Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,860,862	T→C	A123A (GCA→GCG)	b4553 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,860,862	0	T	C	100.0%	1263.7 / NA	392	A123A (GCA→GCG)	b4553	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (211/181); total (211/181)

Only 100 of 409 total aligned reads displayed.

AGCGCCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCTGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACTCAC  >  NC_000913/3860773‑3860954

aGCGCCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGcc                                                                                           >  2:6662764/1‑93 (MQ=255)

 gcgcCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCa                                                                                          >  1:100663/1‑93 (MQ=255)

     cGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACcgc                                                                                      >  1:7702307/1‑93 (MQ=255)

     cGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACcgc                                                                                      >  1:6137647/1‑93 (MQ=255)

      gTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACcgcg                                                                                     >  2:1769787/1‑93 (MQ=255)

      gTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACcgcg                                                                                     <  1:3917530/93‑1 (MQ=255)

       tCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACcgcgc                                                                                    >  1:260663/1‑92 (MQ=255)

        cacaATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTCCCCGCCACCGCGTc                                                                                   <  1:8699622/93‑1 (MQ=255)

         acaATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTcc                                                                                  >  2:2295018/1‑93 (MQ=255)

               ccGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTg                                                                            <  1:4105045/93‑1 (MQ=255)

                cGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGa                                                                           >  2:4918510/1‑93 (MQ=255)

                cGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGa                                                                           <  1:2875770/93‑1 (MQ=255)

                cGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGa                                                                           <  2:6198495/93‑1 (MQ=255)

                 ggAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGaa                                                                          <  2:5961726/93‑1 (MQ=255)

                 ggAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGaa                                                                          >  2:6968719/1‑93 (MQ=255)

                  gAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGaaa                                                                         >  2:9706000/1‑93 (MQ=255)

                   aaaTGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAAt                                                                        >  1:244956/1‑93 (MQ=255)

                   aaaTGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAAt                                                                        <  2:2566425/93‑1 (MQ=255)

                      tGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGa                                                                     <  2:3307866/93‑1 (MQ=255)

                      tGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGa                                                                     >  2:9483890/1‑93 (MQ=255)

                      tGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGa                                                                     <  1:5361338/93‑1 (MQ=255)

                      tGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGa                                                                     <  2:7890323/93‑1 (MQ=255)

                      tGATAATCGCGCGGATAGTGCTGGTATCGAGTGTTTTAGTCCCGACAATCATTGTCAGTCCGCTACCCGCCACCTCGTCCTGAGTGAAATCGa                                                                     <  2:6369055/93‑1 (MQ=255)

                       taTAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGAc                                                                    <  1:5559211/92‑1 (MQ=255)

                        aTAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACg                                                                   >  1:9396806/1‑93 (MQ=255)

                        aTAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACg                                                                   >  2:4438975/1‑93 (MQ=255)

                         tAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGc                                                                  <  1:3227678/93‑1 (MQ=255)

                           aTTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGCGTGAAATCGACGCCg                                                                >  1:3326/1‑93 (MQ=255)

                            ttGCGCCGATAATGCTGGTATCGAGGGGTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCACGTCCTGAGTGAAATTCACGCCGa                                                               >  1:6403663/1‑93 (MQ=255)

                              gcgcCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAg                                                             >  2:3906589/1‑93 (MQ=255)

                              gcgcCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAg                                                             <  1:1920584/93‑1 (MQ=255)

                                gcCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTa                                                           >  1:9548991/1‑93 (MQ=255)

                                gcCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTa                                                           <  1:2318172/93‑1 (MQ=255)

                                gcCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTa                                                           >  2:2006551/1‑93 (MQ=255)

                                 ccGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAg                                                          >  2:7353196/1‑93 (MQ=255)

                                   gATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCt                                                        <  1:3539980/93‑1 (MQ=255)

