Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,765,234	G→A	G129G (GGG→GGA)	yibJ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,765,234	0	G	A	100.0%	887.3 / NA	252	G129G (GGG→GGA)	yibJ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (142/110); total (142/110)

Only 100 of 257 total aligned reads displayed.

CGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCC  >  NC_000913/3765184‑3765323

cGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCg                                                 >  2:1422758/1‑93 (MQ=9)

  cTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGt                                               <  2:7095654/93‑1 (MQ=16)

  cTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGt                                               <  1:604541/93‑1 (MQ=16)

   tattatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTc                                              >  1:7480135/1‑93 (MQ=255)

   tattatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTc                                              >  2:6851274/1‑93 (MQ=255)

   tattatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTc                                              >  2:5721706/1‑93 (MQ=255)

    attatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCa                                             >  2:6535879/1‑93 (MQ=255)

     ttatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCAt                                            >  2:5226756/1‑93 (MQ=255)

     ttatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCAt                                            >  2:8596632/1‑93 (MQ=255)

      tatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATa                                           >  1:8360570/1‑93 (MQ=255)

      tatGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATa                                           <  2:3021041/93‑1 (MQ=255)

       atGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATaa                                          <  1:9907980/93‑1 (MQ=255)

        tGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATaaa                                         <  1:5597375/93‑1 (MQ=255)

        tGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATaaa                                         <  2:6754819/93‑1 (MQ=255)

        tGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATaaa                                         <  1:313134/93‑1 (MQ=255)

          aCCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATg                                       <  1:5082020/93‑1 (MQ=255)

          aCCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATg                                       >  1:6705936/1‑93 (MQ=255)

            ccgccgCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTa                                     >  2:7505403/1‑93 (MQ=255)

            ccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTa                                     >  1:490533/1‑93 (MQ=255)

            ccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTa                                     >  2:9150556/1‑93 (MQ=255)

            ccGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTa                                     <  1:6621204/93‑1 (MQ=255)

             cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAg                                    >  1:1412306/1‑93 (MQ=255)

             cGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAg                                    >  1:10006442/1‑93 (MQ=255)

              gctgctGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa                                   >  2:5382699/1‑93 (MQ=255)

              gctgctGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGa                                   <  2:60845/93‑1 (MQ=255)

               ctgctgGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGAt                                  <  2:4618133/93‑1 (MQ=255)

               ctgctgGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGAt                                  >  1:5364552/1‑93 (MQ=255)

                tGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATc                                 >  2:1142648/1‑93 (MQ=255)

                tGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATc                                 >  1:719781/1‑93 (MQ=255)

                 gctggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATcc                                >  1:9242994/4‑93 (MQ=255)

                 gctggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATcc                                >  1:9110956/4‑93 (MQ=255)

                 gctggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATcc                                >  1:8223459/4‑93 (MQ=255)

                 gctggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATcc                                <  1:8611505/90‑1 (MQ=255)

                 gctggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATcc                                >  1:2176701/4‑93 (MQ=255)

                 gctggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATcc                                <  1:2388951/90‑1 (MQ=255)

                  ctggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAGTTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCg                               <  2:9599579/91‑1 (MQ=255)

                   tggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCga                              >  1:886223/2‑92 (MQ=255)

                   tggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGc                              >  1:1288904/2‑93 (MQ=255)

                    ggggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCa                             <  2:3746757/93‑1 (MQ=255)

                     gggCGGTATATCCCTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCaa                            <  2:7868791/93‑1 (MQ=255)

                     gggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCaa                            >  1:122259/1‑93 (MQ=255)

                     gggCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCaa                            >  1:817786/1‑93 (MQ=255)

                       gCGGTATATCACTCAGGCTCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAgg                          <  1:8981911/93‑1 (MQ=255)

                       gCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAgg                          >  2:6303125/1‑93 (MQ=255)

                        cGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGt                         <  1:383434/93‑1 (MQ=255)

                        cGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGt                         <  2:4885678/93‑1 (MQ=255)

                         ggTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGtt                        >  1:3614276/1‑93 (MQ=255)

