Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,806,842 C→T R226C (CGC→TGC)  kdtA → 3‑deoxy‑D‑manno‑octulosonic‑acid transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,806,8420CT100.0% 1571.7 / NA 427R226C (CGC→TGC) kdtA3‑deoxy‑D‑manno‑octulosonic‑acid transferase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (182/245);  total (182/245)

Only 100 of 464 total aligned reads displayed.

GCAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCCGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTG  >  NC_000913/3806752‑3806931
                                                                                          |                                                                                         
gcAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACgctgcgctgc                                                                                         <  1:6484533/93‑1 (MQ=255)
 cAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCgctgcc                                                                                        <  1:4719415/93‑1 (MQ=255)
 cAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCgctgcc                                                                                        >  1:253079/1‑93 (MQ=255)
  aaaaaaTAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCa                                                                                       <  2:8220521/93‑1 (MQ=255)
   aaaaaTAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAg                                                                                      <  2:4109975/93‑1 (MQ=255)
     aaaTAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTg                                                                                    >  1:8531772/1‑93 (MQ=255)
       ataatCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTggg                                                                                  <  2:9394420/93‑1 (MQ=255)
       ataatCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTggg                                                                                  <  1:4882945/93‑1 (MQ=255)
         aatCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGca                                                                                <  1:2706867/93‑1 (MQ=255)
          atCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGcac                                                                               >  1:9736165/1‑93 (MQ=255)
          atCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGcac                                                                               <  1:3817472/93‑1 (MQ=255)
            cAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGcacca                                                                             <  2:562968/93‑1 (MQ=255)
             aGGTGCCCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTCCTAAAGCCGTGACGCTGCGCTGCCAGTGGGcaccac                                                                            <  1:4541492/93‑1 (MQ=255)
              ggTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAGGCCGTGACGCTGCGCTGCCAGTGGGCACcaca                                                                           <  2:5119006/93‑1 (MQ=255)
               gTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCacac                                                                          <  1:4013236/93‑1 (MQ=255)
               gTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCacac                                                                          >  1:9256845/1‑93 (MQ=255)
               gTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCacac                                                                          >  1:9423603/1‑93 (MQ=255)
               gTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCacac                                                                          >  1:4623613/1‑93 (MQ=255)
                 gACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCg                                                                        >  2:9654943/1‑93 (MQ=255)
                  aCCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCAACACACCGc                                                                       >  2:3377365/1‑93 (MQ=255)
                     gTTACCGGTAGCCTGAATTTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCg                                                                    >  2:8981947/1‑93 (MQ=255)
                     gTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCg                                                                    >  2:6532769/1‑93 (MQ=255)
                      ttACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCgg                                                                   >  1:8273920/1‑93 (MQ=255)
                       tACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTTCGCTGCCAGTGGGCACCACACCCCCCGGt                                                                  <  2:9880396/93‑1 (MQ=255)
                        aCCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTa                                                                 <  1:7631164/93‑1 (MQ=255)
                         ccGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTag                                                                >  2:6782006/1‑92 (MQ=255)
                         ccGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTAt                                                                <  2:3550298/93‑1 (MQ=255)
                         ccGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTAt                                                                <  1:7333256/93‑1 (MQ=255)
                           ggTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATgg                                                              >  2:274656/1‑93 (MQ=255)
                           ggTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATgg                                                              >  2:8764760/1‑93 (MQ=255)
                            gTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCTCTGCCAGGGGGCACCACCCCGCCCGGTATggt                                                             >  2:7506770/1‑92 (MQ=255)
                            gTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGa                                                             >  1:1546453/1‑93 (MQ=255)
                            gTAGCCTAAAATTCGATATTTCTGTCACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGa                                                             <  2:3838846/93‑1 (MQ=255)
                             tAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGAt                                                            >  2:8288083/1‑93 (MQ=255)
                             tAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGAt                                                            <  1:80879/93‑1 (MQ=255)
                             tAGCCTAAATGTCGATATTTCTGTAACGCCGCAGTGGGTTTCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGAt                                                            <  2:9195193/93‑1 (MQ=255)
                              aGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGAtt                                                           <  1:9963262/93‑1 (MQ=255)
                               gCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTg                                                          >  2:2003981/1‑93 (MQ=255)
                               gCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTg                                                          <  1:2936154/93‑1 (MQ=255)
                                  tGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGcca                                                       <  2:7196418/93‑1 (MQ=255)
                                   gAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATCGATTGtcac                                                      >  2:6302236/1‑93 (MQ=255)