                                    aTAATGCTGGTATCGAGGGATTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAACTAGCtt                                                       >  1:2757383/1‑93 (MQ=255)

                                     tAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTc                                                      >  1:2097008/1‑93 (MQ=255)

                                     tAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTc                                                      >  2:2967266/1‑93 (MQ=255)

                                     tAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTc                                                      >  1:7407329/1‑93 (MQ=255)

                                      aaTGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTcc                                                     >  1:4193981/1‑93 (MQ=255)

                                       aTGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTccc                                                    <  2:6855652/93‑1 (MQ=255)

                                        agCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTcccc                                                   <  1:3039253/92‑1 (MQ=255)

                                         gCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCa                                                  <  1:1309163/93‑1 (MQ=255)

                                          cTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAg                                                 <  1:51548/93‑1 (MQ=255)

                                          cTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAg                                                 >  2:3406383/1‑93 (MQ=255)

                                          cTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAg                                                 <  2:857645/93‑1 (MQ=255)

                                          cTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAg                                                 <  2:8705606/93‑1 (MQ=255)

                                            ggTATCGATGGTTTTAAGCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGt                                               <  2:1336611/93‑1 (MQ=255)

                                              tATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCa                                             <  2:3644863/93‑1 (MQ=255)

                                              tATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCa                                             <  2:1025586/93‑1 (MQ=255)

                                              tATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCa                                             <  2:1287986/93‑1 (MQ=255)

                                               aTCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTCCGCCAGGTAAt                                            >  1:8523324/1‑93 (MQ=255)

                                                tCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCAtt                                           >  2:2878302/1‑93 (MQ=255)

                                                tCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCAtt                                           >  1:5003288/1‑93 (MQ=255)

                                                tCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCAtt                                           >  1:460823/1‑93 (MQ=255)

                                                tCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCAtt                                           >  1:3093851/1‑93 (MQ=255)

                                                 cGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTc                                          >  2:4813661/1‑93 (MQ=255)

                                                 cGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTc                                          >  1:4791012/1‑93 (MQ=255)

                                                  gAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTcc                                         >  2:4130903/1‑93 (MQ=255)

                                                  gAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTcc                                         >  2:7034023/1‑93 (MQ=255)

                                                  gAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTcc                                         >  2:9009486/1‑93 (MQ=255)

                                                  gAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTcc                                         >  1:1083779/1‑93 (MQ=255)

                                                  gAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTcc                                         <  2:1860033/93‑1 (MQ=255)

                                                  gAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTcc                                         >  1:7247028/1‑93 (MQ=255)

                                                   aGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTccc                                        >  2:8461350/1‑93 (MQ=255)

                                                    gggTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCa                                       >  1:6988878/1‑93 (MQ=255)

                                                    gggTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCa                                       <  1:9091725/93‑1 (MQ=255)

                                                     ggTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCAt                                      >  2:5477798/1‑93 (MQ=255)

                                                      gTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATc                                     <  1:165367/93‑1 (MQ=255)

                                                        tttAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATcgc                                   <  1:6493778/93‑1 (MQ=255)

                                                          tAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGt                                 >  2:2739494/1‑93 (MQ=255)

                                                           aaTCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGtt                                <  1:4268316/93‑1 (MQ=255)

                                                             tCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTtga                              >  1:7938188/1‑93 (MQ=255)

                                                               ccGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTtgatg                            >  1:5954367/1‑93 (MQ=255)

                                                                 ggCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGaa                          >  1:4898853/1‑93 (MQ=255)

                                                                  gCCATCATTGTCGGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTCCCCCAGGTCATTCCCATCGCGTTGATGaaa                         <  2:5767376/93‑1 (MQ=255)

                                                                  gCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGaaa                         <  1:1533681/93‑1 (MQ=255)

                                                                  gCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGaaa                         <  1:9831162/93‑1 (MQ=255)