                         ggTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGtt                        >  1:932591/1‑93 (MQ=255)

                         ggTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGtt                        <  1:4239811/93‑1 (MQ=255)

                         ggTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGtt                        >  2:4395765/1‑93 (MQ=255)

                           tataTCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTg                      >  1:198044/1‑93 (MQ=255)

                           tataTCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTg                      <  1:8835495/93‑1 (MQ=255)

                           tataTCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTg                      >  1:2555912/1‑93 (MQ=255)

                            atatCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTgg                     >  2:3538375/1‑93 (MQ=255)

                            atatCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTgg                     >  2:3877732/1‑93 (MQ=255)

                             tatCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATTAATGTAGATCCGCAAGGTTTGGt                    >  2:5520370/1‑93 (MQ=255)

                             tatCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGt                    >  2:7150743/1‑93 (MQ=255)

                             tatCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGt                    >  2:6677775/1‑93 (MQ=255)

                              atCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGtt                   >  2:7994607/1‑93 (MQ=255)

                              atCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGtt                   <  1:9833308/93‑1 (MQ=255)

                              atCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGtt                   >  1:2450998/1‑93 (MQ=255)

                                cACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGa                 <  1:1897848/93‑1 (MQ=255)

                                 aCTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGat                >  2:1705479/1‑93 (MQ=255)

                                  cTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGata               >  2:7881853/1‑93 (MQ=255)

                                   tCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGatat              <  1:3710855/93‑1 (MQ=255)

                                    cAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGAtata             >  1:1523502/1‑93 (MQ=255)

                                    cAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGAtata             >  1:7816195/1‑93 (MQ=255)

                                     aGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATaa            >  2:3506530/1‑93 (MQ=255)

                                     aGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATaa            >  2:3688817/1‑93 (MQ=255)

                                      ggATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATaat           >  1:8017522/1‑92 (MQ=255)

                                      ggATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATaaa           >  2:2306919/1‑93 (MQ=255)

                                      ggATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATaaa           <  1:459305/93‑1 (MQ=255)

                                      ggATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATaaa           <  1:9088806/93‑1 (MQ=255)

                                      ggATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATaaa           <  1:6362002/93‑1 (MQ=255)

                                      ggATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATaaa           <  1:6514107/93‑1 (MQ=255)

                                       gATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAt          <  1:5032947/93‑1 (MQ=255)

                                          ccGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTta       <  1:3494880/93‑1 (MQ=255)

                                          ccGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTta       <  1:6174233/93‑1 (MQ=255)

                                          ccGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTta       <  1:6539113/93‑1 (MQ=255)

                                          ccGAGTGGACCGAAGGGGGGATGAAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTta       <  2:7740908/93‑1 (MQ=25)

                                           cGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTTGTTGATATAAATTtat      >  2:5438569/1‑93 (MQ=255)

                                            gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtatc     >  1:6880864/1‑92 (MQ=255)

                                            gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata     <  2:7467475/93‑1 (MQ=255)

                                            gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata     <  2:8176433/93‑1 (MQ=255)

                                            gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata     <  1:10027368/93‑1 (MQ=255)

                                            gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata     <  2:5094442/93‑1 (MQ=255)

                                            gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata     <  2:2913605/93‑1 (MQ=255)

                                            gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata     >  2:2646595/1‑93 (MQ=255)

                                            gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata     <  2:2529871/93‑1 (MQ=255)

                                            gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata     <  2:2034569/93‑1 (MQ=255)

                                            gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata     <  2:192804/93‑1 (MQ=255)

                                            gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata     >  2:1758501/1‑93 (MQ=255)

                                            gATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata     <  1:8501320/93‑1 (MQ=255)

                                            gATTGGACTGAAGGGGGGATGGAATTTTGATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTtata     <  2:6638218/93‑1 (MQ=255)

                                             aTTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAc    <  2:3463800/93‑1 (MQ=255)

                                             aTTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAc    <  1:2859453/93‑1 (MQ=255)

                                             aTTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTGTGGTTGATATAAATTTATAc    >  2:3868456/1‑93 (MQ=255)

                                               tGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAccc  <  2:4175633/93‑1 (MQ=255)

                                               tGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAccc  <  1:9642879/93‑1 (MQ=255)

                                               tGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAccc  <  1:3332262/93‑1 (MQ=255)

CGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCC  >  NC_000913/3765184‑3765323

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 249 total aligned reads displayed.

GCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGA  >  NC_000913/3765141‑3765326

TCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGA                                                                                              <  SRR4302540.4375213/94‑1 (MQ=0)

GCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGA                                                                                              <  SRR4302540.8906072/94‑1 (MQ=0)

 CAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGAC                                                                                             >  SRR4302540.8123927/1‑94 (MQ=0)

 CAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGAC                                                                                             <  SRR4302540.1284266/94‑1 (MQ=0)

 CAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGC                                                                                             >  SRR4302540.1460799/1‑94 (MQ=0)

  AGCAGTATTATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACT                                                                                            <  SRR4302540.8447086/94‑1 (MQ=0)

  AGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACT                                                                                            <  SRR4302540.3401731/94‑1 (MQ=0)

   GCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTG                                                                                           >  SRR4302540.7752839/1‑94 (MQ=0)

   GCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTG                                                                                           <  SRR4302540.1729880/94‑1 (MQ=0)

    CAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGA                                                                                          >  SRR4302540.60318/1‑94 (MQ=0)

    CAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGA                                                                                          <  SRR4302540.4000266/94‑1 (MQ=0)

     AGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAA                                                                                         <  SRR4302540.3858917/94‑1 (MQ=0)

     AGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAA                                                                                         <  SRR4302540.5586437/94‑1 (MQ=0)

     AGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAA                                                                                         >  SRR4302540.6001909/1‑94 (MQ=0)

      GTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAG                                                                                        >  SRR4302540.1424787/1‑94 (MQ=0)

       TATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAACG                                                                                       >  SRR4302540.1401245/1‑94 (MQ=0)

       TATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGG                                                                                       >  SRR4302540.3777133/1‑94 (MQ=0)

       TATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGG                                                                                       >  SRR4302540.4829164/1‑94 (MQ=0)

       TATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGG                                                                                       <  SRR4302540.7570529/94‑1 (MQ=0)

       GATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGG                                                                                       <  SRR4302540.1818170/94‑1 (MQ=0)

        tggcTGAGGAGTCCCGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGG                                                                                      <  SRR4302540.1741575/90‑1 (MQ=0)

        ATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGG                                                                                      <  SRR4302540.5225785/94‑1 (MQ=0)

        ATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGG                                                                                      >  SRR4302540.3172844/1‑94 (MQ=0)

         TGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGG                                                                                     >  SRR4302540.7506720/1‑94 (MQ=0)

         TGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGG                                                                                     >  SRR4302540.1156780/1‑94 (MQ=0)

          GATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGG                                                                                    >  SRR4302540.1755386/1‑94 (MQ=0)

           ATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGG                                                                                   >  SRR4302540.5808065/1‑94 (MQ=0)

           ATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGCATATCACTCAGGATCCGATTGGGCTGAAGGGGGG                                                                                   >  SRR4302540.82425/1‑94 (MQ=0)

             GAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGAT                                                                                 <  SRR4302540.8533684/94‑1 (MQ=0)

               GGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATGCGATTGGGCTGAAGGGGGGATGG                                                                               <  SRR4302540.6868610/94‑1 (MQ=0)

                GAGTCCGGCCTGTATTACACCCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGA                                                                              <  SRR4302540.2954482/94‑1 (MQ=0)

                GAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGA                                                                              >  SRR4302540.4073380/1‑94 (MQ=0)

                GAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGGATATCAGTCAGGATCCGATTGGACTGAAGGGGGGATGGA                                                                              >  SRR4302540.1676332/1‑94 (MQ=0)

                  GTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAAT                                                                            >  SRR4302540.5606092/1‑94 (MQ=0)

                  GTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAAT                                                                            >  SRR4302540.1722557/1‑94 (MQ=0)

                      GGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTT                                                                        >  SRR4302540.3169339/1‑94 (MQ=0)

