Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,894,054	G→T	A62D (GCC→GAC)	yieG ←	putative membrane/transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,894,054	0	G	T	99.6%	1727.6 / ‑2.0	479	A62D (GCC→GAC)	yieG	putative membrane/transport protein
Reads supporting (aligned to +/- strand): ref base G (2/0); new base T (284/193); total (286/193)
Fisher's exact test for biased strand distribution p-value = 5.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.06e-01

Only 100 of 509 total aligned reads displayed.

ATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGGCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATC  >  NC_000913/3893964‑3894143

 tAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGtcgc                                                                                        >  2:5266074/1‑93 (MQ=255)

 tAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGtcgc                                                                                        >  1:5718696/1‑93 (MQ=255)

  aGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCt                                                                                       >  2:19741/1‑93 (MQ=255)

   gCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTg                                                                                      <  2:3408007/93‑1 (MQ=255)

     gggTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGt                                                                                    <  1:6908912/93‑1 (MQ=255)

     gggTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGt                                                                                    >  1:7194245/1‑93 (MQ=255)

        tGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATc                                                                                 <  1:4287034/93‑1 (MQ=255)

          ccAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCa                                                                               <  1:2530766/93‑1 (MQ=255)

          ccAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCa                                                                               >  1:7870979/1‑93 (MQ=255)

          ccAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCa                                                                               <  1:3538621/93‑1 (MQ=255)

           cAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCAt                                                                              >  1:3665022/1‑93 (MQ=255)

             gTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGc                                                                            <  1:6313269/93‑1 (MQ=255)

             gTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGc                                                                            >  1:8233499/1‑93 (MQ=255)

             gTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGc                                                                            >  2:2242466/1‑93 (MQ=255)

              tGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGcc                                                                           >  2:5723263/1‑93 (MQ=255)

               gCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCa                                                                          >  1:6497548/1‑93 (MQ=255)

               gCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCa                                                                          <  2:9093337/93‑1 (MQ=255)

                 aaCTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGc                                                                        >  2:515684/1‑93 (MQ=255)

                  aCTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCa                                                                       >  2:5955979/1‑93 (MQ=255)

                   cTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCaa                                                                      <  1:7417745/93‑1 (MQ=255)

                    tGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAAc                                                                     >  1:5194482/1‑93 (MQ=255)

                     ggCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAAcc                                                                    >  2:1871213/1‑92 (MQ=255)

                     ggCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACg                                                                    >  2:1683954/1‑93 (MQ=255)

                       cAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGcc                                                                  >  2:8065036/1‑93 (MQ=255)

                        aGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCa                                                                 >  1:308106/1‑93 (MQ=255)

                        aGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCa                                                                 <  1:9954883/93‑1 (MQ=255)

                         ggTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCaa                                                                <  2:9258264/93‑1 (MQ=255)

                         ggTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCaa                                                                >  2:4810069/1‑93 (MQ=255)

                          gTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAg                                                               >  1:2359241/1‑93 (MQ=255)

                           ttggCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGa                                                              >  1:2627406/4‑93 (MQ=255)

                           gtggCAAACAGTCCCATCATAATACGGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTCGTATCCATGCCAGCAACGCCAAGa                                                              <  2:9652705/90‑1 (MQ=255)

                             ggCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAAt                                                            >  2:6131926/2‑93 (MQ=255)

                              gCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAAtt                                                           <  1:6566719/93‑1 (MQ=255)

                               cAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAAttt                                                          <  1:7346539/93‑1 (MQ=255)

                               cAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAAttt                                                          <  1:951116/93‑1 (MQ=255)

                                aaaCAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTg                                                         >  2:4682983/1‑93 (MQ=255)

                                 aaCAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGc                                                        >  2:3057208/1‑93 (MQ=255)

                                  aCAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCg                                                       >  1:7560788/1‑93 (MQ=255)

                                    aGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCggg                                                     >  2:3375717/1‑93 (MQ=255)

                                     gTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGt                                                    >  2:8433416/1‑93 (MQ=255)