                                                                   ccATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAAt                        <  1:7513499/93‑1 (MQ=255)

                                                                   ccATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAAt                        <  2:372343/93‑1 (MQ=255)

                                                                    catcatTGTCAGACCGCTGCCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATa                       <  2:8045102/93‑1 (MQ=255)

                                                                     atcatTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATat                      >  2:7594062/1‑92 (MQ=255)

                                                                     atcatTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAg                      <  1:4421242/93‑1 (MQ=255)

                                                                       catTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGtt                    <  2:5303649/93‑1 (MQ=255)

                                                                       catTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCACATCGCGTTGATGAAATAGtt                    <  1:6903214/93‑1 (MQ=255)

                                                                        atTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTc                   >  2:5137536/1‑93 (MQ=255)

                                                                         ttGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTAATAAAATCGTTcc                  >  1:7151202/1‑93 (MQ=255)

                                                                          tGTCAGACCGCTACCCGCCACCGGGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCa                 <  2:5561227/93‑1 (MQ=255)

                                                                          tGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCa                 <  1:9961798/93‑1 (MQ=255)

                                                                          tGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCa                 <  1:5684833/93‑1 (MQ=255)

                                                                              aGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTc             <  2:9568823/93‑1 (MQ=255)

                                                                               gACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCa            <  1:9764861/93‑1 (MQ=255)

                                                                                aCCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAg           <  1:9311604/93‑1 (MQ=255)

                                                                                   gCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGaa        >  1:1194279/1‑93 (MQ=255)

                                                                                   gCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGaa        >  2:2161116/1‑93 (MQ=255)

                                                                                     tACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAAc      >  2:1588965/1‑93 (MQ=255)

                                                                                      aCCCGCCACCGCTTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACt     <  2:361214/93‑1 (MQ=255)

                                                                                      aCCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACt     >  2:5906639/1‑93 (MQ=255)

                                                                                         tGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACTCAc  <  2:9271604/93‑1 (MQ=255)

AGCGCCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCTGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACTCAC  >  NC_000913/3860773‑3860954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 226 total aligned reads displayed.

ATGCAGCGCCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCTGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACTCACC  >  NC_000913/3860769‑3860955

ATGCAGCGCCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCC                                                                                               >  SRR4302540.8960187/1‑94 (MQ=60)

ATGCAGCGCCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCC                                                                                               <  SRR4302540.6167849/94‑1 (MQ=60)

 TGCAGCGCCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCG                                                                                              <  SRR4302540.1020295/94‑1 (MQ=60)

    AGCGCCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCA                                                                                           >  SRR4302540.101733/1‑94 (MQ=60)

       GCCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCG                                                                                        >  SRR4302540.5660437/1‑94 (MQ=60)

       GCCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCC                                                                                        >  SRR4302540.7459610/1‑94 (MQ=60)

        CCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGC                                                                                       >  SRR4302540.7499736/1‑94 (MQ=60)

        CCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGC                                                                                       >  SRR4302540.6206004/1‑94 (MQ=60)

         CGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCG                                                                                      >  SRR4302540.5899506/1‑94 (MQ=60)

         CGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCG                                                                                      >  SRR4302540.6333393/1‑94 (MQ=60)

          GTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGT                                                                                     <  SRR4302540.3959944/94‑1 (MQ=60)

          GTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGT                                                                                     <  SRR4302540.8661914/94‑1 (MQ=60)

          GTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGC                                                                                     >  SRR4302540.263205/1‑94 (MQ=60)

           TCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTC                                                                                    >  SRR4302540.7556025/1‑94 (MQ=60)

            CACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTCCCCGCCACCGCGTCC                                                                                   <  SRR4302540.8800609/94‑1 (MQ=60)

            CACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCC                                                                                   >  SRR4302540.4267596/1‑94 (MQ=60)

            CACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCC                                                                                   >  SRR4302540.10034932/1‑94 (MQ=60)

            CACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCC                                                                                   <  SRR4302540.8800617/94‑1 (MQ=60)

            CACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCC                                                                                   >  SRR4302540.2859933/1‑94 (MQ=60)

            CACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCC                                                                                   >  SRR4302540.6531262/1‑94 (MQ=60)

            CACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCC                                                                                   >  SRR4302540.4267595/1‑94 (MQ=60)

             ACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCT                                                                                  >  SRR4302540.5739756/1‑94 (MQ=60)

             ACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCT                                                                                  <  SRR4302540.7070354/94‑1 (MQ=60)

             ACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCT                                                                                  >  SRR4302540.418470/1‑94 (MQ=60)

              CAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTG                                                                                 >  SRR4302540.2360406/1‑94 (MQ=60)

              CAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTG                                                                                 <  SRR4302540.1103238/94‑1 (MQ=60)

              CAAAGCCGCAAATGATAAGTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTG                                                                                 <  SRR4302540.4663273/94‑1 (MQ=60)

               AATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGA                                                                                >  SRR4302540.2984103/1‑94 (MQ=60)

                   CCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGA                                                                            <  SRR4302540.4149330/94‑1 (MQ=60)

                    CGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAA                                                                           <  SRR4302540.2907038/94‑1 (MQ=60)

                    CGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAA                                                                           >  SRR4302540.6091339/1‑94 (MQ=60)

                     GGAAATGCTAATGGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCCTTGTCAGACCACTACCCGCCCCCGCGTCCTGAGcgaat                                                                          >  SRR4302540.4483584/1‑89 (MQ=60)

                     GGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAA                                                                          <  SRR4302540.4759220/94‑1 (MQ=60)

                     GGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAA                                                                          >  SRR4302540.10024892/1‑94 (MQ=60)

                      GAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAAT                                                                         >  SRR4302540.247323/1‑94 (MQ=60)

                        AATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCG                                                                       <  SRR4302540.3639430/94‑1 (MQ=60)

                         ATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGA                                                                      <  SRR4302540.7929684/94‑1 (MQ=60)

                          TGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGAC                                                                     >  SRR4302540.4177179/1‑94 (MQ=60)

                          TGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGAC                                                                     >  SRR4302540.6517016/1‑94 (MQ=60)

                          TGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGAC                                                                     <  SRR4302540.1981735/94‑1 (MQ=60)

                          TGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGAC                                                                     >  SRR4302540.1396145/1‑94 (MQ=60)

                          TGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGAC                                                                     <  SRR4302540.5420225/94‑1 (MQ=60)

                          TGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGAC                                                                     <  SRR4302540.726711/94‑1 (MQ=60)

                          TGATAATTGCGCCGATAATGCGGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCTACCGCGTCCTGAGTGAAATCGAC                                                                     <  SRR4302540.7126464/94‑1 (MQ=60)

                           GATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACG                                                                    >  SRR4302540.9508616/1‑94 (MQ=60)

                           GATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACG                                                                    <  SRR4302540.3352613/94‑1 (MQ=60)

                           GATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACG                                                                    >  SRR4302540.6013198/1‑94 (MQ=60)

                            ATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGC                                                                   >  SRR4302540.5058556/1‑94 (MQ=60)

                            ATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGC                                                                   >  SRR4302540.1547526/1‑94 (MQ=60)

                             TAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCC                                                                  <  SRR4302540.3262772/94‑1 (MQ=60)

                             TAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCC                                                                  <  SRR4302540.3262773/94‑1 (MQ=60)

                              AATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGCGTGAAATCGACGCCG                                                                 >  SRR4302540.3361/1‑94 (MQ=60)

                              AATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCG                                                                 <  SRR4302540.4027123/94‑1 (MQ=60)

                              AATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCG                                                                 <  SRR4302540.7548055/94‑1 (MQ=60)

