Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,817,156	T→C	S550G (AGT→GGT)	yicF ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,817,156	0	T	C	99.8%	1516.7 / NA	466	S550G (AGT→GGT)	yicF	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (216/249); total (217/249)
Fisher's exact test for biased strand distribution p-value = 4.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 479 total aligned reads displayed.

TACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT  >  NC_000913/3817066‑3817245

 aCGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGcc                                                                                        <  2:2707592/93‑1 (MQ=255)

  cGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGccc                                                                                       <  1:4349466/93‑1 (MQ=255)

      ttAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGct                                                                                   <  1:1906536/93‑1 (MQ=255)

        aaGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttc                                                                                 <  1:45355/93‑1 (MQ=255)

         aGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttct                                                                                <  2:5787024/93‑1 (MQ=255)

          gCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttctt                                                                               >  2:8712163/1‑93 (MQ=255)

          gCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttctt                                                                               <  2:5530294/93‑1 (MQ=255)

            tGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGa                                                                             >  2:1784805/1‑93 (MQ=255)

              ggATTACCGGTCTTTTACTACAGCCACGTAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGAtt                                                                           <  2:7661689/93‑1 (MQ=255)

              ggATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGAtt                                                                           <  1:3144351/93‑1 (MQ=255)

              ggATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGAtt                                                                           >  2:9379037/1‑93 (MQ=255)

               gATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGAttt                                                                          <  1:1401387/93‑1 (MQ=255)

               gATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGAttt                                                                          >  2:1083084/1‑93 (MQ=255)

               gATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGAttt                                                                          >  1:3829475/1‑93 (MQ=255)

               gATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGAttt                                                                          <  1:6270240/93‑1 (MQ=255)

                aTTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTg                                                                         >  2:8934554/1‑93 (MQ=255)

                 ttACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGATGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTgc                                                                        <  2:2534900/93‑1 (MQ=255)

                  tACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTCCTTGATTTgcg                                                                       >  1:8508313/1‑93 (MQ=255)

                   aCCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTgcgc                                                                      <  2:9849637/93‑1 (MQ=255)

                    ccGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCa                                                                     >  1:9471587/1‑93 (MQ=255)

                    ccGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCa                                                                     <  1:3439013/93‑1 (MQ=255)

                    ccGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCa                                                                     <  2:8262110/93‑1 (MQ=255)

                    ccGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTCCGCa                                                                     >  1:7837688/1‑93 (MQ=255)

                      ggTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAtt                                                                   <  1:6692923/93‑1 (MQ=255)

                      ggTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAtt                                                                   <  1:5768857/93‑1 (MQ=255)

                        tCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCCtttt                                                                 >  2:7110665/1‑93 (MQ=255)

                        tCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAtttt                                                                 <  2:386025/93‑1 (MQ=255)

                          ttttACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttcc                                                               >  1:9250486/1‑93 (MQ=255)

                          ttttACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttcc                                                               <  1:3775203/93‑1 (MQ=255)

                           tttACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttcct                                                              >  2:5682864/1‑93 (MQ=255)

                             tactacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttccttc                                                            <  1:9713196/93‑1 (MQ=255)

                              actacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttccttcc                                                           <  2:1312660/93‑1 (MQ=255)

                              actacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGAGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttccttcc                                                           >  2:290283/1‑93 (MQ=255)

                               ctacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCa                                                          <  1:3623855/93‑1 (MQ=255)

                               ctacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCa                                                          <  2:5197450/93‑1 (MQ=255)

                               ctacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCa                                                          >  2:2133964/1‑93 (MQ=255)

                                 acAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAtt                                                        >  2:9113717/1‑93 (MQ=255)

                                   aGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCa                                                      <  1:6975779/93‑1 (MQ=255)

                                   aGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCa                                                      <  1:5645473/93‑1 (MQ=255)

                                    gCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCaa                                                     <  2:3983734/93‑1 (MQ=255)

                                    gCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCaa                                                     >  1:2511416/1‑93 (MQ=255)

                                     ccACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAAt                                                    <  2:1514290/93‑1 (MQ=255)

                                     ccACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAAt                                                    <  2:4169008/93‑1 (MQ=255)

