Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,806,424 G→A T86T (ACG→ACA)  kdtA → 3‑deoxy‑D‑manno‑octulosonic‑acid transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,806,4240GA99.2% 1794.4 / ‑2.6 523T86T (ACG→ACA) kdtA3‑deoxy‑D‑manno‑octulosonic‑acid transferase
Reads supporting (aligned to +/- strand):  ref base G (1/3);  new base A (250/267);  total (252/271)
Fisher's exact test for biased strand distribution p-value = 6.25e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.61e-01

Only 100 of 542 total aligned reads displayed.

CTCCGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACGCCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCG  >  NC_000913/3806334‑3806513
                                                                                          |                                                                                         
  ccgtcGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCaa                                                                                       >  2:8408578/1‑93 (MQ=255)
       ggTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGt                                                                                  <  2:4084489/93‑1 (MQ=255)
       ggTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGt                                                                                  >  1:3995798/1‑93 (MQ=255)
        gTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGtt                                                                                 <  1:1470844/93‑1 (MQ=255)
        gTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGtt                                                                                 <  1:1752973/93‑1 (MQ=255)
         tGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTc                                                                                <  2:3898279/93‑1 (MQ=255)
          gAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCg                                                                               <  1:8284598/93‑1 (MQ=255)
            agctctGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGa                                                                             <  1:7744112/91‑1 (MQ=255)
            aaCTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGa                                                                             <  1:6631122/93‑1 (MQ=255)
               tctGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTTCCGATTTCCGTAACAACCTTGACACCAAACTGTTTGTAgcg                                                                          >  2:12029/1‑93 (MQ=255)
               tctGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAgcg                                                                          <  1:10025306/93‑1 (MQ=255)
               tctGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAgcg                                                                          <  2:2721916/93‑1 (MQ=255)
               tctGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAgcg                                                                          >  1:4681736/1‑93 (MQ=255)
               tctGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAgcg                                                                          >  2:5906765/1‑93 (MQ=255)
               tctGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAgcg                                                                          >  1:8465072/1‑93 (MQ=255)
                ctGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAgcgc                                                                         <  2:8873066/93‑1 (MQ=255)
                 tGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGcgcg                                                                        >  2:1521301/1‑93 (MQ=255)
                  ggcggcAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGt                                                                       >  2:23470/1‑93 (MQ=255)
                   gcggcAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTa                                                                      >  1:3459936/1‑93 (MQ=255)
                   gcggcAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTa                                                                      <  1:7850636/93‑1 (MQ=255)
                   gcggcAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTa                                                                      <  2:578589/93‑1 (MQ=255)
                    cggcAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTAc                                                                     <  2:6520994/93‑1 (MQ=255)
                     ggcAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACa                                                                    >  1:7125009/1‑93 (MQ=255)
                        aaTCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATc                                                                 >  2:143625/1‑93 (MQ=255)
                        aaTCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATc                                                                 <  1:6169280/93‑1 (MQ=255)
                         aTCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCg                                                                >  1:5333583/1‑93 (MQ=255)
                         aTCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCg                                                                >  1:1228170/1‑93 (MQ=255)
                          tCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCgg                                                               >  1:4954042/1‑93 (MQ=255)
                           cccGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCggt                                                              >  2:3210158/1‑92 (MQ=255)
                           cccGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGc                                                              <  1:5211258/93‑1 (MQ=255)
                            ccGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCt                                                             >  2:208573/1‑93 (MQ=255)
                             cGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCtt                                                            >  2:9580728/1‑93 (MQ=255)
                              gTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCttt                                                           <  2:4769191/93‑1 (MQ=255)
                               ttGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGGCACCAACCGGTTCGGAGCGCGTACAATCGGCTTTc                                                          <  1:2201414/93‑1 (MQ=255)
                               ttGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGATCCCAACCGGTTCGGAGCGCGTACAATCGGCtttg                                                          >  1:907327/1‑92 (MQ=255)
                               ttGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTc                                                          >  2:8169199/1‑93 (MQ=255)
