Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,785,382	G→A	T306T (ACG→ACA)	b3613 →	putative membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,785,382	0	G	A	99.5%	1317.4 / ‑4.6	365	T306T (ACG→ACA)	b3613	putative membrane protein
Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (171/191); total (172/193)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01

Only 100 of 379 total aligned reads displayed.

ACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGAT  >  NC_000913/3785292‑3785471

accgaccgAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACt                                                                                         <  1:5799023/93‑1 (MQ=255)

  cgaccgaAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGc                                                                                       >  1:1153398/1‑93 (MQ=255)

  cgaccgaAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGc                                                                                       >  2:6468857/1‑93 (MQ=255)

  cgaccgaAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGc                                                                                       <  1:3427345/93‑1 (MQ=255)

    accgaAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCAt                                                                                     >  1:6980409/1‑93 (MQ=255)

     ccgaAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATc                                                                                    <  1:2886536/93‑1 (MQ=255)

        aaaGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCt                                                                                 >  2:6658110/1‑93 (MQ=255)

         aaGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCtt                                                                                >  2:7245029/1‑92 (MQ=255)

         aaGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTa                                                                                >  2:9018526/1‑93 (MQ=255)

         aaGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTa                                                                                <  1:3625692/93‑1 (MQ=255)

         aaGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTa                                                                                >  2:5579562/1‑93 (MQ=255)

         aaGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTa                                                                                >  1:9376790/1‑93 (MQ=255)

          aGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTAt                                                                               <  2:3958617/93‑1 (MQ=255)

           gCGAAAAATCGCTGATGTCCCGTACCGGTGGGCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGCCCCTGTCTCGCTCTg                                                                              >  1:6372018/1‑93 (MQ=255)

            cGAAAAATCGCTGATGTCCCGTCCCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATgg                                                                             <  2:6354701/93‑1 (MQ=255)

            cGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATgg                                                                             >  1:6748570/1‑93 (MQ=255)

            cGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATgg                                                                             <  1:10029962/93‑1 (MQ=255)

               aaaaTCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGa                                                                          >  1:3987017/1‑93 (MQ=255)

                aaaTCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGaa                                                                         >  2:9549576/1‑93 (MQ=255)

                 actCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGAGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAAc                                                                        <  2:8201467/91‑1 (MQ=255)

                 aaTCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAAc                                                                        <  1:4690175/93‑1 (MQ=255)

                 aaTCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAAc                                                                        >  2:927205/1‑93 (MQ=255)

                  aTCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACa                                                                       <  2:3718827/93‑1 (MQ=255)

                  aTCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGCCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACa                                                                       <  1:7255134/93‑1 (MQ=255)

                   tCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACac                                                                      >  1:2573470/1‑92 (MQ=255)

                      cTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTa                                                                   >  1:5030118/1‑93 (MQ=255)

                      cTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGAGGGCCGACACTGCATCGCTATGGCGAACAGCTa                                                                   >  1:9731857/1‑93 (MQ=255)

                       tGATGTCCCGTGCCGGTGGTGTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTAc                                                                  <  1:182801/93‑1 (MQ=255)

                       tGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTAc                                                                  <  2:5487983/93‑1 (MQ=255)

                       tGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTAc                                                                  >  2:4827330/1‑93 (MQ=255)

                       tGATGTCCCGTACCGGTGGGCTGGGCGCGCCGCGTGATCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAACTAc                                                                  >  2:7326016/1‑93 (MQ=255)

                         aTGTCCCGTCCCGGGGTCCTGGGCGCGCCGCGTGTTCGGGCATTCTGGCGGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAg                                                                <  2:2499968/93‑1 (MQ=255)

                         aTGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGGCGCAACTGCCTCGATGTGGGGAACAGACACAg                                                                >  1:7147564/1‑93 (MQ=255)

                          tGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAgg                                                               >  1:8613404/1‑93 (MQ=255)

                          tGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAgg                                                               <  1:1936855/93‑1 (MQ=255)