                              AATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTACTGAGTGAAATCGACGCCG                                                                 >  SRR4302540.9897164/1‑94 (MQ=60)

                               ATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGA                                                                >  SRR4302540.5595036/1‑94 (MQ=60)

                               ATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGA                                                                <  SRR4302540.2326910/94‑1 (MQ=60)

                               ATTGCGCCGATAATGCTGGTATCGAGGGGTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCACGTCCTGAGTGAAATTCACGCCGA                                                                >  SRR4302540.6474942/1‑94 (MQ=60)

                                 TGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAG                                                              >  SRR4302540.852940/1‑94 (MQ=60)

                                  GCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGT                                                             <  SRR4302540.1941535/94‑1 (MQ=60)

                                  GCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGT                                                             <  SRR4302540.2495421/94‑1 (MQ=60)

                                   CGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTA                                                            >  SRR4302540.9661951/1‑94 (MQ=60)

                                    GCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAG                                                           <  SRR4302540.2343130/94‑1 (MQ=60)

                                     CCTATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGC                                                          >  SRR4302540.4148882/1‑94 (MQ=60)

                                     CCGATAATCCTTGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGCCCGCTACCCGCCCCCGCGTCCTGAGTGAAATCGACGCCGAAGTAGC                                                          <  SRR4302540.1097519/94‑1 (MQ=60)

                                     CCGAGAATTCTGGTAACGAGGGTGTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGC                                                          <  SRR4302540.8736382/94‑1 (MQ=60)

                                      CGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCT                                                         <  SRR4302540.3070229/94‑1 (MQ=60)

                                      CGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCT                                                         >  SRR4302540.5343487/1‑94 (MQ=60)

                                      CGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCT                                                         >  SRR4302540.2078170/1‑94 (MQ=60)

                                      CGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCT                                                         >  SRR4302540.7285812/1‑94 (MQ=60)

                                      CGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCT                                                         >  SRR4302540.215355/1‑94 (MQ=60)

                                       GATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTT                                                        <  SRR4302540.3578642/94‑1 (MQ=60)

                                       GATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTT                                                        >  SRR4302540.2844465/1‑94 (MQ=60)

                                       GATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTT                                                        <  SRR4302540.9626749/94‑1 (MQ=60)

                                       GATAATGCTGGTATCGAGGGATTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAACTAGCTT                                                        >  SRR4302540.2787178/1‑94 (MQ=60)

                                        ATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTC                                                       >  SRR4302540.2119522/1‑94 (MQ=60)

                                         TAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCC                                                      >  SRR4302540.4239606/1‑94 (MQ=60)

                                          AATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCC                                                     <  SRR4302540.5064950/94‑1 (MQ=60)

                                          AATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCC                                                     >  SRR4302540.9584435/1‑94 (MQ=60)

                                          AATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCC                                                     >  SRR4302540.7702556/1‑94 (MQ=60)

                                            TGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCA                                                   <  SRR4302540.1081543/94‑1 (MQ=60)

                                            AGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCA                                                   <  SRR4302540.3072604/94‑1 (MQ=60)

                                             TCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAG                                                  <  SRR4302540.1322758/94‑1 (MQ=60)

                                             GCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAG                                                  <  SRR4302540.1322759/94‑1 (MQ=60)

                                             GCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAG                                                  <  SRR4302540.5431434/94‑1 (MQ=60)

                                             GCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAG                                                  <  SRR4302540.2861217/94‑1 (MQ=60)

                                             GCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAG                                                  <  SRR4302540.4847100/94‑1 (MQ=60)

                                             GCTGGGATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCGGCCACCGCGTCCTGAGTGCAATCGACGCCGAAGCGGCTTCCCCAG                                                  >  SRR4302540.8061391/1‑94 (MQ=60)

                                              CTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGG                                                 <  SRR4302540.52066/94‑1 (MQ=60)