                                       aCGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATaa                                                  >  1:7219228/1‑93 (MQ=255)

                                       aCGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATaa                                                  <  1:8140937/93‑1 (MQ=255)

                                       aCGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATaa                                                  >  1:2019688/1‑93 (MQ=255)

                                        cGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAc                                                 <  2:4625678/93‑1 (MQ=255)

                                        cGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAc                                                 >  2:7794359/1‑93 (MQ=255)

                                         gAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAcc                                                >  2:808521/1‑93 (MQ=255)

                                          aaGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAATCt                                               >  1:8547353/1‑93 (MQ=255)

                                          aaGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCt                                               >  1:9090405/1‑93 (MQ=255)

                                          aaGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCt                                               <  1:1835756/93‑1 (MQ=255)

                                           aGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTg                                              <  2:1737429/93‑1 (MQ=255)

                                           aGGAAACTAAGGTTCAGAACCTGTGATCTGCTGCGGAGCCAGCCAACCGCTCAGCTTCTTGATTTTGGCATTTTCCTTCCATTCAATaaaccg                                              >  2:2028506/1‑89 (MQ=255)

                                            ggACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGt                                             >  2:6813372/1‑93 (MQ=255)

                                            ggACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGt                                             <  1:485074/93‑1 (MQ=255)

                                            ggACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGt                                             >  2:3207289/1‑93 (MQ=255)

                                            ggACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGt                                             <  1:8737863/93‑1 (MQ=255)

                                             gACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTc                                            <  2:8765734/93‑1 (MQ=255)

                                             gACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTc                                            >  1:755084/1‑93 (MQ=255)

                                              acacTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCt                                           <  2:9642044/93‑1 (MQ=255)

                                                  tAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGgcg                                       >  1:8018894/1‑93 (MQ=255)

                                                      gTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTc                                   >  2:7582413/1‑93 (MQ=255)

                                                      gTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTc                                   <  1:6400746/93‑1 (MQ=255)

                                                      gTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTc                                   >  1:6101957/1‑93 (MQ=255)

                                                        tCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTCGCGCCTccc                                 >  2:4556635/1‑93 (MQ=255)

                                                          aaaaCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGa                               >  2:2346429/1‑93 (MQ=255)

                                                            aaCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATc                             >  2:1573077/1‑93 (MQ=255)

                                                            aaCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATc                             <  2:850136/93‑1 (MQ=255)

                                                            aaCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATc                             <  2:1215135/93‑1 (MQ=255)

                                                             aCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATcc                            <  1:6133073/93‑1 (MQ=255)

                                                             aCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATcc                            >  1:5417144/1‑93 (MQ=255)

                                                             aCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATcc                            <  1:459563/93‑1 (MQ=255)

                                                              ccTGTGATCTGCTGGGCAGCCACCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCa                           >  2:7390230/1‑93 (MQ=255)

                                                               cTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAg                          <  2:5978674/93‑1 (MQ=255)

                                                               cTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAg                          >  1:2340051/1‑93 (MQ=255)

                                                               cTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAg                          <  1:1533478/93‑1 (MQ=255)

                                                                tgtgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAgc                         >  1:2195516/1‑92 (MQ=255)

                                                                tgtgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGt                         >  2:3623617/1‑93 (MQ=255)

                                                                 gtgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTc                        >  2:8412630/1‑93 (MQ=255)

                                                                 gtgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTc                        >  2:6300071/1‑93 (MQ=255)

                                                                  tgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTcc                       <  1:8382122/93‑1 (MQ=255)

                                                                    aTCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTcccc                     <  1:7725750/93‑1 (MQ=255)

                                                                     tCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTCTCTGGCGCGTCACGACCCAGTCCCCg                    >  2:6148780/1‑93 (MQ=255)

                                                                      ctgctgGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCgg                   <  1:5065869/93‑1 (MQ=255)

                                                                       tgctgGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGc                  >  1:2796555/1‑93 (MQ=255)

                                                                        gctgGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCCGCa                 >  1:8900644/1‑93 (MQ=255)

                                                                           gggCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgct              >  2:3547228/1‑93 (MQ=255)

