Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,888,869	G→A	A335A (GCG→GCA)	tnaB →	low affinity tryptophan permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,888,869	0	G	A	99.3%	1480.3 / ‑3.3	414	A335A (GCG→GCA)	tnaB	low affinity tryptophan permease
Reads supporting (aligned to +/- strand): ref base G (2/1); new base A (217/192); total (221/193)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.33e-01

Only 100 of 471 total aligned reads displayed.

GTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCGTTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAG  >  NC_000913/3888779‑3888960

gttgttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCatt                                                                                           <  1:5384985/93‑1 (MQ=255)

 ttgttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCattg                                                                                          >  1:5927523/1‑93 (MQ=255)

 ttgttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCattg                                                                                          >  1:9191449/1‑93 (MQ=255)

 ttgttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTCTCCCCTGCattt                                                                                          >  2:6631443/1‑92 (MQ=255)

  tgttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCattgt                                                                                         <  2:7300364/93‑1 (MQ=255)

  tgttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCattgt                                                                                         >  1:6780626/1‑93 (MQ=255)

   gttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCCCCTGCcttgtt                                                                                        >  2:536224/1‑93 (MQ=255)

   gttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCattgtt                                                                                        <  1:1754544/93‑1 (MQ=255)

   gttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCattgtt                                                                                        <  1:7456071/93‑1 (MQ=255)

   gttCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCattgtt                                                                                        >  1:1380808/1‑93 (MQ=255)

   gttCGATTATCTGGCGGACCTGTTTAAGATTAATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCCCCTGCattgtt                                                                                        >  1:6837507/1‑93 (MQ=255)

      cGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTa                                                                                     <  2:7110592/93‑1 (MQ=255)

       gATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCCTCCTGCCACCTGCCTTGTTGTAt                                                                                    >  2:9379782/1‑93 (MQ=255)

        aTTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATc                                                                                   <  2:1216359/93‑1 (MQ=255)

        aTTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATc                                                                                   <  1:8877387/93‑1 (MQ=255)

         ttATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCt                                                                                  <  1:1043392/93‑1 (MQ=255)

         ttATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCCAGCTGTTTACCCTGCTGTCACCTGCATTGCTGTATCt                                                                                  >  2:6119290/1‑93 (MQ=255)

            tCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGAt                                                                               <  1:804576/93‑1 (MQ=255)

              tGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCt                                                                             <  2:4673663/93‑1 (MQ=255)

               ggCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCtt                                                                            >  1:8764773/1‑93 (MQ=255)

               ggCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCtt                                                                            <  2:10003232/93‑1 (MQ=255)

                gCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTc                                                                           <  2:7824505/93‑1 (MQ=255)

                  ggACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTccc                                                                         <  1:2819271/93‑1 (MQ=255)

                  ggACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTccc                                                                         <  2:7957803/93‑1 (MQ=255)

                  ggACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTccc                                                                         <  2:6021032/93‑1 (MQ=255)

                  ggACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTccc                                                                         >  1:3421529/1‑93 (MQ=255)

                   gACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCg                                                                        >  1:9800650/1‑93 (MQ=255)

                      cTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAAc                                                                     <  1:4162034/93‑1 (MQ=255)

                      cTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAAc                                                                     <  1:2108827/93‑1 (MQ=255)

                          ttAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATTTGATGTTCCCGCACGGCt                                                                 >  1:8488673/1‑93 (MQ=255)

                          ttAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGCACGGCt                                                                 >  1:36000/1‑93 (MQ=255)

                          ttAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCt                                                                 <  2:3717612/93‑1 (MQ=255)

                          ttAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCt                                                                 >  1:241439/1‑93 (MQ=255)

                             aGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCctta                                                              >  2:3357398/1‑93 (MQ=255)

                              gATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCtttat                                                             <  1:6409353/93‑1 (MQ=255)

                               aTTGATAACTCCCACGGCGGGGGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCGGCATTGTGGTATCTGATCGTCCCGGACGGGtttatt                                                            >  1:1645510/1‑93 (MQ=255)