                          tGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAgg                                                               >  2:2754325/1‑93 (MQ=255)

                          tGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAgg                                                               <  1:4084160/93‑1 (MQ=255)

                              ccGTACCGGTGGTCTGGGCGGGCGGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGa                                                           <  1:2337159/93‑1 (MQ=255)

                               cGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGaa                                                          >  2:9479183/1‑93 (MQ=255)

                                gTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAAt                                                         >  1:611158/1‑93 (MQ=255)

                                  gcgggtggtCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTa                                                       <  1:8147587/90‑1 (MQ=255)

                                   ccGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTAc                                                      <  1:2164743/93‑1 (MQ=255)

                                   ccGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGCGAATTAc                                                      >  1:8471261/1‑93 (MQ=255)

                                   ccGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCGGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTAc                                                      <  2:411009/93‑1 (MQ=255)

                                    cGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACg                                                     >  2:5887045/1‑93 (MQ=255)

                                     ggtggtCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGc                                                    >  1:7535070/1‑93 (MQ=255)

                                     ggtggtCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGc                                                    >  2:909461/1‑93 (MQ=255)

                                     ggtggtCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGc                                                    >  2:2782/1‑93 (MQ=255)

                                     ggtggtCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGCGACTTACGc                                                    >  1:4106389/1‑93 (MQ=255)

                                     gggggtCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGc                                                    <  1:8869509/90‑1 (MQ=255)

                                       tggtCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTg                                                  >  1:9966117/1‑93 (MQ=255)

                                       gggtCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTg                                                  <  2:7423122/92‑1 (MQ=255)

                                          tCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGaa                                               <  2:6118435/93‑1 (MQ=255)

                                           cTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGaaa                                              <  2:5104088/93‑1 (MQ=255)

                                           cTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGaaa                                              <  1:1482399/93‑1 (MQ=255)

                                            tGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAg                                             <  2:9407262/93‑1 (MQ=255)

                                             gggCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAgg                                            <  2:4205517/93‑1 (MQ=255)

                                               gcgcgcCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTa                                          >  2:1051047/1‑93 (MQ=255)

                                               gcgcgcCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTa                                          >  1:4902350/1‑93 (MQ=255)

                                                cgcgcCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTAt                                         <  2:3627603/93‑1 (MQ=255)

                                                  cgccgcGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATgg                                       >  2:2950317/1‑93 (MQ=255)

                                                   gccgcGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGt                                      >  1:5268494/1‑93 (MQ=255)

                                                     cgcgTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGGGAATTACGCTGGAAAGGTATGGTTa                                    >  2:2147368/1‑93 (MQ=255)

                                                      gcgTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTAt                                   <  1:4377527/93‑1 (MQ=255)

                                                      gcgTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTAt                                   <  1:2753939/93‑1 (MQ=255)

                                                      gcgTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTAt                                   >  1:830759/1‑93 (MQ=255)

                                                        gTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCg                                 <  1:1728422/93‑1 (MQ=255)

                                                         tagTCAGGCATTGTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCgg                                <  2:8689000/91‑1 (MQ=255)

                                                         tGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCgg                                >  2:3558771/1‑93 (MQ=255)

                                                         tGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCgg                                >  2:619310/1‑93 (MQ=255)

                                                          ggTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGt                               >  1:3892180/1‑93 (MQ=255)

                                                          ggTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGt                               >  1:1206557/1‑93 (MQ=255)

                                                           gTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTg                              <  2:3288151/93‑1 (MQ=255)

                                                              aGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCtt                           >  2:7078032/1‑93 (MQ=255)

                                                               ggCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTc                          <  2:2224208/93‑1 (MQ=255)

                                                               ggCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTc                          >  2:5197109/1‑93 (MQ=255)

                                                                   ttCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGaa                      <  1:785413/93‑1 (MQ=255)

                                                                   ttCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGaa                      <  2:7781350/93‑1 (MQ=255)