                                                                                gccagccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCtgctgc         >  1:5289190/1‑93 (MQ=255)

                                                                                gccagccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCtgctgc         >  2:8877306/1‑93 (MQ=255)

                                                                                 ccagccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGcc        <  1:7916967/93‑1 (MQ=255)

                                                                                 ccagccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGcc        <  1:10011415/93‑1 (MQ=255)

                                                                                  cagccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCa       <  1:4126920/93‑1 (MQ=255)

                                                                                    gccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGa     >  2:4933387/1‑93 (MQ=255)

                                                                                     ccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGaa    <  1:2889430/93‑1 (MQ=255)

                                                                                      caACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAAc   <  1:9582991/93‑1 (MQ=255)

                                                                                      caACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAAc   <  2:7215073/93‑1 (MQ=255)

                                                                                      caACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAAc   <  1:6864874/93‑1 (MQ=255)

                                                                                      caACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAAc   <  1:4473259/93‑1 (MQ=255)

                                                                                       aaCCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACt  >  1:1140667/1‑93 (MQ=255)

TACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT  >  NC_000913/3817066‑3817245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 263 total aligned reads displayed.

CGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTC  >  NC_000913/3817063‑3817249

CGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACC                                                                                                >  SRR4302540.2137335/1‑94 (MQ=60)

CGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACC                                                                                                >  SRR4302540.1965730/1‑94 (MQ=60)

CGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACC                                                                                                <  SRR4302540.1741929/94‑1 (MQ=60)

 GCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCG                                                                                               >  SRR4302540.416687/1‑94 (MQ=60)

   TGCGCCCTAAGCTGTGATTACCGGTCTTTTACTACATCCACGAAGGACACTAAGGTGCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCC                                                                                             <  SRR4302540.7941959/94‑1 (MQ=60)

    ACGCCTTAAGCTGGTATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCC                                                                                            >  SRR4302540.2891220/1‑94 (MQ=60)

    ACGCCTTAAGCTGGTATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCC                                                                                            >  SRR4302540.2891219/1‑94 (MQ=60)

    ACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCC                                                                                            <  SRR4302540.3698688/94‑1 (MQ=60)

     CGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCA                                                                                           <  SRR4302540.4396783/94‑1 (MQ=60)

      GCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAG                                                                                          >  SRR4302540.3054726/1‑94 (MQ=60)

       CCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGC                                                                                         >  SRR4302540.8626901/1‑94 (MQ=60)

       CCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGC                                                                                         >  SRR4302540.6174663/1‑94 (MQ=60)

       CCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGC                                                                                         >  SRR4302540.2693783/1‑94 (MQ=60)

       CCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGC                                                                                         >  SRR4302540.9693804/1‑94 (MQ=60)

        CTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCT                                                                                        >  SRR4302540.857006/1‑94 (MQ=60)

        CTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCT                                                                                        >  SRR4302540.3198499/1‑94 (MQ=60)

         TTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTT                                                                                       <  SRR4302540.5582353/94‑1 (MQ=60)

         TTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTT                                                                                       <  SRR4302540.2203788/94‑1 (MQ=60)

         TTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTT                                                                                       <  SRR4302540.1927373/94‑1 (MQ=60)

          TAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTC                                                                                      >  SRR4302540.3817987/1‑94 (MQ=60)

           AAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCT                                                                                     <  SRR4302540.45821/94‑1 (MQ=60)

            AGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTT                                                                                    <  SRR4302540.9771533/94‑1 (MQ=60)

            AGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTT                                                                                    <  SRR4302540.2107061/94‑1 (MQ=60)

            AGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTT                                                                                    <  SRR4302540.7995374/94‑1 (MQ=60)

             GCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTG                                                                                   <  SRR4302540.5427115/94‑1 (MQ=60)

              CTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGA                                                                                  >  SRR4302540.56734/1‑94 (MQ=60)

               TGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGAT                                                                                 >  SRR4302540.1437235/1‑94 (MQ=60)

               TGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGAT                                                                                 <  SRR4302540.1925178/94‑1 (MQ=60)

                GGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATT                                                                                <  SRR4302540.560362/94‑1 (MQ=60)

                GGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATT                                                                                <  SRR4302540.319755/94‑1 (MQ=60)