                                   gAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGATGCCAGTGGGCACCACACCGCCCGGTATGGATTGccac                                                      <  2:7914367/93‑1 (MQ=255)
                                    aaaTTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGccacc                                                     <  2:1276149/93‑1 (MQ=255)
                                     aaTTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGccacca                                                    <  1:3495911/93‑1 (MQ=255)
                                     aaTTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGccacca                                                    >  1:6294249/1‑93 (MQ=255)
                                     aaTTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGAACCACACCGCCCGGCATGGATTGccacca                                                    >  2:2551603/1‑93 (MQ=255)
                                     aaTTCGATATTTCTGGAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGccacca                                                    <  2:7595396/93‑1 (MQ=255)
                                       ttCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGc                                                  <  2:5392012/93‑1 (MQ=255)
                                         cGATATTTCTGTACCGCCAAAGATGGCTGCTAACGCCGTGACGCTGCGCTGCCAGTGGGCCCCACACCACACGATATGGATTGCCACCAGCAc                                                <  1:8951635/93‑1 (MQ=255)
                                         cGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCAc                                                <  1:6716033/93‑1 (MQ=255)
                                         cGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCAc                                                <  2:3973012/93‑1 (MQ=255)
                                         cGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCAc                                                <  2:8008644/93‑1 (MQ=255)
                                          gATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCAcc                                               >  1:1810750/1‑92 (MQ=255)
                                          gATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACt                                               <  2:4922843/93‑1 (MQ=255)
                                           atatTTATGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTc                                              >  2:2409064/1‑93 (MQ=255)
                                            tatTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGGCGCTGCGCTGCCAGTGGGCACCACGCCGCCCGGTATGGATTGCCACCAGCACTCa                                             <  2:3038054/93‑1 (MQ=255)
                                              tttCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACg                                           >  1:7481933/1‑93 (MQ=255)
                                               ttCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGa                                          <  2:8521787/93‑1 (MQ=255)
                                                tCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCCGCACCCACGaa                                         >  1:6928933/1‑93 (MQ=255)
                                                tCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGaa                                         >  2:4522921/1‑93 (MQ=255)
                                                tCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGaa                                         <  2:1469735/93‑1 (MQ=255)
                                                tCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGaa                                         <  1:9571388/93‑1 (MQ=255)
                                                tCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGaa                                         <  1:7203401/93‑1 (MQ=255)
                                                tCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGaa                                         <  1:1595200/93‑1 (MQ=255)
                                                 cTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAg                                        >  1:9072576/1‑93 (MQ=255)
                                                  tGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAgg                                       >  1:7936363/1‑93 (MQ=255)
                                                   gTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGc                                      <  2:7746059/93‑1 (MQ=255)
                                                   gTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGc                                      >  2:5948395/1‑93 (MQ=255)
                                                      aCGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGaa                                   <  2:4749824/93‑1 (MQ=255)
                                                        gccgcAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAaga                                 >  1:3264356/1‑93 (MQ=255)
                                                          cgcAGTTGGCTGCGAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAagaga                               <  1:418685/93‑1 (MQ=255)
                                                           gcAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAagagag                              <  2:5854805/93‑1 (MQ=255)
                                                            cAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAgt                             <  2:1886666/93‑1 (MQ=255)
                                                            cAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAgt                             <  2:9568298/93‑1 (MQ=255)
                                                                tGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTgtgg                         >  1:1013958/1‑93 (MQ=255)
                                                                tGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTgtgg                         >  2:2181182/1‑93 (MQ=255)
                                                                  gctgctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTgtggtg                       >  2:1796539/1‑93 (MQ=255)
                                                                   ctgctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGa                      >  1:5819289/1‑93 (MQ=255)
                                                                    tgctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGAt                     >  1:7096187/1‑93 (MQ=255)
                                                                     gctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATc                    <  1:1256942/93‑1 (MQ=255)
                                                                      ctAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATcg                   >  2:6959136/1‑93 (MQ=255)
                                                                       tAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATcgc                  >  2:4253869/1‑93 (MQ=255)
                                                                       tAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATcgc                  >  1:2201764/1‑93 (MQ=255)
                                                                       tAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATcgc                  <  2:5328658/93‑1 (MQ=255)
                                                                            ccGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGcac             <  2:6386120/93‑1 (MQ=255)
                                                                              gTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACAt           <  2:2805650/93‑1 (MQ=255)
                                                                              gTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACAt           <  1:6036964/93‑1 (MQ=255)
                                                                              gTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACAt           >  2:7428086/1‑93 (MQ=255)