                                     gTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGt                                                    >  1:1807407/1‑93 (MQ=255)

                                      tCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGtt                                                   >  1:8510583/1‑93 (MQ=255)

                                      tCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGtt                                                   >  1:5888964/1‑93 (MQ=255)

                                         catcatAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAAc                                                >  2:6785583/1‑93 (MQ=255)

                                         catcatAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAAc                                                >  1:9291668/1‑93 (MQ=255)

                                         catcatAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAAc                                                >  2:6520205/1‑93 (MQ=255)

                                         catcatAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAAc                                                >  2:1451450/1‑93 (MQ=255)

                                          atcatAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACa                                               >  2:8216212/1‑93 (MQ=255)

                                           tcatAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACaa                                              >  2:9392037/1‑93 (MQ=255)

                                             ataataCTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACaaaa                                            >  1:8956044/1‑93 (MQ=255)

                                              taataCTGCCGAATGCGGCGATGAGACAGGAAGTGACGAAGACGACGCTGGTGTCCATGATCGCTACGCCAAGAATTTGCGCGATAACaaata                                           >  2:6347904/1‑91 (MQ=255)

                                              taataCTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACaaaaa                                           <  2:3212057/93‑1 (MQ=255)

                                              taataCTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACaaaaa                                           >  1:6736631/1‑93 (MQ=255)

                                              taataCTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACaaaaa                                           >  1:1673494/1‑93 (MQ=255)

                                              taataCTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACaaaaa                                           <  2:880501/93‑1 (MQ=255)

                                               aataCTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAAc                                          <  2:3288722/93‑1 (MQ=255)

                                                   cTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATg                                      <  2:4614258/93‑1 (MQ=255)

                                                    tGCCGAATGCAGCGGTCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGt                                     <  1:3310700/93‑1 (MQ=255)

                                                     gCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTa                                    <  2:7283942/93‑1 (MQ=255)

                                                      ccGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTaa                                   >  1:4524592/1‑93 (MQ=255)

                                                      ccGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTaa                                   <  2:871348/93‑1 (MQ=255)

                                                       cGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTaaa                                  >  1:5463691/1‑93 (MQ=255)

                                                       cGAATGCAGCAATCAGACAAGTAGTGACGACGACGTCGCTGGTATCCATAACAGCAACGCCAAGAATTAGCGGGTTAACAAAAACGATGTaaa                                  <  2:8935790/93‑1 (MQ=255)

                                                        gAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCGAGAATTTGCGGGTTAACAAAAACGATGTAAAc                                 >  1:1996158/1‑93 (MQ=255)

                                                        gAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAAc                                 <  2:1597756/93‑1 (MQ=255)

                                                        gAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAAc                                 <  2:24308/93‑1 (MQ=255)

                                                        gAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAAc                                 <  2:4463785/93‑1 (MQ=255)

                                                        gAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAAc                                 >  2:7803420/1‑93 (MQ=255)

                                                         aaTGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAAcc                                <  2:2095574/93‑1 (MQ=255)

                                                          aTGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCa                               <  2:953206/93‑1 (MQ=255)

                                                           tGCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCAt                              >  1:8389535/1‑93 (MQ=255)

                                                            gCAGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATc                             >  2:5037184/1‑93 (MQ=255)

                                                              aGCGATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGt                           <  1:5038469/93‑1 (MQ=255)

                                                                 gATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAg                        >  2:10040085/1‑93 (MQ=255)

                                                                 gATCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAg                        >  2:3720498/1‑93 (MQ=255)

                                                                  aTCAGACAGGTAGTGACGAAGACGTCGGTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAgg                       <  2:1181345/93‑1 (MQ=255)

                                                                  aTCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAgg                       >  1:4041380/1‑93 (MQ=255)

                                                                   tCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGCTGTAAACCATCGGCAGGa                      >  1:2929629/1‑93 (MQ=255)

                                                                   tCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAgaa                      <  1:6414610/93‑3 (MQ=255)