                 GGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTT                                                                               <  SRR4302540.418502/94‑1 (MQ=60)

                 GGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTT                                                                               >  SRR4302540.3871149/1‑94 (MQ=60)

                 GGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTT                                                                               >  SRR4302540.8966196/1‑94 (MQ=60)

                 GGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTT                                                                               <  SRR4302540.7129546/94‑1 (MQ=60)

                 GGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTT                                                                               <  SRR4302540.7920562/94‑1 (MQ=60)

                  GATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTG                                                                              <  SRR4302540.1416460/94‑1 (MQ=60)

                  GATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTG                                                                              <  SRR4302540.6340004/94‑1 (MQ=60)

                  GATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTG                                                                              <  SRR4302540.441737/94‑1 (MQ=60)

                   ATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGC                                                                             <  SRR4302540.7988560/94‑1 (MQ=60)

                    TTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTCCTTGATTTGCG                                                                            >  SRR4302540.8607197/1‑94 (MQ=60)

                     TACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGC                                                                           <  SRR4302540.5988638/94‑1 (MQ=60)

                      ACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCA                                                                          <  SRR4302540.4937147/94‑1 (MQ=60)

                      ACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCA                                                                          >  SRR4302540.9583932/1‑94 (MQ=60)

                      ACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCA                                                                          >  SRR4302540.2399964/1‑94 (MQ=60)

                       GCGGTCTTTTACTACAGCCACGAAGGACACTAAGTTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAT                                                                         <  SRR4302540.6588275/94‑1 (MQ=60)

                       CCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAT                                                                         <  SRR4302540.8120932/94‑1 (MQ=60)

                       CCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAT                                                                         <  SRR4302540.4814215/94‑1 (MQ=60)

                       CCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAT                                                                         <  SRR4302540.655442/94‑1 (MQ=60)

                       CCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAT                                                                         <  SRR4302540.3476397/94‑1 (MQ=60)

                        CGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATT                                                                        >  SRR4302540.4056934/1‑94 (MQ=60)

                        CGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATT                                                                        <  SRR4302540.8904012/94‑1 (MQ=60)

                        CGGTCTTTTACTACAGCCACGAAAGACACTAAGGGTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATT                                                                        >  SRR4302540.7033924/1‑94 (MQ=60)

                         GGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTT                                                                       <  SRR4302540.5832568/94‑1 (MQ=60)

                         GGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTT                                                                       >  SRR4302540.4526465/1‑94 (MQ=60)

                         GGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTT                                                                       >  SRR4302540.7770834/1‑94 (MQ=60)

                          GTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTT                                                                      >  SRR4302540.7512359/1‑94 (MQ=60)

                          GTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTT                                                                      <  SRR4302540.9411573/94‑1 (MQ=60)

                          GTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTT                                                                      <  SRR4302540.1417104/94‑1 (MQ=60)

                           TCTTTTACTACAGCCACGAAGGACACTAAGGTTCAACACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTC                                                                     <  SRR4302540.1687911/94‑1 (MQ=60)

                           TCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTC                                                                     >  SRR4302540.10141/1‑94 (MQ=60)

                            CTTTTACTACAGCCACGAAGGACACTAATGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCC                                                                    <  SRR4302540.4820098/94‑1 (MQ=60)

                            CTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCC                                                                    >  SRR4302540.9361221/1‑94 (MQ=60)

                            CTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCC                                                                    >  SRR4302540.9762173/1‑94 (MQ=60)

                             TTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCT                                                                   >  SRR4302540.5466734/1‑94 (MQ=60)

                             TTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCT                                                                   <  SRR4302540.1115596/94‑1 (MQ=60)

                             TTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCT                                                                   <  SRR4302540.3816390/94‑1 (MQ=60)

                              TTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGCCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTT                                                                  <  SRR4302540.6412116/94‑1 (MQ=60)

                               TTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTC                                                                 >  SRR4302540.9196738/1‑94 (MQ=60)

                               TTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTC                                                                 <  SRR4302540.1531328/94‑1 (MQ=60)

                               TTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTC                                                                 <  SRR4302540.5784124/94‑1 (MQ=60)

                               TTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTC                                                                 >  SRR4302540.7055992/1‑94 (MQ=60)