                                ttGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCtttattt                                                           >  2:2577015/1‑93 (MQ=255)

                                ctGATAGCTCCCTCGGCGGGCGTTTCAAAACCGTGCTGTTAATCATCCTGCCTCCTGCATTGTTGTATCTGATCTTCCCGAACGGCtttattt                                                           <  1:7656472/92‑1 (MQ=255)

                                 tGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCtttattta                                                          >  1:5221689/1‑93 (MQ=255)

                                 tGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCtttattta                                                          <  2:3584369/93‑1 (MQ=255)

                                  gATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTAc                                                         <  1:7917524/93‑1 (MQ=255)

                                  gATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTAc                                                         >  2:8505374/1‑93 (MQ=255)

                                     aaCTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACggg                                                      <  1:4723451/93‑1 (MQ=255)

                                     aaCTCCCACGGCGGGCGTTTCAAAACCGTGCTGGTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGGcttgtttatcgg                                                      >  1:3273327/1‑89 (MQ=255)

                                      aCTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGa                                                     <  2:6150963/93‑1 (MQ=255)

                                       cTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGAt                                                    <  2:5248476/93‑1 (MQ=255)

                                       cTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGAt                                                    >  1:316097/1‑93 (MQ=255)

                                        tCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATc                                                   >  1:2545520/1‑93 (MQ=255)

                                        tCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATc                                                   >  2:8707154/1‑93 (MQ=255)

                                        tCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATc                                                   <  2:8665027/93‑1 (MQ=255)

                                          ccACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATcgg                                                 >  2:4491891/1‑93 (MQ=255)

                                           cACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATcggc                                                <  1:3069966/93‑1 (MQ=255)

                                           cACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCCTTATTTACGGGATcggc                                                <  1:1575854/93‑1 (MQ=255)

                                            ccggcggGCGTTTCAAAACCGTGCTGTTAACCTTGCTACCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATcggcg                                               <  1:7581331/92‑1 (MQ=255)

                                              ggcgggcgTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGt                                             >  2:213081/1‑93 (MQ=255)

                                              ggcgggcgTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGt                                             <  1:822406/93‑1 (MQ=255)

                                               gcgggcgTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTg                                            >  2:5092676/1‑93 (MQ=255)

                                                ggggcgTTTCAAAACCGGGCTGTTAACCTTCCTGCCGCCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGc                                           <  1:7249520/92‑1 (MQ=255)

                                                 gggcgTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGcc                                          >  1:7882488/1‑93 (MQ=255)

                                                 gggcgTTTCAAAACCGTGCTGTTAACCTGCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGcc                                          <  1:4024343/93‑1 (MQ=255)

                                                  ggggTTTCAAAACCGTGCTGGTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCg                                         <  2:1858117/90‑1 (MQ=255)

                                                  ggcgTTTCCCACCCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGACCGGCTTTATTTACGGGATCGGCGGTGCCg                                         <  2:8945422/93‑1 (MQ=255)

                                                  ggcgTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCg                                         <  1:4418593/93‑1 (MQ=255)

                                                  ggcgTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCg                                         <  2:223653/93‑1 (MQ=255)

                                                   gcgTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCgg                                        <  2:746898/93‑1 (MQ=255)

                                                     gTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGc                                      >  1:5637957/1‑93 (MQ=255)

                                                      tttCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCTGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCt                                     >  1:8380649/1‑93 (MQ=255)

                                                      tttCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCt                                     >  1:9639697/1‑93 (MQ=255)

                                                      tttCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCt                                     >  1:9066764/1‑93 (MQ=255)

                                                         cAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCtgtg                                  <  1:7144512/93‑1 (MQ=255)

                                                           aaaCCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTgcg                                >  1:467660/1‑93 (MQ=255)

                                                           aaaCCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTgcg                                >  2:4178105/1‑93 (MQ=255)

                                                            aaCCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTgcgc                               <  2:9716084/93‑1 (MQ=255)

                                                               cGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGccac                            <  2:6962246/93‑1 (MQ=255)

                                                                gTGCTGTTAACCTTACTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGccacc                           >  2:5474842/1‑93 (MQ=255)

                                                                      ttAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTgg                     >  2:9134552/1‑93 (MQ=255)

                                                                      ttAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTgg                     >  2:2848063/1‑93 (MQ=255)

                                                                       tAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTggg                    >  2:2393931/1‑93 (MQ=255)

                                                                        aaCCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGc                   >  2:6464664/1‑93 (MQ=255)

                                                                            ttCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGGTCGGCGGTTCCGGGCTGTGCGCCACCGTCTTGGCGGTc               >  2:8313128/1‑93 (MQ=255)

                                                                            ttCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTc               >  2:2518777/1‑93 (MQ=255)

                                                                               cTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatt            >  2:3992203/1‑93 (MQ=255)

                                                                               cTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatt            >  1:9464275/1‑93 (MQ=255)

                                                                               cTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatt            >  2:7654845/1‑93 (MQ=255)

                                                                                tGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatta           <  2:163955/93‑1 (MQ=255)

                                                                                tGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatta           <  2:3813198/93‑1 (MQ=255)

                                                                                tGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatta           <  1:3798636/93‑1 (MQ=255)

                                                                                tGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCatta           >  2:4376752/1‑93 (MQ=255)

                                                                                  ccACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCattatt         <  1:6590868/93‑1 (MQ=255)

                                                                                    aCCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTcc       >  2:6327164/1‑93 (MQ=255)

                                                                                    aCCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTcc       <  2:2980320/93‑1 (MQ=255)

                                                                                    aCCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTcc       <  2:8822148/93‑1 (MQ=255)

                                                                                    aCCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTcc       >  1:2074404/1‑93 (MQ=255)

                                                                                    aCCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTACGCCACAATCTGGGCGGTCATTATTcc       >  2:3111305/1‑93 (MQ=255)

                                                                                     ccTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGGCACCATCTGGGCGGTCATTATTccc      >  2:5700073/1‑93 (MQ=255)

                                                                                     ccTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTccc      >  2:1433675/1‑93 (MQ=255)

                                                                                     ccTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTccc      >  1:6223068/1‑93 (MQ=255)

                                                                                       tGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGc    <  2:3527710/93‑1 (MQ=255)

                                                                                       tGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGc    >  1:5043997/1‑93 (MQ=255)

                                                                                         cGTTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAg  >  1:1247320/1‑93 (MQ=255)

GTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCGTTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAG  >  NC_000913/3888779‑3888960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 267 total aligned reads displayed.

GGGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCGTTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTG  >  NC_000913/3888776‑3888962

GGGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCA                                                                                               >  SRR4302540.4112735/1‑94 (MQ=60)

GGGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCA                                                                                               <  SRR4302540.1799208/94‑1 (MQ=60)

GGGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCA                                                                                               >  SRR4302540.8040431/1‑94 (MQ=60)

GGGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCA                                                                                               <  SRR4302540.6235432/94‑1 (MQ=60)

GGGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCA                                                                                               >  SRR4302540.5841038/1‑94 (MQ=60)

GGGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCA                                                                                               <  SRR4302540.4788892/94‑1 (MQ=60)

 GGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCAT                                                                                              >  SRR4302540.8647234/1‑94 (MQ=60)

 GGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCAT                                                                                              <  SRR4302540.6504043/94‑1 (MQ=60)

  GGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATT                                                                                             <  SRR4302540.479125/94‑1 (MQ=60)

   GTTGTTCGATTGTCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGGTTCAAAACCGTGCTGTTAACCTTCCTGCCACCCGCATTG                                                                                            >  SRR4302540.7584088/1‑94 (MQ=60)

   GTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCCCCTGCATTG                                                                                            >  SRR4302540.4790268/1‑94 (MQ=60)

   GTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTG                                                                                            <  SRR4302540.5444214/94‑1 (MQ=60)

   GTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTG                                                                                            >  SRR4302540.5993013/1‑94 (MQ=60)

    TTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGT                                                                                           <  SRR4302540.1151780/94‑1 (MQ=60)

    TTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGT                                                                                           >  SRR4302540.6196965/1‑94 (MQ=60)

    TTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGT                                                                                           >  SRR4302540.6855598/1‑94 (MQ=60)

    TTGTTCGATTATCTGGCGGACCTGTTGAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGT                                                                                           <  SRR4302540.9635704/94‑1 (MQ=60)

     TGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTT                                                                                          >  SRR4302540.6913239/1‑94 (MQ=60)

     TGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTT                                                                                          >  SRR4302540.1828276/1‑94 (MQ=60)

     TGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTT                                                                                          >  SRR4302540.1395541/1‑94 (MQ=60)

     TGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTT                                                                                          >  SRR4302540.5453590/1‑94 (MQ=60)

     TGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTT                                                                                          >  SRR4302540.5837867/1‑94 (MQ=60)

     TGTTCGATTATCTGGCGGACCTGTTTAAGATTAATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCCCCTGCATTGTT                                                                                          >  SRR4302540.6913240/1‑94 (MQ=60)

     TCTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGGGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTT                                                                                          >  SRR4302540.194873/1‑94 (MQ=60)

      GTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTG                                                                                         <  SRR4302540.7539200/94‑1 (MQ=60)

       TTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTTTTTACCTTCCTGCCACCTGCATTGTTGT                                                                                        >  SRR4302540.7744431/1‑94 (MQ=60)

       TTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGT                                                                                        <  SRR4302540.9358/94‑1 (MQ=60)

         CGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTAT                                                                                      >  SRR4302540.3159788/1‑94 (MQ=60)

           ATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCT                                                                                    <  SRR4302540.8980120/94‑1 (MQ=60)

            TTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTG                                                                                   <  SRR4302540.8946054/94‑1 (MQ=60)

            TTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTG                                                                                   <  SRR4302540.1053998/94‑1 (MQ=60)

            TTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTG                                                                                   <  SRR4302540.7340561/94‑1 (MQ=60)

             TATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGA                                                                                  <  SRR4302540.472276/94‑1 (MQ=60)

               TCTGGCGGACCTGTTTAAGATTGATACCTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATC                                                                                <  SRR4302540.4243351/94‑1 (MQ=60)

               TCTGGCGGACCTGTTTAAGATTGATACCTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATC                                                                                <  SRR4302540.3827905/94‑1 (MQ=60)

               TCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATC                                                                                <  SRR4302540.813121/94‑1 (MQ=60)

                CTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCT                                                                               >  SRR4302540.7356274/1‑94 (MQ=60)

                CTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCT                                                                               <  SRR4302540.4648123/94‑1 (MQ=60)

                 TGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTT                                                                              >  SRR4302540.8866379/1‑94 (MQ=60)

                 TGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTT                                                                              <  SRR4302540.8428232/94‑1 (MQ=60)

                 TGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTT                                                                              >  SRR4302540.9394316/1‑94 (MQ=60)

                    CGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAACACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCC                                                                           >  SRR4302540.10065238/1‑94 (MQ=60)

                    CGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCC                                                                           >  SRR4302540.3458735/1‑94 (MQ=60)

                    CGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCC                                                                           >  SRR4302540.965674/1‑94 (MQ=60)

                     GGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCG                                                                          <  SRR4302540.2849722/94‑1 (MQ=60)

                     GGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCG                                                                          >  SRR4302540.9915401/1‑94 (MQ=60)

                        CCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAAC                                                                       <  SRR4302540.3619871/94‑1 (MQ=60)

                        CCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAAC                                                                       <  SRR4302540.6083394/94‑1 (MQ=60)

                        CCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAAC                                                                       <  SRR4302540.8728209/94‑1 (MQ=60)

                         CTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCccacc                                                                      >  SRR4302540.9535452/1‑89 (MQ=60)

                         CTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACG                                                                      <  SRR4302540.4207149/94‑1 (MQ=60)

                         CTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACG                                                                      <  SRR4302540.2131458/94‑1 (MQ=60)

                         CTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACG                                                                      <  SRR4302540.3900761/94‑1 (MQ=60)