                                                                               tGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATc          >  1:5469354/1‑93 (MQ=255)
                                                                               tGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATc          <  1:3897701/93‑1 (MQ=255)
                                                                               tGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATc          >  1:2017765/1‑93 (MQ=255)
                                                                                gACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCa         >  1:5620943/1‑93 (MQ=255)
                                                                                gACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCa         <  2:4424576/93‑1 (MQ=255)
                                                                                  cgctgcgctgCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAgg       <  1:8886263/93‑1 (MQ=255)
                                                                                   gctgcgctgcCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGGGTGGTGATCGCCGCCCATCAgga      >  2:8642059/1‑92 (MQ=255)
                                                                                     tGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCAt    <  1:8350972/93‑1 (MQ=255)
                                                                                     tGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCAt    <  2:1577226/93‑1 (MQ=255)
                                                                                     tGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCAt    >  1:6577872/1‑93 (MQ=255)
                                                                                      gcgcTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCAtt   <  1:5361456/93‑1 (MQ=255)
                                                                                       cgctgcCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCCCCGCACACCAGGCAttt  >  1:3120441/1‑92 (MQ=255)
                                                                                          |                                                                                         
GCAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCCGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTG  >  NC_000913/3806752‑3806931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 236 total aligned reads displayed.
GGCGCAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCCGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTAC  >  NC_000913/3806749‑3806935
                                                                                             |                                                                                             
GGCGCAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCT                                                                                               <  SRR4302540.2912123/94‑1 (MQ=60)
  CGCAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGC                                                                                             >  SRR4302540.9009569/1‑94 (MQ=60)
   GCAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCC                                                                                            >  SRR4302540.255524/1‑94 (MQ=60)
     AAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAG                                                                                          <  SRR4302540.3958402/94‑1 (MQ=60)
      AAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGT                                                                                         <  SRR4302540.3981697/94‑1 (MQ=60)
      AAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGT                                                                                         <  SRR4302540.9713145/94‑1 (MQ=60)
      AAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGT                                                                                         <  SRR4302540.9314083/94‑1 (MQ=60)
       AAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTG                                                                                        >  SRR4302540.8630901/1‑94 (MQ=60)
       AAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTG                                                                                        <  SRR4302540.48909/94‑1 (MQ=60)
       AAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTG                                                                                        >  SRR4302540.7597794/1‑94 (MQ=60)
        AAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGG                                                                                       <  SRR4302540.174684/94‑1 (MQ=60)
         AATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGG                                                                                      <  SRR4302540.3613252/94‑1 (MQ=60)
          ATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGC                                                                                     <  SRR4302540.4935389/94‑1 (MQ=60)
          ATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGC                                                                                     >  SRR4302540.9619334/1‑94 (MQ=60)
           TAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGTCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCA                                                                                    >  SRR4302540.6090320/1‑94 (MQ=60)
            AATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCAC                                                                                   <  SRR4302540.2736063/94‑1 (MQ=60)
            AATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCAC                                                                                   >  SRR4302540.9850475/1‑94 (MQ=60)
            AATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCAC                                                                                   <  SRR4302540.6698627/94‑1 (MQ=60)
             ATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACC                                                                                  <  SRR4302540.3859034/94‑1 (MQ=60)
               CAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCAC                                                                                <  SRR4302540.4730651/94‑1 (MQ=60)
                AGGTGCCCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTCCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACA                                                                               <  SRR4302540.4590643/94‑1 (MQ=60)
                AGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTACAGCCGTGACGATGCGCTGCCAGTGGGCACAACA                                                                               >  SRR4302540.8033746/1‑94 (MQ=60)
                AGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACA                                                                               >  SRR4302540.9110331/1‑94 (MQ=60)
                 GGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACAC                                                                              >  SRR4302540.719059/1‑94 (MQ=60)
                 GGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACAC                                                                              >  SRR4302540.4673162/1‑94 (MQ=60)
                 GGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACAC                                                                              >  SRR4302540.9367610/1‑94 (MQ=60)
                 GGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACAC                                                                              >  SRR4302540.9535591/1‑94 (MQ=60)