                                TACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCC                                                                <  SRR4302540.9827340/94‑1 (MQ=60)

                                  CTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAT                                                              <  SRR4302540.3663510/94‑1 (MQ=60)

                                  CTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAT                                                              >  SRR4302540.1034047/1‑94 (MQ=60)

                                  CTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAT                                                              <  SRR4302540.2822262/94‑1 (MQ=60)

                                  CTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAT                                                              <  SRR4302540.4541413/94‑1 (MQ=60)

                                    ACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCGTTTTCCTTCCATTC                                                            >  SRR4302540.2327586/1‑94 (MQ=60)

                                     CAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCA                                                           >  SRR4302540.7372460/1‑94 (MQ=60)

                                     CAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCA                                                           <  SRR4302540.4259737/94‑1 (MQ=60)

                                     CAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCA                                                           <  SRR4302540.4259736/94‑1 (MQ=60)

                                      AGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAA                                                          <  SRR4302540.3193655/94‑1 (MQ=60)

                                      AGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAA                                                          >  SRR4302540.2538540/1‑94 (MQ=60)

                                      AGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAA                                                          <  SRR4302540.7053294/94‑1 (MQ=60)

                                       GCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAAT                                                         >  SRR4302540.9844897/1‑94 (MQ=60)

                                       GCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAAT                                                         <  SRR4302540.4105426/94‑1 (MQ=60)

                                        CCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCCTTCAATA                                                        >  SRR4302540.8745385/1‑94 (MQ=60)

                                        CCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATA                                                        >  SRR4302540.2304081/1‑94 (MQ=60)

                                        CCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATA                                                        >  SRR4302540.8385923/1‑94 (MQ=60)

                                         CACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAA                                                       <  SRR4302540.1177732/94‑1 (MQ=60)

                                         CACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAA                                                       >  SRR4302540.7299691/1‑94 (MQ=60)

                                         CACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAA                                                       >  SRR4302540.4345054/1‑94 (MQ=60)

                                         CACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAA                                                       >  SRR4302540.2041517/1‑94 (MQ=60)

                                          ACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAC                                                      <  SRR4302540.8235430/94‑1 (MQ=60)

                                          ACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAC                                                      >  SRR4302540.201105/1‑94 (MQ=60)

                                            GAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAATCT                                                    >  SRR4302540.8646651/1‑94 (MQ=60)

                                            GAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCT                                                    <  SRR4302540.8229136/94‑1 (MQ=60)

                                            GAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCT                                                    >  SRR4302540.8646650/1‑94 (MQ=60)

                                            GAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCT                                                    <  SRR4302540.5740130/94‑1 (MQ=60)

                                            GAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCT                                                    >  SRR4302540.9199614/1‑94 (MQ=60)

                                            GAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCT                                                    <  SRR4302540.2321210/94‑1 (MQ=60)

                                             GAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTG                                                   <  SRR4302540.3557760/94‑1 (MQ=60)

                                             AAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTG                                                   <  SRR4302540.16965/94‑1 (MQ=60)

                                               GGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTC                                                 >  SRR4302540.763137/1‑94 (MQ=60)

                                               GGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTC                                                 <  SRR4302540.8839306/94‑1 (MQ=60)

                                                GACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCT                                                <  SRR4302540.1154312/94‑1 (MQ=60)

                                                GACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCT                                                >  SRR4302540.9659838/1‑94 (MQ=60)

                                                 ACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTG                                               <  SRR4302540.3005066/94‑1 (MQ=60)

                                                 ACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTG                                               <  SRR4302540.6326445/94‑1 (MQ=60)

                                                  CACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGG                                              >  SRR4302540.9356722/1‑94 (MQ=60)

                                                   ACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGC                                             >  SRR4302540.1991172/1‑94 (MQ=60)

                                                   ACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGC                                             <  SRR4302540.989210/94‑1 (MQ=60)

                                                   ACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGC                                             >  SRR4302540.3512170/1‑94 (MQ=60)

                                                    CTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCG                                            >  SRR4302540.8112161/1‑94 (MQ=60)

                                                    CTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCG                                            >  SRR4302540.4961341/1‑94 (MQ=60)

                                                    CTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCG                                            >  SRR4302540.7763559/1‑94 (MQ=60)