                      GGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTT                                                                        >  SRR4302540.5024295/1‑94 (MQ=0)

                      GGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTT                                                                        >  SRR4302540.4376215/1‑94 (MQ=0)

                      GGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTT                                                                        >  SRR4302540.2581971/1‑94 (MQ=0)

                       GCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTA                                                                       >  SRR4302540.7615476/1‑94 (MQ=0)

                       GCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTA                                                                       >  SRR4302540.6011130/1‑94 (MQ=0)

                        CCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTAT                                                                      <  SRR4302540.1319431/94‑1 (MQ=0)

                        CCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTAT                                                                      >  SRR4302540.6907752/1‑94 (MQ=0)

                         CTGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATC                                                                     >  SRR4302540.4791017/1‑94 (MQ=0)

                         CTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATC                                                                     >  SRR4302540.1795603/1‑94 (MQ=0)

                         CTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATC                                                                     >  SRR4302540.8181478/1‑94 (MQ=0)

                         CTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATC                                                                     >  SRR4302540.8958451/1‑94 (MQ=0)

                          TGTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCA                                                                    <  SRR4302540.8858206/94‑1 (MQ=0)

                          TGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCA                                                                    >  SRR4302540.5177223/1‑94 (MQ=0)

                          TGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCA                                                                    >  SRR4302540.3010182/1‑94 (MQ=0)

                          TGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCA                                                                    <  SRR4302540.4364183/94‑1 (MQ=0)

                          TGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTCGGCTGAAGGGGGGATGGAATTTTTATCA                                                                    >  SRR4302540.7994481/1‑94 (MQ=0)

                           GTATTACACCCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAG                                                                   <  SRR4302540.10154122/94‑1 (MQ=0)

                           GTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAG                                                                   >  SRR4302540.8013413/1‑94 (MQ=0)

                           GTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAG                                                                   >  SRR4302540.6745207/1‑94 (MQ=0)

                           GTATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAG                                                                   >  SRR4302540.9584205/1‑94 (MQ=0)

                           GTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAG                                                                   >  SRR4302540.9470551/1‑94 (MQ=0)

                           GTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAG                                                                   >  SRR4302540.8363913/1‑94 (MQ=0)

                            TATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGT                                                                  >  SRR4302540.2903675/1‑94 (MQ=0)

                            TATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGT                                                                  <  SRR4302540.7310764/94‑1 (MQ=0)

                             ATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTA                                                                 >  SRR4302540.9743544/1‑94 (MQ=0)

                             ATTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTA                                                                 <  SRR4302540.361431/94‑1 (MQ=0)

                              TTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTAT                                                                >  SRR4302540.2947768/1‑94 (MQ=0)

                              TTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTAT                                                                <  SRR4302540.2450775/94‑1 (MQ=0)

                              TTACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTAT                                                                >  SRR4302540.5172568/1‑94 (MQ=0)

                               TACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATC                                                               >  SRR4302540.1557824/1‑94 (MQ=0)

                               TACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATC                                                               <  SRR4302540.1231895/94‑1 (MQ=0)

                               TACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATC                                                               >  SRR4302540.8248241/1‑94 (MQ=0)

                                ACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGCAGGGGGGGTGGAGTTTTTATCAGTATCG                                                              >  SRR4302540.8729241/1‑94 (MQ=0)

                                ACAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCC                                                              <  SRR4302540.9321411/94‑1 (MQ=0)

                                 caagcgcgcCCGCTATTATGCCCCGCTGCACGGGCGCTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCG                                                             <  SRR4302540.259413/85‑1 (MQ=0)

                                 CAACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCG                                                             <  SRR4302540.8960300/94‑1 (MQ=0)

                                  AACCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGT                                                            >  SRR4302540.437996/1‑94 (MQ=0)

                                  AACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGT                                                            >  SRR4302540.1943982/1‑94 (MQ=0)

                                    CCGCCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTG                                                          >  SRR4302540.3493814/1‑94 (MQ=0)

                                       CCACCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAAT                                                       <  SRR4302540.6626445/94‑1 (MQ=0)

