Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,837,057	G→A	L188L (CTC→CTT)	nlpA ←	lipoprotein‑28

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,837,057	0	G	A	99.7%	2229.7 / ‑5.0	608	L188L (CTC→CTT)	nlpA	lipoprotein‑28
Reads supporting (aligned to +/- strand): ref base G (1/1); new base A (270/335); total (272/336)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.23e-01

Only 100 of 629 total aligned reads displayed.

GCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGGAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTT  >  NC_000913/3836967‑3837146

gCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAg                                                                                          >  1:2765359/1‑93 (MQ=255)

 cTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑c                                                                                        >  2:1962593/1‑93 (MQ=255)

       tGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGcc                                                                                  >  2:447569/1‑93 (MQ=255)

       tGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGcc                                                                                  >  1:4627795/1‑93 (MQ=255)

        gCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGccc                                                                                 >  1:5576507/1‑93 (MQ=255)

          aCCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGccccc                                                                               <  1:8307475/93‑1 (MQ=255)

           ccGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCt                                                                              >  2:5796887/1‑93 (MQ=255)

           ccGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCt                                                                              <  1:8756052/93‑1 (MQ=255)

           ccGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGGGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCt                                                                              <  1:9688401/93‑1 (MQ=255)

              gagaAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGa                                                                           >  1:10034548/1‑93 (MQ=255)

              gagaAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGa                                                                           <  1:7021326/93‑1 (MQ=255)

               agaAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAg                                                                          <  2:777665/93‑1 (MQ=255)

                gaAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGt                                                                         >  2:4150856/1‑93 (MQ=255)

                gaAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGt                                                                         <  1:4442949/93‑1 (MQ=255)

                 aaaGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGtt                                                                        <  1:2896344/93‑1 (MQ=255)

                 aaaGCCCGGTCTGCTGAATGTAAGTGATGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGtt                                                                        <  2:1511736/93‑1 (MQ=255)

                  aaGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTc                                                                       <  1:9404991/93‑1 (MQ=255)

                   aGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTcc                                                                      <  2:7985517/93‑1 (MQ=255)

                       cGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATaa                                                                  <  1:3518109/93‑1 (MQ=255)

                        ggTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAAt                                                                 <  1:2337277/93‑1 (MQ=255)

                        ggTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAAt                                                                 >  1:5835911/1‑93 (MQ=255)

                         gTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATc                                                                >  2:3276839/1‑93 (MQ=255)

                         gTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATc                                                                <  1:2650896/93‑1 (MQ=255)

                          tCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCt                                                               >  1:486536/1‑93 (MQ=255)

                            tgctgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGc                                                             >  2:10046462/1‑93 (MQ=255)

                               tgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCaaa                                                          >  2:46470/1‑93 (MQ=255)

                               tgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCaaa                                                          <  2:299724/93‑1 (MQ=255)

                               tgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCaaa                                                          <  1:3452465/93‑1 (MQ=255)

                                gAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAAt                                                         <  1:7271947/93‑1 (MQ=255)

                                 aaTGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTGCGCGCGGAAG‑TTGCGCCCCCTCGAGTTCCATAATCTGCAAATg                                                        <  2:7483155/93‑1 (MQ=255)

                                 aaTGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGACCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATg                                                        <  2:9457082/93‑1 (MQ=255)

                                  aTGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGa                                                       <  2:645891/93‑1 (MQ=255)

                                  aTGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGa                                                       <  1:6312506/93‑1 (MQ=255)

                                   tGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGAc                                                      >  1:5313101/1‑93 (MQ=255)

                                   tGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGAc                                                      >  1:7910611/1‑93 (MQ=255)

                                    gTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACg                                                     >  1:3302938/1‑93 (MQ=255)

                                     tAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGa                                                    >  2:3952317/1‑93 (MQ=255)

                                     tAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGa                                                    >  1:9951886/1‑93 (MQ=255)

                                      aaGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAg                                                   <  1:2251800/93‑1 (MQ=255)

                                       aGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAgg                                                  >  1:164906/1‑93 (MQ=255)

                                        gtggtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGa                                                 >  1:7816860/1‑93 (MQ=255)

                                        gtggtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGa                                                 <  2:3363808/93‑1 (MQ=255)