                         CTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACG                                                                      >  SRR4302540.7329524/1‑94 (MQ=60)

                          TGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGG                                                                     >  SRR4302540.5348370/1‑94 (MQ=60)

                          TGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGG                                                                     >  SRR4302540.4728662/1‑94 (MQ=60)

                           GTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGC                                                                    >  SRR4302540.5270274/1‑94 (MQ=60)

                            TTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATTTGATGTTCCCGCACGGCT                                                                   >  SRR4302540.8587302/1‑94 (MQ=60)

                            TTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGCACGGCT                                                                   >  SRR4302540.36372/1‑94 (MQ=60)

                            TTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCT                                                                   <  SRR4302540.9945354/94‑1 (MQ=60)

                            TTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCT                                                                   >  SRR4302540.243772/1‑94 (MQ=60)

                             TTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTT                                                                  >  SRR4302540.3748707/1‑94 (MQ=60)

                             TTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTT                                                                  >  SRR4302540.3748709/1‑94 (MQ=60)

                               AAGATTGATAACTCCCACGGCGGGCGGTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCCTTGTTGTATCTGGTCTTCCCGAACGGCTTTT                                                                >  SRR4302540.2908305/1‑94 (MQ=60)

                                AGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTAT                                                               >  SRR4302540.7692599/1‑94 (MQ=60)

                                AGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGGGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACCGCTTTCT                                                               >  SRR4302540.7692600/1‑94 (MQ=60)

                                 GATTGATAACTCCCACGGCGGGGGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCGGCATTGTGGTATCTGATCGTCCCGGACGGGTTTATT                                                              >  SRR4302540.1663475/1‑94 (MQ=60)

                                 GATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATT                                                              <  SRR4302540.6480686/94‑1 (MQ=60)

                                  ATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTT                                                             <  SRR4302540.6700161/94‑1 (MQ=60)

                                   TTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGCACGGCTTTATTTA                                                            >  SRR4302540.157310/1‑94 (MQ=60)

                                   TTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTA                                                            >  SRR4302540.5411071/1‑94 (MQ=60)

                                   CTGATAGCTCCCTCGGCGGGCGTTTCAAAACCGTGCTGTTAATCATCCTGCCTCCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTA                                                            <  SRR4302540.7742678/94‑1 (MQ=60)

                                    ttatagacgcccacgtgttgcttcgtaaatCGTGCTTTTAACCTTCCTGGCACCTGCATTGTTGGATCTGATCGTCCCGAACGGCTTTATTTAC                                                           <  SRR4302540.3529478/64‑1 (MQ=45)

                                    TGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTAC                                                           <  SRR4302540.6404785/94‑1 (MQ=60)

                                     GATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACG                                                          <  SRR4302540.8009819/94‑1 (MQ=60)

                                     GATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACG                                                          <  SRR4302540.8009817/94‑1 (MQ=60)

                                      ATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGG                                                         <  SRR4302540.8417555/94‑1 (MQ=60)

                                      ATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGGTATCCTTCCTGCCACCTGCGTTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGG                                                         <  SRR4302540.9237999/94‑1 (MQ=60)

                                       TAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGG                                                        <  SRR4302540.9415637/94‑1 (MQ=60)

                                       TAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGG                                                        >  SRR4302540.8546796/1‑94 (MQ=60)

                                       TAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGG                                                        >  SRR4302540.7736446/1‑94 (MQ=60)

                                       TAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGGTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGgcttgtttatcgg                                                        >  SRR4302540.3309058/1‑81 (MQ=60)

                                        AACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGA                                                       >  SRR4302540.3454767/1‑94 (MQ=60)

                                        AACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGA                                                       <  SRR4302540.2912013/94‑1 (MQ=60)

                                        AACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGA                                                       >  SRR4302540.2817271/1‑94 (MQ=60)

                                        AACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGA                                                       <  SRR4302540.7822366/94‑1 (MQ=60)

                                         ACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGAT                                                      >  SRR4302540.319246/1‑94 (MQ=60)

                                         ACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGAT                                                      >  SRR4302540.7824376/1‑94 (MQ=60)