                                          CCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCG                                                    <  SRR4302540.6197268/94‑1 (MQ=0)

                                          CCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCG                                                    <  SRR4302540.5458003/94‑1 (MQ=0)

                                          CCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCG                                                    <  SRR4302540.9455388/94‑1 (MQ=0)

                                          CCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCG                                                    >  SRR4302540.6192070/1‑94 (MQ=0)

                                          CCGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCG                                                    <  SRR4302540.994264/94‑1 (MQ=0)

                                           CGCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGG                                                   <  SRR4302540.8283432/94‑1 (MQ=2)

                                            GCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGT                                                  <  SRR4302540.1684334/94‑1 (MQ=4)

                                            GCTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGT                                                  <  SRR4302540.8945173/94‑1 (MQ=4)

                                             CTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTC                                                 >  SRR4302540.2489957/1‑94 (MQ=7)

                                             CTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTC                                                 >  SRR4302540.7563616/1‑94 (MQ=7)

                                             CTATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTC                                                 <  SRR4302540.611010/94‑1 (MQ=7)

                                              TATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCA                                                >  SRR4302540.4631299/1‑94 (MQ=9)

                                               ATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCAT                                               <  SRR4302540.4966124/94‑1 (MQ=11)

                                               ATTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCAGTTGAATCCGGTCAT                                               >  SRR4302540.3662551/1‑94 (MQ=11)

                                                TTATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATA                                              >  SRR4302540.4936700/1‑94 (MQ=14)

                                                  ATGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAA                                            <  SRR4302540.10023715/94‑1 (MQ=22)

                                                   TGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAAT                                           >  SRR4302540.9694082/1‑94 (MQ=24)

                                                   TGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAAT                                           >  SRR4302540.1109545/1‑94 (MQ=24)

                                                   TGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAAT                                           <  SRR4302540.5658955/94‑1 (MQ=24)

                                                   TGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAAT                                           >  SRR4302540.9348842/1‑94 (MQ=24)

                                                   TGACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAAT                                           <  SRR4302540.316249/94‑1 (MQ=24)

                                                    GACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATG                                          >  SRR4302540.6779945/1‑94 (MQ=26)

                                                     ACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGT                                         <  SRR4302540.5136966/94‑1 (MQ=29)

                                                     ACCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATACGGTCTTAAATta                                         >  SRR4302540.7619990/1‑92 (MQ=1)

                                                      CCCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTA                                        >  SRR4302540.495786/1‑94 (MQ=31)

                                                       CCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAG                                       <  SRR4302540.8932787/94‑1 (MQ=34)

                                                       CCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAG                                       >  SRR4302540.10122982/1‑94 (MQ=34)

                                                       CCGCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAG                                       >  SRR4302540.257082/1‑94 (MQ=34)

                                                         GCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGAT                                     >  SRR4302540.5423482/1‑94 (MQ=39)

                                                         GCTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGAT                                     <  SRR4302540.724612/94‑1 (MQ=39)

                                                          CTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATC                                    <  SRR4302540.3273928/94‑1 (MQ=41)

                                                          CTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATC                                    >  SRR4302540.727499/1‑94 (MQ=41)

                                                          CTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATC                                    >  SRR4302540.8590843/1‑94 (MQ=41)

                                                          CTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATC                                    >  SRR4302540.6670166/1‑94 (MQ=41)

                                                          CTGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATC                                    <  SRR4302540.9160987/94‑1 (MQ=41)

                                                           TGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCC                                   >  SRR4302540.9220453/1‑94 (MQ=44)

                                                           TGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCC                                   >  SRR4302540.7544517/1‑94 (MQ=44)

                                                           TGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCC                                   >  SRR4302540.8319059/1‑94 (MQ=44)

                                                           TGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCC                                   >  SRR4302540.2200177/1‑94 (MQ=44)

                                                           TGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCC                                   >  SRR4302540.9353692/1‑94 (MQ=44)

                                                           TGCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCC                                   >  SRR4302540.9175848/1‑94 (MQ=44)

                                                            GCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCG                                  <  SRR4302540.2414700/94‑1 (MQ=47)

                                                            GCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCG                                  <  SRR4302540.6240549/94‑1 (MQ=47)

