Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,869,012 T→C I116V (ATT→GTT)  b3691 ← D‑galactonate transport

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,869,0120TC99.8% 1334.9 / ‑5.6 417I116V (ATT→GTT) b3691D‑galactonate transport
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (215/201);  total (215/202)
Fisher's exact test for biased strand distribution p-value = 4.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 434 total aligned reads displayed.

TATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAATACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAA  >  NC_000913/3868922‑3869101
                                                                                          |                                                                                         
tataAAAACCAACGTCAGGAGCGGGTTCATGTTCCGGGAACCAGCTGTTCACCATACGCTTATTGGTCGGCACAGCAGGCGCTT‑GAAAAtcac                                                                                        <  2:1226744/93‑4 (MQ=255)
  taAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCg                                                                                       >  1:5335571/1‑93 (MQ=255)
    aaaaCCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGt                                                                                     <  1:6885264/93‑1 (MQ=255)
     aaaCCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGtt                                                                                    >  1:2099914/1‑93 (MQ=255)
      aaCCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTa                                                                                   >  2:5909394/1‑93 (MQ=255)
       aCCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTAt                                                                                  <  2:4041767/93‑1 (MQ=255)
       aCCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTAt                                                                                  >  1:9971015/1‑93 (MQ=255)
         cAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATcg                                                                                <  1:3842873/93‑1 (MQ=255)
           aCGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATcgcg                                                                              <  1:6191464/93‑1 (MQ=255)
              gCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCgcgcgc                                                                           >  1:3176321/1‑93 (MQ=255)
              gCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCgcgcgc                                                                           <  2:2456940/93‑1 (MQ=255)
              gCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCgcgcgc                                                                           >  1:4403531/1‑93 (MQ=255)
              gCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGGCACCATCCGGTTATTGGTCGGGAGAGAAGGCGCTTCGACAACACCGGTTATCgagcgc                                                                           >  1:958221/1‑93 (MQ=255)
               cAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCa                                                                          >  1:890225/1‑93 (MQ=255)
               cAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCa                                                                          <  1:8580615/93‑1 (MQ=255)
               cAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCa                                                                          <  1:7530258/93‑1 (MQ=255)
               cAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCa                                                                          <  2:8508736/93‑1 (MQ=255)
               cAGAAGCGCGTTCATGTGCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCa                                                                          <  2:1343944/93‑1 (MQ=255)
                aGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAg                                                                         >  1:9187911/1‑93 (MQ=255)
                    gcgcGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCa                                                                     >  1:2062012/1‑93 (MQ=255)
                    gcgcGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCa                                                                     <  2:4709116/93‑1 (MQ=255)
                      gcgTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAAt                                                                   <  1:4908010/93‑1 (MQ=255)
                      gcgGTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAAt                                                                   <  2:3278665/93‑1 (MQ=255)
                        gTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTa                                                                 >  1:5232852/1‑93 (MQ=255)
                         ttCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTaa                                                                >  2:961489/1‑93 (MQ=255)
                         ttCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTaa                                                                >  1:3692785/1‑93 (MQ=255)
                         ttCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTaa                                                                <  1:5641834/93‑1 (MQ=255)
                         ttCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTaa                                                                >  2:2663961/1‑93 (MQ=255)
                         ttCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTaa                                                                >  2:169854/1‑93 (MQ=255)
                         ttCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTaa                                                                >  1:10031350/1‑93 (MQ=255)
                           cATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATg                                                              >  2:7163616/1‑93 (MQ=255)
                            aTGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGa                                                             >  1:25550/1‑93 (MQ=255)
                            aTGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGa                                                             >  1:3534838/1‑93 (MQ=255)
                             tGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGAc                                                            <  2:1088828/93‑1 (MQ=255)
                             agTTCCGGCAACCAGCTGGTCACCATCCGTTTAGTGGTCTGGAAGGCAGCCGCTTCGAAACCACCGCTTATCGCGCGCAGACCAATTAATGAc                                                            <  2:3829454/92‑1 (MQ=255)
                               ttCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACAt                                                          >  1:4485683/1‑93 (MQ=255)