                                                                   tCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGa                      >  2:3929243/1‑93 (MQ=255)

                                                                   tCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGa                      <  2:2714628/93‑1 (MQ=255)

                                                                   tCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGa                      <  1:1515785/93‑1 (MQ=255)

                                                                   tCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGa                      >  1:3224469/1‑93 (MQ=255)

                                                                   tCAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGa                      >  1:6080230/1‑93 (MQ=255)

                                                                    cAGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGaa                     <  2:7166214/93‑1 (MQ=255)

                                                                     aGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAg                    >  2:5868400/1‑93 (MQ=255)

                                                                     aGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAg                    >  2:430706/1‑93 (MQ=255)

                                                                     aGACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAg                    <  1:7727831/93‑1 (MQ=255)

                                                                      gACAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAgg                   <  2:4173344/93‑1 (MQ=255)

                                                                       aCAGGTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAggt                  <  2:7499861/93‑1 (MQ=255)

                                                                           gTAGTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTa              <  1:802584/93‑1 (MQ=255)

                                                                              gTGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTaaaa           >  2:6228915/1‑93 (MQ=255)

                                                                               tGACGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGAAAGGTGGTAAAAc          >  1:4334331/1‑93 (MQ=255)

                                                                                  cGAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCgg       >  1:1322165/1‑93 (MQ=255)

                                                                                   gAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGc      >  1:9688305/1‑93 (MQ=255)

                                                                                   gAAGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGAAAGGTGGTAAAACCGGc      <  1:483967/93‑1 (MQ=255)

                                                                                    aaGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCg     >  1:6216226/1‑93 (MQ=255)

                                                                                    aaGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCg     >  1:1008108/1‑93 (MQ=255)

                                                                                     aGACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGa    <  1:2181604/93‑1 (MQ=255)

                                                                                      gACGTCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGAt   >  1:8699408/1‑93 (MQ=255)

ATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGGCGCTGGTATCCATGCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATC  >  NC_000913/3893964‑3894143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 274 total aligned reads displayed.

CCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGGCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATCACT  >  NC_000913/3893961‑3894146

CCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGT                                                                                                <  SRR4302540.2161854/94‑1 (MQ=60)

CCCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGT                                                                                                >  SRR4302540.2673430/1‑94 (MQ=60)

 CCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTC                                                                                               <  SRR4302540.7000533/94‑1 (MQ=60)

 CCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTC                                                                                               >  SRR4302540.6890677/1‑94 (MQ=60)

 CCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTC                                                                                               >  SRR4302540.638862/1‑94 (MQ=60)

 CCATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTC                                                                                               >  SRR4302540.146752/1‑94 (MQ=60)

 CCATAGCGGGTGCCAGTGCAACTGGCAGGTGGGCAAACGGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTC                                                                                               <  SRR4302540.210966/94‑1 (MQ=60)

  CATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG                                                                                              >  SRR4302540.5444963/1‑94 (MQ=60)

   ATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑C                                                                                            >  SRR4302540.5781640/1‑94 (MQ=60)

   ATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑C                                                                                            >  SRR4302540.5678232/1‑94 (MQ=60)

   ATAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑C                                                                                            >  SRR4302540.3073650/1‑94 (MQ=60)

    TCGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAAACGTCG‑CT                                                                                           <  SRR4302540.5906303/94‑1 (MQ=60)

    TAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CT                                                                                           <  SRR4302540.5906301/94‑1 (MQ=60)

    TAGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CT                                                                                           >  SRR4302540.5729476/1‑94 (MQ=60)

     AGCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTG                                                                                          <  SRR4302540.4530624/94‑1 (MQ=60)

      GCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGG                                                                                         <  SRR4302540.1546166/94‑1 (MQ=60)

      GCGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGG                                                                                         <  SRR4302540.4240459/94‑1 (MQ=60)

       CGGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGC                                                                                        >  SRR4302540.6175338/1‑94 (MQ=60)

        GGGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTA                                                                                       <  SRR4302540.5310633/94‑1 (MQ=60)

        GGGGGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGGAGTGACGAAGACGTCG‑CTGGTA                                                                                       <  SRR4302540.6985771/94‑1 (MQ=60)

         GGTGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTAT                                                                                      >  SRR4302540.8389972/1‑94 (MQ=60)

           TGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCC                                                                                    <  SRR4302540.10059105/94‑1 (MQ=60)

           TGCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCC                                                                                    <  SRR4302540.1914956/94‑1 (MQ=60)

            GCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCA                                                                                   >  SRR4302540.2563356/1‑94 (MQ=60)

            GCCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAAACGTCG‑CTGGTATCCA                                                                                   >  SRR4302540.2563355/1‑94 (MQ=60)

             CCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATATTACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT                                                                                  <  SRR4302540.9691864/94‑1 (MQ=60)

             CCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT                                                                                  <  SRR4302540.2558075/94‑1 (MQ=60)

             CCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT                                                                                  >  SRR4302540.3705131/1‑94 (MQ=60)

             CCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT                                                                                  >  SRR4302540.8274666/1‑94 (MQ=60)

             CCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT                                                                                  <  SRR4302540.3577259/94‑1 (MQ=60)

             CCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT                                                                                  <  SRR4302540.7962069/94‑1 (MQ=60)

             CCAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT                                                                                  >  SRR4302540.7869092/1‑94 (MQ=60)

              CAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGAGGAAGACGTCG‑CTGGTATCCAT‑G                                                                                >  SRR4302540.4972815/1‑94 (MQ=60)

              CAGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑G                                                                                <  SRR4302540.4708077/94‑1 (MQ=60)

               AGTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTCTCCAT‑GC                                                                               >  SRR4302540.6819138/1‑94 (MQ=60)

                GTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCC                                                                              <  SRR4302540.6957586/94‑1 (MQ=60)

                GTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCC                                                                              <  SRR4302540.6383571/94‑1 (MQ=60)

                GTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCC                                                                              >  SRR4302540.5247485/1‑94 (MQ=60)

                GTGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCC                                                                              <  SRR4302540.1869218/94‑1 (MQ=60)

                 TGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCG                                                                             >  SRR4302540.8526373/1‑94 (MQ=60)

                 TGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCA                                                                             <  SRR4302540.4419188/94‑1 (MQ=60)

                 TGCAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCA                                                                             >  SRR4302540.9935733/1‑94 (MQ=60)

                   CAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGC                                                                           <  SRR4302540.3770817/94‑1 (MQ=60)

                   CAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGC                                                                           <  SRR4302540.1334724/94‑1 (MQ=60)

                   CAACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGC                                                                           <  SRR4302540.7261426/94‑1 (MQ=60)

                    AACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCA                                                                          >  SRR4302540.2191613/1‑94 (MQ=60)

                    AACTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCA                                                                          >  SRR4302540.7999618/1‑94 (MQ=60)

                      CTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAAC                                                                        >  SRR4302540.5251047/1‑94 (MQ=60)

                      CTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAAC                                                                        <  SRR4302540.7500366/94‑1 (MQ=60)

                      CTGGCAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAAC                                                                        >  SRR4302540.254376/1‑94 (MQ=60)

                          CAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCA                                                                    >  SRR4302540.311163/1‑94 (MQ=60)

                          CAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCA                                                                    >  SRR4302540.7430180/1‑94 (MQ=60)

                          CAGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGGATCCAT‑GCCAGAAACGCCA                                                                    >  SRR4302540.6492601/1‑94 (MQ=60)

                           AGGTTGGCAAACAGTCCCATCATAATGCTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAA                                                                   <  SRR4302540.5026128/94‑1 (MQ=60)

                           AGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAA                                                                   <  SRR4302540.10071081/94‑1 (MQ=60)

                           AGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAA                                                                   >  SRR4302540.2327500/1‑94 (MQ=60)

                           AGGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAA                                                                   >  SRR4302540.661378/1‑94 (MQ=60)

                            GGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAG                                                                  >  SRR4302540.2384656/1‑94 (MQ=60)