                  GTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACC                                                                             >  SRR4302540.4509574/1‑94 (MQ=60)
                  GTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACC                                                                             <  SRR4302540.4906567/94‑1 (MQ=60)
                  GTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACC                                                                             <  SRR4302540.1282585/94‑1 (MQ=60)
                   TGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCG                                                                            >  SRR4302540.2687119/1‑94 (MQ=60)
                   TGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCC                                                                            >  SRR4302540.8716001/1‑94 (MQ=60)
                    GACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGC                                                                           >  SRR4302540.7879319/1‑94 (MQ=60)
                    GACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGC                                                                           >  SRR4302540.1595981/1‑94 (MQ=60)
                     ACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCC                                                                          >  SRR4302540.9410045/1‑94 (MQ=60)
                     ACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCC                                                                          <  SRR4302540.9512215/94‑1 (MQ=60)
                      CCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCC                                                                         >  SRR4302540.9131961/1‑94 (MQ=60)
                      CCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCC                                                                         <  SRR4302540.4197224/94‑1 (MQ=60)
                        GTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGG                                                                       <  SRR4302540.5420702/94‑1 (MQ=60)
                        GTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGG                                                                       >  SRR4302540.8370038/1‑94 (MQ=60)
                        GTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGG                                                                       >  SRR4302540.8404044/1‑94 (MQ=60)
                        GTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGG                                                                       >  SRR4302540.6775700/1‑94 (MQ=60)
                         TTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGT                                                                      >  SRR4302540.8378988/1‑94 (MQ=60)
                          TACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTA                                                                     <  SRR4302540.4902100/94‑1 (MQ=60)
                          TACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTA                                                                     <  SRR4302540.3639448/94‑1 (MQ=60)
                           ACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTAT                                                                    <  SRR4302540.7717002/94‑1 (MQ=60)
                           ACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTAT                                                                    <  SRR4302540.2452498/94‑1 (MQ=60)
                           ACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTAT                                                                    <  SRR4302540.340164/94‑1 (MQ=60)
                              GGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGT                                                                 >  SRR4302540.8785733/1‑94 (MQ=60)
                              GGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGA                                                                 <  SRR4302540.5795721/94‑1 (MQ=60)
                              GGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGA                                                                 <  SRR4302540.6872462/94‑1 (MQ=60)
                              GGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGA                                                                 >  SRR4302540.9745846/1‑94 (MQ=60)
                               GTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGAT                                                                <  SRR4302540.2120871/94‑1 (MQ=60)
                               GTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGAT                                                                <  SRR4302540.2465177/94‑1 (MQ=60)
                                TAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATT                                                               <  SRR4302540.3911386/94‑1 (MQ=60)
                                TAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATT                                                               <  SRR4302540.6558334/94‑1 (MQ=60)
                                TAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATT                                                               <  SRR4302540.81726/94‑1 (MQ=60)
                                TAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATT                                                               <  SRR4302540.7551421/94‑1 (MQ=60)
                                 AGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTG                                                              >  SRR4302540.4253592/1‑94 (MQ=60)
                                 AGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTG                                                              >  SRR4302540.4600900/1‑94 (MQ=60)
                                 AGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTG                                                              >  SRR4302540.7362266/1‑94 (MQ=60)
                                 AGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTG                                                              <  SRR4302540.10079509/94‑1 (MQ=60)
                                 AGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTG                                                              <  SRR4302540.7975825/94‑1 (MQ=60)
                                  GCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGC                                                             <  SRR4302540.2968383/94‑1 (MQ=60)
                                   CCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCC                                                            >  SRR4302540.6853970/1‑94 (MQ=60)
                                    CTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCC                                                           >  SRR4302540.2926560/1‑94 (MQ=60)
                                    CTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCA                                                           >  SRR4302540.6507442/1‑94 (MQ=60)
                                    CTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCA                                                           <  SRR4302540.4143797/94‑1 (MQ=60)
                                     TGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCAC                                                          <  SRR4302540.7451336/94‑1 (MQ=60)
                                      GAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACC                                                         <  SRR4302540.842785/94‑1 (MQ=60)
                                       AAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCA                                                        >  SRR4302540.6364330/1‑94 (MQ=60)