                                                                    tCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAg                     <  1:871690/93‑1 (MQ=255)

                                                                    tCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAg                     >  1:631358/1‑93 (MQ=255)

                                                                    tCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAg                     <  1:8943114/93‑1 (MQ=255)

                                                                      tGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGt                   >  2:1871448/1‑93 (MQ=255)

                                                                       ggCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTa                  <  2:8374654/93‑1 (MQ=255)

                                                                           ggTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGa              >  1:7755683/1‑93 (MQ=255)

                                                                           ggTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGAATGGTCATCGGTGCTTCTGAAGGTACTGa              >  2:6932168/1‑93 (MQ=255)

                                                                             ttCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAg            <  2:5331901/93‑1 (MQ=255)

                                                                               cgcgGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGtt          <  2:7570824/93‑1 (MQ=255)

                                                                                gcgGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTa         <  2:7980298/93‑1 (MQ=255)

                                                                                gcgGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTa         <  1:5351069/93‑1 (MQ=255)

                                                                                gcgGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTa         <  1:3836153/93‑1 (MQ=255)

                                                                                 cgGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTaa        <  1:1864980/93‑1 (MQ=255)

                                                                                 cgGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTaa        >  2:4754945/1‑93 (MQ=255)

                                                                                 cgGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTaa        >  1:5550175/1‑93 (MQ=255)

                                                                                  gggCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTaaa       <  2:4348190/93‑1 (MQ=255)

                                                                                   ggCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAg      <  2:4535965/93‑1 (MQ=255)

                                                                                   ggCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAg      >  2:879491/1‑93 (MQ=255)

                                                                                    gCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGc     <  1:7725366/93‑1 (MQ=255)

                                                                                     ccGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCg    <  1:2801211/93‑1 (MQ=255)

                                                                                      cGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGa   >  1:3103495/1‑93 (MQ=255)

                                                                                       gACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGAt  >  2:2631682/1‑93 (MQ=255)

ACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGAT  >  NC_000913/3785292‑3785471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 217 total aligned reads displayed.

CAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATTGCC  >  NC_000913/3785289‑3785475

CAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGAGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACC                                                                                               >  SRR4302540.4348628/1‑94 (MQ=60)

 AAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACAC                                                                                              <  SRR4302540.1376918/94‑1 (MQ=60)

 AAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACAC                                                                                              >  SRR4302540.6149050/1‑94 (MQ=60)

 AAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACAC                                                                                              >  SRR4302540.6071371/1‑94 (MQ=60)

 AAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACAC                                                                                              >  SRR4302540.6951894/1‑94 (MQ=60)

 AAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACAC                                                                                              <  SRR4302540.5823087/94‑1 (MQ=60)

 AAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACAC                                                                                              >  SRR4302540.50834/1‑94 (MQ=60)

 AAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACAC                                                                                              >  SRR4302540.9880047/1‑94 (MQ=60)

   ACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTG                                                                                            <  SRR4302540.5863102/94‑1 (MQ=60)

    CCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGC                                                                                           >  SRR4302540.1165407/1‑94 (MQ=60)

     CGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCT                                                                                          >  SRR4302540.2845551/1‑94 (MQ=60)

     CGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCA                                                                                          >  SRR4302540.8717456/1‑94 (MQ=60)

     CGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCA                                                                                          >  SRR4302540.5207524/1‑94 (MQ=60)

     CGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCA                                                                                          <  SRR4302540.3464592/94‑1 (MQ=60)

      GACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCAT                                                                                         >  SRR4302540.7057950/1‑94 (MQ=60)

       ACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATC                                                                                        <  SRR4302540.9345933/94‑1 (MQ=60)

        CCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCG                                                                                       >  SRR4302540.4974303/1‑94 (MQ=60)

        CCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCG                                                                                       >  SRR4302540.8806590/1‑94 (MQ=60)

        CCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCG                                                                                       >  SRR4302540.7056162/1‑94 (MQ=60)

        CCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCG                                                                                       <  SRR4302540.2917965/94‑1 (MQ=60)

         CGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCCTCGC                                                                                      >  SRR4302540.1882767/1‑94 (MQ=60)

         CGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGC                                                                                      >  SRR4302540.8816796/1‑94 (MQ=60)

         CGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGC                                                                                      >  SRR4302540.76721/1‑94 (MQ=60)

         CGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGC                                                                                      <  SRR4302540.3745275/94‑1 (MQ=60)

          GAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCT                                                                                     >  SRR4302540.2390320/1‑94 (MQ=60)

           AAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTA                                                                                    >  SRR4302540.1902910/1‑94 (MQ=60)

           AAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTA                                                                                    >  SRR4302540.283108/1‑94 (MQ=60)

           AAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTA                                                                                    >  SRR4302540.9488413/1‑94 (MQ=60)

            AAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTAT                                                                                   <  SRR4302540.4131416/94‑1 (MQ=60)

            AAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTAT                                                                                   <  SRR4302540.3665373/94‑1 (MQ=60)

             AGCGAAAAATCGCTGATGTCCCGTACAGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATG                                                                                  <  SRR4302540.198303/94‑1 (MQ=60)

              GCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGTCGCCACTGCATCGCTATGG                                                                                 >  SRR4302540.9594274/1‑94 (MQ=60)

              GCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGG                                                                                 >  SRR4302540.6823134/1‑94 (MQ=60)

               CGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGC                                                                                <  SRR4302540.1184786/94‑1 (MQ=60)

               CGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGC                                                                                <  SRR4302540.10146642/94‑1 (MQ=60)

               CGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGC                                                                                <  SRR4302540.7924557/94‑1 (MQ=60)

               CAAAAAATCGCTGGTGCCGCGTACCGGTGGTCTGGCCGCGCGGCGTGGTCAGGCATCCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGC                                                                                <  SRR4302540.7955761/94‑1 (MQ=60)

                GAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCG                                                                               >  SRR4302540.3613593/1‑94 (MQ=60)

                 AAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGA                                                                              <  SRR4302540.6292206/94‑1 (MQ=60)

                 AAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGA                                                                              >  SRR4302540.4029943/1‑94 (MQ=60)

                 AAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGA                                                                              >  SRR4302540.6188360/1‑94 (MQ=60)

                 AAAAAGCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGA                                                                              <  SRR4302540.9710232/94‑1 (MQ=60)

                   AAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAAC                                                                            <  SRR4302540.8163432/94‑1 (MQ=60)

                   AAATCGCTGATGTCCCGTACCGGGGGTCTGGGCTCCCCGCTTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAAC                                                                            <  SRR4302540.2601869/94‑1 (MQ=60)

                    AATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGACCA                                                                           >  SRR4302540.6408501/1‑94 (MQ=60)

                    AATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACA                                                                           <  SRR4302540.4740329/94‑1 (MQ=60)

                     ATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAG                                                                          <  SRR4302540.9018033/94‑1 (MQ=60)

                     ATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAC                                                                          >  SRR4302540.2601215/1‑94 (MQ=60)

                     ATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGCCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAG                                                                          <  SRR4302540.7336092/94‑1 (MQ=60)

                     ATCGCTGATGGCCCGTACCGGTGGTCTGGCCGCGCCGCGTGGTCAGGCATTCTGGCAGGTTCGCGGGCCGACTCTGCATCGCGATGGCGAACAG                                                                          <  SRR4302540.1004643/94‑1 (MQ=60)

                       CGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCT                                                                        >  SRR4302540.4511662/1‑94 (MQ=60)

                       CGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCT                                                                        <  SRR4302540.4960214/94‑1 (MQ=60)

                        GCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTA                                                                       >  SRR4302540.5084551/1‑94 (MQ=60)

                        GCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTA                                                                       >  SRR4302540.9079156/1‑94 (MQ=60)

                        GCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTA                                                                       >  SRR4302540.5084550/1‑94 (MQ=60)