                            GGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAG                                                                  <  SRR4302540.8272908/94‑1 (MQ=60)

                            GGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAG                                                                  <  SRR4302540.9146231/94‑1 (MQ=60)

                            GGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAG                                                                  <  SRR4302540.10022284/94‑1 (MQ=60)

                            GGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAG                                                                  <  SRR4302540.9572628/94‑1 (MQ=60)

                            GGTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAA                                                                  >  SRR4302540.8027283/1‑94 (MQ=60)

                             GTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGA                                                                 >  SRR4302540.2655832/1‑94 (MQ=60)

                             GTTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGA                                                                 >  SRR4302540.1573518/1‑94 (MQ=60)

                              TTGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAA                                                                >  SRR4302540.5119085/1‑94 (MQ=60)

                               TGGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAAT                                                               <  SRR4302540.9311609/94‑1 (MQ=60)

                                GGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATT                                                              >  SRR4302540.903182/1‑94 (MQ=60)

                                 GCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTT                                                             <  SRR4302540.6370225/94‑1 (MQ=60)

                                 GCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTT                                                             <  SRR4302540.6639490/94‑1 (MQ=60)

                                 GCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTT                                                             >  SRR4302540.3300845/1‑94 (MQ=60)

                                 GCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTT                                                             <  SRR4302540.9585940/94‑1 (MQ=60)

                                 GCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTAG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTT                                                             >  SRR4302540.4331714/1‑94 (MQ=60)

                                 GCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAG‑CGGTGCCTGGCATCCAT‑GACAGCAACGCAAAGAATTG                                                             >  SRR4302540.3300844/1‑94 (MQ=60)

                                  CAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTG                                                            <  SRR4302540.7428508/94‑1 (MQ=60)

                                  CAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTG                                                            <  SRR4302540.960999/94‑1 (MQ=60)

                                  CAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTG                                                            <  SRR4302540.8905971/94‑1 (MQ=60)

                                  CAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTG                                                            >  SRR4302540.1924897/1‑94 (MQ=60)

                                  CAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTG                                                            <  SRR4302540.3374396/94‑1 (MQ=60)

                                   AAACAGTCCCATCATAATACTGGCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCActgccccgaatttgc                                                           >  SRR4302540.5325532/1‑79 (MQ=60)

                                   AAACACTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGC                                                           >  SRR4302540.6577923/1‑94 (MQ=60)

                                     ACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGG                                                         <  SRR4302540.2848824/94‑1 (MQ=60)

                                      CAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGG                                                        <  SRR4302540.6787620/94‑1 (MQ=60)

                                       AGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGT                                                       >  SRR4302540.7680904/1‑94 (MQ=60)

                                       AGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGT                                                       >  SRR4302540.7680903/1‑94 (MQ=60)

                                       AGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGT                                                       >  SRR4302540.1827097/1‑94 (MQ=60)

                                       AGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGT                                                       >  SRR4302540.2915054/1‑94 (MQ=60)

                                       AGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGT                                                       >  SRR4302540.1650720/1‑94 (MQ=60)

                                       AGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGT                                                       <  SRR4302540.3631236/94‑1 (MQ=60)

                                        GTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTT                                                      >  SRR4302540.8609488/1‑94 (MQ=60)

                                        GTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTT                                                      >  SRR4302540.5954028/1‑94 (MQ=60)

                                        GTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGCT                                                      >  SRR4302540.9771396/1‑94 (MQ=60)

                                         TCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTA                                                     >  SRR4302540.8570078/1‑94 (MQ=60)

                                          CCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAA                                                    >  SRR4302540.6367779/1‑94 (MQ=60)

                                          CCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAA                                                    >  SRR4302540.503276/1‑94 (MQ=60)

                                          CCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAA                                                    >  SRR4302540.2973392/1‑94 (MQ=60)

                                           CCATCATAATACTGCCGAATGCAGCGATCAGCCAGGCAGTGACGAAGACCTCA‑CTGTTATCCAT‑GCCAGCCACGCCACGAATTTGCGGGTTAAA                                                   >  SRR4302540.6037959/1‑94 (MQ=60)