                                        AATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAG                                                       <  SRR4302540.2130763/94‑1 (MQ=60)
                                        AATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAG                                                       <  SRR4302540.9166710/94‑1 (MQ=60)
                                        AATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAG                                                       <  SRR4302540.467619/94‑1 (MQ=60)
                                        AATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAG                                                       <  SRR4302540.3533989/94‑1 (MQ=60)
                                         ATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGC                                                      <  SRR4302540.7664261/94‑1 (MQ=60)
                                         ATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGC                                                      <  SRR4302540.7327044/94‑1 (MQ=60)
                                          TTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCC                                                     >  SRR4302540.8562668/1‑94 (MQ=60)
                                          TTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCA                                                     <  SRR4302540.3606274/94‑1 (MQ=60)
                                           TCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCAC                                                    <  SRR4302540.9353084/94‑1 (MQ=60)
                                            TGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACT                                                   <  SRR4302540.60428/94‑1 (MQ=60)
                                            CGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACT                                                   >  SRR4302540.4461496/1‑94 (MQ=60)
                                            CGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACT                                                   <  SRR4302540.6790126/94‑1 (MQ=60)
                                            CGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACT                                                   >  SRR4302540.3213577/1‑94 (MQ=60)
                                            CGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACT                                                   <  SRR4302540.4632906/94‑1 (MQ=60)
                                            CGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACT                                                   >  SRR4302540.5995652/1‑94 (MQ=60)
                                            CGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACC                                                   >  SRR4302540.1830499/1‑94 (MQ=60)
                                             GATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTC                                                  <  SRR4302540.3897806/94‑1 (MQ=60)
                                              ATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCA                                                 <  SRR4302540.4753152/94‑1 (MQ=60)
                                               TATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCAC                                                <  SRR4302540.4065023/94‑1 (MQ=60)
                                               TATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCAC                                                <  SRR4302540.8543695/94‑1 (MQ=60)
                                               TATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCAC                                                >  SRR4302540.6316880/1‑94 (MQ=60)
                                                ATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCCCCAGCACACACG                                               >  SRR4302540.7565450/1‑94 (MQ=60)
                                                ATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACG                                               >  SRR4302540.7565448/1‑94 (MQ=60)
                                                ATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACG                                               <  SRR4302540.3455419/94‑1 (MQ=60)
                                                  TTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCCGCACCCACGAA                                             >  SRR4302540.7006037/1‑94 (MQ=60)
                                                  TTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAA                                             <  SRR4302540.10062976/94‑1 (MQ=60)
                                                  TTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAA                                             <  SRR4302540.7383333/94‑1 (MQ=60)
                                                  TTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAA                                             <  SRR4302540.9828924/94‑1 (MQ=60)
                                                  TTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAA                                             >  SRR4302540.8273170/1‑94 (MQ=60)
                                                   TCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAG                                            <  SRR4302540.7283708/94‑1 (MQ=60)
                                                   TCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAG                                            <  SRR4302540.5545428/94‑1 (MQ=60)
                                                   TCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAG                                            <  SRR4302540.6622730/94‑1 (MQ=60)
                                                   TCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAG                                            >  SRR4302540.9181530/1‑94 (MQ=60)
                                                   TCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAG                                            <  SRR4302540.2824943/94‑1 (MQ=60)
                                                   TCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAG                                            <  SRR4302540.1612630/94‑1 (MQ=60)
                                                   TCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAG                                            <  SRR4302540.9684463/94‑1 (MQ=60)
                                                    CTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGG                                           >  SRR4302540.8028859/1‑94 (MQ=60)
                                                    CTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGG                                           >  SRR4302540.3038653/1‑94 (MQ=60)
                                                    CTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGG                                           >  SRR4302540.5585744/1‑94 (MQ=60)
                                                    CTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGG                                           <  SRR4302540.2510056/94‑1 (MQ=60)
                                                    CTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGG                                           <  SRR4302540.9012464/94‑1 (MQ=60)
                                                     TGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGC                                          <  SRR4302540.9881430/94‑1 (MQ=60)
                                                     TGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGC                                          >  SRR4302540.8952377/1‑94 (MQ=60)
                                                     TGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGC                                          >  SRR4302540.1570051/1‑94 (MQ=60)
