                                                               <  SRR4302540.4103217/94‑1 (MQ=60)
CAGAAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATAC                                                                                               <  SRR4302540.1865721/94‑1 (MQ=60)
CAGAAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATAC                                                                                               <  SRR4302540.1588893/94‑1 (MQ=60)
 AGAAGGAATAAAGATCGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACG                                                                                              <  SRR4302540.7815354/94‑1 (MQ=60)
 AGAAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACG                                                                                              <  SRR4302540.6260157/94‑1 (MQ=60)
  ggaggaaaaaagaaacgtgaaaCTGCCCTAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGA                                                                                             <  SRR4302540.5167553/72‑1 (MQ=60)
  AAAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGA                                                                                             <  SRR4302540.8244906/94‑1 (MQ=60)
   AAGGAATAAAGAACGTTGAAGCTTCCATAACACCCTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGAT                                                                                            <  SRR4302540.9047290/94‑1 (MQ=60)
   AAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGAT                                                                                            <  SRR4302540.9047289/94‑1 (MQ=60)
   AAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGAT                                                                                            <  SRR4302540.4828324/94‑1 (MQ=60)
   AAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGAT                                                                                            <  SRR4302540.8420899/94‑1 (MQ=60)
    AGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATC                                                                                           <  SRR4302540.8277527/94‑1 (MQ=60)
    AGAAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGTGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATC                                                                                           <  SRR4302540.1115598/94‑1 (MQ=60)
    ACGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATC                                                                                           <  SRR4302540.9596469/94‑1 (MQ=60)
     GGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCA                                                                                          <  SRR4302540.4227844/94‑1 (MQ=60)
     GGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCA                                                                                          <  SRR4302540.7335062/94‑1 (MQ=60)
     AGAATAAAGAACAGTGAACCTCCCATAACACACTCCGGAAAGTGTAAAAAAGGGCGGACAGCTTACTGACGAGTTGCATTCGAAAATGCGATCA                                                                                          <  SRR4302540.4227845/94‑1 (MQ=36)
      GAATAAAGACCGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAG                                                                                         <  SRR4302540.5786840/94‑1 (MQ=60)
      GAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAG                                                                                         <  SRR4302540.7187767/94‑1 (MQ=60)
      GAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAG                                                                                         <  SRR4302540.9554275/94‑1 (MQ=60)
      GAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAG                                                                                         >  SRR4302540.5069042/1‑94 (MQ=60)
      GAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAG                                                                                         <  SRR4302540.1377967/94‑1 (MQ=60)
      GAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAG                                                                                         <  SRR4302540.7521732/94‑1 (MQ=60)
       AATAAAGACCGTTGAACCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGT                                                                                        <  SRR4302540.988373/94‑1 (MQ=60)
       AATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGT                                                                                        <  SRR4302540.370701/94‑1 (MQ=60)
       AATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGT                                                                                        <  SRR4302540.733094/94‑1 (MQ=60)
       AATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGT                                                                                        <  SRR4302540.6249002/94‑1 (MQ=60)
       AATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGT                                                                                        >  SRR4302540.4682459/1‑94 (MQ=60)
        ATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTA                                                                                       <  SRR4302540.2732129/94‑1 (MQ=60)
        ATAAAAAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTA                                                                                       <  SRR4302540.484436/94‑1 (MQ=60)
         TAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTAT                                                                                      <  SRR4302540.3764786/94‑1 (MQ=60)
         AAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTAT                                                                                      <  SRR4302540.4829155/94‑1 (MQ=60)
         AAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTAT                                                                                      <  SRR4302540.3006319/94‑1 (MQ=60)
          AAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATT                                                                                     <  SRR4302540.6612332/94‑1 (MQ=60)
           AAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTA                                                                                    <  SRR4302540.9213250/94‑1 (MQ=60)
           AAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTA                                                                                    <  SRR4302540.3732244/94‑1 (MQ=60)
           AAAAACGTTGAACCTGCCATACCACACTCCAGAAAGTGAAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTA                                                                                    <  SRR4302540.1929910/94‑1 (MQ=60)
            AGACCGTAGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTAT                                                                                   <  SRR4302540.5762100/94‑1 (MQ=60)
            AGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTAT                                                                                   <  SRR4302540.6152319/94‑1 (MQ=60)
             GAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATT                                                                                  <  SRR4302540.4653463/94‑1 (MQ=60)
             GAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATT                                                                                  <  SRR4302540.9271237/94‑1 (MQ=60)
             AAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATT                                                                                  <  SRR4302540.1060361/94‑1 (MQ=60)
              AACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTG                                                                                 <  SRR4302540.6830072/94‑1 (MQ=60)
               ACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGA                                                                                <  SRR4302540.2557011/94‑1 (MQ=60)
                 GTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATT                                                                              <  SRR4302540.4863178/94‑1 (MQ=60)
                 GTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATT                                                                              <  SRR4302540.2512998/94‑1 (MQ=60)
                  TTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATATGATCAGTATTATTGATTA                                                                             <  SRR4302540.2454903/94‑1 (MQ=60)
                  TTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTA                                                                             <  SRR4302540.6421348/94‑1 (MQ=60)
                  TGGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTA                                                                             <  SRR4302540.785633/94‑1 (MQ=60)
                   TGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTAT                                                                            <  SRR4302540.2900214/94‑1 (MQ=60)
                   TGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTAT                                                                            <  SRR4302540.5157240/94‑1 (MQ=60)
                   TGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTAT                                                                            <  SRR4302540.5833955/94‑1 (MQ=60)
                    GAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATC                                                                           <  SRR4302540.7868688/94‑1 (MQ=60)
                    GAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATC                                                                           >  SRR4302540.6095701/1‑94 (MQ=60)
                    GAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATC                                                                           <  SRR4302540.1762494/94‑1 (MQ=60)
                     AAGCTGCCATAACACACTCCTGAAAGTGTGAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCA                                                                          <  SRR4302540.7886980/94‑1 (MQ=60)
                     AAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCA                                                                          <  SRR4302540.3503554/94‑1 (MQ=60)
                      AGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAA                                                                         <  SRR4302540.4706850/94‑1 (MQ=60)
                       GCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAA                                                                        <  SRR4302540.881207/94‑1 (MQ=60)
                       GCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAA                                                                        <  SRR4302540.3275919/94‑1 (MQ=60)
                        CTTCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAA                                                                       <  SRR4302540.3940474/94‑1 (MQ=60)
                        CTGCCATAACACACTGCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAA                                                                       <  SRR4302540.1383242/94‑1 (MQ=60)
                         TGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAAT                                                                      <  SRR4302540.7881917/94‑1 (MQ=60)
                           CCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTA                                                                    <  SRR4302540.2058615/94‑1 (MQ=60)
                           CCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTA                                                                    <  SRR4302540.5862216/94‑1 (MQ=60)
                            CATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAA                                                                   <  SRR4302540.924899/94‑1 (MQ=60)
                             ATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAAT                                                                  <  SRR4302540.800567/94‑1 (MQ=60)
                             ATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAAT                                                                  <  SRR4302540.2802357/94‑1 (MQ=60)
                              TAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATC                                                                 <  SRR4302540.5058900/94‑1 (MQ=60)
                              TAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATC                                                                 >  SRR4302540.7279674/1‑94 (MQ=60)
                              TAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATC                                                                 <  SRR4302540.2666415/94‑1 (MQ=60)
                               AACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCT                                                                <  SRR4302540.2658042/94‑1 (MQ=60)
                                ACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTA                                                               <  SRR4302540.4290530/94‑1 (MQ=60)
                                ACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTA                                                               <  SRR4302540.5118679/94‑1 (MQ=60)
                                ACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTA                                                               <  SRR4302540.6733354/94‑1 (MQ=60)
                                 CACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAA                                                              <  SRR4302540.5309136/94‑1 (MQ=60)
                                 CACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAA                                                              <  SRR4302540.7526294/94‑1 (MQ=60)
                                 CACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAA                                                              <  SRR4302540.6235492/94‑1 (MQ=60)
                                 CACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAA                                                              <  SRR4302540.7526295/94‑1 (MQ=60)