                                                            GCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCG                                  <  SRR4302540.6908457/94‑1 (MQ=47)

                                                            GCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCG                                  <  SRR4302540.8711563/94‑1 (MQ=47)

                                                            GCTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCG                                  >  SRR4302540.2137719/1‑94 (MQ=47)

                                                             CTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGC                                 >  SRR4302540.1302218/1‑94 (MQ=49)

                                                             CTGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGA                                 >  SRR4302540.895625/1‑94 (MQ=47)

                                                              TGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCA                                >  SRR4302540.3097599/1‑94 (MQ=52)

                                                              TGGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCA                                <  SRR4302540.6745623/94‑1 (MQ=52)

                                                               GGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAA                               <  SRR4302540.9378000/94‑1 (MQ=55)

                                                               GGGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAA                               >  SRR4302540.826475/1‑94 (MQ=55)

                                                                GGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAG                              >  SRR4302540.3872225/1‑94 (MQ=58)

                                                                GGGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAG                              <  SRR4302540.2111557/94‑1 (MQ=58)

                                                                 GGCGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGG                             >  SRR4302540.3432402/1‑94 (MQ=60)

                                                                  GCGGTATATCACTCAGGCTCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGT                            <  SRR4302540.9089019/94‑1 (MQ=60)

                                                                   CGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTT                           <  SRR4302540.8387580/94‑1 (MQ=60)

                                                                   CGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTT                           <  SRR4302540.387395/94‑1 (MQ=60)

                                                                   CGGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTT                           >  SRR4302540.942384/1‑94 (MQ=60)

                                                                    GGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTT                          <  SRR4302540.3471462/94‑1 (MQ=60)

                                                                    GGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTT                          <  SRR4302540.4285939/94‑1 (MQ=60)

                                                                    GGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTT                          >  SRR4302540.1250851/1‑94 (MQ=60)

                                                                    GGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTT                          >  SRR4302540.3605750/1‑94 (MQ=60)

                                                                    GGTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTT                          >  SRR4302540.5114854/1‑94 (MQ=60)

                                                                     GTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTG                         >  SRR4302540.200005/1‑94 (MQ=60)

                                                                     GTATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTG                         >  SRR4302540.8214727/1‑94 (MQ=60)

                                                                      TATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGG                        <  SRR4302540.8106192/94‑1 (MQ=60)

                                                                      TATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGG                        <  SRR4302540.8880758/94‑1 (MQ=60)

                                                                      TATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGG                        >  SRR4302540.2310171/1‑94 (MQ=60)

                                                                      TATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGG                        >  SRR4302540.8999261/1‑94 (MQ=60)

                                                                      TATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGG                        <  SRR4302540.8937691/94‑1 (MQ=60)

                                                                       ATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGT                       >  SRR4302540.9937107/1‑94 (MQ=60)

                                                                       ATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGT                       >  SRR4302540.1197613/1‑94 (MQ=60)

                                                                       ATATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGT                       >  SRR4302540.6721301/1‑94 (MQ=60)

                                                                        TATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTT                      >  SRR4302540.2477390/1‑94 (MQ=60)

                                                                         ATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTG                     <  SRR4302540.9948305/94‑1 (MQ=60)

                                                                         ATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTG                     >  SRR4302540.8563316/1‑94 (MQ=60)

                                                                         ATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTG                     <  SRR4302540.3549673/94‑1 (MQ=60)

                                                                         ATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTG                     <  SRR4302540.9206808/94‑1 (MQ=60)

                                                                         ATCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTG                     >  SRR4302540.1410194/1‑94 (MQ=60)

                                                                          TCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGA                    <  SRR4302540.7263740/94‑1 (MQ=60)

                                                                          TCACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGA                    >  SRR4302540.5762037/1‑94 (MQ=60)

                                                                           CACTCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGAT                   <  SRR4302540.1918614/94‑1 (MQ=60)

                                                                              TCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATA                >  SRR4302540.1540365/1‑94 (MQ=60)

                                                                              TCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATA                >  SRR4302540.7907543/1‑94 (MQ=60)

                                                                              TCAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATA                <  SRR4302540.3751351/94‑1 (MQ=60)

