Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,768,519 T→C D163G (GAC→GGC)  yibH ← putative membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,768,5190TC95.1% 1340.1 / 39.7 469D163G (GAC→GGC) yibHputative membrane protein
Reads supporting (aligned to +/- strand):  ref base T (7/16);  new base C (194/252);  total (201/268)
Fisher's exact test for biased strand distribution p-value = 2.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.19e-01

Only 100 of 480 total aligned reads displayed.

TCGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACC  >  NC_000913/3768429‑3768608
                                                                                          |                                                                                         
tCGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCa                                                                                         <  1:7481183/93‑1 (MQ=255)
  gAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCGCCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACg                                                                                       <  1:5283022/93‑1 (MQ=255)
  gAGCTGGCTCTGGAGCTGCGCCCGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACg                                                                                       <  2:2813803/93‑1 (MQ=255)
   aGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGt                                                                                      <  1:7096942/93‑1 (MQ=255)
    gCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGtt                                                                                     >  2:1835827/1‑93 (MQ=255)
      tGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTcc                                                                                   >  1:8509866/1‑93 (MQ=255)
        gCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCga                                                                                 <  1:6925559/93‑1 (MQ=255)
         ctctGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCgag                                                                                >  2:3740853/1‑93 (MQ=255)
          tctGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCgaga                                                                               <  1:2712866/93‑1 (MQ=255)
          tctGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCgaga                                                                               <  2:5375695/93‑1 (MQ=255)
           ctGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGaa                                                                              >  2:8411890/1‑93 (MQ=255)
           ctGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGaa                                                                              >  1:8855833/1‑93 (MQ=255)
           ctGGATCTGCGCCGGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGaa                                                                              <  1:6779937/93‑1 (MQ=255)
            tGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCgagacg                                                                             >  1:3601014/1‑91 (MQ=255)
            tGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAAc                                                                             >  2:9142698/1‑93 (MQ=255)
            tGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAAc                                                                             <  2:308230/93‑1 (MQ=255)
             ggATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACg                                                                            >  2:6509963/1‑93 (MQ=255)
              gATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACgg                                                                           <  1:317855/93‑1 (MQ=255)
               aTCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGa                                                                          <  1:9083626/93‑1 (MQ=255)
                tCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGAt                                                                         <  2:5497194/93‑1 (MQ=255)
                 cTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGAtt                                                                        <  2:8248010/93‑1 (MQ=255)
                 cTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGAtt                                                                        <  1:7373441/93‑1 (MQ=255)
                  tGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTc                                                                       >  2:1667181/1‑93 (MQ=255)
                    cgcCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCaa                                                                     >  2:7759906/1‑92 (MQ=255)
                    cgcCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAc                                                                     <  1:451240/93‑1 (MQ=255)
                    cgcCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAc                                                                     <  1:3725512/93‑1 (MQ=255)
                     gcCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAcc                                                                    <  2:9325932/93‑1 (MQ=255)
                     gcCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAcc                                                                    <  1:5976551/93‑1 (MQ=255)
                      ccTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAccg                                                                   <  1:195359/93‑1 (MQ=255)
                       cTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAccgc                                                                  >  1:1504698/1‑93 (MQ=255)
                        tGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAccgcc                                                                 <  2:462904/93‑1 (MQ=255)
                        tGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAccgcc                                                                 >  2:8070517/1‑93 (MQ=255)
                         gCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCAccgccg                                                                <  1:1152932/93‑1 (MQ=255)
                           tCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCgccgcc                                                              <  2:4242559/93‑1 (MQ=255)
                           tCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCgccgcc                                                              >  1:5330336/1‑93 (MQ=255)
                           tCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCgccgcc                                                              <  2:6194745/93‑1 (MQ=255)