                               ttCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACAt                                                          <  1:5813591/93‑1 (MQ=255)
                                tCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACAtt                                                         >  2:2877821/1‑93 (MQ=255)
                                  cGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTaa                                                       <  1:659534/93‑1 (MQ=255)
                                  cGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTaa                                                       >  2:9009153/1‑93 (MQ=255)
                                  cGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTaa                                                       <  2:759127/93‑1 (MQ=255)
                                   gggAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAg                                                      >  2:2023809/1‑93 (MQ=255)
                                   gggAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAg                                                      >  1:4958/1‑93 (MQ=255)
                                   gggAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAg                                                      >  1:1321564/1‑93 (MQ=255)
                                    ggAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGc                                                     >  2:1877499/1‑93 (MQ=255)
                                     gAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAATACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGcc                                                    <  1:7237435/93‑1 (MQ=255)
                                      aaCCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGccc                                                   <  2:6402632/93‑1 (MQ=255)
                                        ccAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGt                                                 >  2:7044273/1‑93 (MQ=255)
                                        ccAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGt                                                 <  2:7398598/93‑1 (MQ=255)
                                        ccAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGt                                                 <  1:3425035/93‑1 (MQ=255)
                                         cAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTg                                                <  2:5206548/93‑1 (MQ=255)
                                         cAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTg                                                <  1:1593359/93‑1 (MQ=255)
                                           gCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGc                                              >  2:8795124/1‑93 (MQ=255)
                                            cTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCa                                             >  1:2666007/1‑93 (MQ=255)
                                             tGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCaa                                            <  1:6700922/93‑1 (MQ=255)
                                              ggTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCaaa                                           <  2:5432819/93‑1 (MQ=255)
                                              ggTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCaaa                                           >  1:4629243/1‑93 (MQ=255)
                                                 cACCATCCTGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGcc                                        <  2:4630678/93‑1 (MQ=255)
                                                    cATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTg                                     >  2:3427955/1‑93 (MQ=255)
                                                     aTCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTgg                                    <  2:9342206/93‑1 (MQ=255)
                                                        cGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAAt                                 >  2:671745/1‑93 (MQ=255)
                                                           ttATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATaaa                              <  1:9945494/93‑1 (MQ=255)
                                                           ttATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATaaa                              <  1:6251939/93‑1 (MQ=255)
                                                           ttATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATaaa                              >  2:7839904/1‑93 (MQ=255)
                                                           ttATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATaaa                              >  1:2461825/1‑93 (MQ=255)
                                                           ttATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATaaa                              <  2:4430810/93‑1 (MQ=255)
                                                              ttGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTc                           <  1:4096002/93‑1 (MQ=255)
                                                                tgTCGGGAAAGCAGGCGCTTCGAAAACACCGGTGATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGc                         <  1:9722689/92‑1 (MQ=255)
                                                                ggTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGc                         <  2:1512543/93‑1 (MQ=255)
                                                                   cGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCAc                      <  2:9757520/93‑1 (MQ=255)
                                                                    gggAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACt                     <  2:9408258/93‑1 (MQ=255)
                                                                     ggAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTg                    >  2:3043030/1‑93 (MQ=255)
                                                                     ggAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTg                    >  1:6300657/1‑93 (MQ=255)
                                                                      gAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGa                   <  2:8330517/93‑1 (MQ=255)
                                                                       aaaGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGAc                  <  2:80750/93‑1 (MQ=255)
                                                                        aaGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGAcc                 >  2:3880583/1‑93 (MQ=255)
                                                                        aaGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGAcc                 <  1:5475837/93‑1 (MQ=255)
                                                                         aGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCa                >  2:3641322/1‑93 (MQ=255)