                        GCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGAGGGCCGACACTGCATCGCTATGGCGAACAGCTA                                                                       >  SRR4302540.9846129/1‑94 (MQ=60)

                         CTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTAC                                                                      >  SRR4302540.4103029/1‑94 (MQ=60)

                         CTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTAC                                                                      <  SRR4302540.2157091/94‑1 (MQ=60)

                          TGATGTCCCGTGCCGGTGGTGTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACA                                                                     <  SRR4302540.184618/94‑1 (MQ=60)

                          TGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACA                                                                     >  SRR4302540.8688199/1‑94 (MQ=60)

                           TATGTCCCGTACCGGTGGTGTGGGCGCGCGTTGTGGTGAGGCATACTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAG                                                                    <  SRR4302540.6997091/94‑1 (MQ=60)

                           GATGTCCTGTAGCGGTAGTCTGGTCGCGCCGCGTGGTCAGGCATTCGGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAG                                                                    <  SRR4302540.8320891/94‑1 (MQ=60)

                           GATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAG                                                                    <  SRR4302540.1879622/94‑1 (MQ=60)

                           GATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAG                                                                    <  SRR4302540.825717/94‑1 (MQ=60)

                           GATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAG                                                                    >  SRR4302540.7227220/1‑94 (MQ=60)

                           GATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAG                                                                    <  SRR4302540.1026314/94‑1 (MQ=60)

                            ATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGG                                                                   <  SRR4302540.10035169/94‑1 (MQ=60)

                             gtagcggggccggtggtggggtgtCGCCGCGTGGGCAGGCAGTCTGGCCGGTTCGGGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGG                                                                  <  SRR4302540.1957956/70‑1 (MQ=60)

                             TGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGG                                                                  <  SRR4302540.1957955/94‑1 (MQ=60)

                             TGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGG                                                                  <  SRR4302540.1538358/94‑1 (MQ=60)

                             TGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGG                                                                  <  SRR4302540.4128199/94‑1 (MQ=60)

                             TGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGGTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGG                                                                  >  SRR4302540.280225/1‑94 (MQ=60)

                              GTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGG                                                                 >  SRR4302540.7892430/1‑94 (MQ=60)

                                TCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGA                                                               <  SRR4302540.8839120/94‑1 (MQ=60)

                                 CCGTACCGGTGGTCTGGGCGGGCGGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAA                                                              <  SRR4302540.2362346/94‑1 (MQ=60)

                                 CCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAA                                                              >  SRR4302540.9608564/1‑94 (MQ=60)

                                 CCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAA                                                              >  SRR4302540.7539996/1‑94 (MQ=60)

                                 CCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAA                                                              >  SRR4302540.633443/1‑94 (MQ=60)

                                  cggcccggcgctggGGGCGCGCCGGCTGGTCAGGCTTTCTGGCCTGTAGGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAAT                                                             <  SRR4302540.8509369/80‑1 (MQ=51)

                                  CGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAAT                                                             >  SRR4302540.617686/1‑94 (MQ=60)

                                  CGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAAT                                                             <  SRR4302540.3908380/94‑1 (MQ=60)

                                  CGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAAT                                                             <  SRR4302540.640795/94‑1 (MQ=60)

                                  CGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAAT                                                             <  SRR4302540.8509368/94‑1 (MQ=60)

                                  CGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAAT                                                             >  SRR4302540.7113958/1‑94 (MQ=60)

                                   GTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATT                                                            >  SRR4302540.4371431/1‑94 (MQ=60)

                                    TCCCGGGGGTGTGGGCGCGCCGCGGGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTA                                                           <  SRR4302540.7824990/94‑1 (MQ=60)

                                    TACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTA                                                           <  SRR4302540.7824989/94‑1 (MQ=60)

                                    TACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTA                                                           <  SRR4302540.3901972/94‑1 (MQ=60)

                                     ACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTAC                                                          <  SRR4302540.7511708/94‑1 (MQ=60)

                                     ACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTAC                                                          >  SRR4302540.895203/1‑94 (MQ=60)