                                           CCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAAC                                                   >  SRR4302540.9402704/1‑94 (MQ=60)

                                           CCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAAC                                                   >  SRR4302540.6037958/1‑94 (MQ=60)

                                           CCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAAC                                                   <  SRR4302540.3133473/94‑1 (MQ=60)

                                            CATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACA                                                  >  SRR4302540.8760749/1‑94 (MQ=60)

                                             ATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAA                                                 >  SRR4302540.3502674/1‑94 (MQ=60)

                                             ATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAA                                                 >  SRR4302540.8421778/1‑94 (MQ=60)

                                             ATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAA                                                 >  SRR4302540.8711879/1‑94 (MQ=60)

                                             ATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAA                                                 >  SRR4302540.6671961/1‑94 (MQ=60)

                                             ATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAA                                                 >  SRR4302540.2547375/1‑94 (MQ=60)

                                             ATCATAATACTGCCGAATGCAGCGATCAGACAGGCAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGACTTTGCGGGTTGACAA                                                 >  SRR4302540.1770894/1‑94 (MQ=60)

                                              TCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAA                                                >  SRR4302540.3419966/1‑94 (MQ=60)

                                               CATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAA                                               <  SRR4302540.4343485/94‑1 (MQ=60)

                                                ATAATACTGCCGAATGCAGCTATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GTCAGCAACGCCAAGAATATGCGGGTTAACAAAAA                                              >  SRR4302540.9038381/1‑94 (MQ=60)

                                                ATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAA                                              >  SRR4302540.1691678/1‑94 (MQ=60)

                                                ATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAA                                              >  SRR4302540.6811033/1‑94 (MQ=60)

                                                 TAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAAC                                             >  SRR4302540.7409919/1‑94 (MQ=60)

                                                 TAATACTGCCGAATGCAGCGATCAGACAGGTAGGGACGAAGACGTCG‑CGGGTATCCAT‑GCCAGCAACGCCAGCAATTTGCGGGTTAACAAACAC                                             >  SRR4302540.694879/1‑94 (MQ=60)

                                                  AATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGGCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACG                                            >  SRR4302540.9339457/1‑94 (MQ=60)

                                                   ATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGA                                           >  SRR4302540.7623876/1‑94 (MQ=60)

                                                    TACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGAT                                          <  SRR4302540.7444727/94‑1 (MQ=60)

                                                     ACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATG                                         >  SRR4302540.5230852/1‑94 (MQ=60)

                                                      CTGCCGAATGCAGCGATCAGACCGGTAGTTACGAAGCCGTCG‑CTGGTATCCAT‑GCCAACAACGCCAAGAATTTGCGGGTTAACAAAAACGctga                                        >  SRR4302540.6552272/1‑90 (MQ=60)

                                                      CTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGT                                        <  SRR4302540.7484346/94‑1 (MQ=60)

                                                      CTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGG‑AACCATGGCCAGAAAGGCCAAAAATTTGCGGTTTAACAAAAACaagta                                        >  SRR4302540.6552273/1‑89 (MQ=44)

                                                       TGCCGAATGCAGCGGTCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTA                                       <  SRR4302540.3346967/94‑1 (MQ=60)

                                                       TGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAACAATTTGCGGGTTAACAAAAACGATGTA                                       >  SRR4302540.7825760/1‑94 (MQ=60)

                                                        GCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAA                                      >  SRR4302540.4573589/1‑94 (MQ=60)

                                                        GCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAA                                      >  SRR4302540.6280398/1‑94 (MQ=60)

                                                        GCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAA                                      >  SRR4302540.2251916/1‑94 (MQ=60)

                                                         CCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAA                                     >  SRR4302540.5651626/1‑94 (MQ=60)

                                                         CCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAA                                     >  SRR4302540.6304771/1‑94 (MQ=60)

                                                          CGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGTCGGTTAACACAAACGATGcacac                                    >  SRR4302540.1811997/1‑89 (MQ=60)