                                                                         aGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCa                <  1:1904175/93‑1 (MQ=255)
                                                                         aGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGACCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCa                >  2:2839384/1‑93 (MQ=255)
                                                                          gCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAg               <  2:2278865/93‑1 (MQ=255)
                                                                          gCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAg               >  2:6134432/1‑93 (MQ=255)
                                                                          gCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCAACTGACCAg               >  1:3269129/1‑93 (MQ=255)
                                                                           cAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGc              >  1:8683316/1‑93 (MQ=255)
                                                                             ggCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGAGATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCa            >  1:7544328/1‑93 (MQ=255)
                                                                             ggCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCa            <  2:9260845/93‑1 (MQ=255)
                                                                             ggCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCa            >  2:6273395/1‑93 (MQ=255)
                                                                              gcgcTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCaa           <  2:6615372/93‑1 (MQ=255)
                                                                               cgcTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCaaa          <  1:300789/93‑1 (MQ=255)
                                                                                gcTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAat         >  2:5032999/1‑93 (MQ=255)
                                                                                 cTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCCAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAata        >  1:8343489/1‑93 (MQ=255)
                                                                                 cTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAata        >  2:7962185/1‑93 (MQ=255)
                                                                                 cTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAata        <  2:1026374/93‑1 (MQ=255)
                                                                                  ttCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAatat       >  1:6037773/1‑93 (MQ=255)
                                                                                   tCGAAAACACCGGTTATCGCGCGCAGACCAATTTATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATc      <  1:7835169/93‑1 (MQ=255)
                                                                                   tCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATc      >  1:8143329/1‑93 (MQ=255)
                                                                                   tCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATc      >  1:4784987/1‑93 (MQ=255)
                                                                                     gAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGc    >  2:6924392/1‑93 (MQ=255)
                                                                                     gAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGc    >  2:1907657/1‑93 (MQ=255)
                                                                                       aaaCACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCaa  <  1:2885380/93‑1 (MQ=255)
                                                                                          |                                                                                         
TATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAATACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAA  >  NC_000913/3868922‑3869101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 236 total aligned reads displayed.
ACGTATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAATACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAA  >  NC_000913/3868919‑3869105
                                                                                             |                                                                                             
ACGTATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAAC                                                                                               <  SRR4302540.8926348/94‑1 (MQ=60)
ACGTATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAAC                                                                                               >  SRR4302540.2633856/1‑94 (MQ=60)
ACGTATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAAC                                                                                               <  SRR4302540.2948898/94‑1 (MQ=60)
ACGTATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAAC                                                                                               <  SRR4302540.2293627/94‑1 (MQ=60)
 CGTATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACA                                                                                              >  SRR4302540.7180780/1‑94 (MQ=60)
 CGTATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACA                                                                                              <  SRR4302540.7759013/94‑1 (MQ=60)
  GTATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACAC                                                                                             >  SRR4302540.4575888/1‑94 (MQ=60)
  GTATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACAC                                                                                             >  SRR4302540.8619563/1‑94 (MQ=60)
  GTATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACAC                                                                                             >  SRR4302540.868284/1‑94 (MQ=60)
    ATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCG                                                                                           >  SRR4302540.3150742/1‑94 (MQ=60)
    ATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCG                                                                                           <  SRR4302540.6344599/94‑1 (MQ=60)
    ATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCG                                                                                           >  SRR4302540.5394053/1‑94 (MQ=60)
     TAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGG                                                                                          <  SRR4302540.1981054/94‑1 (MQ=60)
      AAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGT                                                                                         >  SRR4302540.3268058/1‑94 (MQ=60)
      AAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGT                                                                                         >  SRR4302540.9911640/1‑94 (MQ=60)
       AAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTT                                                                                        >  SRR4302540.6457964/1‑94 (MQ=60)
       AAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTT                                                                                        <  SRR4302540.6961593/94‑1 (MQ=60)
        AAACCAGCGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTA                                                                                       <  SRR4302540.8412412/94‑1 (MQ=60)
        AAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTA                                                                                       <  SRR4302540.3032086/94‑1 (MQ=60)
         AACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGGAAACACCGGTTAT                                                                                      >  SRR4302540.2810147/1‑94 (MQ=60)
         AACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTAT                                                                                      <  SRR4302540.657599/94‑1 (MQ=60)
         AACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTAT                                                                                      <  SRR4302540.7167612/94‑1 (MQ=60)
         AACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTAT                                                                                      >  SRR4302540.10087329/1‑94 (MQ=60)
          ACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATC                                                                                     <  SRR4302540.6304322/94‑1 (MQ=60)
           CCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCG                                                                                    <  SRR4302540.6997263/94‑1 (MQ=60)
           CCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCG                                                                                    <  SRR4302540.6864760/94‑1 (MQ=60)
           CCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCG                                                                                    <  SRR4302540.4989504/94‑1 (MQ=60)
           CCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCG                                                                                    >  SRR4302540.1036784/1‑94 (MQ=60)
            CAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGC                                                                                   <  SRR4302540.7626787/94‑1 (MQ=60)
            CAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGC                                                                                   <  SRR4302540.3884667/94‑1 (MQ=60)
             AACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCG                                                                                  <  SRR4302540.6199677/94‑1 (MQ=60)
              ACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGC                                                                                 <  SRR4302540.6260396/94‑1 (MQ=60)
               CGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCG                                                                                >  SRR4302540.4302543/1‑94 (MQ=60)
                GGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGC                                                                               >  SRR4302540.4451281/1‑94 (MQ=60)
                GGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGC                                                                               >  SRR4302540.3210850/1‑94 (MQ=60)
                GGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGGCACCATCCGGTTATTGGTCGGGAGAGAAGGCGCTTCGACAACACCGGTTATCGAGCGC                                                                               >  SRR4302540.968146/1‑94 (MQ=60)
                  CAGAAGCGCGTTCATGTTCCGGGAACCATCTGGTCTCCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAG                                                                             <  SRR4302540.4827272/94‑1 (MQ=60)
                  CAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAG                                                                             <  SRR4302540.7614557/94‑1 (MQ=60)
                  CAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAG                                                                             <  SRR4302540.8680361/94‑1 (MQ=60)
                  CAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAG                                                                             <  SRR4302540.5335101/94‑1 (MQ=60)
                  CACAAGCGCGTCCATGTTCCGCGAGCCAGCTGGTCTCCATCCGATTATTGGTCGGGAAAGCAGGCTCTTCGAAAACACCGGTTATCGCGCGCAG                                                                             <  SRR4302540.4827273/94‑1 (MQ=60)
                   AGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGA                                                                            >  SRR4302540.5447942/1‑94 (MQ=60)
                   AGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGA                                                                            >  SRR4302540.5391413/1‑94 (MQ=60)
                   AGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGA                                                                            >  SRR4302540.3370693/1‑94 (MQ=60)
                   AGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGA                                                                            >  SRR4302540.5343902/1‑94 (MQ=60)
                    GAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGAC                                                                           <  SRR4302540.5401438/94‑1 (MQ=60)
                    GAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGAC                                                                           <  SRR4302540.6262889/94‑1 (MQ=60)
                      AGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCA                                                                         >  SRR4302540.2084201/1‑94 (MQ=60)
                      AGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCA                                                                         >  SRR4302540.2084202/1‑94 (MQ=60)
                         GCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATT                                                                      >  SRR4302540.617243/1‑94 (MQ=60)
                         GCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATT                                                                      <  SRR4302540.9773016/94‑1 (MQ=60)