                           cccGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCgccgcc                                                              <  1:3467048/92‑1 (MQ=255)
                              gCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTgg                                                           >  1:7793440/1‑93 (MQ=255)
                               ccACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCCGCCTGGc                                                          <  2:8661837/93‑1 (MQ=255)
                               ccACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGc                                                          <  2:4383598/93‑1 (MQ=255)
                               ccACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGc                                                          <  2:126743/93‑1 (MQ=255)
                               ccACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGc                                                          <  1:3956444/93‑1 (MQ=255)
                                cACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCt                                                         >  1:9188128/1‑93 (MQ=255)
                                 aCCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTg                                                        >  1:4719214/1‑93 (MQ=255)
                                   cGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGcc                                                      >  1:4894043/1‑93 (MQ=255)
                                    gAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCt                                                     <  1:6551502/93‑1 (MQ=255)
                                    gAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCt                                                     <  1:5510367/93‑1 (MQ=255)
                                      gCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCttt                                                   >  2:9810440/1‑93 (MQ=255)
                                      gCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCttt                                                   >  1:3323745/1‑93 (MQ=255)
                                      gCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCCGGCTGCCttt                                                   >  2:2230109/1‑93 (MQ=255)
                                       ccTTTCCCCAGCACAACCTGCGCGAGGCAGTTTTGCCGCGCATAGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTATc                                                  <  2:8950503/93‑1 (MQ=255)
                                       ccTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTc                                                  <  1:4222580/93‑1 (MQ=255)
                                       ccTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTc                                                  <  1:8401767/93‑1 (MQ=255)
                                       ccTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTc                                                  <  2:2481243/93‑1 (MQ=255)
                                       ccTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTc                                                  >  2:4808423/1‑93 (MQ=255)
                                         tttCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCaa                                                <  2:7511012/93‑1 (MQ=255)
                                          ttCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAg                                               <  1:221438/93‑1 (MQ=255)
                                          ttCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAg                                               <  2:57028/93‑1 (MQ=255)
                                           tCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGt                                              <  2:7215679/93‑1 (MQ=255)
                                           tCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGt                                              >  2:2040536/1‑93 (MQ=255)
                                              ccAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTGACCGCCGCCTGGCTGCCTTTCAAGTAAc                                           <  1:6407988/93‑1 (MQ=255)
                                               cAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACg                                          <  2:9583853/93‑1 (MQ=255)
                                               cAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACg                                          >  2:7130699/1‑93 (MQ=255)
                                               cAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACg                                          >  2:8881361/1‑93 (MQ=255)
                                               cAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACg                                          <  2:1135943/93‑1 (MQ=255)
                                                aGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGt                                         >  2:3962845/1‑93 (MQ=255)
                                                 gcgcATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGtt                                        <  1:8616536/93‑1 (MQ=255)
                                                    cATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGAt                                     >  1:7971995/1‑93 (MQ=255)
                                                     aTCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATa                                    <  2:361553/93‑1 (MQ=255)
                                                      tCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATaa                                   <  2:10029971/93‑1 (MQ=255)
                                                        cTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCTAGTTACGTTGATAAtt                                 >  2:4567371/1‑93 (MQ=255)
                                                         tGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAAttt                                >  1:2453973/1‑93 (MQ=255)
                                                         tGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAAttt                                <  2:5150530/93‑1 (MQ=255)
                                                         tGCGCGAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAAttt                                >  2:2705911/1‑93 (MQ=255)
                                                           cgcgAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAAttttt                              >  1:606778/1‑93 (MQ=255)
                                                            gcgAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTa                             <  2:8151058/93‑1 (MQ=255)
                                                             cgAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTaa                            >  2:1421170/1‑93 (MQ=255)