                                                     TGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAAGC                                          >  SRR4302540.2633193/1‑94 (MQ=60)
                                                      GTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCG                                         <  SRR4302540.7383405/94‑1 (MQ=60)
                                                        AACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAA                                       <  SRR4302540.811507/94‑1 (MQ=60)
                                                         ACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAG                                      <  SRR4302540.10089702/94‑1 (MQ=60)
                                                         ACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAG                                      <  SRR4302540.6232815/94‑1 (MQ=60)
                                                         ACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAG                                      <  SRR4302540.9138290/94‑1 (MQ=60)
                                                          CGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGA                                     <  SRR4302540.920482/94‑1 (MQ=60)
                                                          CGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGA                                     >  SRR4302540.3299973/1‑94 (MQ=60)
                                                          CGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGA                                     >  SRR4302540.5738795/1‑94 (MQ=60)
                                                           ccaGCAGTTGGATGCTCACGCCGTGACGCTGCGCTGCGAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAG                                    <  SRR4302540.5862233/91‑1 (MQ=60)
                                                           GCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAG                                    <  SRR4302540.8568954/94‑1 (MQ=60)
                                                           GCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAG                                    <  SRR4302540.4648503/94‑1 (MQ=60)
                                                            CCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGA                                   <  SRR4302540.7202687/94‑1 (MQ=60)
                                                             CGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGCGAG                                  >  SRR4302540.3012729/1‑94 (MQ=60)
                                                             CGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAG                                  <  SRR4302540.6524601/94‑1 (MQ=60)
                                                             CGCAGTTGGCTGCGAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAG                                  <  SRR4302540.423085/94‑1 (MQ=60)
                                                              GCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGT                                 >  SRR4302540.7088935/1‑94 (MQ=60)
                                                              GCAGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAACGCTAAGAGAGG                                 >  SRR4302540.3942461/1‑94 (MQ=60)
                                                               CACTTGGCTGCTAAAGCCGTGACGCTACGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTG                                <  SRR4302540.2691786/94‑1 (MQ=60)
                                                                AGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGT                               <  SRR4302540.6617034/94‑1 (MQ=60)
                                                                AGTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGT                               <  SRR4302540.5202466/94‑1 (MQ=60)
                                                                 GTTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTG                              <  SRR4302540.10305/94‑1 (MQ=60)
                                                                  TTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGG                             >  SRR4302540.1845948/1‑94 (MQ=60)
                                                                  TTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGG                             >  SRR4302540.1024236/1‑94 (MQ=60)
                                                                  TTGGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGG                             <  SRR4302540.6901423/94‑1 (MQ=60)
                                                                    GGTTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTG                           <  SRR4302540.1714705/94‑1 (MQ=60)
                                                                    GGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTG                           <  SRR4302540.6413100/94‑1 (MQ=60)
                                                                    GGCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTG                           <  SRR4302540.4143999/94‑1 (MQ=60)
                                                                     GCTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGA                          >  SRR4302540.5883616/1‑94 (MQ=60)
                                                                      CTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGACGAGAGTGTGGTGAT                         <  SRR4302540.6792315/94‑1 (MQ=60)
                                                                      CTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGAT                         >  SRR4302540.7175156/1‑94 (MQ=60)
                                                                      CTGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGCGTGGTGAT                         >  SRR4302540.1874122/1‑94 (MQ=60)
                                                                       TGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCAGCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATC                        >  SRR4302540.1538003/1‑94 (MQ=60)
                                                                       TGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATC                        <  SRR4302540.1045150/94‑1 (MQ=60)
                                                                       TGCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATC                        <  SRR4302540.6767931/94‑1 (MQ=60)
                                                                       TACTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATC                        <  SRR4302540.6655871/94‑1 (MQ=60)
                                                                        gataaaacctTGACGCTGCGCTGCCAGTGGGCAGCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCG                       <  SRR4302540.179836/84‑1 (MQ=60)
                                                                        GCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCG                       >  SRR4302540.499677/1‑94 (MQ=60)
                                                                        GCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCG                       >  SRR4302540.7483739/1‑94 (MQ=60)
                                                                        GCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCG                       <  SRR4302540.1269825/94‑1 (MQ=60)
                                                                        GCTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCG                       >  SRR4302540.1678634/1‑94 (MQ=60)
                                                                         CTAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGC                      >  SRR4302540.2225545/1‑94 (MQ=60)
                                                                          TAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCC                     >  SRR4302540.7725346/1‑94 (MQ=60)