                                         ACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGAT                                                      <  SRR4302540.9656478/94‑1 (MQ=60)

                                          CTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATC                                                     <  SRR4302540.8078370/94‑1 (MQ=60)

                                          CTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATC                                                     <  SRR4302540.4462457/94‑1 (MQ=60)

                                          CTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATC                                                     >  SRR4302540.4332050/1‑94 (MQ=60)

                                          CTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATC                                                     >  SRR4302540.2572953/1‑94 (MQ=60)

                                           TCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGACCGGCTTTATTTATGGGATGG                                                    >  SRR4302540.3351073/1‑94 (MQ=60)

                                           TCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCG                                                    >  SRR4302540.6509854/1‑94 (MQ=60)

                                           TCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCG                                                    <  SRR4302540.7529486/94‑1 (MQ=60)

                                             CCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGC                                                  >  SRR4302540.2124356/1‑94 (MQ=60)

                                             CCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGC                                                  >  SRR4302540.3295280/1‑94 (MQ=60)

                                              CACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCG                                                 <  SRR4302540.9292746/94‑1 (MQ=60)

                                              CACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCG                                                 >  SRR4302540.7118068/1‑94 (MQ=60)

                                              CACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCCTTATTTACGGGATCGGCG                                                 <  SRR4302540.1593098/94‑1 (MQ=60)

                                               CCGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTGCTACCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGG                                                <  SRR4302540.7666432/94‑1 (MQ=60)

                                               ACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTTCTGCCCCCTGCATTTTTGTATCTGATCTTCCCGAAAGGCTTTTTTTATGGGATCGGCGG                                                >  SRR4302540.587669/1‑94 (MQ=60)

                                                CGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGT                                               <  SRR4302540.1635394/94‑1 (MQ=60)

                                                CGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGT                                               >  SRR4302540.4735561/1‑94 (MQ=60)

                                                CGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGG                                               >  SRR4302540.1743982/1‑94 (MQ=60)

                                                 GGCGGTCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCCTTATTTACGGGATCGGCGGTG                                              <  SRR4302540.87355/94‑1 (MQ=60)

                                                 GGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTG                                              <  SRR4302540.831148/94‑1 (MQ=60)

                                                 GGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTG                                              >  SRR4302540.9151888/1‑94 (MQ=60)

                                                 GGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTG                                              <  SRR4302540.831149/94‑1 (MQ=60)

                                                  GCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGC                                             >  SRR4302540.1645437/1‑94 (MQ=60)

                                                  GCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGC                                             <  SRR4302540.2107965/94‑1 (MQ=60)

                                                   CGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCC                                            >  SRR4302540.7974527/1‑94 (MQ=60)

                                                    GGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGgggcg                                           >  SRR4302540.290064/1‑89 (MQ=60)

                                                    GGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCG                                           >  SRR4302540.10062649/1‑94 (MQ=60)

                                                    GGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCG                                           >  SRR4302540.7216642/1‑94 (MQ=60)

                                                    GGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCG                                           >  SRR4302540.6741939/1‑94 (MQ=60)

                                                     GGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGG                                          <  SRR4302540.4466470/94‑1 (MQ=60)

                                                     GGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGG                                          <  SRR4302540.3137875/94‑1 (MQ=60)

                                                       CGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGC                                        >  SRR4302540.5700012/1‑94 (MQ=60)

                                                        GTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCTGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCT                                       >  SRR4302540.8477891/1‑94 (MQ=60)

                                                        GTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCT                                       >  SRR4302540.9175633/1‑94 (MQ=60)

                                                        GTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCT                                       <  SRR4302540.4719994/94‑1 (MQ=60)

                                                        GTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCT                                       >  SRR4302540.9753257/1‑94 (MQ=60)

                                                        GTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCT                                       >  SRR4302540.394583/1‑94 (MQ=60)

                                                         TTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTG                                      <  SRR4302540.5573635/94‑1 (MQ=60)

                                                         TTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTG                                      >  SRR4302540.166889/1‑94 (MQ=60)

                                                            CAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGC                                   <  SRR4302540.1406831/94‑1 (MQ=60)