                         GCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATT                                                                      <  SRR4302540.4960845/94‑1 (MQ=60)
                         GCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATT                                                                      <  SRR4302540.9470887/94‑1 (MQ=60)
                         GCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATT                                                                      >  SRR4302540.7861104/1‑94 (MQ=60)
                         GCGGTCATGTTCCGGGAACCAGCTGGTCACCATGCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATT                                                                      <  SRR4302540.1418814/94‑1 (MQ=60)
                          gggTCATGTTCCGGGATCCAACTGGTCGACATCCTGTTATTGGTGTGGAAAGCAGGCGCTTCGAAAACACCGGTGGTCGCGCGCAGACCAATTA                                                                     <  SRR4302540.995728/91‑1 (MQ=37)
                          CGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTA                                                                     <  SRR4302540.9678099/94‑1 (MQ=60)
                           GTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAA                                                                    >  SRR4302540.8749456/1‑94 (MQ=60)
                           GTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAA                                                                    >  SRR4302540.10148036/1‑94 (MQ=60)
                           GTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAA                                                                    >  SRR4302540.3733120/1‑94 (MQ=60)
                             TCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATG                                                                  <  SRR4302540.5113541/94‑1 (MQ=60)
                              CATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGA                                                                 >  SRR4302540.3573428/1‑94 (MQ=60)
                              CATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGA                                                                 >  SRR4302540.2174780/1‑94 (MQ=60)
                              CATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGA                                                                 >  SRR4302540.25828/1‑94 (MQ=60)
                              CATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGA                                                                 <  SRR4302540.3616300/94‑1 (MQ=60)
                               ATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGAC                                                                >  SRR4302540.4496590/1‑94 (MQ=60)
                               ATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGAC                                                                >  SRR4302540.6749893/1‑94 (MQ=60)
                               ATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGAC                                                                >  SRR4302540.6682572/1‑94 (MQ=60)
                                TGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACA                                                               <  SRR4302540.3770234/94‑1 (MQ=60)
                                 GTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACAT                                                              <  SRR4302540.9041234/94‑1 (MQ=60)
                                 GTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACAT                                                              >  SRR4302540.4534336/1‑94 (MQ=60)
                                 GTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACAT                                                              >  SRR4302540.3548318/1‑94 (MQ=60)
                                 GTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACAT                                                              >  SRR4302540.4523035/1‑94 (MQ=60)
                                 GTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACAT                                                              <  SRR4302540.9319424/94‑1 (MQ=60)
                                 GTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACAT                                                              >  SRR4302540.4942183/1‑94 (MQ=60)
                                  TTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATT                                                             <  SRR4302540.5877848/94‑1 (MQ=60)
                                  TTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATT                                                             <  SRR4302540.6029403/94‑1 (MQ=60)
                                   TCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTA                                                            <  SRR4302540.8590122/94‑1 (MQ=60)
                                    CCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAA                                                           >  SRR4302540.7857551/1‑94 (MQ=60)
                                     CGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAG                                                          <  SRR4302540.666573/94‑1 (MQ=60)
                                     CGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAG                                                          >  SRR4302540.1335333/1‑94 (MQ=60)
                                     CGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAG                                                          <  SRR4302540.8950106/94‑1 (MQ=60)
                                     CGGGAACAAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAG                                                          <  SRR4302540.7199132/94‑1 (MQ=60)
                                      GGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGC                                                         >  SRR4302540.7484109/1‑94 (MQ=60)
                                       GGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCC                                                        >  SRR4302540.4614347/1‑94 (MQ=60)
                                        GAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAATACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCC                                                       <  SRR4302540.7318162/94‑1 (MQ=60)
                                        GAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCC                                                       >  SRR4302540.8808929/1‑94 (MQ=60)
                                        GAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCC                                                       <  SRR4302540.1093021/94‑1 (MQ=60)
                                         ATCCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTGCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCG                                                      <  SRR4302540.4989365/94‑1 (MQ=60)