                                         tggtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGAt                                                >  1:5363526/1‑93 (MQ=255)

                                         tggtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGAt                                                >  2:2338728/1‑93 (MQ=255)

                                           gtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTa                                              <  1:4331703/93‑1 (MQ=255)

                                            tgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTAt                                             <  2:1714961/93‑1 (MQ=255)

                                            tgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTAt                                             >  1:5193958/1‑93 (MQ=255)

                                            tgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTAt                                             <  2:6915154/93‑1 (MQ=255)

                                            tgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTAt                                             <  1:2108208/93‑1 (MQ=255)

                                             gCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATc                                            >  1:8998053/1‑93 (MQ=255)

                                              cTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCg                                           <  2:9588586/93‑1 (MQ=255)

                                              cTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCg                                           >  2:1339884/1‑93 (MQ=255)

                                               tGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑ATGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATAgg                                          >  1:6433726/1‑93 (MQ=255)

                                                gATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGt                                         >  2:7012299/1‑93 (MQ=255)

                                                gATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGt                                         >  2:5428573/1‑93 (MQ=255)

                                                 aTAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGtt                                        >  1:7615618/1‑93 (MQ=255)

                                                 aTAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGtt                                        <  2:8848321/93‑1 (MQ=255)

                                                  tactCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTta                                       <  1:6833821/90‑1 (MQ=255)

                                                  tAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTta                                       <  2:9071210/93‑1 (MQ=255)

                                                  tAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTta                                       <  2:2153212/93‑1 (MQ=255)

                                                   aaTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtat                                      <  2:2594904/93‑1 (MQ=255)

                                                    aTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtata                                     >  1:3917850/1‑93 (MQ=255)

                                                     tCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTatat                                    >  2:3838216/1‑93 (MQ=255)

                                                      cGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATc                                   <  2:6571084/93‑1 (MQ=255)

                                                      cGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATc                                   <  2:5064928/93‑1 (MQ=255)

                                                       gCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATcc                                  >  1:4094783/1‑93 (MQ=255)

                                                        cTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCa                                 >  2:8092121/1‑93 (MQ=255)

                                                        cTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCa                                 >  2:2471256/1‑93 (MQ=255)

                                                        cTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGACGATTATCGGTCATATTCa                                 >  2:3549721/1‑93 (MQ=255)

                                                          aCATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAgc                               >  2:6696767/1‑93 (MQ=255)

                                                          aCATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAgc                               <  2:8255904/93‑1 (MQ=255)

                                                          aCATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAgc                               <  1:5639713/93‑1 (MQ=255)

                                                            aTCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTACCGGTTATATCCAgcgc                             <  2:8472068/93‑1 (MQ=255)

                                                               aaCTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggt                          >  1:1962241/1‑93 (MQ=255)

                                                               aaCTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggt                          <  1:9568843/93‑1 (MQ=255)

                                                                aCTTTGGGATCATCCAGTACGCGCGGAAGCCTGC‑CCCCCGCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggta                         <  1:7984455/93‑1 (MQ=255)

                                                                aCTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggta                         >  2:7256704/1‑93 (MQ=255)

                                                                 cTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtag                        <  2:2803418/93‑1 (MQ=255)

                                                                   ttGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtaggt                      >  2:874140/1‑93 (MQ=255)

                                                                    tGGGATCATCCAGTACGCGTGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtaggta                     <  1:3105930/93‑1 (MQ=255)

                                                                    tGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtaggta                     <  1:60/93‑1 (MQ=255)

                                                                     gggATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGtaa                    <  1:1793412/93‑1 (MQ=255)

                                                                     gggATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGtaa                    >  2:4873705/1‑93 (MQ=255)

                                                                      ggATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGtaat                   <  1:6647927/93‑1 (MQ=255)

                                                                       gATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGtaata                  >  2:9278778/1‑93 (MQ=255)

                                                                        atcatcCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGtaataa                 <  1:3710932/93‑1 (MQ=255)

                                                                         tcatcCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAc                <  2:6269391/93‑1 (MQ=255)

                                                                         tcatcCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAc                >  1:2532567/1‑93 (MQ=255)

                                                                             ccAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCtt            <  1:1227153/93‑1 (MQ=255)

                                                                               aGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCtttt          <  1:8438112/93‑1 (MQ=255)