                                                                          TAAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCC                     >  SRR4302540.9652792/1‑94 (MQ=60)
                                                                           AAAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCG                    >  SRR4302540.1516635/1‑94 (MQ=60)
                                                                            AAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAGGGCGAAGAGAGTCTGGTGATCGCCGC                   >  SRR4302540.3044235/1‑94 (MQ=60)
                                                                            AAGCCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGC                   >  SRR4302540.9671099/1‑94 (MQ=60)
                                                                               CCGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACA                >  SRR4302540.8322864/1‑94 (MQ=60)
                                                                                CGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACAT               <  SRR4302540.5460891/94‑1 (MQ=60)
                                                                                CGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACAT               >  SRR4302540.9611378/1‑94 (MQ=60)
                                                                                CGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACAT               <  SRR4302540.7242793/94‑1 (MQ=60)
                                                                                CGTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGGGATCGCCGCACAT               >  SRR4302540.2497126/1‑94 (MQ=60)
                                                                                 GTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATC              >  SRR4302540.2039575/1‑94 (MQ=60)
                                                                                 GTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATC              <  SRR4302540.6103983/94‑1 (MQ=60)
                                                                                 GTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATC              >  SRR4302540.5529556/1‑94 (MQ=60)
                                                                                 GTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATC              >  SRR4302540.6546440/1‑94 (MQ=60)
                                                                                 GTGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGAGTGGTGATCGCCGCACATC              >  SRR4302540.4765121/1‑94 (MQ=60)
                                                                                  TGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCA             >  SRR4302540.5682785/1‑94 (MQ=60)
                                                                                  TGACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCA             <  SRR4302540.3940000/94‑1 (MQ=60)
                                                                                   GACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAG            >  SRR4302540.2010562/1‑94 (MQ=60)
                                                                                   GACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAG            <  SRR4302540.5655194/94‑1 (MQ=60)
                                                                                    ACGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGG           <  SRR4302540.7063425/94‑1 (MQ=60)
                                                                                     CGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTTCCACCAGCACCCACGAAGGCGCAGAGAGTGTGGTGATCGCCGCCCATCAGGC          >  SRR4302540.1392460/1‑94 (MQ=60)
                                                                                     CGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGC          >  SRR4302540.8603033/1‑94 (MQ=60)
                                                                                     CGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGC          >  SRR4302540.5123877/1‑94 (MQ=60)
                                                                                     CGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGC          <  SRR4302540.159655/94‑1 (MQ=60)
                                                                                     CGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGC          >  SRR4302540.1392459/1‑94 (MQ=60)
                                                                                     CGCTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGC          <  SRR4302540.8989130/94‑1 (MQ=60)
                                                                                       CTGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCAT        >  SRR4302540.6650729/1‑94 (MQ=60)
                                                                                        TGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATT       >  SRR4302540.5827722/1‑94 (MQ=60)
                                                                                        TGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATT       <  SRR4302540.350361/94‑1 (MQ=60)
                                                                                        TGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATT       <  SRR4302540.8224419/94‑1 (MQ=60)
                                                                                        TGCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATT       <  SRR4302540.3984423/94‑1 (MQ=60)
                                                                                         GCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTG      >  SRR4302540.3154546/1‑94 (MQ=60)
                                                                                         GCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTG      <  SRR4302540.5420343/94‑1 (MQ=60)
                                                                                         GCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTG      <  SRR4302540.5432634/94‑1 (MQ=60)
                                                                                         GCGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCCCCGCACACCAGGCATTT      >  SRR4302540.3154545/1‑94 (MQ=60)
                                                                                          CGCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGT     <  SRR4302540.3176228/94‑1 (MQ=60)
                                                                                           GCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTT    >  SRR4302540.3526363/1‑94 (MQ=60)
                                                                                           GCTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTT    >  SRR4302540.6823764/1‑94 (MQ=60)
                                                                                            CTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTA   >  SRR4302540.2142596/1‑94 (MQ=60)
                                                                                            CTGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTA   <  SRR4302540.3246188/94‑1 (MQ=60)
                                                                                             TGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTAC  <  SRR4302540.5868452/94‑1 (MQ=60)
                                                                                             TGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTAC  <  SRR4302540.7318361/94‑1 (MQ=60)
                                                                                             TGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTAC  <  SRR4302540.69830/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGCGCAAAAAATAATCAGGTGACCGTTACCGGTAGCCTGAAATTCGATATTTCTGTAACGCCGCAGTTGGCTGCTAAAGCCGTGACGCTGCGCCGCCAGTGGGCACCACACCGCCCGGTATGGATTGCCACCAGCACTCACGAAGGCGAAGAGAGTGTGGTGATCGCCGCACATCAGGCATTGTTAC  >  NC_000913/3806749‑3806935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