                                                             cgAGCAAATTTTGCCGCGCATCGGCGATCCCACGTTCCGAGAACGGATGCACCGCCCCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTaa                            <  1:7235832/93‑1 (MQ=255)
                                                              gAGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTaaa                           >  1:1769617/1‑93 (MQ=255)
                                                              gAGGAAATTGTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTaaa                           <  1:2564423/93‑1 (MQ=255)
                                                               aGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAAc                          <  2:5769097/93‑1 (MQ=255)
                                                               aGGAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAAc                          <  1:2132392/93‑1 (MQ=255)
                                                               aGGAAATTTTGCAGGGCATTGACGATGACACGGTCCGGGAACGGATTCACCGCCGCCGGGGTGGCTTTCCAGTAAAGTTGATAAATTTTaaaa                          >  2:5998677/1‑92 (MQ=255)
                                                                ggAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACa                         <  1:831068/93‑1 (MQ=255)
                                                                ggAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACa                         <  2:3304506/93‑1 (MQ=255)
                                                                ggAAATTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCATTTCAAGTAACGTTGATAATTTTTAAACa                         <  1:8934577/93‑1 (MQ=255)
                                                                   aaTTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTTACGTTGATAATTTTTAAACCGAc                      >  2:6089595/1‑93 (MQ=255)
                                                                     ttttGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACgg                    <  1:8081945/93‑1 (MQ=255)
                                                                       ttGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTc                  <  1:4829442/93‑1 (MQ=255)
                                                                          ccGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTcgcg               >  2:2957146/1‑93 (MQ=255)
                                                                           cgcgCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTCACGTTGATAATTTTTAAAAAGACGGTCgcgc              >  1:971448/1‑93 (MQ=255)
                                                                           cgcgCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCgcgc              >  2:7686351/1‑93 (MQ=255)
                                                                           cgcgCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCgcgc              >  2:6999661/1‑93 (MQ=255)
                                                                            gcgcATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCt             >  2:6308885/1‑93 (MQ=255)
                                                                                aTCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGc         >  1:4995950/1‑93 (MQ=255)
                                                                                aTCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGc         >  1:6219139/1‑93 (MQ=255)
                                                                                 tcgtcgATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCt        >  1:5684986/1‑93 (MQ=255)
                                                                                  cgtcgATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTg       >  2:2615336/1‑93 (MQ=255)
                                                                                    tcgATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGaa     >  1:1013362/1‑93 (MQ=255)
                                                                                      gATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAAc   <  1:9336848/93‑1 (MQ=255)
                                                                                          |                                                                                         
TCGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAATTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACC  >  NC_000913/3768429‑3768608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 259 total aligned reads displayed.
CTGTCGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACCTGGG  >  NC_000913/3768426‑3768612
                                                                                              |                                                                                             
CTGTCGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGC                                                                                               >  SRR4302540.4488196/1‑94 (MQ=60)
  GTCGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCA                                                                                             <  SRR4302540.6189191/94‑1 (MQ=60)
  GTCGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCA                                                                                             >  SRR4302540.1565127/1‑94 (MQ=60)
  GTCGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCA                                                                                             <  SRR4302540.6602611/94‑1 (MQ=60)
   TCGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCAC                                                                                            <  SRR4302540.7564686/94‑1 (MQ=60)
    CGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACG                                                                                           >  SRR4302540.8408418/1‑94 (MQ=60)
    CGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACG                                                                                           <  SRR4302540.782190/94‑1 (MQ=60)
     GAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCGCCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGT                                                                                          <  SRR4302540.5340745/94‑1 (MQ=60)
      AGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTT                                                                                         <  SRR4302540.7175917/94‑1 (MQ=60)
       GCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTC                                                                                        <  SRR4302540.2357245/94‑1 (MQ=60)
       GCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTC                                                                                        <  SRR4302540.3731117/94‑1 (MQ=60)
       GCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCACGCATCGTCGATGCCACGTTC                                                                                        >  SRR4302540.3303698/1‑94 (MQ=60)
        CTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCC                                                                                       >  SRR4302540.8608763/1‑94 (MQ=60)
        CTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCC                                                                                       <  SRR4302540.4473885/94‑1 (MQ=60)
        CTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCC                                                                                       >  SRR4302540.4853926/1‑94 (MQ=60)
        CTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCC                                                                                       <  SRR4302540.4539232/94‑1 (MQ=60)
         TGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCG                                                                                      <  SRR4302540.882197/94‑1 (MQ=60)
         TGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCG                                                                                      >  SRR4302540.2496716/1‑94 (MQ=60)
           GCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAG                                                                                    <  SRR4302540.7002634/94‑1 (MQ=60)
           GCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAG                                                                                    >  SRR4302540.9360815/1‑94 (MQ=60)
             TCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAA                                                                                  >  SRR4302540.1907664/1‑94 (MQ=60)
             TCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAA                                                                                  <  SRR4302540.2742118/94‑1 (MQ=60)
             TCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAA                                                                                  >  SRR4302540.782427/1‑94 (MQ=60)
              CTGGATCTGGGCCTGCTCCGCCACCGAGCCTTGCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAAC                                                                                 <  SRR4302540.4840472/94‑1 (MQ=60)
              CTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCAGGTTCCGAGAcg                                                                                 >  SRR4302540.2637136/1‑92 (MQ=60)
              CTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAAC                                                                                 >  SRR4302540.2811189/1‑94 (MQ=60)
              CTGGATCTGCGCCGGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAAC                                                                                 <  SRR4302540.6854896/94‑1 (MQ=60)
                TGATCGGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGG                                                                               <  SRR4302540.3215929/94‑1 (MQ=60)
                 GATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGA                                                                              >  SRR4302540.6448617/1‑94 (MQ=60)
                 GATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGA                                                                              <  SRR4302540.321027/94‑1 (MQ=60)
                  ATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGAT                                                                             >  SRR4302540.2545618/1‑94 (MQ=60)
                    CTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTC                                                                           <  SRR4302540.6256049/94‑1 (MQ=60)
                    CTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTC                                                                           <  SRR4302540.7455624/94‑1 (MQ=60)
                    CTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTC                                                                           <  SRR4302540.6642196/94‑1 (MQ=60)
                     TGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCA                                                                          >  SRR4302540.8962849/1‑94 (MQ=60)
                     TGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCA                                                                          <  SRR4302540.378407/94‑1 (MQ=60)
                      GCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGCAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAC                                                                         >  SRR4302540.5611589/1‑94 (MQ=60)
                      GCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAC                                                                         >  SRR4302540.8472048/1‑94 (MQ=60)
                       CGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACC                                                                        <  SRR4302540.7316412/94‑1 (MQ=60)
                       CGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACC                                                                        <  SRR4302540.3714888/94‑1 (MQ=60)
                       CGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACC                                                                        <  SRR4302540.9215749/94‑1 (MQ=60)
                       CGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACC                                                                        <  SRR4302540.456047/94‑1 (MQ=60)
                       CGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACC                                                                        <  SRR4302540.1482425/94‑1 (MQ=60)
                       CGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACC                                                                        <  SRR4302540.218239/94‑1 (MQ=60)
                       CGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACC                                                                        <  SRR4302540.3802763/94‑1 (MQ=60)
                        GCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCC                                                                       >  SRR4302540.7089058/1‑94 (MQ=60)
                        GCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCG                                                                       <  SRR4302540.6042711/94‑1 (MQ=60)
                        GCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCG                                                                       <  SRR4302540.6591392/94‑1 (MQ=60)
                        GCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCG                                                                       <  SRR4302540.1101627/94‑1 (MQ=60)
                         CCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGC                                                                      >  SRR4302540.1521296/1‑94 (MQ=60)
                         CCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGC                                                                      <  SRR4302540.7516518/94‑1 (MQ=60)