                                                                               aGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCtttt          <  1:6562207/93‑1 (MQ=255)

                                                                                 tACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTcc        >  2:6133590/1‑93 (MQ=255)

                                                                                 tACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTcc        >  2:8586842/1‑93 (MQ=255)

                                                                                 tACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTcc        >  1:8144454/1‑93 (MQ=255)

                                                                                 tACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTcc        >  1:6135831/1‑93 (MQ=255)

                                                                                  aCGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTccc       <  2:4553570/93‑1 (MQ=255)

                                                                                   cgcgcgGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCct      <  1:9107869/93‑1 (MQ=255)

                                                                                    gcgcgGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCctt     >  1:3035315/1‑92 (MQ=255)

                                                                                      gcgGGAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATAGCCAGCGCGGTAGGTAATAACCCTTTTCcttctt   >  1:1429926/1‑93 (MQ=255)

                                                                                      gcgGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCtt   >  1:7448298/1‑93 (MQ=255)

GCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGGAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTT  >  NC_000913/3836967‑3837146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 364 total aligned reads displayed.

ACGCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGGAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGA  >  NC_000913/3836965‑3837150

ACGCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAA                                                                                               >  SRR4302540.3919092/1‑94 (MQ=60)

ACGCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAA                                                                                               <  SRR4302540.9325872/94‑1 (MQ=60)

ACGCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAA                                                                                               >  SRR4302540.718964/1‑94 (MQ=60)

ACGCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAA                                                                                               <  SRR4302540.8795905/94‑1 (MQ=60)

 CGCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG                                                                                              >  SRR4302540.8521736/1‑94 (MQ=60)

   CTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CT                                                                                           >  SRR4302540.3617120/1‑94 (MQ=60)

   CTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CT                                                                                           <  SRR4302540.2156032/94‑1 (MQ=60)

   CTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CT                                                                                           >  SRR4302540.2230754/1‑94 (MQ=60)

   CTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CT                                                                                           >  SRR4302540.5336396/1‑94 (MQ=60)

   CTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CT                                                                                           <  SRR4302540.5798048/94‑1 (MQ=60)

    TGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGCAG‑CTG                                                                                          >  SRR4302540.2687786/1‑94 (MQ=60)

    TGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTG                                                                                          >  SRR4302540.9740356/1‑94 (MQ=60)

    TGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTG                                                                                          >  SRR4302540.5676605/1‑94 (MQ=60)

    TGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTG                                                                                          >  SRR4302540.4358523/1‑94 (MQ=60)

     GTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGC                                                                                         >  SRR4302540.5242232/1‑94 (MQ=60)

     GTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGC                                                                                         <  SRR4302540.5980626/94‑1 (MQ=60)

     GTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGC                                                                                         <  SRR4302540.7754584/94‑1 (MQ=60)

     GTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGC                                                                                         >  SRR4302540.8713988/1‑94 (MQ=60)

      TCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGGAG‑CTGCG                                                                                        <  SRR4302540.552857/94‑1 (MQ=60)

       CGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGC                                                                                       >  SRR4302540.3800514/1‑94 (MQ=60)

         TGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCC                                                                                     >  SRR4302540.10011495/1‑94 (MQ=60)

          GCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCC                                                                                    >  SRR4302540.7382051/1‑94 (MQ=60)

          GCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCC                                                                                    >  SRR4302540.2420691/1‑94 (MQ=60)

           CACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCC                                                                                   >  SRR4302540.2327991/1‑94 (MQ=60)

            ACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCT                                                                                  <  SRR4302540.8403929/94‑1 (MQ=60)

             CCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTC                                                                                 >  SRR4302540.3087565/1‑94 (MQ=60)

             CCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTC                                                                                 <  SRR4302540.1981510/94‑1 (MQ=60)

              CGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCG                                                                                <  SRR4302540.4589959/94‑1 (MQ=60)

               GGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGA                                                                               >  SRR4302540.4390644/1‑94 (MQ=60)

               GGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGA                                                                               >  SRR4302540.4834119/1‑94 (MQ=60)

                GAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAG                                                                              >  SRR4302540.6401329/1‑94 (MQ=60)

                 AGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGT                                                                             <  SRR4302540.8359297/94‑1 (MQ=60)