                                  ACGCTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAAT                                                             <  SRR4302540.10047986/94‑1 (MQ=60)
                                  ACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAAT                                                             <  SRR4302540.3964957/94‑1 (MQ=60)
                                  ACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAAT                                                             <  SRR4302540.10047987/94‑1 (MQ=60)
                                   CACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATA                                                            <  SRR4302540.5915185/94‑1 (MQ=60)
                                   CACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATA                                                            <  SRR4302540.9363695/94‑1 (MQ=60)
                                    ACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAA                                                           <  SRR4302540.494632/94‑1 (MQ=60)
                                    ACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAA                                                           <  SRR4302540.6087931/94‑1 (MQ=60)
                                     CTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAA                                                          >  SRR4302540.8421416/1‑94 (MQ=60)
                                     CTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAA                                                          <  SRR4302540.5351607/94‑1 (MQ=60)
                                      TCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAA                                                         <  SRR4302540.2105158/94‑1 (MQ=60)
                                       CCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAA                                                        <  SRR4302540.131736/94‑1 (MQ=60)
                                       CCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAA                                                        <  SRR4302540.131737/94‑1 (MQ=60)
                                         TGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGC                                                      <  SRR4302540.9301572/94‑1 (MQ=60)
                                          GAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCA                                                     <  SRR4302540.3412680/94‑1 (MQ=60)
                                           AAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCAC                                                    <  SRR4302540.3099465/94‑1 (MQ=60)
                                           AAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCAC                                                    <  SRR4302540.969497/94‑1 (MQ=60)
                                           AAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCAC                                                    <  SRR4302540.5851903/94‑1 (MQ=60)
                                            AAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACA                                                   <  SRR4302540.2676569/94‑1 (MQ=60)
                                            AAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACA                                                   <  SRR4302540.8236253/94‑1 (MQ=60)
                                            AAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACA                                                   <  SRR4302540.7418849/94‑1 (MQ=60)
                                            AAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACA                                                   <  SRR4302540.2676568/94‑1 (MQ=60)
                                             AGGGTAAAAAAGGGCGGGCAGCGTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACAT                                                  <  SRR4302540.1115969/94‑1 (MQ=60)
                                              GTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATT                                                 <  SRR4302540.4787941/94‑1 (MQ=60)
                                              GTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATT                                                 <  SRR4302540.2739985/94‑1 (MQ=60)
                                              GTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATT                                                 <  SRR4302540.4939214/94‑1 (MQ=60)
                                               TGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTG                                                <  SRR4302540.6189323/94‑1 (MQ=60)
                                               TGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTG                                                <  SRR4302540.1545958/94‑1 (MQ=60)
                                                GTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGT                                               <  SRR4302540.7455702/94‑1 (MQ=60)
                                                GTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGT                                               <  SRR4302540.8032988/94‑1 (MQ=60)
                                                 TAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTA                                              <  SRR4302540.4257233/94‑1 (MQ=60)
                                                  AAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTAT                                             <  SRR4302540.7316864/94‑1 (MQ=60)
                                                  AAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTAT                                             <  SRR4302540.10000264/94‑1 (MQ=60)
                                                  AAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTAT                                             <  SRR4302540.2230890/94‑1 (MQ=60)
                                                   AAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATT                                            <  SRR4302540.9534866/94‑1 (MQ=60)
                                                   AAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATT                                            <  SRR4302540.3152794/94‑1 (MQ=60)
                                                    AAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTC                                           <  SRR4302540.8879022/94‑1 (MQ=60)
                                                    AAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTC                                           >  SRR4302540.5111474/1‑94 (MQ=60)
                                                    AAAAGGGCGGGCAGCTTACTGAGGATTTGCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTC                                           <  SRR4302540.8306145/94‑1 (MQ=60)
                                                     AAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCA                                          <  SRR4302540.5721333/94‑1 (MQ=60)