                                         AACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCG                                                      <  SRR4302540.2866291/94‑1 (MQ=60)
                                         AACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCG                                                      >  SRR4302540.6356370/1‑94 (MQ=60)
                                          ACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGT                                                     >  SRR4302540.5030495/1‑94 (MQ=60)
                                           CCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCTGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTG                                                    <  SRR4302540.3544895/94‑1 (MQ=60)
                                           CCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTG                                                    <  SRR4302540.4130422/94‑1 (MQ=60)
                                           CCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTG                                                    >  SRR4302540.6303534/1‑94 (MQ=60)
                                           CCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTG                                                    <  SRR4302540.3462268/94‑1 (MQ=60)
                                            CAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGG                                                   <  SRR4302540.7677442/94‑1 (MQ=60)
                                            CAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGG                                                   <  SRR4302540.6902618/94‑1 (MQ=60)
                                            CAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGG                                                   <  SRR4302540.10068282/94‑1 (MQ=60)
                                            CAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGG                                                   <  SRR4302540.10068283/94‑1 (MQ=60)
                                            CAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGG                                                   <  SRR4302540.1610768/94‑1 (MQ=60)
                                              GCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCA                                                 >  SRR4302540.2694908/1‑94 (MQ=60)
                                              GCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCA                                                 >  SRR4302540.2083912/1‑94 (MQ=60)
                                               CTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAA                                                <  SRR4302540.7625943/94‑1 (MQ=60)
                                               CTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAA                                                >  SRR4302540.4115001/1‑94 (MQ=60)
                                                TGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAA                                               <  SRR4302540.6774892/94‑1 (MQ=60)
                                                  GTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGC                                             >  SRR4302540.7004030/1‑94 (MQ=60)
                                                   TCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCC                                            <  SRR4302540.3187416/94‑1 (MQ=60)
                                                   TCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCC                                            <  SRR4302540.8024448/94‑1 (MQ=60)
                                                   TCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAACCC                                            >  SRR4302540.3632105/1‑94 (MQ=60)
                                                    CACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCC                                           <  SRR4302540.4462245/94‑1 (MQ=60)
                                                     ACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCG                                          >  SRR4302540.2670908/1‑94 (MQ=60)
                                                      CCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTG                                         >  SRR4302540.5581928/1‑94 (MQ=60)
                                                      CCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTG                                         <  SRR4302540.5681539/94‑1 (MQ=60)
                                                      CCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCACACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTG                                         >  SRR4302540.8231512/1‑94 (MQ=60)
                                                       CATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGG                                        <  SRR4302540.5917848/94‑1 (MQ=60)
                                                       CATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATGAATGACATTAAGCCCGTGGCAAAGCCCTGG                                        <  SRR4302540.3219364/94‑1 (MQ=60)
                                                        ATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGA                                       <  SRR4302540.4808754/94‑1 (MQ=60)
                                                         TCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAA                                      <  SRR4302540.9765991/94‑1 (MQ=60)
                                                         TCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAA                                      >  SRR4302540.5927059/1‑94 (MQ=60)
                                                          CCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAAT                                     <  SRR4302540.9207236/94‑1 (MQ=60)
                                                           CGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATA                                    >  SRR4302540.526416/1‑94 (MQ=60)
                                                            GGTTATTGGTCGGGAAAGCAGGCGCTTCGAAACCACCGGTTATCGCGCGCAGACCAATTAATGACA‑TAAGCCCGTGGCAAAGCCCTGGAATAAA                                  <  SRR4302540.10104227/94‑1 (MQ=60)
                                                            GGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAA                                   >  SRR4302540.4109468/1‑94 (MQ=60)
                                                            GGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAA                                   >  SRR4302540.3566483/1‑94 (MQ=60)
                                                            GGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAA                                   >  SRR4302540.7330642/1‑94 (MQ=60)
                                                            GGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACAAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAA                                   >  SRR4302540.8506277/1‑94 (MQ=60)