                         CCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGC                                                                      <  SRR4302540.197298/94‑1 (MQ=60)
                          ctgtgCCGCCGCCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCAGCGGCGATGCCACGTTCCGAGAACGGATTCACCGCC                                                                     <  SRR4302540.4253506/89‑1 (MQ=60)
                          CTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCC                                                                     <  SRR4302540.2512427/94‑1 (MQ=60)
                          CTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCC                                                                     <  SRR4302540.4253507/94‑1 (MQ=60)
                          CTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCC                                                                     <  SRR4302540.1381783/94‑1 (MQ=60)
                          CTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCC                                                                     <  SRR4302540.3504617/94‑1 (MQ=60)
                          CTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCC                                                                     <  SRR4302540.10015156/94‑1 (MQ=60)
                           TGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCC                                                                    >  SRR4302540.1985247/1‑94 (MQ=60)
                            GCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCCGC                                                                   <  SRR4302540.1164936/94‑1 (MQ=60)
                            GCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCCGC                                                                   <  SRR4302540.1164935/94‑1 (MQ=60)
                            GCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGC                                                                   >  SRR4302540.7441945/1‑94 (MQ=60)
                            GCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGC                                                                   >  SRR4302540.1997734/1‑94 (MQ=60)
                            GCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGC                                                                   >  SRR4302540.811703/1‑94 (MQ=60)
                            GCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGC                                                                   >  SRR4302540.811704/1‑94 (MQ=60)
                             CTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCC                                                                  >  SRR4302540.5388517/1‑94 (MQ=60)
                             CTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCC                                                                  >  SRR4302540.5388730/1‑94 (MQ=60)
                             CTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCC                                                                  >  SRR4302540.4866493/1‑94 (MQ=60)
                              ccccCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCT                                                                 <  SRR4302540.7963503/90‑1 (MQ=60)
                              TCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCT                                                                 >  SRR4302540.5343213/1‑94 (MQ=60)
                              CCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCT                                                                 <  SRR4302540.3504789/94‑1 (MQ=60)
                              CCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCT                                                                 <  SRR4302540.8866122/94‑1 (MQ=60)
                              CCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCT                                                                 <  SRR4302540.4933923/94‑1 (MQ=60)
                               CCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTG                                                                <  SRR4302540.2092020/94‑1 (MQ=60)
                               CCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTG                                                                >  SRR4302540.7491500/1‑94 (MQ=60)
                                CGCCCCCGAGCCTTTCACCAGCGCCTCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGG                                                               <  SRR4302540.8646443/94‑1 (MQ=60)
                                CGCCACCGAGCCTTTCACCAGCTCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGG                                                               <  SRR4302540.4259391/94‑1 (MQ=60)
                                CGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGACA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGG                                                               >  SRR4302540.8333849/1‑94 (MQ=60)
                                CGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGG                                                               >  SRR4302540.3639777/1‑94 (MQ=60)
                                CGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGG                                                               <  SRR4302540.7894287/94‑1 (MQ=60)
                                 GCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGC                                                              >  SRR4302540.375454/1‑94 (MQ=60)
                                  CCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCCGCCTGGCT                                                             <  SRR4302540.1825564/94‑1 (MQ=60)
                                  CCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCT                                                             <  SRR4302540.3999133/94‑1 (MQ=60)
                                  CCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCT                                                             <  SRR4302540.8227939/94‑1 (MQ=60)
                                  CCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCT                                                             >  SRR4302540.2402241/1‑94 (MQ=60)
                                  CCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCT                                                             >  SRR4302540.9298314/1‑94 (MQ=60)
                                   CACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTG                                                            >  SRR4302540.4769621/1‑94 (MQ=60)
                                   CACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTG                                                            >  SRR4302540.3083887/1‑94 (MQ=60)
                                   CACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTG                                                            >  SRR4302540.9177699/1‑94 (MQ=60)