                                                        GGGCGGGCAGCTTACTGATGATTTTCATTCGAAACTACGATCAGTATTATTGCTTATCAAAATTAATCTACTAAAAAGCACATTGTATTCATTA                                       <  SRR4302540.5374086/94‑1 (MQ=60)
                                                        GGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTA                                       <  SRR4302540.3057427/94‑1 (MQ=60)
                                                        GGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTA                                       <  SRR4302540.7202915/94‑1 (MQ=60)
                                                         GGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAA                                      <  SRR4302540.8058130/94‑1 (MQ=60)
                                                         GGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAA                                      <  SRR4302540.2306860/94‑1 (MQ=60)
                                                         GGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAA                                      <  SRR4302540.3957530/94‑1 (MQ=60)
                                                         GGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAA                                      <  SRR4302540.3977716/94‑1 (MQ=60)
                                                         GGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAA                                      <  SRR4302540.8585030/94‑1 (MQ=60)
                                                          GCGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAA                                     <  SRR4302540.3245931/94‑1 (MQ=60)
                                                           CGGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAAC                                    <  SRR4302540.6377016/94‑1 (MQ=60)
                                                            GGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACA                                   <  SRR4302540.8630570/94‑1 (MQ=60)
                                                            GGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACA                                   <  SRR4302540.2693321/94‑1 (MQ=60)
                                                            GGGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACA                                   <  SRR4302540.930917/94‑1 (MQ=60)
                                                             GGCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAA                                  <  SRR4302540.6961002/94‑1 (MQ=60)
                                                              GCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAAT                                 <  SRR4302540.7155415/94‑1 (MQ=60)
                                                              GCAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAAT                                 <  SRR4302540.7472807/94‑1 (MQ=60)
                                                               CAGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATG                                <  SRR4302540.9541378/94‑1 (MQ=60)
                                                                AGCTTACTGAGGATTTTCATTCGAAAATATGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGT                               <  SRR4302540.7115472/94‑1 (MQ=60)
                                                                AGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGT                               <  SRR4302540.7136853/94‑1 (MQ=60)
                                                                AGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGT                               <  SRR4302540.9327547/94‑1 (MQ=60)
                                                                AGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGT                               <  SRR4302540.5120889/94‑1 (MQ=60)
                                                                AGCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGT                               <  SRR4302540.5281934/94‑1 (MQ=60)
                                                                 GCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTG                              <  SRR4302540.6565038/94‑1 (MQ=60)
                                                                 GCTTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTG                              <  SRR4302540.7063663/94‑1 (MQ=60)
                                                                   TTACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑T                           <  SRR4302540.2989691/94‑1 (MQ=60)
                                                                     ACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTT                         >  SRR4302540.7316246/1‑94 (MQ=60)
                                                                     ACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTT                         <  SRR4302540.6810137/94‑1 (MQ=60)
                                                                     ACTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTT                         <  SRR4302540.4880053/94‑1 (MQ=60)
                                                                      CTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTT                        <  SRR4302540.6516053/94‑1 (MQ=60)
                                                                      CTGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTT                        <  SRR4302540.8584452/94‑1 (MQ=60)
                                                                       TGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTT                       >  SRR4302540.9895676/1‑94 (MQ=60)
                                                                       TGAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTT                       <  SRR4302540.9420688/94‑1 (MQ=60)
                                                                        GAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTT                      <  SRR4302540.8706845/94‑1 (MQ=60)
                                                                        GAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTT                      <  SRR4302540.6853384/94‑1 (MQ=60)
                                                                        GAGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATATGC‑TTTTTT                      <  SRR4302540.6828021/94‑1 (MQ=60)
                                                                         AGGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTT                     <  SRR4302540.458926/94‑1 (MQ=60)
                                                                          GGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTA                    <  SRR4302540.9897658/94‑1 (MQ=60)
                                                                          GGATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTA                    <  SRR4302540.6462283/94‑1 (MQ=60)
                                                                           GATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAA                   <  SRR4302540.1888027/94‑1 (MQ=60)
                                                                            ATTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAA                  <  SRR4302540.4407363/94‑1 (MQ=60)