                                                    CTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCG                                            <  SRR4302540.940801/94‑1 (MQ=60)

                                                        GGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC                                        >  SRR4302540.6169899/1‑94 (MQ=60)

                                                        GGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC                                        >  SRR4302540.8083936/1‑94 (MQ=60)

                                                        GGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC                                        <  SRR4302540.1284720/94‑1 (MQ=60)

                                                         GTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑C                                      >  SRR4302540.8429058/1‑94 (MQ=60)

                                                         GTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑C                                      <  SRR4302540.3028573/94‑1 (MQ=60)

                                                         GTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑C                                      <  SRR4302540.6471994/94‑1 (MQ=60)

                                                          TTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CC                                     >  SRR4302540.1926827/1‑94 (MQ=60)

                                                           TCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCG                                    <  SRR4302540.288090/94‑1 (MQ=60)

                                                            CAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGA                                   >  SRR4302540.5117938/1‑94 (MQ=60)

                                                            CAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGA                                   >  SRR4302540.813327/1‑94 (MQ=60)

                                                             AAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGAT                                  <  SRR4302540.3971881/94‑1 (MQ=60)

                                                              AAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATC                                 >  SRR4302540.5902477/1‑94 (MQ=60)

                                                              AAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATC                                 <  SRR4302540.4489774/94‑1 (MQ=60)

                                                              AAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATC                                 <  SRR4302540.6850259/94‑1 (MQ=60)

                                                              AAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATC                                 <  SRR4302540.3723306/94‑1 (MQ=60)

                                                              AAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATC                                 >  SRR4302540.3838661/1‑94 (MQ=60)

                                                               AACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCC                                >  SRR4302540.5476713/1‑94 (MQ=60)

                                                               AACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCC                                <  SRR4302540.6960776/94‑1 (MQ=60)

                                                                ACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCA                               <  SRR4302540.8757082/94‑1 (MQ=60)

                                                                ACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCA                               <  SRR4302540.464469/94‑1 (MQ=60)

                                                                ACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCA                               <  SRR4302540.9756828/94‑1 (MQ=60)

                                                                ACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCA                               <  SRR4302540.6201381/94‑1 (MQ=60)

                                                                ACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCA                               <  SRR4302540.2414424/94‑1 (MQ=60)

                                                                 CCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAG                              <  SRR4302540.5497641/94‑1 (MQ=60)

                                                                  CTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGT                             >  SRR4302540.4634725/1‑94 (MQ=60)

                                                                  CTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGT                             <  SRR4302540.1550451/94‑1 (MQ=60)

                                                                  CTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGC                             >  SRR4302540.3172581/1‑94 (MQ=60)

                                                                  CTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGC                             >  SRR4302540.2219228/1‑94 (MQ=60)

                                                                   TGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTC                            >  SRR4302540.8648393/1‑94 (MQ=60)

                                                                   TGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTC                            >  SRR4302540.3598036/1‑94 (MQ=60)

                                                                   TGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTC                            >  SRR4302540.827295/1‑94 (MQ=60)

                                                                   TGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTC                            >  SRR4302540.5228560/1‑94 (MQ=60)

                                                                    GTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGTTTTGCGCCTTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGGCC                           >  SRR4302540.5776298/1‑94 (MQ=60)

                                                                    GTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCC                           >  SRR4302540.4905654/1‑94 (MQ=60)

                                                                     TGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCC                          <  SRR4302540.8479383/94‑1 (MQ=60)

                                                                     TGATCTGCTGGGCAGCCAGCCAACCACCCAGCCTCTTGATTTGAGCATTATCTTTTCATTCACTAACCTGTCTAGCGCGTCACCGA‑CCAGTCCC                          >  SRR4302540.5257261/1‑94 (MQ=26)

                                                                      GATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCC                         <  SRR4302540.802301/94‑1 (MQ=60)

                                                                       ATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCG                        >  SRR4302540.1892322/1‑94 (MQ=60)

                                                                       ATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCG                        >  SRR4302540.8853785/1‑94 (MQ=60)

                                                                        TCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGG                       >  SRR4302540.2067396/1‑94 (MQ=60)

                                                                         CTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGC                      <  SRR4302540.5120640/94‑1 (MQ=60)