                                              CTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGG                                                 >  SRR4302540.2223079/1‑94 (MQ=60)

                                               TGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGT                                                <  SRR4302540.1663818/94‑1 (MQ=60)

                                                GGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTC                                               <  SRR4302540.5821904/94‑1 (MQ=60)

                                                GGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTC                                               >  SRR4302540.3401010/1‑94 (MQ=60)

                                                GGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTC                                               <  SRR4302540.3694728/94‑1 (MQ=60)

                                                 GTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCA                                              >  SRR4302540.6079602/1‑94 (MQ=60)

                                                 GTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCA                                              <  SRR4302540.6999885/94‑1 (MQ=60)

                                                 GTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCA                                              <  SRR4302540.3673363/94‑1 (MQ=60)

                                                  TATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCAT                                             >  SRR4302540.8622368/1‑94 (MQ=60)

                                                  TATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTCCGCCAGGTAAT                                             >  SRR4302540.8622367/1‑94 (MQ=60)

                                                  GATCGAGGTTTTTAATCCCGGCTATCATGGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCAT                                             <  SRR4302540.4556247/94‑1 (MQ=60)

                                                   ATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATT                                            >  SRR4302540.465736/1‑94 (MQ=60)

                                                   ATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATT                                            >  SRR4302540.3127773/1‑94 (MQ=60)

                                                   ATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATT                                            >  SRR4302540.5057470/1‑94 (MQ=60)

                                                   ATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATC                                            >  SRR4302540.3127772/1‑94 (MQ=60)

                                                    TCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTC                                           >  SRR4302540.4842255/1‑94 (MQ=60)

                                                    TCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTC                                           >  SRR4302540.3335816/1‑94 (MQ=60)

                                                     CGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCC                                          >  SRR4302540.4419572/1‑94 (MQ=60)

                                                     CGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCC                                          >  SRR4302540.1552059/1‑94 (MQ=60)

                                                     CGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCC                                          >  SRR4302540.1094893/1‑94 (MQ=60)

                                                     CGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCC                                          >  SRR4302540.1874207/1‑94 (MQ=60)

                                                     CGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCC                                          >  SRR4302540.7327880/1‑94 (MQ=60)

                                                     CGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCC                                          <  SRR4302540.6998104/94‑1 (MQ=60)

                                                     CGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCCTCCCCAGGTCATTCC                                          >  SRR4302540.6490304/1‑94 (MQ=60)

                                                      GAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCC                                         <  SRR4302540.3092071/94‑1 (MQ=60)

                                                      GAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCC                                         >  SRR4302540.2702411/1‑94 (MQ=60)

                                                       AGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCA                                        >  SRR4302540.1023472/1‑94 (MQ=60)

                                                       AGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCA                                        >  SRR4302540.7066464/1‑94 (MQ=60)

                                                        GGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCAT                                       <  SRR4302540.1889185/94‑1 (MQ=60)

                                                        GGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCAT                                       <  SRR4302540.5467778/94‑1 (MQ=60)

                                                        GGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCAT                                       <  SRR4302540.9200953/94‑1 (MQ=60)

                                                        GGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCAT                                       <  SRR4302540.8870538/94‑1 (MQ=60)

                                                         GGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATC                                      <  SRR4302540.7469172/94‑1 (MQ=60)

                                                         GGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATC                                      <  SRR4302540.6578625/94‑1 (MQ=60)

                                                         GGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATC                                      >  SRR4302540.7028478/1‑94 (MQ=60)

                                                         GGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATC                                      >  SRR4302540.2699830/1‑94 (MQ=60)

                                                         GGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATC                                      >  SRR4302540.4615932/1‑94 (MQ=60)

                                                         GGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATC                                      <  SRR4302540.5012075/94‑1 (MQ=60)

                                                         GGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATC                                      <  SRR4302540.5012073/94‑1 (MQ=60)

                                                         GGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGGCATTCCAATC                                      >  SRR4302540.6663468/1‑94 (MQ=60)