                                                             GTTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAA                                  >  SRR4302540.2488323/1‑94 (MQ=60)
                                                              TTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAG                                 <  SRR4302540.5105204/94‑1 (MQ=60)
                                                              TTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAG                                 <  SRR4302540.10061631/94‑1 (MQ=60)
                                                              TTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAG                                 <  SRR4302540.1184211/94‑1 (MQ=60)
                                                              TTATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAG                                 <  SRR4302540.6321504/94‑1 (MQ=60)
                                                                ATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGTCCGTGTCAAAGCCCTtttatttagtc                               >  SRR4302540.9039839/1‑83 (MQ=60)
                                                                ATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTC                               <  SRR4302540.8398166/94‑1 (MQ=60)
                                                                ATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTC                               <  SRR4302540.3160363/94‑1 (MQ=60)
                                                                ATTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTC                               <  SRR4302540.6217432/94‑1 (MQ=60)
                                                                 TTGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCG                              <  SRR4302540.4140190/94‑1 (MQ=60)
                                                                  TGGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATAGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTAGC                             >  SRR4302540.1008874/1‑94 (MQ=60)
                                                                   TGTCGGGAAAGCAGGCGCTTCGAAAACACCGGTGATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCC                            <  SRR4302540.9836900/94‑1 (MQ=60)
                                                                   GGTCGGTAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCC                            >  SRR4302540.996423/1‑94 (MQ=60)
                                                                    GTCGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCA                           >  SRR4302540.1879404/1‑94 (MQ=60)
                                                                      CGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCCCT                         <  SRR4302540.1006982/94‑1 (MQ=60)
                                                                      CGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACT                         <  SRR4302540.1913866/94‑1 (MQ=60)
                                                                      CGGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACT                         >  SRR4302540.565113/1‑94 (MQ=60)
                                                                       GGGAAAGCAGGCGCTTCGAGAACTCCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTG                        <  SRR4302540.2578737/94‑1 (MQ=60)
                                                                       GGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTG                        >  SRR4302540.6370818/1‑94 (MQ=60)
                                                                       GGGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTG                        >  SRR4302540.208693/1‑94 (MQ=60)
                                                                        GGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGA                       >  SRR4302540.8330757/1‑94 (MQ=60)
                                                                        GGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGA                       <  SRR4302540.2756078/94‑1 (MQ=60)
                                                                        GGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGA                       >  SRR4302540.293828/1‑94 (MQ=60)
                                                                        GGAAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGAGGCAAAGCCCTGGAATAAAGTCGCCACTGA                       >  SRR4302540.2890672/1‑94 (MQ=60)
                                                                          AAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACC                     <  SRR4302540.8884938/94‑1 (MQ=60)
                                                                          AAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACC                     <  SRR4302540.6525724/94‑1 (MQ=60)
                                                                          AAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACC                     <  SRR4302540.3603401/94‑1 (MQ=60)
                                                                          AAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACC                     <  SRR4302540.3769237/94‑1 (MQ=60)
                                                                          AAAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACC                     <  SRR4302540.4233757/94‑1 (MQ=60)
                                                                           AAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCA                    <  SRR4302540.4334671/94‑1 (MQ=60)
                                                                           AAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCA                    <  SRR4302540.2373344/94‑1 (MQ=60)
                                                                           AAGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCA                    <  SRR4302540.5536106/94‑1 (MQ=60)
                                                                            AGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAG                   >  SRR4302540.5753277/1‑94 (MQ=60)
                                                                            AGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAG                   <  SRR4302540.1924990/94‑1 (MQ=60)
                                                                            AGCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCAACTGACCAG                   >  SRR4302540.3304808/1‑94 (MQ=60)
                                                                             GCAGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGC                  >  SRR4302540.8784155/1‑94 (MQ=60)
                                                                               AGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGAGATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCA                >  SRR4302540.7628867/1‑94 (MQ=60)
                                                                               AGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGAGATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCA                >  SRR4302540.7628868/1‑94 (MQ=60)