                                                          CGAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAAC                                    >  SRR4302540.1241799/1‑94 (MQ=60)

                                                           GAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACC                                   >  SRR4302540.727292/1‑94 (MQ=60)

                                                           GAATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACC                                   <  SRR4302540.8078350/94‑1 (MQ=60)

                                                           CAATGCAGCGATAAGACAGGTAGGGACGAAGCCGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACC                                   <  SRR4302540.8078628/94‑1 (MQ=60)

                                                            AATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCA                                  >  SRR4302540.4749139/1‑94 (MQ=60)

                                                             ATGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCAT                                 >  SRR4302540.8486881/1‑94 (MQ=60)

                                                              TGCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATC                                <  SRR4302540.8481552/94‑1 (MQ=60)

                                                               GCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTGACAAAAACGATGTAAACCATCT                               >  SRR4302540.7626434/1‑94 (MQ=60)

                                                               GCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACaagcg                               >  SRR4302540.7626433/1‑89 (MQ=60)

                                                               GCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCG                               <  SRR4302540.7504590/94‑1 (MQ=60)

                                                               GCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCG                               <  SRR4302540.1739388/94‑1 (MQ=60)

                                                               GCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCG                               >  SRR4302540.3219513/1‑94 (MQ=60)

                                                               GCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCG                               <  SRR4302540.6512832/94‑1 (MQ=60)

                                                               GCAGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCG                               <  SRR4302540.2596680/94‑1 (MQ=60)

                                                                 AGCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTC                             <  SRR4302540.5092971/94‑1 (MQ=60)

                                                                  GCGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCA                            <  SRR4302540.6003205/94‑1 (MQ=60)

                                                                   CGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAG                           <  SRR4302540.212043/94‑1 (MQ=60)

                                                                   CGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAG                           >  SRR4302540.13379/1‑94 (MQ=60)

                                                                   CGATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAG                           <  SRR4302540.4348251/94‑1 (MQ=60)

                                                                    GATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGG                          >  SRR4302540.4437180/1‑94 (MQ=60)

                                                                    GATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGG                          >  SRR4302540.4084946/1‑94 (MQ=60)

                                                                    GATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGG                          >  SRR4302540.7784080/1‑94 (MQ=60)

                                                                    GATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGG                          >  SRR4302540.6752700/1‑94 (MQ=60)

                                                                     ATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGCTGTAAACCATCGGCAGGA                         >  SRR4302540.2961760/1‑94 (MQ=60)

                                                                     ATCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGA                         >  SRR4302540.3961690/1‑94 (MQ=60)

                                                                     ATCAGACAGGCAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGA                         >  SRR4302540.333194/1‑94 (MQ=60)

                                                                     ATCAGACAGGAAGGGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGA                         >  SRR4302540.9493611/1‑94 (MQ=60)

                                                                      TCAGACAGGTAGTGGCGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAA                        <  SRR4302540.3219378/94‑1 (MQ=60)

                                                                      TCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAA                        <  SRR4302540.1532548/94‑1 (MQ=60)

                                                                      TCAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGAAA                        <  SRR4302540.6485990/94‑1 (MQ=60)

                                                                       CAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAG                       <  SRR4302540.4751907/94‑1 (MQ=60)

                                                                       CAGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTAAGGAAG                       >  SRR4302540.1994842/1‑94 (MQ=60)

                                                                       CAGACAGGGAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGAAAG                       >  SRR4302540.1325063/1‑94 (MQ=60)

                                                                        AGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGG                      <  SRR4302540.7818037/94‑1 (MQ=60)

                                                                        AGACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAACAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGG                      >  SRR4302540.3699861/1‑94 (MQ=60)

                                                                          ACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTG                    >  SRR4302540.2974388/1‑94 (MQ=60)

                                                                          ACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTG                    >  SRR4302540.8787987/1‑94 (MQ=60)

                                                                          ACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTG                    <  SRR4302540.2342347/94‑1 (MQ=60)

                                                                          ACAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTG                    <  SRR4302540.1345886/94‑1 (MQ=60)