                                                                               CAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAA               >  SRR4302540.10143192/1‑94 (MQ=60)

                                                                               CAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAA               >  SRR4302540.195277/1‑94 (MQ=60)

                                                                               CAGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAA               <  SRR4302540.6506830/94‑1 (MQ=60)

                                                                                AGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAT              >  SRR4302540.8110771/1‑94 (MQ=60)

                                                                                AGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAA              >  SRR4302540.9950827/1‑94 (MQ=60)

                                                                                AGGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAA              >  SRR4302540.9620698/1‑94 (MQ=60)

                                                                                 GGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAT             <  SRR4302540.6432849/94‑1 (MQ=60)

                                                                                 GGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAT             >  SRR4302540.5025996/1‑94 (MQ=60)

                                                                                 GGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAT             <  SRR4302540.464209/94‑1 (MQ=60)

                                                                                 GGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAT             <  SRR4302540.6432848/94‑1 (MQ=60)

                                                                                 GGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAT             <  SRR4302540.6586475/94‑1 (MQ=60)

                                                                                 GGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAT             >  SRR4302540.7624611/1‑94 (MQ=60)

                                                                                 GGATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCAGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAAT             <  SRR4302540.1538840/94‑1 (MQ=60)

                                                                                  GATCCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATT            <  SRR4302540.5087402/94‑1 (MQ=60)

                                                                                     CCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTAT         <  SRR4302540.3532950/94‑1 (MQ=60)

                                                                                     CCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTAT         <  SRR4302540.1354402/94‑1 (MQ=60)

                                                                                     CCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTAT         >  SRR4302540.4081446/1‑94 (MQ=60)

                                                                                     CCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTAT         <  SRR4302540.6611679/94‑1 (MQ=60)

                                                                                     CCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTAT         <  SRR4302540.6611678/94‑1 (MQ=60)

                                                                                     CCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTAT         <  SRR4302540.3837186/94‑1 (MQ=60)

                                                                                     CCGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTAT         <  SRR4302540.6243026/94‑1 (MQ=60)

                                                                                      CGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATC        >  SRR4302540.6957140/1‑94 (MQ=60)

                                                                                      CGATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATA        >  SRR4302540.3134405/1‑94 (MQ=60)

                                                                                       GATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAC       <  SRR4302540.9328338/94‑1 (MQ=60)

                                                                                       GATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAC       <  SRR4302540.10144036/94‑1 (MQ=60)

                                                                                       GATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAC       <  SRR4302540.2615644/94‑1 (MQ=60)

                                                                                       GATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATAC       <  SRR4302540.8600103/94‑1 (MQ=60)

                                                                                        ATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACC      <  SRR4302540.2890445/94‑1 (MQ=60)

                                                                                        ATTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACC      >  SRR4302540.9823039/1‑94 (MQ=60)

                                                                                         TTGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCC     <  SRR4302540.5460533/94‑1 (MQ=60)

                                                                                          TGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCC    <  SRR4302540.9756460/94‑1 (MQ=60)

                                                                                          TGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCC    >  SRR4302540.1914783/1‑94 (MQ=60)

                                                                                          TGGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCC    <  SRR4302540.2306983/94‑1 (MQ=60)

                                                                                           GGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCG   <  SRR4302540.5422460/94‑1 (MQ=60)

                                                                                           GGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCG   <  SRR4302540.9108486/94‑1 (MQ=60)

                                                                                           GGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCG   <  SRR4302540.7960024/94‑1 (MQ=60)

                                                                                           GGACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCG   >  SRR4302540.3794378/1‑94 (MQ=60)

                                                                                            GACTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGA  >  SRR4302540.4970337/1‑94 (MQ=60)

GCAGCAGTATGATGAGGAGTCCGGCCTGTATTACAACCGCCACCGCTATTATGACCCGCTGCAGGGGCGGTATATCACTCAGGATCCGATTGGGCTGAAGGGGGGATGGAATTTTTATCAGTATCCGTTGAATCCGGTCATAAATGTAGATCCGCAAGGTTTGGTTGATATAAATTTATACCCCGA  >  NC_000913/3765141‑3765326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`