                  GAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTT                                                                            >  SRR4302540.4540098/1‑94 (MQ=60)

                  GAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTT                                                                            <  SRR4302540.4491100/94‑1 (MQ=60)

                   AAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTC                                                                           >  SRR4302540.1555622/1‑94 (MQ=60)

                   AAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTC                                                                           <  SRR4302540.4868031/94‑1 (MQ=60)

                   AAACCGCGGTCTTCTGAATCTAAGTGGTGCTGATAATCGATACATCGACTTTGGGATCATCCAGTACGCTCCGAAG‑CTGCGCCCCCTCGAGTTC                                                                           <  SRR4302540.2927925/94‑1 (MQ=60)

                    AAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCC                                                                          >  SRR4302540.6788987/1‑94 (MQ=60)

                    AAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCC                                                                          >  SRR4302540.7672341/1‑94 (MQ=60)

                    AAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCC                                                                          <  SRR4302540.9516853/94‑1 (MQ=60)

                     AGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCA                                                                         >  SRR4302540.6977563/1‑94 (MQ=60)

                     AGCCCGGTCTGCTGAATGTAAGTGGCGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCA                                                                         <  SRR4302540.7029278/94‑1 (MQ=60)

                       CCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATA                                                                       >  SRR4302540.3659743/1‑94 (MQ=60)

                       CCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATA                                                                       >  SRR4302540.5615554/1‑94 (MQ=60)

                       CCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATA                                                                       <  SRR4302540.901853/94‑1 (MQ=60)

                        CCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAA                                                                      >  SRR4302540.831944/1‑94 (MQ=60)

                        CCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAA                                                                      <  SRR4302540.2857820/94‑1 (MQ=60)

                        CCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAA                                                                      >  SRR4302540.920347/1‑94 (MQ=60)

                         CGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAAT                                                                     <  SRR4302540.3556439/94‑1 (MQ=60)

                         CGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAAT                                                                     >  SRR4302540.5900439/1‑94 (MQ=60)

                          GGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATC                                                                    >  SRR4302540.5711721/1‑94 (MQ=60)

                          GGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATC                                                                    <  SRR4302540.2362464/94‑1 (MQ=60)

                           GTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCT                                                                   <  SRR4302540.7907315/94‑1 (MQ=60)

                           GTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCT                                                                   >  SRR4302540.491743/1‑94 (MQ=60)

                           GTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCT                                                                   <  SRR4302540.7294385/94‑1 (MQ=60)

                           GTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCT                                                                   <  SRR4302540.7928803/94‑1 (MQ=60)

                           GTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCT                                                                   >  SRR4302540.692911/1‑94 (MQ=60)

                            TCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTG                                                                  <  SRR4302540.6134366/94‑1 (MQ=60)

                            TCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTG                                                                  >  SRR4302540.8225032/1‑94 (MQ=60)

                             CTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGC                                                                 >  SRR4302540.1457/1‑94 (MQ=60)

                             CTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGC                                                                 <  SRR4302540.6116219/94‑1 (MQ=60)

                             CTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGC                                                                 >  SRR4302540.7568626/1‑94 (MQ=60)

                             CTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGC                                                                 >  SRR4302540.8885933/1‑94 (MQ=60)

                             CTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGC                                                                 >  SRR4302540.6623399/1‑94 (MQ=60)

                              TGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCA                                                                >  SRR4302540.3459864/1‑94 (MQ=60)

                              CGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCA                                                                <  SRR4302540.231749/94‑1 (MQ=60)

                               GCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAA                                                               <  SRR4302540.255760/94‑1 (MQ=60)

                               GCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAA                                                               >  SRR4302540.9637705/1‑94 (MQ=60)

                                 TGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAAT                                                             <  SRR4302540.3490026/94‑1 (MQ=60)

                                 TGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAAT                                                             >  SRR4302540.2229664/1‑94 (MQ=60)

                                 TGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAAT                                                             <  SRR4302540.2853070/94‑1 (MQ=60)

                                  GAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATG                                                            <  SRR4302540.3432082/94‑1 (MQ=60)

                                  GAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATG                                                            <  SRR4302540.10158671/94‑1 (MQ=60)

                                  GAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATG                                                            >  SRR4302540.2695614/1‑94 (MQ=60)

                                  GAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATG                                                            >  SRR4302540.540684/1‑94 (MQ=60)