                                                            CAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGC                                   <  SRR4302540.7224118/94‑1 (MQ=60)

                                                            CAAAACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGC                                   >  SRR4302540.498388/1‑94 (MQ=60)

                                                               AACCGTGCTGTTAACCTTCCTGCCCCCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCCCC                                >  SRR4302540.2505885/1‑94 (MQ=60)

                                                               AACCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCC                                >  SRR4302540.2505886/1‑94 (MQ=60)

                                                                 CCGTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCAC                              <  SRR4302540.9779494/94‑1 (MQ=60)

                                                                   GTGCTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCA                            >  SRR4302540.8892624/1‑94 (MQ=60)

                                                                      GTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCT                         <  SRR4302540.7183372/94‑1 (MQ=60)

                                                                      CTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGCTCGGCGGTGCCGGGCTGTGCGCCCCCATCT                         >  SRR4302540.136270/1‑94 (MQ=60)

                                                                      CTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCT                         >  SRR4302540.1801422/1‑94 (MQ=60)

                                                                      CTGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCT                         <  SRR4302540.8267299/94‑1 (MQ=60)

                                                                       TGTTAACCTTCCTGGCACCTGCATTGTTGTATCTGATCTTCCCGACCGGATTTATTTCCGGGATGGGCGGTGCCGGGCTGTGGGCCCCAATCTG                        >  SRR4302540.7268178/1‑94 (MQ=60)

                                                                       TGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTG                        >  SRR4302540.7995111/1‑94 (MQ=60)

                                                                       TGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTG                        <  SRR4302540.3054969/94‑1 (MQ=60)

                                                                       TGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTG                        >  SRR4302540.7646247/1‑94 (MQ=60)

                                                                       TGTTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTG                        >  SRR4302540.2313408/1‑94 (MQ=60)

                                                                         TTAACCTTCCTGCCACCTGCATTGTTGTATCTGATCTGCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGG                      <  SRR4302540.1221345/94‑1 (MQ=60)

                                                                           AACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATAGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCG                    <  SRR4302540.7279698/94‑1 (MQ=60)

                                                                           AACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCCTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCG                    <  SRR4302540.8514437/94‑1 (MQ=60)

                                                                            ACCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGG                   >  SRR4302540.2482510/1‑94 (MQ=60)

                                                                             CCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGT                  <  SRR4302540.3169128/94‑1 (MQ=60)

                                                                             CCTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGT                  >  SRR4302540.6765521/1‑94 (MQ=60)

                                                                              CTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTC                 >  SRR4302540.1372826/1‑94 (MQ=60)

                                                                              CTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTC                 >  SRR4302540.6580507/1‑94 (MQ=60)

                                                                              CTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTC                 >  SRR4302540.3260646/1‑94 (MQ=60)

                                                                              CTTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCCTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTC                 >  SRR4302540.688541/1‑94 (MQ=60)

                                                                               TTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCA                >  SRR4302540.9204030/1‑94 (MQ=60)

                                                                               TTCCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCA                >  SRR4302540.4088009/1‑94 (MQ=60)

                                                                               TGCCTGCCCCCTGCCTTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCA                <  SRR4302540.4164830/94‑1 (MQ=60)

                                                                                 CCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATT              >  SRR4302540.9896095/1‑94 (MQ=60)

                                                                                 CCTGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATT              >  SRR4302540.9576557/1‑94 (MQ=60)

                                                                                   cgccgCCTGCATTGTTGTATCTGATCTTCCCGAACGGCCTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTAT            <  SRR4302540.3210974/89‑1 (MQ=60)

                                                                                   TGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTAT            <  SRR4302540.3840024/94‑1 (MQ=60)

                                                                                   TGCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCAACCATCTGGGCGGTCATTAT            <  SRR4302540.2308634/94‑1 (MQ=60)

                                                                                    GCCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATT           <  SRR4302540.3491898/94‑1 (MQ=60)

                                                                                     CCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTC          >  SRR4302540.9134356/1‑94 (MQ=60)

                                                                                     CCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTC          >  SRR4302540.2619378/1‑94 (MQ=60)