                               ttGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTc                                                          <  1:596408/93‑1 (MQ=255)
                                tGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCg                                                         <  2:7231540/93‑1 (MQ=255)
                                tGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCg                                                         >  2:1092135/1‑93 (MQ=255)
                                 ggTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCgg                                                        >  1:7993587/1‑93 (MQ=255)
                                 ggTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCgg                                                        >  2:5364549/1‑93 (MQ=255)
                                  gTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCggg                                                       <  2:7825466/93‑1 (MQ=255)
                                   tGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGa                                                      >  1:2680234/1‑93 (MQ=255)
                                   tGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGa                                                      >  1:2406009/1‑93 (MQ=255)
                                    gcgcgcgcTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGaa                                                     <  1:3804374/93‑1 (MQ=255)
                                       cgctcTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGa                                                  <  1:3166557/93‑1 (MQ=255)
                                       cgcgcTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGa                                                  <  2:9753316/93‑1 (MQ=255)
                                       cgcgcTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGa                                                  <  1:6913559/93‑1 (MQ=255)
                                        gcgcTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCCGATTTCGGGAAAGAt                                                 >  2:1924388/1‑93 (MQ=255)
                                        gcccTGCGTCATCGTTATCCTTATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGAt                                                 <  1:8642428/90‑1 (MQ=255)
                                         cgcgGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATg                                                <  2:4867797/93‑1 (MQ=255)
                                         cgcTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATg                                                >  1:9389168/1‑93 (MQ=255)
                                          gcTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGt                                               >  1:880074/1‑93 (MQ=255)
                                          gcTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGt                                               >  2:8816742/1‑93 (MQ=255)
                                          gcTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGt                                               >  1:310591/1‑93 (MQ=255)
                                           cTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGtt                                              <  2:5251717/93‑1 (MQ=255)
                                           cTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATAGGCTTTCGGGAAGGATGtt                                              >  2:6335374/1‑93 (MQ=255)
                                            tGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTc                                             >  2:5079483/1‑93 (MQ=255)
                                             gCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCa                                            <  2:1582721/93‑1 (MQ=255)
                                              cGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAg                                           >  1:7353045/1‑93 (MQ=255)
                                               gTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGc                                          >  2:2609013/1‑93 (MQ=255)
                                               gTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGc                                          >  2:70306/1‑93 (MQ=255)
                                                 cATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCAc                                        <  1:5481426/93‑1 (MQ=255)
                                                   tCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGCGCGCGTACAATCGGCTTTCGGGTAGGATGTTCAGCCCGt                                      >  2:4650077/1‑93 (MQ=255)
                                                   tCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGt                                      >  2:3538941/1‑93 (MQ=255)
                                                      ttATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTa                                   >  1:2926933/1‑93 (MQ=255)
                                                      ttATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTa                                   >  1:4370253/1‑93 (MQ=255)
                                                       tATCCTGATTTACCGATTACCGTAACAACCATGACGCCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTAt                                  >  2:8522419/1‑93 (MQ=255)
                                                       tATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTAt                                  >  2:4327721/1‑93 (MQ=255)
                                                        aTCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATc                                 >  2:9216719/1‑93 (MQ=255)
                                                         tCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCt                                <  2:7457983/93‑1 (MQ=255)
                                                            tGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCATTCGGGCAGGATCTTCAGCACGTTTATCTGcc                             >  2:2849178/1‑93 (MQ=255)
                                                             gATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCg                            >  1:1068699/1‑93 (MQ=255)
                                                             gATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCg                            <  1:8583318/93‑1 (MQ=255)
                                                             gATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTAAGCACGTTTATCTGCCg                            >  2:2160552/1‑93 (MQ=255)
                                                              aTTTAACGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGt                           <  2:661164/93‑1 (MQ=255)