                                                                         CTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGC                      <  SRR4302540.6227017/94‑1 (MQ=60)

                                                                         CTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGC                      >  SRR4302540.627526/1‑94 (MQ=60)

                                                                          TGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCA                     <  SRR4302540.9130929/94‑1 (MQ=60)

                                                                          TGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCA                     >  SRR4302540.9253871/1‑94 (MQ=60)

                                                                          TGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCCGCA                     >  SRR4302540.9003678/1‑94 (MQ=60)

                                                                           GCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAG                    <  SRR4302540.460327/94‑1 (MQ=60)

                                                                           GCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAG                    <  SRR4302540.4605481/94‑1 (MQ=60)

                                                                           GCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAG                    <  SRR4302540.2412719/94‑1 (MQ=60)

                                                                           GCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAG                    <  SRR4302540.6659160/94‑1 (MQ=60)

                                                                           GCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAG                    <  SRR4302540.960549/94‑1 (MQ=60)

                                                                             TGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCT                  <  SRR4302540.6440908/94‑1 (MQ=60)

                                                                             TGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCT                  <  SRR4302540.8592665/94‑1 (MQ=60)

                                                                             TGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCT                  <  SRR4302540.7868346/94‑1 (MQ=60)

                                                                             TGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCT                  >  SRR4302540.8632501/1‑94 (MQ=60)

                                                                             TGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCT                  <  SRR4302540.7868347/94‑1 (MQ=60)

                                                                                GCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCT               <  SRR4302540.6404326/94‑1 (MQ=60)

                                                                                GCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCT               <  SRR4302540.583163/94‑1 (MQ=60)

                                                                                 CAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTG              >  SRR4302540.2696776/1‑94 (MQ=60)

                                                                                 CAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTG              <  SRR4302540.4841184/94‑1 (MQ=60)

                                                                                  AGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGC             >  SRR4302540.7858514/1‑94 (MQ=60)

                                                                                  AGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGC             >  SRR4302540.3818356/1‑94 (MQ=60)

                                                                                  AGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGC             >  SRR4302540.5347001/1‑94 (MQ=60)

                                                                                  AGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGC             >  SRR4302540.1578022/1‑94 (MQ=60)

                                                                                   GCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCC            >  SRR4302540.4398549/1‑94 (MQ=60)

                                                                                    CCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCA           >  SRR4302540.8011792/1‑94 (MQ=60)

                                                                                    CCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCA           <  SRR4302540.10127987/94‑1 (MQ=60)

                                                                                     CAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTA‑CCGATCCAGTCCCCGGCAGCTGCTGCCAA          >  SRR4302540.9131247/1‑94 (MQ=60)

                                                                                      AGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGA         <  SRR4302540.771791/94‑1 (MQ=60)

                                                                                       GCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAA        >  SRR4302540.6933116/1‑94 (MQ=60)

                                                                                        CCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAAC       <  SRR4302540.2920904/94‑1 (MQ=60)

                                                                                        CCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAGTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAAC       <  SRR4302540.542953/94‑1 (MQ=60)

                                                                                         CAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT      <  SRR4302540.2895234/94‑1 (MQ=60)

                                                                                         CAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT      <  SRR4302540.7278352/94‑1 (MQ=60)

                                                                                         CAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT      <  SRR4302540.6178074/94‑1 (MQ=60)

                                                                                         CAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT      <  SRR4302540.9696142/94‑1 (MQ=60)

                                                                                         CAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT      >  SRR4302540.7327136/1‑94 (MQ=60)

                                                                                         CAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT      <  SRR4302540.6940955/94‑1 (MQ=60)

                                                                                         CAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT      <  SRR4302540.4521776/94‑1 (MQ=60)

                                                                                         CAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT      <  SRR4302540.6827138/94‑1 (MQ=60)

                                                                                          AACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTG     >  SRR4302540.9726918/1‑94 (MQ=60)

                                                                                          AACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTG     >  SRR4302540.9470416/1‑94 (MQ=60)

                                                                                          AACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTG     >  SRR4302540.9356810/1‑94 (MQ=60)

                                                                                           ACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGC    <  SRR4302540.6794233/94‑1 (MQ=60)

CGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC‑CCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCTC  >  NC_000913/3817063‑3817249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`