                                     ACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTAC                                                          <  SRR4302540.7175065/94‑1 (MQ=60)

                                     ACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGCGAATTAC                                                          >  SRR4302540.8569644/1‑94 (MQ=60)

                                      CCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACG                                                         <  SRR4302540.2188059/94‑1 (MQ=60)

                                      CCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACG                                                         >  SRR4302540.4019317/1‑94 (MQ=60)

                                       CGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGC                                                        >  SRR4302540.7619462/1‑94 (MQ=60)

                                       CGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGCGACTTACGC                                                        >  SRR4302540.4150692/1‑94 (MQ=60)

                                        GGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCT                                                       >  SRR4302540.127805/1‑94 (MQ=60)

                                        GGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCT                                                       >  SRR4302540.2831665/1‑94 (MQ=60)

                                        GGGGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCT                                                       <  SRR4302540.8972153/94‑1 (MQ=60)

                                        GGCGGTTTGGGCGCGCTGCGTGGTCGGGGATTCTGGCTGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCT                                                       <  SRR4302540.8697488/94‑1 (MQ=60)

                                         GTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTG                                                      <  SRR4302540.3261572/94‑1 (MQ=60)

                                         GTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTG                                                      >  SRR4302540.10082391/1‑94 (MQ=60)

                                         GGGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTG                                                      <  SRR4302540.2324667/94‑1 (MQ=60)

                                          TGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAcagccaccaggagcaattccgccgg                                                     >  SRR4302540.1910110/1‑69 (MQ=60)

                                          TGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGG                                                     >  SRR4302540.1910111/1‑94 (MQ=60)

                                           GGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGA                                                    <  SRR4302540.8903007/94‑1 (MQ=60)

                                            GTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAA                                                   <  SRR4302540.2614865/94‑1 (MQ=60)

                                              CTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAG                                                 <  SRR4302540.1498661/94‑1 (MQ=60)

                                              CTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAG                                                 <  SRR4302540.1145026/94‑1 (MQ=60)

                                              CTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAG                                                 >  SRR4302540.2284694/1‑94 (MQ=60)

                                               TGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGG                                                >  SRR4302540.6669150/1‑94 (MQ=60)

                                               TGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGG                                                <  SRR4302540.5104780/94‑1 (MQ=60)

                                                GGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGT                                               >  SRR4302540.1800643/1‑94 (MQ=60)

                                                 GGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTA                                              >  SRR4302540.4955096/1‑94 (MQ=60)

                                                 GCCGCGCCGCGTGTTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTA                                              <  SRR4302540.3796415/94‑1 (MQ=60)

                                                  GCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTAT                                             <  SRR4302540.4442347/94‑1 (MQ=60)

                                                   CGCGCCGCGTGGTCAGGCTTTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATG                                            <  SRR4302540.4315404/94‑1 (MQ=60)

                                                   CGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATG                                            <  SRR4302540.4200062/94‑1 (MQ=60)

                                                    GCTCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGG                                           <  SRR4302540.6809861/94‑1 (MQ=60)

                                                    GCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGG                                           >  SRR4302540.2803378/1‑94 (MQ=60)

                                                    GCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGG                                           >  SRR4302540.2803379/1‑94 (MQ=60)

                                                    GCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGG                                           <  SRR4302540.2643956/94‑1 (MQ=60)

                                                    GCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGG                                           >  SRR4302540.2976858/1‑94 (MQ=60)

                                                    GCGCCGCGTGGTCAGGCATTCTGGCCGGTGCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGG                                           <  SRR4302540.7023054/94‑1 (MQ=60)

                                                     CGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGT                                          >  SRR4302540.2015677/1‑94 (MQ=60)

                                                     CGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGT                                          >  SRR4302540.5325999/1‑94 (MQ=60)

                                                      GCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTT                                         <  SRR4302540.7320918/94‑1 (MQ=60)

                                                        CGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTAT                                       <  SRR4302540.5961680/94‑1 (MQ=60)