                                                               tttACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGGCGTa                          >  2:5510941/1‑93 (MQ=255)
                                                               gttACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTa                          <  2:6243028/92‑1 (MQ=255)
                                                                ttACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTAt                         <  1:6354601/93‑1 (MQ=255)
                                                                ttACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTAt                         >  1:6493216/1‑93 (MQ=255)
                                                                 tACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATg                        >  1:9880595/1‑93 (MQ=255)
                                                                  aCCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGa                       >  2:9445125/1‑93 (MQ=255)
                                                                  aCCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGa                       <  2:6805480/93‑1 (MQ=255)
                                                                   ccGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGAt                      <  1:4862494/93‑1 (MQ=255)
                                                                    cGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATc                     <  1:5763011/93‑1 (MQ=255)
                                                                       ttACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGc                  >  1:1570943/1‑93 (MQ=255)
                                                                       ttACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGc                  <  1:3889609/93‑1 (MQ=255)
                                                                       ttACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGc                  <  1:680615/93‑1 (MQ=255)
                                                                          ccGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGccca               >  2:3041956/1‑92 (MQ=255)
                                                                           cGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGa              <  1:5863055/93‑1 (MQ=255)
                                                                           cGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGa              >  2:8275038/1‑93 (MQ=255)
                                                                             tAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGAGGTTCACAACGTTTATCTGCCGTATGATCTGCCCgttc            >  1:419603/1‑90 (MQ=255)
                                                                               acaacCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCa          >  1:2239246/1‑93 (MQ=255)
                                                                                caacCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCAc         <  2:8074252/93‑1 (MQ=255)
                                                                                 aacCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACt        >  2:2253088/1‑93 (MQ=255)
                                                                                  acCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTc       >  1:7679601/1‑93 (MQ=255)
                                                                                  acCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTc       >  2:6452562/1‑93 (MQ=255)
                                                                                     aTGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAAc    >  1:951439/1‑93 (MQ=255)
                                                                                      tGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAAcc   <  1:2079648/93‑1 (MQ=255)
                                                                                       gACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCg  >  2:3677987/1‑93 (MQ=255)
                                                                                          |                                                                                         
CTCCGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACGCCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCG  >  NC_000913/3806334‑3806513

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 282 total aligned reads displayed.
CGTCTCCGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACGCCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCGTTTC  >  NC_000913/3806331‑3806517
                                                                                             |                                                                                             
 GTCTCCGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACAC                                                                                              >  SRR4302540.1666775/1‑94 (MQ=60)
 GTCTCCGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACAC                                                                                              >  SRR4302540.5787856/1‑94 (MQ=60)
  TCTCCGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACC                                                                                             <  SRR4302540.828235/94‑1 (MQ=60)
   CTCCGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCA                                                                                            >  SRR4302540.9153091/1‑94 (MQ=60)
   CTCCGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCA                                                                                            <  SRR4302540.5175212/94‑1 (MQ=60)
    TCCGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAA                                                                                           <  SRR4302540.4706184/94‑1 (MQ=60)
    TCCGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAA                                                                                           >  SRR4302540.8384632/1‑94 (MQ=60)
     CCGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAAC                                                                                          >  SRR4302540.223348/1‑94 (MQ=60)
      CGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACC                                                                                         <  SRR4302540.9232382/94‑1 (MQ=60)
       GTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCG                                                                                        >  SRR4302540.233820/1‑94 (MQ=60)
       GTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCG                                                                                        >  SRR4302540.2597494/1‑94 (MQ=60)
       GTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCG                                                                                        <  SRR4302540.1573852/94‑1 (MQ=60)
         CGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGT                                                                                      >  SRR4302540.1090661/1‑94 (MQ=60)
         CGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGT                                                                                      >  SRR4302540.4038801/1‑94 (MQ=60)
          GGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTT                                                                                     >  SRR4302540.2699717/1‑94 (MQ=60)
           GTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTC                                                                                    >  SRR4302540.3098472/1‑94 (MQ=60)
           GTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTC                                                                                    <  SRR4302540.1486923/94‑1 (MQ=60)
           GTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTC                                                                                    >  SRR4302540.3153992/1‑94 (MQ=60)
           GTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTC                                                                                    <  SRR4302540.1377660/94‑1 (MQ=60)
           GTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTC                                                                                    <  SRR4302540.1771966/94‑1 (MQ=60)
            TGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCG                                                                                   <  SRR4302540.5649226/94‑1 (MQ=60)
              AAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGG                                                                                 >  SRR4302540.8734154/1‑94 (MQ=60)
              AAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGA                                                                                 >  SRR4302540.6561152/1‑94 (MQ=60)
               AGCTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAG                                                                                <  SRR4302540.7834531/94‑1 (MQ=60)
               AACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAG                                                                                <  SRR4302540.4963347/94‑1 (MQ=60)
               AACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAG                                                                                >  SRR4302540.7853930/1‑94 (MQ=60)
               AACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAG                                                                                <  SRR4302540.7834530/94‑1 (MQ=60)
               AACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGGTCGGAG                                                                                >  SRR4302540.4344670/1‑94 (MQ=60)
                ACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGC                                                                               >  SRR4302540.10093834/1‑94 (MQ=60)
                 CTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCG                                                                              <  SRR4302540.1914666/94‑1 (MQ=60)
                 CTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCG                                                                              >  SRR4302540.274204/1‑94 (MQ=60)
                 CTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCG                                                                              <  SRR4302540.4545838/94‑1 (MQ=60)
                 CTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCG                                                                              >  SRR4302540.4731818/1‑94 (MQ=60)
                 CTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCG                                                                              >  SRR4302540.8563356/1‑94 (MQ=60)
                  TCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGC                                                                             <  SRR4302540.10141960/94‑1 (MQ=60)
                   ctgtcggcagtcgcgcgggtgggctcggTGCGTGATCGTTATCCGCATTTACCGATTACCGTAACAACCATGCCACCAACCGGTTCGGAGCGCG                                                                            <  SRR4302540.5432774/66‑1 (MQ=50)
                     GGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTA                                                                          >  SRR4302540.3497594/1‑94 (MQ=60)
                     GGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTA                                                                          <  SRR4302540.4988779/94‑1 (MQ=60)
                      GCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACACCCATGACACCAACCGGTTCGGAGCGCGTAC                                                                         <  SRR4302540.7008377/94‑1 (MQ=60)
                      GCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTAC                                                                         <  SRR4302540.7942371/94‑1 (MQ=60)
                       CGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACA                                                                        <  SRR4302540.3912890/94‑1 (MQ=60)
                        GGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGCACAA                                                                       >  SRR4302540.6697825/1‑94 (MQ=60)
                          GAATCCCGTTGGTGCGCGCGCTGCGTCATCGGTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATC                                                                     <  SRR4302540.3111227/94‑1 (MQ=60)
                           AATCCCGTTGGTGCGCGCGCTGCGTCATTGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCG                                                                    >  SRR4302540.6925208/1‑94 (MQ=60)
                           AATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCG                                                                    >  SRR4302540.8822088/1‑94 (MQ=60)
                           AATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCG                                                                    <  SRR4302540.7432935/94‑1 (MQ=60)
                           AATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCG                                                                    >  SRR4302540.1464554/1‑94 (MQ=60)
                           AATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCG                                                                    <  SRR4302540.6238018/94‑1 (MQ=60)
                           AATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCG                                                                    >  SRR4302540.4290878/1‑94 (MQ=60)
                           AATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCG                                                                    >  SRR4302540.1240719/1‑94 (MQ=60)