                                                                                     CCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTC          <  SRR4302540.6881031/94‑1 (MQ=60)

                                                                                     CCACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTC          <  SRR4302540.6663863/94‑1 (MQ=60)

                                                                                      CACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCC         >  SRR4302540.2096708/1‑94 (MQ=60)

                                                                                      CACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCC         >  SRR4302540.5042306/1‑94 (MQ=60)

                                                                                      CACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCC         >  SRR4302540.8072989/1‑94 (MQ=60)

                                                                                       CCCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCC        <  SRR4302540.5718893/94‑1 (MQ=60)

                                                                                       CCCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCC        <  SRR4302540.660528/94‑1 (MQ=60)

                                                                                       CCCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCC        <  SRR4302540.5217818/94‑1 (MQ=60)

                                                                                       ACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCC        <  SRR4302540.5217817/94‑1 (MQ=60)

                                                                                       ACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCC        >  SRR4302540.6112469/1‑94 (MQ=60)

                                                                                       ACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCC        >  SRR4302540.6292289/1‑94 (MQ=60)

                                                                                       ACCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGGGCCGGGCTGTGCGCCCCCATCTGGGCGGTCATTATTCCC        >  SRR4302540.8345297/1‑94 (MQ=60)

                                                                                        CCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCG       >  SRR4302540.1679870/1‑94 (MQ=60)

                                                                                        CCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCG       >  SRR4302540.8905298/1‑94 (MQ=60)

                                                                                        CCTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCG       <  SRR4302540.8166110/94‑1 (MQ=60)

                                                                                         CTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGC      >  SRR4302540.5098556/1‑94 (MQ=60)

                                                                                         CTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGC      <  SRR4302540.5361813/94‑1 (MQ=60)

                                                                                         CTGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGC      <  SRR4302540.1373140/94‑1 (MQ=60)

                                                                                          TGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCCCCATCTGGGCGGTCATTATTCCCGCA     <  SRR4302540.3986822/94‑1 (MQ=60)

                                                                                          TGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCA     >  SRR4302540.8798734/1‑94 (MQ=60)

                                                                                          TGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCA     <  SRR4302540.4746742/94‑1 (MQ=60)

                                                                                          TGCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCA     <  SRR4302540.1440103/94‑1 (MQ=60)

                                                                                           GCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAG    >  SRR4302540.2385500/1‑94 (MQ=60)

                                                                                           GCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAG    <  SRR4302540.1122563/94‑1 (MQ=60)

                                                                                           GCATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAG    <  SRR4302540.2290194/94‑1 (MQ=60)

                                                                                            CATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGT   <  SRR4302540.3037661/94‑1 (MQ=60)

                                                                                            CATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGT   <  SRR4302540.9537785/94‑1 (MQ=60)

                                                                                            CATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGT   >  SRR4302540.393628/1‑94 (MQ=60)

                                                                                            CATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGT   <  SRR4302540.2202800/94‑1 (MQ=60)

                                                                                            CATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGG   >  SRR4302540.408519/1‑94 (MQ=60)

                                                                                             ATTGTTTTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTG  <  SRR4302540.3511740/94‑1 (MQ=60)

                                                                                             ATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTG  >  SRR4302540.2762386/1‑94 (MQ=60)

                                                                                             ATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTG  <  SRR4302540.5534664/94‑1 (MQ=60)

                                                                                             ATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTG  >  SRR4302540.6376084/1‑94 (MQ=60)

                                                                                             ATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGCCATTATTCCCGCAGTG  >  SRR4302540.1555299/1‑94 (MQ=60)

                                                                                             ATTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGGGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTG  >  SRR4302540.6376085/1‑94 (MQ=60)

GGGGTTGTTCGATTATCTGGCGGACCTGTTTAAGATTGATAACTCCCACGGCGGGCGTTTCAAAACCGTGCTGTTAACCTTCCTGCCACCTGCGTTGTTGTATCTGATCTTCCCGAACGGCTTTATTTACGGGATCGGCGGTGCCGGGCTGTGCGCCACCATCTGGGCGGTCATTATTCCCGCAGTG  >  NC_000913/3888776‑3888962

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`