                                                        CGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTAT                                       >  SRR4302540.839585/1‑94 (MQ=60)

                                                        CGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTAT                                       >  SRR4302540.2453668/1‑94 (MQ=60)

                                                         GCGTGGTCAGGCATTCTGGCGGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATC                                      <  SRR4302540.325497/94‑1 (MQ=60)

                                                         GCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATC                                      <  SRR4302540.4425060/94‑1 (MQ=60)

                                                         GCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATC                                      <  SRR4302540.9977335/94‑1 (MQ=60)

                                                         GCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATC                                      <  SRR4302540.8190231/94‑1 (MQ=60)

                                                          CGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTAGGCTGGAAAGGTATGGTTATCG                                     >  SRR4302540.4141290/1‑94 (MQ=60)

                                                          CGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCG                                     >  SRR4302540.7286705/1‑94 (MQ=60)

                                                          CGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCG                                     <  SRR4302540.8173776/94‑1 (MQ=60)

                                                           GTGGTCGGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGG                                    <  SRR4302540.1747076/94‑1 (MQ=60)

                                                           GTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGG                                    >  SRR4302540.7460614/1‑94 (MQ=60)

                                                           GTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGG                                    >  SRR4302540.5541314/1‑94 (MQ=60)

                                                            TGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGT                                   >  SRR4302540.3934434/1‑94 (MQ=60)

                                                            TGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGT                                   >  SRR4302540.1218943/1‑94 (MQ=60)

                                                              GTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGC                                 >  SRR4302540.4799233/1‑94 (MQ=60)

                                                              GTCAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGC                                 >  SRR4302540.4017757/1‑94 (MQ=60)

                                                              GTCAGGCACTCTGGCCGGTTCGCGGGCCGACCCTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGC                                 <  SRR4302540.7943898/94‑1 (MQ=60)

                                                                CAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTT                               >  SRR4302540.8996244/1‑94 (MQ=60)

                                                                CAGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTT                               >  SRR4302540.297764/1‑94 (MQ=60)

                                                                 AGGCATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTC                              <  SRR4302540.6084237/94‑1 (MQ=60)

                                                                    GATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGA                           <  SRR4302540.1601973/94‑1 (MQ=60)

                                                                    CATTCTGGCGGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGA                           <  SRR4302540.3881244/94‑1 (MQ=60)

                                                                    CATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGA                           >  SRR4302540.8378891/1‑94 (MQ=60)

                                                                    CATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGA                           >  SRR4302540.7754703/1‑94 (MQ=60)

                                                                    CATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGA                           >  SRR4302540.4726652/1‑94 (MQ=60)

                                                                     ATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAA                          <  SRR4302540.400135/94‑1 (MQ=60)

                                                                     ATTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAA                          >  SRR4302540.1180474/1‑94 (MQ=60)

                                                                      ttgttgcgGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAG                         <  SRR4302540.7123764/86‑1 (MQ=60)

                                                                      TTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAG                         >  SRR4302540.638070/1‑94 (MQ=60)

                                                                      TTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAG                         <  SRR4302540.793761/94‑1 (MQ=60)

                                                                      TTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAG                         <  SRR4302540.1521685/94‑1 (MQ=60)

                                                                      TTCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAG                         <  SRR4302540.5357112/94‑1 (MQ=60)

                                                                       TCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGG                        <  SRR4302540.880943/94‑1 (MQ=60)

                                                                       TCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGG                        <  SRR4302540.9048178/94‑1 (MQ=60)

                                                                       TCTGGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGG                        <  SRR4302540.1217004/94‑1 (MQ=60)

                                                                          ggctggtgtggGGGCCGACACTGCATCGCTATAGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTAC                     <  SRR4302540.5785468/83‑1 (MQ=60)

                                                                          GGCGGGTGCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTAC                     <  SRR4302540.4035895/94‑1 (MQ=60)

                                                                          GGCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTAC                     <  SRR4302540.8485846/94‑1 (MQ=60)