                                  GAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATG                                                            <  SRR4302540.5235879/94‑1 (MQ=60)

                                   AATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGA                                                           <  SRR4302540.6526451/94‑1 (MQ=60)

                                    ATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑GTGTGCCCACTCGAGTTCCATAATCTGCAAATGAC                                                          >  SRR4302540.3280492/1‑94 (MQ=60)

                                    ATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGAC                                                          <  SRR4302540.3519118/94‑1 (MQ=60)

                                    ATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGAC                                                          >  SRR4302540.5371271/1‑94 (MQ=60)

                                    ATGTAAGTGGGGCTGATAATCCCTACATCAACTTTGGGATCATCCGGGACGCGCGGAAG‑CTGCGCCCTCTCGAGTTCCATAAGCTGCAAATGAC                                                          <  SRR4302540.2935367/94‑1 (MQ=60)

                                     TGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACG                                                         <  SRR4302540.1837196/94‑1 (MQ=60)

                                     TGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACG                                                         <  SRR4302540.1283277/94‑1 (MQ=60)

                                      GTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGA                                                        >  SRR4302540.10068062/1‑94 (MQ=60)

                                      GTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGA                                                        <  SRR4302540.6869709/94‑1 (MQ=60)

                                       TAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAG                                                       >  SRR4302540.3318410/1‑94 (MQ=60)

                                        AAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGG                                                      <  SRR4302540.289527/94‑1 (MQ=60)

                                        AAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGG                                                      >  SRR4302540.166557/1‑94 (MQ=60)

                                        AAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGG                                                      >  SRR4302540.4286139/1‑94 (MQ=60)

                                        AAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGG                                                      <  SRR4302540.2275971/94‑1 (MQ=60)

                                         AGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGA                                                     >  SRR4302540.7908212/1‑94 (MQ=60)

                                          GTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGAT                                                    <  SRR4302540.6537823/94‑1 (MQ=60)

                                             GTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTAT                                                 <  SRR4302540.4378853/94‑1 (MQ=60)

                                             GTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTAT                                                 >  SRR4302540.5250519/1‑94 (MQ=60)

                                             GTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTAT                                                 <  SRR4302540.6314886/94‑1 (MQ=60)

                                              TGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATC                                                >  SRR4302540.9105998/1‑94 (MQ=60)

                                              TGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATC                                                <  SRR4302540.2130834/94‑1 (MQ=60)

                                               GCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCG                                               <  SRR4302540.8735519/94‑1 (MQ=60)

                                                CTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGG                                              >  SRR4302540.4465176/1‑94 (MQ=60)

                                                CTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGG                                              >  SRR4302540.7657784/1‑94 (MQ=60)

                                                CTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGG                                              >  SRR4302540.6187373/1‑94 (MQ=60)

                                                CTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGG                                              >  SRR4302540.7821800/1‑94 (MQ=60)

                                                CTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGG                                              >  SRR4302540.1609556/1‑94 (MQ=60)

                                                CTGATAATCCCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGG                                              <  SRR4302540.9763585/94‑1 (MQ=60)

                                                 TGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGT                                             >  SRR4302540.2949794/1‑94 (MQ=60)

                                                  GATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTT                                            >  SRR4302540.7701236/1‑94 (MQ=60)

                                                  GATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTT                                            <  SRR4302540.475600/94‑1 (MQ=60)

                                                  GATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTT                                            >  SRR4302540.10095840/1‑94 (MQ=60)

                                                   ATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTA                                           <  SRR4302540.5297702/94‑1 (MQ=60)

                                                   ATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTA                                           <  SRR4302540.3081679/94‑1 (MQ=60)

                                                   ATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTA                                           >  SRR4302540.2987580/1‑94 (MQ=60)

                                                     AATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATA                                         >  SRR4302540.3960267/1‑94 (MQ=60)

                                                      ATCGCTACATCAACTTTGGGATCATCCAGTGCGCGCGGAAG‑CAGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATAT                                        <  SRR4302540.6495805/94‑1 (MQ=60)

                                                      ATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATAT                                        <  SRR4302540.8150208/94‑1 (MQ=60)

                                                      ATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATAT                                        >  SRR4302540.1922995/1‑94 (MQ=60)

                                                       TCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATC                                       <  SRR4302540.5419201/94‑1 (MQ=60)