                                     CCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCC                                                          >  SRR4302540.4946674/1‑94 (MQ=60)
                                       GAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTT                                                        <  SRR4302540.5571057/94‑1 (MQ=60)
                                       GAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTT                                                        <  SRR4302540.6624167/94‑1 (MQ=60)
                                        AGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGCTTCACCGCCGCCTGGCTGCCTTT                                                       >  SRR4302540.3360208/1‑94 (MQ=60)
                                        AGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTT                                                       >  SRR4302540.3360207/1‑94 (MQ=60)
                                         GCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTC                                                      >  SRR4302540.6082211/1‑94 (MQ=60)
                                         GCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTC                                                      <  SRR4302540.9200441/94‑1 (MQ=60)
                                         GCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTC                                                      <  SRR4302540.1528686/94‑1 (MQ=60)
                                          CCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCA                                                     >  SRR4302540.8592321/1‑94 (MQ=60)
                                          CCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCA                                                     <  SRR4302540.4268545/94‑1 (MQ=60)
                                          CCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCA                                                     >  SRR4302540.8185285/1‑94 (MQ=60)
                                          CCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCA                                                     <  SRR4302540.8499277/94‑1 (MQ=60)
                                          CCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCA                                                     <  SRR4302540.4918377/94‑1 (MQ=60)
                                          CCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCA                                                     <  SRR4302540.8704068/94‑1 (MQ=60)
                                           CTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAA                                                    >  SRR4302540.2917018/1‑94 (MQ=60)
                                           CTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAA                                                    >  SRR4302540.9344731/1‑94 (MQ=60)
                                           CTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAA                                                    <  SRR4302540.9140131/94‑1 (MQ=60)
                                           CTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCCTTCAA                                                    >  SRR4302540.534770/1‑94 (MQ=60)
                                            TTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAG                                                   <  SRR4302540.4606160/94‑1 (MQ=60)
                                            TTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAG                                                   <  SRR4302540.7298755/94‑1 (MQ=60)
                                             TTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGT                                                  <  SRR4302540.223586/94‑1 (MQ=60)
                                              TCGCCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTA                                                 <  SRR4302540.1007691/94‑1 (MQ=60)
                                              TCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTA                                                 >  SRR4302540.6254209/1‑94 (MQ=60)
                                                 CCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTGACCGCCGCCTGGCTGCCTTTCAAGTAACG                                              <  SRR4302540.6479308/94‑1 (MQ=60)
                                                 CCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACG                                              <  SRR4302540.1814159/94‑1 (MQ=60)
                                                   AGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAcggtg                                            >  SRR4302540.1426210/1‑89 (MQ=60)
                                                   AGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTT                                            <  SRR4302540.7005729/94‑1 (MQ=60)
                                                   AGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTT                                            <  SRR4302540.6124309/94‑1 (MQ=60)
                                                    GCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTG                                           <  SRR4302540.7632309/94‑1 (MQ=60)
                                                    GCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTG                                           <  SRR4302540.2230811/94‑1 (MQ=60)
                                                    GCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTG                                           <  SRR4302540.8716642/94‑1 (MQ=60)
                                                      GCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGAT                                         >  SRR4302540.8064884/1‑94 (MQ=60)
                                                        ATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAA                                       >  SRR4302540.6163052/1‑94 (MQ=60)
                                                          CCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATT                                     >  SRR4302540.542657/1‑94 (MQ=60)
                                                           CTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTT                                    <  SRR4302540.9124746/94‑1 (MQ=60)
                                                           CTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCAGCCTGGCTGCCTTTCAAGTAACGTTGATAATTT                                    >  SRR4302540.9783729/1‑94 (MQ=60)
                                                            TGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTTATAATTTT                                   <  SRR4302540.9255936/94‑1 (MQ=60)
                                                            TGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTT                                   >  SRR4302540.4053125/1‑94 (MQ=60)