                                                                           GCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACT                    <  SRR4302540.3611822/94‑1 (MQ=60)

                                                                           GCCGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACT                    <  SRR4302540.5303139/94‑1 (MQ=60)

                                                                            CCGTTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTG                   <  SRR4302540.5813736/94‑1 (MQ=60)

                                                                             CGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGA                  >  SRR4302540.3491755/1‑94 (MQ=60)

                                                                             CGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGA                  <  SRR4302540.865314/94‑1 (MQ=60)

                                                                             CGGTTCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGA                  >  SRR4302540.7846269/1‑94 (MQ=60)

                                                                             CGGTGCGCGGGCTGACAGTGCCTCGCTATGGGGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCGTCTGAAGGTACTGA                  <  SRR4302540.865313/94‑1 (MQ=60)

                                                                                 tggaGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTT              <  SRR4302540.5525230/90‑1 (MQ=60)

                                                                                 TCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTT              <  SRR4302540.532791/94‑1 (MQ=60)

                                                                                 TCGCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGCGAGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGcagta              >  SRR4302540.1899524/1‑89 (MQ=60)

                                                                                   GCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAA            >  SRR4302540.5611313/1‑94 (MQ=60)

                                                                                   GCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAA            <  SRR4302540.5409792/94‑1 (MQ=60)

                                                                                   GCGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAA            >  SRR4302540.5611312/1‑94 (MQ=60)

                                                                                    CGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAA           <  SRR4302540.1885423/94‑1 (MQ=60)

                                                                                    CGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAA           <  SRR4302540.1777505/94‑1 (MQ=60)

                                                                                    CGGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAA           <  SRR4302540.1368864/94‑1 (MQ=60)

                                                                                     GGGCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAG          <  SRR4302540.3799998/94‑1 (MQ=60)

                                                                                       GCCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCG        <  SRR4302540.7815508/94‑1 (MQ=60)

                                                                                        CCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGA       >  SRR4302540.3137477/1‑94 (MQ=60)

                                                                                        CCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGA       <  SRR4302540.2831467/94‑1 (MQ=60)

                                                                                        CCGACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGA       >  SRR4302540.5804003/1‑94 (MQ=60)

                                                                                          GACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATT     <  SRR4302540.6387058/94‑1 (MQ=60)

                                                                                          GACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATT     >  SRR4302540.9242013/1‑94 (MQ=60)

                                                                                          GACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATT     >  SRR4302540.2718323/1‑94 (MQ=60)

                                                                                           ACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATTG    <  SRR4302540.275091/94‑1 (MQ=60)

                                                                                           ACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATTG    >  SRR4302540.3846477/1‑94 (MQ=60)

                                                                                           ACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATTG    <  SRR4302540.2948427/94‑1 (MQ=60)

                                                                                           ACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGATAAAGCGATCG    <  SRR4302540.8934054/94‑1 (MQ=60)

                                                                                           ACACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGGACTGAAGTTAAAGCGATTG    >  SRR4302540.8754842/1‑94 (MQ=60)

                                                                                            CACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATTGC   >  SRR4302540.6921917/1‑94 (MQ=60)

                                                                                            CACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATTGC   <  SRR4302540.6635285/94‑1 (MQ=60)

                                                                                            CACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATTGC   >  SRR4302540.6383338/1‑94 (MQ=60)

                                                                                             ACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATTGCC  <  SRR4302540.1394082/94‑1 (MQ=60)

                                                                                             ACTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATTGCC  <  SRR4302540.2427222/94‑1 (MQ=60)

CAAACCGACCGAAAGCGAAAAATCGCTGATGTCCCGTACCGGTGGTCTGGGCGCGCCGCGTGGTCAGGCATTCTGGCCGGTTCGCGGGCCGACGCTGCATCGCTATGGCGAACAGCTACAGGGTGAATTACGCTGGAAAGGTATGGTTATCGGTGCTTCTGAAGGTACTGAAGTTAAAGCGATTGCC  >  NC_000913/3785289‑3785475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`