                                                       TCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATC                                       <  SRR4302540.410072/94‑1 (MQ=60)

                                                       TCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATC                                       <  SRR4302540.8899783/94‑1 (MQ=60)

                                                        CGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCC                                      >  SRR4302540.4138963/1‑94 (MQ=60)

                                                         GCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCA                                     <  SRR4302540.66305/94‑1 (MQ=60)

                                                         GCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCA                                     <  SRR4302540.1430010/94‑1 (MQ=60)

                                                         GCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCA                                     <  SRR4302540.1983913/94‑1 (MQ=60)

                                                          CTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAG                                    <  SRR4302540.9139675/94‑1 (MQ=60)

                                                          CTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAG                                    >  SRR4302540.4606998/1‑94 (MQ=60)

                                                          CTACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAG                                    <  SRR4302540.1754705/94‑1 (MQ=60)

                                                            ACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCG                                  <  SRR4302540.1991533/94‑1 (MQ=60)

                                                            ACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCG                                  <  SRR4302540.8024893/94‑1 (MQ=60)

                                                            ACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCG                                  <  SRR4302540.9220125/94‑1 (MQ=60)

                                                            ACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCG                                  <  SRR4302540.923974/94‑1 (MQ=60)

                                                            ACATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCG                                  <  SRR4302540.5400379/94‑1 (MQ=60)

                                                            ACATCAACTTGGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTGCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCG                                  <  SRR4302540.5649743/94‑1 (MQ=60)

                                                             CATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGC                                 >  SRR4302540.9931918/1‑94 (MQ=60)

                                                             CATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGC                                 <  SRR4302540.5700601/94‑1 (MQ=60)

                                                              ATCAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCG                                >  SRR4302540.1199975/1‑94 (MQ=60)

                                                                CAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGT                              <  SRR4302540.3499244/94‑1 (MQ=60)

                                                                CAACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGA                              >  SRR4302540.2418485/1‑94 (MQ=60)

                                                                  ACTTTGGGATCATCCAGTACGCGCGGAAGCCTGC‑CCCCCGCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAG                            <  SRR4302540.8077437/94‑1 (MQ=60)

                                                                  ACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAG                            <  SRR4302540.7958993/94‑1 (MQ=60)

                                                                  ACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAG                            <  SRR4302540.8077434/94‑1 (MQ=60)

                                                                  ACTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAG                            <  SRR4302540.4931622/94‑1 (MQ=60)

                                                                   CTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGG                           <  SRR4302540.8069325/94‑1 (MQ=60)

                                                                   CTTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGG                           <  SRR4302540.8000427/94‑1 (MQ=60)

                                                                    TTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGT                          <  SRR4302540.9798906/94‑1 (MQ=60)

                                                                    TTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGT                          <  SRR4302540.2605606/94‑1 (MQ=60)

                                                                    TTTGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGT                          <  SRR4302540.1684674/94‑1 (MQ=60)

                                                                      TGGGATCATCCAGTACGCGTGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAA                        <  SRR4302540.3139928/94‑1 (MQ=60)

                                                                      TGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAA                        <  SRR4302540.932773/94‑1 (MQ=60)

                                                                      TGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAA                        <  SRR4302540.61/94‑1 (MQ=60)

                                                                      TGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAA                        >  SRR4302540.301959/1‑94 (MQ=60)

                                                                      TGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAA                        >  SRR4302540.6771260/1‑94 (MQ=60)

                                                                      TGGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAA                        <  SRR4302540.6716593/94‑1 (MQ=60)

                                                                       GGGATCATCCAGTACGCGCGGCAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAAT                       <  SRR4302540.7246548/94‑1 (MQ=60)

                                                                       GGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAAT                       <  SRR4302540.360719/94‑1 (MQ=60)

                                                                       GGGATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAAT                       <  SRR4302540.6239511/94‑1 (MQ=60)

                                                                          ATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAC                    >  SRR4302540.3179592/1‑94 (MQ=60)

                                                                          ATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAC                    <  SRR4302540.3751429/94‑1 (MQ=60)

                                                                          ATCATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAC                    >  SRR4302540.2559889/1‑94 (MQ=60)

                                                                            CATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCC                  >  SRR4302540.7457330/1‑94 (MQ=60)