                           AATCACGTTGGTGCGGCCGCTGCGTCATCGTTATCCTGATTTCCCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCG                                                                    <  SRR4302540.6794226/94‑1 (MQ=60)
                            ATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGG                                                                   >  SRR4302540.5007569/1‑94 (MQ=60)
                             TCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGC                                                                  <  SRR4302540.6635408/94‑1 (MQ=60)
                              CCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCT                                                                 <  SRR4302540.5268037/94‑1 (MQ=60)
                               CCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTT                                                                <  SRR4302540.1051399/94‑1 (MQ=60)
                                CGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTT                                                               <  SRR4302540.5914805/94‑1 (MQ=60)
                                CGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTT                                                               >  SRR4302540.2663681/1‑94 (MQ=60)
                                 GTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTC                                                              >  SRR4302540.5951116/1‑94 (MQ=60)
                                 GTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTC                                                              >  SRR4302540.148291/1‑94 (MQ=60)
                                 GTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTC                                                              >  SRR4302540.2245675/1‑94 (MQ=60)
                                  TTGGTGCGCGCGCTTCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCG                                                             <  SRR4302540.7181986/94‑1 (MQ=60)
                                  TTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCG                                                             <  SRR4302540.7352112/94‑1 (MQ=60)
                                  TTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCG                                                             >  SRR4302540.8917503/1‑94 (MQ=60)
                                  TTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCG                                                             <  SRR4302540.602812/94‑1 (MQ=60)
                                  TTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCG                                                             <  SRR4302540.9586427/94‑1 (MQ=60)
                                   TGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGG                                                            >  SRR4302540.6712326/1‑94 (MQ=60)
                                   TGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGG                                                            >  SRR4302540.8086642/1‑94 (MQ=60)
                                    TGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGG                                                           <  SRR4302540.8199192/94‑1 (MQ=60)
                                     GTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGA                                                          >  SRR4302540.2431953/1‑94 (MQ=60)
                                      TGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAA                                                         <  SRR4302540.3376049/94‑1 (MQ=60)
                                      TGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAA                                                         <  SRR4302540.4921425/94‑1 (MQ=60)
                                       GCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAG                                                        <  SRR4302540.6262799/94‑1 (MQ=60)
                                       GCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAG                                                        <  SRR4302540.3845810/94‑1 (MQ=60)
                                        CGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGG                                                       <  SRR4302540.7947420/94‑1 (MQ=60)
                                         GCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGA                                                      <  SRR4302540.2242675/94‑1 (MQ=60)
                                          CGCTCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGAT                                                     <  SRR4302540.3200990/94‑1 (MQ=60)
                                          CGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGAT                                                     <  SRR4302540.1500420/94‑1 (MQ=60)
                                          CGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGAT                                                     <  SRR4302540.3200987/94‑1 (MQ=60)
                                          CGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGAT                                                     <  SRR4302540.6990493/94‑1 (MQ=60)
                                           GCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATG                                                    <  SRR4302540.5390962/94‑1 (MQ=60)
                                           GCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATG                                                    >  SRR4302540.9500908/1‑94 (MQ=60)
                                           GCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATG                                                    <  SRR4302540.5160862/94‑1 (MQ=60)
                                           GCCCTGCGTCATCGTTATCCTTATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATG                                                    <  SRR4302540.8742821/94‑1 (MQ=60)
                                           CCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATG                                                    <  SRR4302540.4317072/94‑1 (MQ=60)
                                            CGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGT                                                   >  SRR4302540.313670/1‑94 (MQ=60)
                                            CGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGT                                                   <  SRR4302540.5891188/94‑1 (MQ=60)
                                            CGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGT                                                   >  SRR4302540.889410/1‑94 (MQ=60)
                                              CTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTC                                                 >  SRR4302540.8181851/1‑94 (MQ=60)
                                              CTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTC                                                 >  SRR4302540.5321884/1‑94 (MQ=60)