                                                                             TTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAAT                 <  SRR4302540.8338596/94‑1 (MQ=60)
                                                                             TTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAAT                 <  SRR4302540.6453800/94‑1 (MQ=60)
                                                                             TTTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAAT                 <  SRR4302540.2617315/94‑1 (MQ=60)
                                                                              TTTCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATT                <  SRR4302540.1989511/94‑1 (MQ=60)
                                                                               TGCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTC               <  SRR4302540.310013/94‑1 (MQ=60)
                                                                                TCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGCTTTTTTTTAAATTC               <  SRR4302540.2802361/94‑1 (MQ=60)
                                                                                TCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCA              <  SRR4302540.2169132/94‑1 (MQ=60)
                                                                                TCATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCA              <  SRR4302540.5487910/94‑1 (MQ=60)
                                                                                  ATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATA            <  SRR4302540.227433/94‑1 (MQ=60)
                                                                                  ATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATA            <  SRR4302540.237946/94‑1 (MQ=60)
                                                                                  ATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATA            <  SRR4302540.5570159/94‑1 (MQ=60)
                                                                                  ATTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATA            <  SRR4302540.237945/94‑1 (MQ=60)
                                                                                   TTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAA           <  SRR4302540.7231817/94‑1 (MQ=60)
                                                                                   TTCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAA           >  SRR4302540.10000128/1‑94 (MQ=60)
                                                                                    TCGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAG          <  SRR4302540.4116579/94‑1 (MQ=60)
                                                                                     CGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGA         <  SRR4302540.1753235/94‑1 (MQ=60)
                                                                                     CGAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGA         <  SRR4302540.9858655/94‑1 (MQ=60)
                                                                                      GAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAA        <  SRR4302540.4192289/94‑1 (MQ=60)
                                                                                      GAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAA        <  SRR4302540.3489715/94‑1 (MQ=60)
                                                                                      GAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAA        <  SRR4302540.4280986/94‑1 (MQ=60)
                                                                                      GAAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAA        <  SRR4302540.5955739/94‑1 (MQ=60)
                                                                                       AAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAAT       <  SRR4302540.1312932/94‑1 (MQ=60)
                                                                                       AAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAAT       <  SRR4302540.3700582/94‑1 (MQ=60)
                                                                                       AAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAAT       <  SRR4302540.227702/94‑1 (MQ=60)
                                                                                       AAAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAAT       <  SRR4302540.9833979/94‑1 (MQ=60)
                                                                                        AAATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAATT      <  SRR4302540.5315831/94‑1 (MQ=60)
                                                                                         AATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAATTT     <  SRR4302540.4572860/94‑1 (MQ=60)
                                                                                         AATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAATTT     <  SRR4302540.8640388/94‑1 (MQ=60)
                                                                                          ATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAATTTT    <  SRR4302540.5850439/94‑1 (MQ=60)
                                                                                          ATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAATTTT    <  SRR4302540.6556766/94‑1 (MQ=60)
                                                                                          ATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAATTTT    <  SRR4302540.3355462/94‑1 (MQ=60)
                                                                                          ATACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAATTTT    <  SRR4302540.9146631/94‑1 (MQ=60)
                                                                                           TACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAATTTTG   <  SRR4302540.1925841/94‑1 (MQ=60)
                                                                                            ACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAATTTTGT  <  SRR4302540.6105392/94‑1 (MQ=60)
                                                                                            ACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAATTTTGT  <  SRR4302540.6105391/94‑1 (MQ=60)
                                                                                            ACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAATTTTGT  <  SRR4302540.8969618/94‑1 (MQ=60)
                                                                                            ACGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAATTTTGT  <  SRR4302540.7369462/94‑1 (MQ=60)
                                                                                             |                                                                                             
CAGAAGGAATAAAGAACGTTGAAGCTGCCATAACACACTCCTGAAAGTGTAAAAAAGGGCGGGCAGCTTACTGAGGATTTTCATTCGAAAATATGATCAGTATTATTGATTATCAAAATTAATCTAATAAAAAGCACATTGTATTCATTAAACAATGTGC‑TTTTTTTAAATTCATAAGAATTTTGT  >  NC_000913/3755424‑3755609

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