Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,817,156 |
T→C |
S550G (AGT→GGT) |
yicF ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,817,156 | 0 | T | C | 100.0%
| 865.8
/ NA
| 267 | S550G (AGT→GGT) | yicF | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (121/146); total (121/146) |
Only 100 of 274 total aligned reads displayed.
TACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT > NC_000913/3817066‑3817245
|
tACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGc > 1:1875319/1‑93 (MQ=255)
aCGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGcc < 1:2609670/93‑1 (MQ=255)
aCGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGcc > 2:4985371/1‑93 (MQ=255)
cGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGccc < 2:822434/93‑1 (MQ=255)
gCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCa < 1:2716265/93‑1 (MQ=255)
ccTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAg > 2:1043981/1‑93 (MQ=255)
cTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCCGc > 1:5754050/1‑93 (MQ=255)
ttAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGct < 1:3233162/93‑1 (MQ=255)
ttAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGct < 1:407915/93‑1 (MQ=255)
ttAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGct > 1:2134831/1‑93 (MQ=255)
ttAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGct > 2:3655138/1‑93 (MQ=255)
ttAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGct > 2:5110682/1‑93 (MQ=255)
aaGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttc > 2:2186793/1‑93 (MQ=255)
gCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttctt < 1:4694200/93‑1 (MQ=255)
gCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttctt < 1:2540537/93‑1 (MQ=255)
gCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttctt < 2:5965096/93‑1 (MQ=255)
gCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGcttctt > 2:742954/1‑93 (MQ=255)
cTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTg > 2:382178/1‑93 (MQ=255)
tGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGa > 1:1045721/1‑93 (MQ=255)
ggATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGAtt < 2:4802039/93‑1 (MQ=255)
ggATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGAtt < 2:1856903/93‑1 (MQ=255)
gATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAACCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGAttt < 2:5384712/93‑1 (MQ=255)
gATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGAttt < 2:2430163/93‑1 (MQ=255)
tttACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAGCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTg < 1:3756772/92‑1 (MQ=255)
aTTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTg < 2:4381443/93‑1 (MQ=255)
aTTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTg < 1:6146274/93‑1 (MQ=255)
ttACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTgc < 2:4976540/93‑1 (MQ=255)
ttACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTgc > 1:3147621/1‑93 (MQ=255)
tACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTgcg > 2:1598263/1‑93 (MQ=255)
aCCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAACCCTGTGATCTGCTGGGCAGCCAGCCAACCGACCAGCTTCTTGATTTgcgc < 2:6134851/93‑1 (MQ=255)
ggTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAtt > 1:2803767/1‑93 (MQ=255)
gTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAttt < 1:4160877/93‑1 (MQ=255)
tCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAtttt < 1:1795929/93‑1 (MQ=255)
tCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCAtttt < 1:4708044/93‑1 (MQ=255)
cTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttc < 1:2456576/93‑1 (MQ=255)
tactacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttccttc < 2:5482852/93‑1 (MQ=255)
actacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttccttcc < 1:2031877/93‑1 (MQ=255)
actacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTttccttcc < 1:216753/93‑1 (MQ=255)
ctacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCa > 2:1246959/1‑93 (MQ=255)
ctacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCa < 2:35051/93‑1 (MQ=255)
tacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAt > 1:3627154/1‑93 (MQ=255)
tacAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGAGCATTTTCCTTCCAt > 1:5476294/1‑93 (MQ=255)
cAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTc < 1:971949/93‑1 (MQ=255)
gCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCaa < 2:4336384/93‑1 (MQ=255)
ccACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAAt < 2:6286178/93‑1 (MQ=255)
aCGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATaa > 2:3951913/1‑93 (MQ=255)
aCGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATaa > 1:5136027/1‑93 (MQ=255)
cGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAc < 2:4864738/93‑1 (MQ=255)
gAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAACAAcc > 1:4633566/1‑93 (MQ=255)
aaGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCt > 2:2025042/1‑93 (MQ=255)
aGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTg > 2:4735680/1‑93 (MQ=255)
ggACACTAAGGTTCAAAACCTGTGATCTGCTGGGCGGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGt < 2:4664894/93‑1 (MQ=255)
gACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTc < 1:3961720/93‑1 (MQ=255)
cacTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTg < 2:1104598/93‑1 (MQ=255)
acTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTgg < 1:1965548/93‑1 (MQ=255)
cTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGgc > 1:709093/1‑93 (MQ=255)
cTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGgc > 1:1273145/1‑93 (MQ=255)
cTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGgc > 1:2297504/1‑93 (MQ=255)
cTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGgc > 2:2215680/1‑93 (MQ=255)
tAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGgcg > 1:4458372/1‑93 (MQ=255)
aaGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGgcgc < 1:1366121/93‑1 (MQ=255)
gTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTc < 2:3342005/93‑1 (MQ=255)
gTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTc < 1:5309781/93‑1 (MQ=255)
ttCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTcc > 2:4084341/1‑93 (MQ=255)
ttCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTcc > 1:457808/1‑93 (MQ=255)
tCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTccc < 2:586250/93‑1 (MQ=255)
cAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCg < 1:4478541/93‑1 (MQ=255)
cAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCg < 1:1168213/93‑1 (MQ=255)
aaaaCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGa > 1:3066173/1‑93 (MQ=255)
aaaCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGAt > 2:2322312/1‑93 (MQ=255)
aaCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATc > 2:489061/1‑93 (MQ=255)
aaCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATc > 2:4503122/1‑93 (MQ=255)
ccTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCa > 2:2497152/1‑93 (MQ=255)
ccTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCa > 1:4014594/1‑93 (MQ=255)
cTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAg > 1:594390/1‑93 (MQ=255)
cTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAg > 1:3038833/1‑93 (MQ=255)
gtgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTc > 2:3089555/1‑93 (MQ=255)
gtgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTc < 1:5857934/93‑1 (MQ=255)
gtgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTc < 1:4378321/93‑1 (MQ=255)
tgATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTcc > 1:4843873/1‑93 (MQ=255)
gATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTccc > 2:32515/1‑93 (MQ=255)
aTCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTcccc < 2:5931770/93‑1 (MQ=255)
aTCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTcccc < 1:5194441/93‑1 (MQ=255)
gggCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgct < 2:296964/93‑1 (MQ=255)
ggCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgctg < 2:1743065/93‑1 (MQ=255)
gCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgctgc < 2:4007748/93‑1 (MQ=255)
cagccagcCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgctgct > 2:1355326/1‑93 (MQ=255)
cagccagcCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAgctgct < 1:785424/93‑1 (MQ=255)
gccagccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATACCCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCtgctgc < 2:3870278/93‑1 (MQ=255)
gccagccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCtgctgc > 1:953383/1‑93 (MQ=255)
ccagccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGcc < 1:1018873/93‑1 (MQ=255)
ccagccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGcc < 2:1704694/93‑1 (MQ=255)
cagccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCa > 1:6003855/1‑93 (MQ=255)
gccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGa > 2:4828869/1‑93 (MQ=255)
gccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGa < 1:2913268/93‑1 (MQ=255)
ccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGaa < 1:1565263/93‑1 (MQ=255)
ccaACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGaa < 1:5038584/93‑1 (MQ=255)
caACCGCCCAGCTTCTTGATTTGCGCTTTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAAc < 2:3448886/93‑1 (MQ=255)
aaCCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACt < 1:6151662/93‑1 (MQ=255)
aaCCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACt < 2:2803767/93‑1 (MQ=255)
|
TACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT > NC_000913/3817066‑3817245
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCT > NC_000913/3817063‑3817248
|
CGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACC < SRR4302533.5520799/94‑1 (MQ=60)
CGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACC < SRR4302533.1654498/94‑1 (MQ=60)
CGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACC < SRR4302533.3030239/94‑1 (MQ=60)
CGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACC < SRR4302533.4779544/94‑1 (MQ=60)
GCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCG < SRR4302533.5729297/94‑1 (MQ=60)
GCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCG > SRR4302533.1430345/1‑94 (MQ=60)
CTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGC > SRR4302533.1886745/1‑94 (MQ=60)
CTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGC > SRR4302533.468441/1‑94 (MQ=60)
CTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGC > SRR4302533.5932609/1‑94 (MQ=60)
TACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCC > SRR4302533.5992095/1‑94 (MQ=60)
ACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCC < SRR4302533.2625690/94‑1 (MQ=60)
ACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCC < SRR4302533.1463805/94‑1 (MQ=60)
ACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCC < SRR4302533.5000537/94‑1 (MQ=60)
GCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAG > SRR4302533.4522058/1‑94 (MQ=60)
GCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAG < SRR4302533.2200528/94‑1 (MQ=60)
GCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAG < SRR4302533.823907/94‑1 (MQ=60)
GCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAG < SRR4302533.2732942/94‑1 (MQ=60)
CCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCCGC > SRR4302533.5788766/1‑94 (MQ=60)
CTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCT > SRR4302533.2147995/1‑94 (MQ=60)
CTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACGAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCT < SRR4302533.2517405/94‑1 (MQ=60)
TTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAACACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTT > SRR4302533.413577/1‑94 (MQ=60)
TTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTT < SRR4302533.4688303/94‑1 (MQ=60)
TTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTT < SRR4302533.410366/94‑1 (MQ=60)
TTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTT < SRR4302533.3253085/94‑1 (MQ=60)
TTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTT < SRR4302533.1342711/94‑1 (MQ=60)
TTAAGCTGGGATTACCGGTCTTTTACTACAGACACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCGGCCAGCCAACCGCGCAGCTT > SRR4302533.2806661/1‑94 (MQ=60)
TAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTC < SRR4302533.1050271/94‑1 (MQ=60)
AGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTT > SRR4302533.804205/1‑94 (MQ=60)
AGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTT > SRR4302533.2331978/1‑94 (MQ=60)
GCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTG < SRR4302533.3992298/94‑1 (MQ=60)
GCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTG < SRR4302533.5882238/94‑1 (MQ=60)
GCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTG < SRR4302533.4722645/94‑1 (MQ=60)
GCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTG < SRR4302533.2556176/94‑1 (MQ=60)
CTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGA > SRR4302533.1051867/1‑94 (MQ=60)
GGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATT < SRR4302533.5261196/94‑1 (MQ=60)
GGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATT > SRR4302533.1881934/1‑94 (MQ=60)
TTTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAGCCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGC < SRR4302533.3779799/94‑1 (MQ=60)
ATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGC > SRR4302533.3166974/1‑94 (MQ=60)
ATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGC < SRR4302533.6183279/94‑1 (MQ=60)
TTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCG < SRR4302533.675556/94‑1 (MQ=60)
TTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCG < SRR4302533.1600115/94‑1 (MQ=60)
TACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGC > SRR4302533.1188999/1‑94 (MQ=60)
ACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCA > SRR4302533.2149240/1‑94 (MQ=60)
CGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATT > SRR4302533.2821021/1‑94 (MQ=60)
CGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATT > SRR4302533.2085636/1‑94 (MQ=60)
GGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTT > SRR4302533.3072888/1‑94 (MQ=60)
GTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTT < SRR4302533.4186094/94‑1 (MQ=60)
GTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTT > SRR4302533.1003281/1‑94 (MQ=60)
TCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTC < SRR4302533.4736579/94‑1 (MQ=60)
TCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTC < SRR4302533.1806858/94‑1 (MQ=60)
TCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTC < SRR4302533.4736578/94‑1 (MQ=60)
CTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCC < SRR4302533.2471736/94‑1 (MQ=60)
CTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCC < SRR4302533.4649489/94‑1 (MQ=60)
CTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCC < SRR4302533.2093676/94‑1 (MQ=60)
TTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTT < SRR4302533.78981/94‑1 (MQ=60)
TACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCC > SRR4302533.1927319/1‑94 (MQ=60)
ACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCA < SRR4302533.2044414/94‑1 (MQ=60)
ACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCA > SRR4302533.2874442/1‑94 (MQ=60)
ACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCA < SRR4302533.218113/94‑1 (MQ=60)
CTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAT > SRR4302533.5113479/1‑94 (MQ=60)
CTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAT > SRR4302533.2453360/1‑94 (MQ=60)
CTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCAT > SRR4302533.3649473/1‑94 (MQ=60)
CTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGAGCATTTTCCTTCCAT > SRR4302533.5509305/1‑94 (MQ=60)
TACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATT < SRR4302533.462487/94‑1 (MQ=60)
TACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATT < SRR4302533.5082640/94‑1 (MQ=60)
TACAGCCACGAAGGACACTAAGGTTCAAAACCTCTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATT < SRR4302533.3337661/94‑1 (MQ=60)
ACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTC < SRR4302533.2870721/94‑1 (MQ=60)
CAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCA < SRR4302533.618913/94‑1 (MQ=60)
CAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCA < SRR4302533.977655/94‑1 (MQ=60)
CCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATA > SRR4302533.1842933/1‑94 (MQ=60)
CACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAA > SRR4302533.5167060/1‑94 (MQ=60)
CACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAA < SRR4302533.5958665/94‑1 (MQ=60)
ACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAC < SRR4302533.4483193/94‑1 (MQ=60)
CGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAACAACC > SRR4302533.4661644/1‑94 (MQ=60)
AGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGT > SRR4302533.752298/1‑94 (MQ=60)
GGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTC > SRR4302533.2525309/1‑94 (MQ=60)
GACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCT < SRR4302533.4835921/94‑1 (MQ=60)
GACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCT < SRR4302533.3985858/94‑1 (MQ=60)
ACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTG < SRR4302533.2602305/94‑1 (MQ=60)
CACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGG < SRR4302533.5734158/94‑1 (MQ=60)
CACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGG < SRR4302533.3248440/94‑1 (MQ=60)
CACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGG < SRR4302533.3023780/94‑1 (MQ=60)
ACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGC > SRR4302533.713281/1‑94 (MQ=60)
ACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGC > SRR4302533.2311734/1‑94 (MQ=60)
ACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGC > SRR4302533.1280764/1‑94 (MQ=60)
ACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGC > SRR4302533.5329030/1‑94 (MQ=60)
ACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGC < SRR4302533.1977556/94‑1 (MQ=60)
CTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCG > SRR4302533.4485336/1‑94 (MQ=60)
TAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGC > SRR4302533.4512579/1‑94 (MQ=60)
AAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCG < SRR4302533.1374334/94‑1 (MQ=60)
AGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGT > SRR4302533.2993915/1‑94 (MQ=60)
AGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGT < SRR4302533.6187361/94‑1 (MQ=60)
GGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC > SRR4302533.5740875/1‑94 (MQ=60)
GGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTC < SRR4302533.3162612/94‑1 (MQ=60)
GTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCC < SRR4302533.5341602/94‑1 (MQ=60)
GTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCC > SRR4302533.460545/1‑94 (MQ=60)
GTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCC > SRR4302533.1108870/1‑94 (MQ=60)
TCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCG > SRR4302533.3101120/1‑94 (MQ=60)
CAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGA < SRR4302533.4505637/94‑1 (MQ=60)
CAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGA > SRR4302533.3085007/1‑94 (MQ=60)
CAAAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGA < SRR4302533.1175221/94‑1 (MQ=60)
AAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATC > SRR4302533.1389925/1‑94 (MQ=60)
AAACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATC > SRR4302533.1997950/1‑94 (MQ=60)
ACCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCA > SRR4302533.4039043/1‑94 (MQ=60)
CCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAG > SRR4302533.3057428/1‑94 (MQ=60)
CCTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAG > SRR4302533.597895/1‑94 (MQ=60)
CTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGT > SRR4302533.4252953/1‑94 (MQ=60)
CTGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGT > SRR4302533.2153935/1‑94 (MQ=60)
TGTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTC > SRR4302533.6039310/1‑94 (MQ=60)
GTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCC > SRR4302533.4873231/1‑94 (MQ=60)
GTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCC < SRR4302533.5893347/94‑1 (MQ=60)
GTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCC < SRR4302533.4404755/94‑1 (MQ=60)
GTGATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCC > SRR4302533.2683967/1‑94 (MQ=60)
ATCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCG < SRR4302533.5225772/94‑1 (MQ=60)
TCTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGG > SRR4302533.3249421/1‑94 (MQ=60)
CTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGC > SRR4302533.2038650/1‑94 (MQ=60)
CTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGC > SRR4302533.6062546/1‑94 (MQ=60)
CTGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGC > SRR4302533.1054443/1‑94 (MQ=60)
TGCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCA < SRR4302533.6132725/94‑1 (MQ=60)
GCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAG < SRR4302533.2735860/94‑1 (MQ=60)
GCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAG < SRR4302533.4384012/94‑1 (MQ=60)
GCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAG < SRR4302533.4744985/94‑1 (MQ=60)
GCTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAG > SRR4302533.3812011/1‑94 (MQ=60)
CTGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGC > SRR4302533.4976777/1‑94 (MQ=60)
TGGGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCT < SRR4302533.1249083/94‑1 (MQ=60)
GGCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGC < SRR4302533.5436408/94‑1 (MQ=60)
GCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCT > SRR4302533.4113726/1‑94 (MQ=60)
GCAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCT < SRR4302533.4499199/94‑1 (MQ=60)
CAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTG > SRR4302533.1797500/1‑94 (MQ=60)
CAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTG < SRR4302533.790044/94‑1 (MQ=60)
CAGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTG > SRR4302533.3600690/1‑94 (MQ=60)
AGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGC > SRR4302533.958982/1‑94 (MQ=60)
AGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGC > SRR4302533.5363944/1‑94 (MQ=60)
AGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGC > SRR4302533.974545/1‑94 (MQ=60)
AGCCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGC > SRR4302533.5221558/1‑94 (MQ=60)
CCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCA < SRR4302533.1024862/94‑1 (MQ=60)
CCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCA > SRR4302533.6040231/1‑94 (MQ=60)
CCAGCCAACCGCCCAGCTTCTTGATTTGCGCATTTCCCTTCCATCCAATAACCTGTCTGGCGCGTCCCGATCCAGACCCCGGCAGCTGCTGCCA < SRR4302533.3712077/94‑1 (MQ=60)
GCCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAA < SRR4302533.2931144/94‑1 (MQ=60)
CCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCTCGATCCAGTTCCCGGCAGCTGCTGCCAGAAC > SRR4302533.4026744/1‑94 (MQ=60)
CCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAAC < SRR4302533.1574689/94‑1 (MQ=60)
CCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAAC < SRR4302533.5069092/94‑1 (MQ=60)
CCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAAC < SRR4302533.2610812/94‑1 (MQ=60)
CCAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAAC > SRR4302533.4096040/1‑94 (MQ=60)
CAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT < SRR4302533.3803123/94‑1 (MQ=60)
CAACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGCCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACT < SRR4302533.4474853/94‑1 (MQ=60)
AACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGGGTCCCGATCCAGTCCCCGGCAGCTCCTGCCggacttc > SRR4302533.2020493/1‑87 (MQ=60)
AACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTG > SRR4302533.2020492/1‑94 (MQ=60)
AACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTG < SRR4302533.6188684/94‑1 (MQ=60)
AACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTG > SRR4302533.5078222/1‑94 (MQ=60)
ACCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGC < SRR4302533.1723609/94‑1 (MQ=60)
CCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCT > SRR4302533.3360756/1‑94 (MQ=60)
CCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCT < SRR4302533.6155544/94‑1 (MQ=60)
CCGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCT > SRR4302533.5938826/1‑94 (MQ=60)
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CGCTACGCCTTAAGCTGGGATTACCGGTCTTTTACTACAGCCACGAAGGACACTAAGGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAACCTGTCTGGCGCGTCCCGATCCAGTCCCCGGCAGCTGCTGCCAGAACTGCT > NC_000913/3817063‑3817248
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