                                               TGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCA                                                <  SRR4302540.8559924/94‑1 (MQ=60)
                                               TGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCA                                                >  SRR4302540.5549715/1‑94 (MQ=60)
                                                TCGTCATCGTTATCCTGATTTACCGATTACTGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAG                                               <  SRR4302540.4428639/94‑1 (MQ=60)
                                                GCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAG                                               <  SRR4302540.7768339/94‑1 (MQ=60)
                                                GCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAG                                               >  SRR4302540.7435059/1‑94 (MQ=60)
                                                 CGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGC                                              >  SRR4302540.7859848/1‑94 (MQ=60)
                                                  GTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCA                                             >  SRR4302540.9813331/1‑94 (MQ=60)
                                                   TCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGTAGAGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCAG                                            >  SRR4302540.8659566/1‑94 (MQ=60)
                                                   TCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCAC                                            >  SRR4302540.609239/1‑94 (MQ=60)
                                                   TCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCAC                                            <  SRR4302540.6900433/94‑1 (MQ=60)
                                                   TCATCGTTATCCTGATTTACCGATTACCGGAACAGCCAGGACCCCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCAC                                            <  SRR4302540.6900434/94‑1 (MQ=60)
                                                    CATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACG                                           <  SRR4302540.6703877/94‑1 (MQ=60)
                                                    CATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACG                                           >  SRR4302540.2202586/1‑94 (MQ=60)
                                                    CATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACG                                           >  SRR4302540.2202589/1‑94 (MQ=60)
                                                    CATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACG                                           <  SRR4302540.5541761/94‑1 (MQ=60)
                                                     ATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGT                                          >  SRR4302540.3975931/1‑94 (MQ=60)
                                                       CGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCTGAGCGTGTACAATCGGCTTTCGGGTAGGATGTTCAGTACGTTT                                        >  SRR4302540.4170899/1‑94 (MQ=60)
                                                       CGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTT                                        <  SRR4302540.8580049/94‑1 (MQ=60)
                                                       CGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTT                                        >  SRR4302540.5830721/1‑94 (MQ=60)
                                                       CGTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTT                                        <  SRR4302540.9112834/94‑1 (MQ=60)
                                                        GTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAAgcgctagatcggaagagcggttcagcaggaat                                       >  SRR4302540.6299554/1‑62 (MQ=60)
                                                        GTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTA                                       >  SRR4302540.4417730/1‑94 (MQ=60)
                                                        GTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTA                                       >  SRR4302540.8510637/1‑94 (MQ=60)
                                                        GTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTA                                       <  SRR4302540.237860/94‑1 (MQ=60)
                                                        GTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTA                                       >  SRR4302540.2959025/1‑94 (MQ=60)
                                                        GTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTA                                       >  SRR4302540.9373068/1‑94 (MQ=60)
                                                        GTTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTA                                       >  SRR4302540.3171538/1‑94 (MQ=60)
                                                         TTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTAT                                      >  SRR4302540.6850981/1‑94 (MQ=60)
                                                         TTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTAT                                      <  SRR4302540.3864544/94‑1 (MQ=60)
                                                         TTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTAT                                      >  SRR4302540.2174154/1‑94 (MQ=60)
                                                         TTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTAT                                      <  SRR4302540.5352021/94‑1 (MQ=60)
                                                         TTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTAT                                      <  SRR4302540.2724460/94‑1 (MQ=60)
                                                         TTATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTAT                                      <  SRR4302540.652556/94‑1 (MQ=60)
                                                          TATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATT                                     >  SRR4302540.7470340/1‑94 (MQ=60)
                                                          TATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATC                                     <  SRR4302540.5512895/94‑1 (MQ=60)
                                                          TATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATC                                     >  SRR4302540.6300025/1‑94 (MQ=60)
                                                          TATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATC                                     >  SRR4302540.1726475/1‑94 (MQ=60)
                                                           ATCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCT                                    <  SRR4302540.4022862/94‑1 (MQ=60)