                                                                               AGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCA                >  SRR4302540.4645144/1‑94 (MQ=60)
                                                                               AGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCA                >  SRR4302540.4978275/1‑94 (MQ=60)
                                                                               AGGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTAGCCACTGACCAGCCA                >  SRR4302540.5601198/1‑94 (MQ=60)
                                                                                GGCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAA               >  SRR4302540.981973/1‑94 (MQ=60)
                                                                                GGCGCTTCGAAAACACCGGCTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAA               >  SRR4302540.486591/1‑94 (MQ=60)
                                                                                 GCGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAA              >  SRR4302540.5835064/1‑94 (MQ=60)
                                                                                  CGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAAT             <  SRR4302540.209739/94‑1 (MQ=60)
                                                                                  CGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAAT             <  SRR4302540.303766/94‑1 (MQ=60)
                                                                                  CGCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAAT             <  SRR4302540.2612640/94‑1 (MQ=60)
                                                                                   GCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCCAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATA            >  SRR4302540.8440331/1‑94 (MQ=60)
                                                                                   GCTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATA            >  SRR4302540.9239446/1‑94 (MQ=60)
                                                                                    CTTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATAT           >  SRR4302540.6104805/1‑94 (MQ=60)
                                                                                     TTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATC          >  SRR4302540.4836142/1‑94 (MQ=60)
                                                                                     TTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATC          >  SRR4302540.8237854/1‑94 (MQ=60)
                                                                                     TTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATC          <  SRR4302540.2516862/94‑1 (MQ=60)
                                                                                     TTCGAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATC          <  SRR4302540.1909409/94‑1 (MQ=60)
                                                                                      TCGAAAACACCGGTTATCGCGCGCAGACCAATTTATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCG         <  SRR4302540.7926716/94‑1 (MQ=60)
                                                                                        GAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGACTAAAGACGCCACTGccccaccaaatcacgca       >  SRR4302540.2254697/1‑77 (MQ=60)
                                                                                        GAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCA       >  SRR4302540.1397519/1‑94 (MQ=60)
                                                                                        GAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCA       >  SRR4302540.3271092/1‑94 (MQ=60)
                                                                                        GAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCA       >  SRR4302540.672682/1‑94 (MQ=60)
                                                                                        GAAAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCA       >  SRR4302540.9176445/1‑94 (MQ=60)
                                                                                        GAAAACACCGGTTATCGCGCGAAGACAAATTAATGACATTAAGCCCGTAGCACAGCCCTGGAATCAGGTCGCCACTGACACGCCAAATATCGCA       >  SRR4302540.3271091/1‑94 (MQ=53)
                                                                                          AAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAAT     <  SRR4302540.2281282/94‑1 (MQ=60)
                                                                                          AAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAAT     <  SRR4302540.2916789/94‑1 (MQ=60)
                                                                                          AAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAAT     <  SRR4302540.5794327/94‑1 (MQ=60)
                                                                                          AAACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAAT     <  SRR4302540.4765512/94‑1 (MQ=60)
                                                                                           AACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATA    <  SRR4302540.2971392/94‑1 (MQ=60)
                                                                                           AACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATA    <  SRR4302540.7048389/94‑1 (MQ=60)
                                                                                            ACACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAA   >  SRR4302540.1692069/1‑94 (MQ=60)
                                                                                             CACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAA  >  SRR4302540.1716230/1‑94 (MQ=60)
                                                                                             CACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAA  <  SRR4302540.3353512/94‑1 (MQ=60)
                                                                                             CACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAA  >  SRR4302540.5232174/1‑94 (MQ=60)
                                                                                             CACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAA  >  SRR4302540.1826256/1‑94 (MQ=60)
                                                                                             CACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGCGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAA  >  SRR4302540.5232175/1‑94 (MQ=60)
                                                                                             |                                                                                             
ACGTATAAAAACCAACGGCAGAAGCGCGTTCATGTTCCGGGAACCAGCTGGTCACCATCCGGTTATTGGTCGGGAAAGCAGGCGCTTCGAAAATACCGGTTATCGCGCGCAGACCAATTAATGACATTAAGCCCGTGGCAAAGCCCTGGAATAAAGTCGCCACTGACCAGCCAAATATCGCAATAAA  >  NC_000913/3868919‑3869105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