                                                            TGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTT                                   <  SRR4302540.6921017/94‑1 (MQ=60)
                                                            TGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTT                                   <  SRR4302540.5978734/94‑1 (MQ=60)
                                                            TGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTT                                   >  SRR4302540.6082435/1‑94 (MQ=60)
                                                            TGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTT                                   <  SRR4302540.5686688/94‑1 (MQ=60)
                                                            CGCGCGAGGAAACTTTTGCC‑CCCATCGTCGATGTCACCTTCCCAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTT                                   <  SRR4302540.2765041/94‑1 (MQ=60)
                                                             GCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTT                                  <  SRR4302540.520270/94‑1 (MQ=60)
                                                             GCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTT                                  >  SRR4302540.613264/1‑94 (MQ=60)
                                                             GCGCGAGGAAA‑GTTTGCCGCGCATCGGCGATTTCCCGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTT                                  <  SRR4302540.3589901/94‑1 (MQ=60)
                                                              CGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTA                                 >  SRR4302540.1724329/1‑94 (MQ=60)
                                                              CGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTA                                 <  SRR4302540.5617049/94‑1 (MQ=60)
                                                               GCGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAA                                <  SRR4302540.7335185/94‑1 (MQ=60)
                                                                CGAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAA                               >  SRR4302540.1788816/1‑94 (MQ=60)
                                                                CGAGCAAA‑TTTTGCCGCGCATCGGCGATCCCACGTTCCGAGAACGGATGCACCGCCCCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAA                               <  SRR4302540.7316546/94‑1 (MQ=60)
                                                                 GAGGAAA‑TTTTGCCGCGCATCGTCGATGCGACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAAC                              <  SRR4302540.9453018/94‑1 (MQ=60)
                                                                 GAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAAC                              <  SRR4302540.1146173/94‑1 (MQ=60)
                                                                 GAGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAAC                              >  SRR4302540.5316216/1‑94 (MQ=60)
                                                                 GAGGAAA‑TTGTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAAC                              <  SRR4302540.2592071/94‑1 (MQ=60)
                                                                  AGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACA                             <  SRR4302540.9636515/94‑1 (MQ=60)
                                                                  AGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACA                             <  SRR4302540.3524781/94‑1 (MQ=60)
                                                                  AGGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACA                             <  SRR4302540.2155282/94‑1 (MQ=60)
                                                                   GGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAG                            <  SRR4302540.839896/94‑1 (MQ=60)
                                                                   GGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAG                            <  SRR4302540.9388881/94‑1 (MQ=60)
                                                                   GGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAG                            <  SRR4302540.8929446/94‑1 (MQ=60)
                                                                   GGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAG                            <  SRR4302540.851707/94‑1 (MQ=60)
                                                                   GGAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAG                            <  SRR4302540.4700635/94‑1 (MQ=60)
                                                                    GAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGA                           <  SRR4302540.8109738/94‑1 (MQ=60)
                                                                    GAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGA                           <  SRR4302540.8986460/94‑1 (MQ=60)
                                                                    GAAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGA                           >  SRR4302540.7395048/1‑94 (MQ=60)
                                                                     AAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGAC                          <  SRR4302540.2741731/94‑1 (MQ=60)
                                                                     AAA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGAC                          <  SRR4302540.2150500/94‑1 (MQ=60)
                                                                      AA‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACG                         >  SRR4302540.6383837/1‑94 (MQ=60)
                                                                       A‑TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGG                        <  SRR4302540.673773/94‑1 (MQ=60)
                                                                         TTTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGT                       <  SRR4302540.8175748/94‑1 (MQ=60)
                                                                          TTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTC                      <  SRR4302540.494951/94‑1 (MQ=60)
                                                                          TTTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTC                      <  SRR4302540.8996043/94‑1 (MQ=60)
                                                                           TTGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCG                     <  SRR4302540.4881165/94‑1 (MQ=60)
                                                                            TGCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGC                    >  SRR4302540.2379101/1‑94 (MQ=60)
                                                                             TCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCG                   <  SRR4302540.6610328/94‑1 (MQ=60)