                                                            TCCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTG                                   <  SRR4302540.292556/94‑1 (MQ=60)
                                                             CCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGC                                  >  SRR4302540.6108389/1‑94 (MQ=60)
                                                             CCTGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGC                                  >  SRR4302540.10026139/1‑94 (MQ=60)
                                                               TGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCG                                >  SRR4302540.1079589/1‑94 (MQ=60)
                                                               TGATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCG                                <  SRR4302540.6024748/94‑1 (MQ=60)
                                                               TGATTTACCGATTACCGTAACAAACATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCG                                <  SRR4302540.3726599/94‑1 (MQ=60)
                                                                GATTTACCGATTACCGTAACAACCATGACACCACCCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGT                               <  SRR4302540.1174173/94‑1 (MQ=60)
                                                                GATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGT                               <  SRR4302540.8683101/94‑1 (MQ=60)
                                                                 ATTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTA                              >  SRR4302540.5892043/1‑94 (MQ=60)
                                                                  TTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTAT                             >  SRR4302540.6565426/1‑94 (MQ=60)
                                                                  TTTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTAT                             <  SRR4302540.4814764/94‑1 (MQ=60)
                                                                   TTACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATG                            <  SRR4302540.6425368/94‑1 (MQ=60)
                                                                    TACCGATTACCGTAACAACCATGACACCAACCTGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGA                           <  SRR4302540.143826/94‑1 (MQ=60)
                                                                    TACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGA                           <  SRR4302540.8630724/94‑1 (MQ=60)
                                                                    TACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGA                           <  SRR4302540.7287941/94‑1 (MQ=60)
                                                                     TCCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGAT                          <  SRR4302540.1742751/94‑1 (MQ=60)
                                                                     ACCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGAT                          >  SRR4302540.9234802/1‑94 (MQ=60)
                                                                     ACCGATTACCGCAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGAT                          <  SRR4302540.4886517/94‑1 (MQ=60)
                                                                      CCGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATC                         >  SRR4302540.3726115/1‑94 (MQ=60)
                                                                       CGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCT                        <  SRR4302540.9579448/94‑1 (MQ=60)
                                                                       CGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCT                        >  SRR4302540.3873638/1‑94 (MQ=60)
                                                                       CGATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCT                        <  SRR4302540.3448310/94‑1 (MQ=60)
                                                                       CGATTACCGTAACAACCACGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCT                        <  SRR4302540.4938210/94‑1 (MQ=60)
                                                                       CGAATACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCT                        <  SRR4302540.539127/94‑1 (MQ=60)
                                                                        GATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTG                       >  SRR4302540.2475498/1‑94 (MQ=60)
                                                                        GATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTG                       <  SRR4302540.8879642/94‑1 (MQ=60)
                                                                        GATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTG                       <  SRR4302540.8950023/94‑1 (MQ=60)
                                                                        GATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTG                       <  SRR4302540.5407607/94‑1 (MQ=60)
                                                                         ATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGC                      >  SRR4302540.400559/1‑94 (MQ=60)
                                                                         ATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGC                      >  SRR4302540.4177/1‑94 (MQ=60)
                                                                         ATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGC                      >  SRR4302540.3650514/1‑94 (MQ=60)
                                                                         ATTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCCGGAAGGATGATCAGCACGTTTATCTGCCGTATGATCTGC                      >  SRR4302540.7225132/1‑94 (MQ=60)
                                                                          TTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCC                     <  SRR4302540.3931842/94‑1 (MQ=60)
                                                                          TTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCC                     <  SRR4302540.4778428/94‑1 (MQ=60)
                                                                          TTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCC                     <  SRR4302540.687908/94‑1 (MQ=60)
                                                                          TTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCC                     <  SRR4302540.9980791/94‑1 (MQ=60)
                                                                          TTACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCC                     >  SRR4302540.2230767/1‑94 (MQ=60)