                                                          GTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCTGAAGTAGCTTCCCCAGGTCATTCCCATCG                                     >  SRR4302540.9245703/1‑94 (MQ=60)

                                                          GTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCG                                     >  SRR4302540.9190159/1‑94 (MQ=60)

                                                          GTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCG                                     >  SRR4302540.7426678/1‑94 (MQ=60)

                                                          GTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCG                                     <  SRR4302540.167023/94‑1 (MQ=60)

                                                          GTTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCG                                     <  SRR4302540.10088683/94‑1 (MQ=60)

                                                           TTTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGC                                    <  SRR4302540.1197731/94‑1 (MQ=60)

                                                            TTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCG                                   >  SRR4302540.8226416/1‑94 (MQ=60)

                                                            TTTAATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCG                                   <  SRR4302540.6565993/94‑1 (MQ=60)

                                                              TAATCCCGACCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAAGCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTT                                 <  SRR4302540.456326/94‑1 (MQ=60)

                                                               AATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTG                                <  SRR4302540.6548648/94‑1 (MQ=60)

                                                               AATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTG                                <  SRR4302540.4314738/94‑1 (MQ=60)

                                                               AATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTG                                >  SRR4302540.6199978/1‑94 (MQ=60)

                                                                ATCCCGGCTGTCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGA                               <  SRR4302540.4923525/94‑1 (MQ=60)

                                                                ATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGA                               >  SRR4302540.949504/1‑94 (MQ=60)

                                                                ATCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGA                               >  SRR4302540.8030702/1‑94 (MQ=60)

                                                                 TCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGAT                              >  SRR4302540.533880/1‑94 (MQ=60)

                                                                 TCCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGCTGAT                              >  SRR4302540.2481316/1‑94 (MQ=60)

                                                                  CCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATG                             <  SRR4302540.7770647/94‑1 (MQ=60)

                                                                  CCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATG                             >  SRR4302540.6020221/1‑94 (MQ=60)

                                                                  CCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATG                             >  SRR4302540.9473938/1‑94 (MQ=60)

                                                                  CCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATG                             <  SRR4302540.7246525/94‑1 (MQ=60)

                                                                  CCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATG                             <  SRR4302540.4237546/94‑1 (MQ=60)

                                                                  CCCGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATG                             >  SRR4302540.3233522/1‑94 (MQ=60)

                                                                    CGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAA                           >  SRR4302540.4951548/1‑94 (MQ=60)

                                                                    CGGCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAA                           <  SRR4302540.2800916/94‑1 (MQ=60)

                                                                      GCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAAT                         <  SRR4302540.1550655/94‑1 (MQ=60)

                                                                      GCCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAAT                         <  SRR4302540.9946140/94‑1 (MQ=60)

                                                                       CCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGTAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATA                        <  SRR4302540.3518053/94‑1 (MQ=60)

                                                                       CCATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATA                        <  SRR4302540.7597499/94‑1 (MQ=60)

                                                                        CATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAG                       <  SRR4302540.5003366/94‑1 (MQ=60)

                                                                        CATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAG                       <  SRR4302540.328611/94‑1 (MQ=60)

                                                                        CATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAG                       <  SRR4302540.1373974/94‑1 (MQ=60)

                                                                         ATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGT                      >  SRR4302540.622202/1‑94 (MQ=60)

                                                                         ATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGT                      >  SRR4302540.7842415/1‑94 (MQ=60)

                                                                         ATCATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGT                      <  SRR4302540.4469148/94‑1 (MQ=60)

                                                                           CATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTC                    >  SRR4302540.4334914/1‑94 (MQ=60)

                                                                           CATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTC                    <  SRR4302540.4362183/94‑1 (MQ=60)

                                                                           CATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCACATCGCGTTGATGAAATAGTTC                    <  SRR4302540.6979956/94‑1 (MQ=60)