                                                                             GCCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCG                   >  SRR4302540.5442937/1‑94 (MQ=60)
                                                                              CCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTCACGTTGATAATTTTTAAAAAGACGGTCGCGC                  >  SRR4302540.981444/1‑94 (MQ=60)
                                                                              CCGCGCATCGTCGATGCCACGTTCCGAGAACGGATTCAACGCCGCCTGGCTGCCTTTCAAGTAACGTTGCTAATTTTTAAACAacacgtccgcc                  >  SRR4302540.2850482/1‑83 (MQ=60)
                                                                                 CGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCC               >  SRR4302540.373341/1‑94 (MQ=60)
                                                                                 CGCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCC               >  SRR4302540.338532/1‑94 (MQ=60)
                                                                                  GCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCG              <  SRR4302540.3901293/94‑1 (MQ=60)
                                                                                  GCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCG              <  SRR4302540.2676114/94‑1 (MQ=60)
                                                                                  GCATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCG              <  SRR4302540.4652850/94‑1 (MQ=60)
                                                                                   CATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGC             <  SRR4302540.5106829/94‑1 (MQ=60)
                                                                                   CATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGC             >  SRR4302540.5050034/1‑94 (MQ=60)
                                                                                   CATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGC             >  SRR4302540.6414441/1‑94 (MQ=60)
                                                                                   CATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGC             >  SRR4302540.5050033/1‑94 (MQ=60)
                                                                                   CATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGC             >  SRR4302540.6288327/1‑94 (MQ=60)
                                                                                    ATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCT            >  SRR4302540.5747574/1‑94 (MQ=60)
                                                                                    ATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCT            >  SRR4302540.8711524/1‑94 (MQ=60)
                                                                                    ATCGTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCT            >  SRR4302540.6906144/1‑94 (MQ=60)
                                                                                       GTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAA         >  SRR4302540.5754191/1‑94 (MQ=60)
                                                                                       GTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAA         >  SRR4302540.1023634/1‑94 (MQ=60)
                                                                                       GTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAA         <  SRR4302540.8331958/94‑1 (MQ=60)
                                                                                       GTCGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAA         >  SRR4302540.7927472/1‑94 (MQ=60)
                                                                                         CGATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAAC       >  SRR4302540.7303387/1‑94 (MQ=60)
                                                                                          GATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACC      <  SRR4302540.9448140/94‑1 (MQ=60)
                                                                                          GATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACC      >  SRR4302540.9881151/1‑94 (MQ=60)
                                                                                          GATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACC      >  SRR4302540.858930/1‑94 (MQ=60)
                                                                                          GATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACC      <  SRR4302540.7036868/94‑1 (MQ=60)
                                                                                          GATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACC      <  SRR4302540.697532/94‑1 (MQ=60)
                                                                                          GATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACC      <  SRR4302540.4888882/94‑1 (MQ=60)
                                                                                           ATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGACACCT     >  SRR4302540.266283/1‑94 (MQ=60)
                                                                                           ATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACCT     <  SRR4302540.9017699/94‑1 (MQ=60)
                                                                                           ATGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACCT     >  SRR4302540.2289719/1‑94 (MQ=60)
                                                                                            TGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGACACCTG    >  SRR4302540.4169866/1‑94 (MQ=60)
                                                                                            TGCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACCTG    >  SRR4302540.2791998/1‑94 (MQ=60)
                                                                                             GCCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACCTGG   <  SRR4302540.7820650/94‑1 (MQ=60)
                                                                                              CCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTTGCGCTCCGCTGAAACCTGGG  >  SRR4302540.5429418/1‑94 (MQ=60)
                                                                                              CCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACCTGGG  >  SRR4302540.3462932/1‑94 (MQ=60)
                                                                                              |                                                                                             
CTGTCGAGCTGGCTCTGGATCTGCGCCTGCTCCGCCACCGAGCCTTTCACCAGCGCATCCTGCGCGAGGAAA‑TTTTGCCGCGCATCGTCGATGTCACGTTCCGAGAACGGATTCACCGCCGCCTGGCTGCCTTTCAAGTAACGTTGATAATTTTTAAACAGACGGTCGCGCTCCGCTGAAACCTGGG  >  NC_000913/3768426‑3768612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