                                                                            CATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCC                  >  SRR4302540.6228495/1‑94 (MQ=60)

                                                                            CATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCC                  <  SRR4302540.4011357/94‑1 (MQ=60)

                                                                             ATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCT                 <  SRR4302540.37814/94‑1 (MQ=60)

                                                                             ATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCT                 >  SRR4302540.3092770/1‑94 (MQ=60)

                                                                             ATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCT                 >  SRR4302540.5617044/1‑94 (MQ=60)

                                                                             ATCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCT                 >  SRR4302540.575923/1‑94 (MQ=60)

                                                                              TCCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTGCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTT                <  SRR4302540.2685046/94‑1 (MQ=60)

                                                                               CCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTT               <  SRR4302540.10153455/94‑1 (MQ=60)

                                                                               CCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTT               <  SRR4302540.8459010/94‑1 (MQ=60)

                                                                               CCAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTT               >  SRR4302540.6057488/1‑94 (MQ=60)

                                                                                CAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGTATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTT              <  SRR4302540.546984/94‑1 (MQ=60)

                                                                                CAGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTT              <  SRR4302540.175560/94‑1 (MQ=60)

                                                                                 AGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTC             <  SRR4302540.9545504/94‑1 (MQ=60)

                                                                                 AGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTC             >  SRR4302540.6949657/1‑94 (MQ=60)

                                                                                 AGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTC             <  SRR4302540.8536071/94‑1 (MQ=60)

                                                                                 AGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTC             >  SRR4302540.7357774/1‑94 (MQ=60)

                                                                                 AGTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTC             <  SRR4302540.1348269/94‑1 (MQ=60)

                                                                                  GTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCC            >  SRR4302540.6204172/1‑94 (MQ=60)

                                                                                  GTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCC            >  SRR4302540.8238995/1‑94 (MQ=60)

                                                                                  GTACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCC            >  SRR4302540.8229162/1‑94 (MQ=60)

                                                                                   TACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATGATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCC           <  SRR4302540.9819459/94‑1 (MQ=60)

                                                                                   TACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCC           >  SRR4302540.2069439/1‑94 (MQ=60)

                                                                                    ACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCT          <  SRR4302540.7181722/94‑1 (MQ=60)

                                                                                    ACGCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCT          >  SRR4302540.664238/1‑94 (MQ=60)

                                                                                      GCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCT        <  SRR4302540.670654/94‑1 (MQ=60)

                                                                                      GCGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCT        <  SRR4302540.8482520/94‑1 (MQ=60)

                                                                                       CGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTT       <  SRR4302540.2586710/94‑1 (MQ=60)

                                                                                       CGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTT       <  SRR4302540.4735636/94‑1 (MQ=60)

                                                                                       CGCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTT       <  SRR4302540.2795058/94‑1 (MQ=60)

                                                                                        GCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTTCCTCTTT      <  SRR4302540.9578570/94‑1 (MQ=60)

                                                                                        GCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTT      >  SRR4302540.9165946/1‑94 (MQ=60)

                                                                                        GCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTT      <  SRR4302540.6461211/94‑1 (MQ=60)

                                                                                        GCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTT      <  SRR4302540.4319783/94‑1 (MQ=60)

                                                                                        GCGGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTT      <  SRR4302540.3355746/94‑1 (MQ=60)

                                                                                          GGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCttttttcg    >  SRR4302540.1055827/1‑86 (MQ=60)

                                                                                          GGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCA    <  SRR4302540.8643223/94‑1 (MQ=60)

                                                                                          GGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCA    >  SRR4302540.6587143/1‑94 (MQ=60)

                                                                                          GGAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCA    <  SRR4302540.10059770/94‑1 (MQ=60)

                                                                                          GGAAG‑CTGCGCCACCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAAAACCCCTTTTCCCTCTTTCA    <  SRR4302540.5134969/94‑1 (MQ=60)

                                                                                           GAAG‑CTGCTCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAG   <  SRR4302540.9735481/94‑1 (MQ=60)

                                                                                           GAAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAG   >  SRR4302540.1812830/1‑94 (MQ=60)

                                                                                           GAAG‑CTGCGCCCCCACGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAG   <  SRR4302540.2606641/94‑1 (MQ=60)

ACGCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGGAG‑CTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTTCAGA  >  NC_000913/3836965‑3837150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`