                                                                           CAGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGG                   <  SRR4302540.3689301/94‑1 (MQ=60)

                                                                            AGGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGT                  >  SRR4302540.9002937/1‑94 (MQ=60)

                                                                             GGTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTA                 >  SRR4302540.6422320/1‑94 (MQ=60)

                                                                              GTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAA                <  SRR4302540.811111/94‑1 (MQ=60)

                                                                              GTAGTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAA                <  SRR4302540.7248818/94‑1 (MQ=60)

                                                                                 GTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAAC             <  SRR4302540.10090074/94‑1 (MQ=60)

                                                                                 GTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAAC             <  SRR4302540.6227883/94‑1 (MQ=60)

                                                                                 GTGACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGAAAGGTGGTAAAAC             >  SRR4302540.4381515/1‑94 (MQ=60)

                                                                                   GACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCG           >  SRR4302540.6385399/1‑94 (MQ=60)

                                                                                   GACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGAAAGGTGGTAAAACCG           >  SRR4302540.5791772/1‑94 (MQ=60)

                                                                                    ACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGAAAGGTGGTAAAACCGG          <  SRR4302540.8213098/94‑1 (MQ=60)

                                                                                    ACGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGAAAGGTGGTAAAACCGG          <  SRR4302540.7801327/94‑1 (MQ=60)

                                                                                     CGAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGC         >  SRR4302540.7115512/1‑94 (MQ=60)

                                                                                      GAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCG        >  SRR4302540.6285389/1‑94 (MQ=60)

                                                                                      GAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCG        >  SRR4302540.1018334/1‑94 (MQ=60)

                                                                                      GAAGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCG        <  SRR4302540.3216794/94‑1 (MQ=60)

                                                                                        AGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGAT      >  SRR4302540.8567531/1‑94 (MQ=60)

                                                                                        AGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGAT      <  SRR4302540.4354417/94‑1 (MQ=60)

                                                                                        AGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGAT      >  SRR4302540.9721858/1‑94 (MQ=60)

                                                                                        AGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGAT      <  SRR4302540.4101241/94‑1 (MQ=60)

                                                                                        AGACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGAT      <  SRR4302540.2205143/94‑1 (MQ=60)

                                                                                         GACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATC     >  SRR4302540.7358659/1‑94 (MQ=60)

                                                                                         GACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATC     >  SRR4302540.6596360/1‑94 (MQ=60)

                                                                                         GACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACAATCGTCAGGAAGGTGGTAAAACCGGCGATC     >  SRR4302540.2049711/1‑94 (MQ=60)

                                                                                          ACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATCA    >  SRR4302540.987819/1‑94 (MQ=60)

                                                                                          ACGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGAAAGGTGGTAAAACCGGCGATCA    >  SRR4302540.10104278/1‑94 (MQ=60)

                                                                                           NGNCN‑CNNGNATCCAT‑GCCAGNNACGCCAAGAATTTGCGGGTTAACAAAAANGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATCAC   <  SRR4302540.6904842/94‑1 (MQ=60)

                                                                                           CGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATCAC   >  SRR4302540.3947449/1‑94 (MQ=60)

                                                                                           CGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATCAC   <  SRR4302540.3911855/94‑1 (MQ=60)

                                                                                           CGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATCAC   <  SRR4302540.4216214/94‑1 (MQ=60)

                                                                                           CGTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATCAC   <  SRR4302540.890436/94‑1 (MQ=60)

                                                                                            GTCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATCACT  <  SRR4302540.2246892/94‑1 (MQ=60)

CCCATAGCGGGTGCCAGTGCAACTGGCAGGTTAGCAAACAGTCCCATCATAATACTGCCGAATGCAGCGATCAGACAGGTAGTGACGAAGACGGCG‑CTGGTATCCAT‑GCCAGCAACGCCAAGAATTTGCGGGTTAACAAAAACGATGTAAACCATCGTCAGGAAGGTGGTAAAACCGGCGATCACT  >  NC_000913/3893961‑3894146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`