                                                                           TACTGTAACATCCATGTCACGAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCC                    <  SRR4302540.6136628/94‑1 (MQ=60)
                                                                           TACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCC                    >  SRR4302540.7484519/1‑94 (MQ=60)
                                                                           TACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCC                    >  SRR4302540.1087989/1‑94 (MQ=60)
                                                                            ACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCG                   >  SRR4302540.4297970/1‑94 (MQ=60)
                                                                            ACCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTCCCGTATGctctggcgg                   >  SRR4302540.7875923/1‑85 (MQ=60)
                                                                             CCGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGA                  >  SRR4302540.8024693/1‑94 (MQ=60)
                                                                              CGTAACAACCATGACACCAACCGGTTCTGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGAT                 <  SRR4302540.1668126/94‑1 (MQ=60)
                                                                              CGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGAT                 >  SRR4302540.1787526/1‑94 (MQ=60)
                                                                              CGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGAT                 <  SRR4302540.8687701/94‑1 (MQ=60)
                                                                              CGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGAT                 <  SRR4302540.2996814/94‑1 (MQ=60)
                                                                              CGTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGAT                 <  SRR4302540.5927883/94‑1 (MQ=60)
                                                                               GTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATG                >  SRR4302540.8714596/1‑94 (MQ=60)
                                                                               GTAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATG                >  SRR4302540.6495678/1‑94 (MQ=60)
                                                                                TAACAGCAATGACACCATCCGGTTCGGAGCGGGTACAATCGGCTTGCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGC               <  SRR4302540.9583213/94‑1 (MQ=60)
                                                                                TAACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGC               >  SRR4302540.8362622/1‑94 (MQ=60)
                                                                                 AACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCA              >  SRR4302540.2263320/1‑94 (MQ=60)
                                                                                 AACAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCA              <  SRR4302540.1546394/94‑1 (MQ=60)
                                                                                   CAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACT            >  SRR4302540.8011091/1‑94 (MQ=60)
                                                                                   CAACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACT            >  SRR4302540.5467094/1‑94 (MQ=60)
                                                                                    AACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTC           >  SRR4302540.4186738/1‑94 (MQ=60)
                                                                                    AACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTC           >  SRR4302540.7766508/1‑94 (MQ=60)
                                                                                    AACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTA           >  SRR4302540.7766506/1‑94 (MQ=60)
                                                                                     ACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCA          <  SRR4302540.1038474/94‑1 (MQ=60)
                                                                                     ACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCA          >  SRR4302540.9684679/1‑94 (MQ=60)
                                                                                     ACCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCA          <  SRR4302540.5783693/94‑1 (MQ=60)
                                                                                      CCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAA         <  SRR4302540.7055952/94‑1 (MQ=60)
                                                                                      CCATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGCATGATCTGCCCGATGCACTCAA         >  SRR4302540.5983099/1‑94 (MQ=60)
                                                                                       CATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAAC        >  SRR4302540.3968266/1‑94 (MQ=60)
                                                                                       CATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAAC        >  SRR4302540.961325/1‑94 (MQ=60)
                                                                                        ATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACC       >  SRR4302540.2085226/1‑94 (MQ=60)
                                                                                        ATGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACC       <  SRR4302540.6788004/94‑1 (MQ=60)
                                                                                         TGACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCG      <  SRR4302540.2101994/94‑1 (MQ=60)
                                                                                           ACACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCGTT    >  SRR4302540.8278321/1‑94 (MQ=60)
                                                                                             ACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCGTTTC  >  SRR4302540.9428006/1‑94 (MQ=60)
                                                                                             ACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCGTTTC  >  SRR4302540.3312521/1‑94 (MQ=60)
                                                                                             ACCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCGTTTC  <  SRR4302540.5400905/94‑1 (MQ=60)
                                                                                             |                                                                                             
CGTCTCCGTCGGTGAAACTCTGGCGGCAATCCCGTTGGTGCGCGCGCTGCGTCATCGTTATCCTGATTTACCGATTACCGTAACAACCATGACGCCAACCGGTTCGGAGCGCGTACAATCGGCTTTCGGGAAGGATGTTCAGCACGTTTATCTGCCGTATGATCTGCCCGATGCACTCAACCGTTTC  >  NC_000913/3806331‑3806517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