                                                                            ATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCC                   <  SRR4302540.5272401/94‑1 (MQ=60)

                                                                            ATTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTAATTCCCATCGCGTTGATGAAATAGTTCC                   >  SRR4302540.3114484/1‑94 (MQ=60)

                                                                             TTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCA                  <  SRR4302540.2439313/94‑1 (MQ=60)

                                                                             TTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCA                  >  SRR4302540.9445741/1‑94 (MQ=60)

                                                                             TTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCA                  <  SRR4302540.9407084/94‑1 (MQ=60)

                                                                             TTGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCA                  <  SRR4302540.7882369/94‑1 (MQ=60)

                                                                              TGTCAGACTGATACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAG                 <  SRR4302540.5747419/94‑1 (MQ=60)

                                                                              TGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAG                 <  SRR4302540.5747421/94‑1 (MQ=60)

                                                                              TGTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAG                 <  SRR4302540.10078037/94‑1 (MQ=60)

                                                                               GTCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGG                <  SRR4302540.25545/94‑1 (MQ=60)

                                                                                TCAGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGT               <  SRR4302540.9815445/94‑1 (MQ=60)

                                                                                  AGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCA             <  SRR4302540.1934186/94‑1 (MQ=60)

                                                                                  AGACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGATCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCA             >  SRR4302540.10080264/1‑94 (MQ=60)

                                                                                   GACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAG            <  SRR4302540.9879378/94‑1 (MQ=60)

                                                                                   GACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAG            >  SRR4302540.976168/1‑94 (MQ=60)

                                                                                    ACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGG           >  SRR4302540.9917274/1‑94 (MQ=60)

                                                                                    ACCGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGG           >  SRR4302540.4772389/1‑94 (MQ=60)

                                                                                      CGCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAA         >  SRR4302540.1206582/1‑94 (MQ=60)

                                                                                       GCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAA        <  SRR4302540.1204418/94‑1 (MQ=60)

                                                                                       GCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAA        <  SRR4302540.9918708/94‑1 (MQ=60)

                                                                                       GCTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAA        <  SRR4302540.7098036/94‑1 (MQ=60)

                                                                                        CTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAAC       >  SRR4302540.9220880/1‑94 (MQ=60)

                                                                                        CTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAAC       >  SRR4302540.7755882/1‑94 (MQ=60)

                                                                                        CTACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATGCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAAC       <  SRR4302540.1244089/94‑1 (MQ=60)

                                                                                         TACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACT      <  SRR4302540.9579188/94‑1 (MQ=60)

                                                                                          ACCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACTC     >  SRR4302540.7864413/1‑94 (MQ=60)

                                                                                           CCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACTCA    >  SRR4302540.9267343/1‑94 (MQ=60)

                                                                                           CCCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACTCA    <  SRR4302540.1464614/94‑1 (MQ=60)

                                                                                            CCGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACTCAC   <  SRR4302540.2292096/94‑1 (MQ=60)

                                                                                             CGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACTCACC  <  SRR4302540.918032/94‑1 (MQ=60)

                                                                                             CGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACTCACC  >  SRR4302540.7701293/1‑94 (MQ=60)

                                                                                             CGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATAAAATAGTTCCAGGTCAGGAAACTCACC  >  SRR4302540.3343653/1‑94 (MQ=60)

                                                                                             CGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGGAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACTCACC  <  SRR4302540.3063457/94‑1 (MQ=60)

ATGCAGCGCCGTCACAATGCCGGAAATGATAATTGCGCCGATAATGCTGGTATCGAGGGTTTTAATCCCGGCCATCATTGTCAGACCGCTACCTGCCACCGCGTCCTGAGTGAAATCGACGCCGAAGTAGCTTCCCCAGGTCATTCCCATCGCGTTGATGAAATAGTTCCAGGTCAGGAAACTCACC  >  NC_000913/3860769‑3860955

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`