Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,916,382 A→G V368V (GTT→GTC)  atpA ← membrane‑bound ATP synthase, F1 sector, alpha‑subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,916,3820AG99.6% 1550.5 / ‑3.7 486V368V (GTT→GTC) atpAmembrane‑bound ATP synthase, F1 sector, alpha‑subunit
Reads supporting (aligned to +/- strand):  ref base A (0/2);  new base G (228/256);  total (228/258)
Fisher's exact test for biased strand distribution p-value = 5.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.92e-01

Only 100 of 504 total aligned reads displayed.

TGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGC  >  NC_000913/3916292‑3916471
                                                                                          |                                                                                         
tgCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGAc                                                                                         <  1:3895852/93‑1 (MQ=255)
   cAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACTCGGGTTGACCGc                                                                                      >  2:1666949/1‑93 (MQ=255)
   cAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGAccac                                                                                      >  1:4284457/1‑91 (MQ=255)
    agagCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCa                                                                                     >  1:934258/1‑93 (MQ=255)
    agagCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCa                                                                                     <  1:732462/93‑1 (MQ=255)
       gCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGa                                                                                  >  1:6808955/1‑93 (MQ=255)
         ggTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACg                                                                                <  2:2846569/93‑1 (MQ=255)
          gTACGGATACCACCTGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGa                                                                               <  2:7713663/93‑1 (MQ=255)
          gTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGa                                                                               >  2:7794887/1‑93 (MQ=255)
           tACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGaa                                                                              <  2:9636440/93‑1 (MQ=255)
           tACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGaa                                                                              >  1:6688454/1‑93 (MQ=255)
              ggATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATAc                                                                           >  1:8342068/1‑93 (MQ=255)
               gATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATAcc                                                                          >  1:1650959/1‑93 (MQ=255)
               gATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATAcc                                                                          <  1:700039/93‑1 (MQ=255)
               gATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATAcc                                                                          <  2:5885971/93‑1 (MQ=255)
                aTACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCg                                                                         >  1:8566658/1‑93 (MQ=255)
                aTACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCg                                                                         <  1:2636187/93‑1 (MQ=255)
                aTACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCg                                                                         >  2:8583660/1‑93 (MQ=255)
                aTACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCg                                                                         <  2:729706/93‑1 (MQ=255)
                 tACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCgg                                                                        <  1:9659033/93‑1 (MQ=255)
                 tACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCgg                                                                        <  2:5665351/93‑1 (MQ=255)
                   ccaccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCg                                                                      <  1:3415890/93‑1 (MQ=255)
                    caccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGt                                                                     <  2:8160326/93‑1 (MQ=255)
                    caccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGt                                                                     >  1:4645384/1‑93 (MQ=255)
                     accGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGtt                                                                    >  1:8821911/1‑93 (MQ=255)
                      ccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGATATACTCGGGTTTACCGCAGGACGAATACCGGCGTTg                                                                   >  2:9024957/1‑93 (MQ=255)
                      ccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTg                                                                   >  1:452622/1‑93 (MQ=255)
                         gACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAc                                                                <  2:3858625/93‑1 (MQ=255)
                         gACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAc                                                                >  2:2007624/1‑93 (MQ=255)
                         gACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAc                                                                >  1:5645794/1‑93 (MQ=255)
                         gACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAc                                                                >  1:6624271/1‑93 (MQ=255)
                          aCAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACa                                                               <  1:6323631/93‑1 (MQ=255)
                           cAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAg                                                              >  2:4475109/1‑93 (MQ=255)
                           cAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAg                                                              <  2:942774/93‑1 (MQ=255)
                           cAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAg                                                              >  1:3514957/1‑93 (MQ=255)
                            aGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAgg                                                             <  1:2383710/93‑1 (MQ=255)
                             gTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggt                                                            <  2:5025172/93‑1 (MQ=255)
                             gTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggt                                                            <  2:3158487/93‑1 (MQ=255)
                             gTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGAAGGACGAATACCGGAGTTGACCAggt                                                            >  1:7496674/1‑93 (MQ=255)
                              ttttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggtt                                                           <  1:9865946/93‑1 (MQ=255)
                              ttttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggtt                                                           <  1:1312932/93‑1 (MQ=255)
                              ttttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggtt                                                           <  1:3757208/93‑1 (MQ=255)
                               tttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACCggttg                                                          >  1:2861827/1‑93 (MQ=255)
                                ttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggttgg                                                         >  2:5232104/1‑93 (MQ=255)
                                 tttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggttggt                                                        <  1:5220968/93‑1 (MQ=255)
                                 tttCATGATATTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggttggt                                                        <  2:1837242/93‑1 (MQ=255)
                                   tCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATGCCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGttt                                                      <  2:3707062/93‑1 (MQ=255)
                                   tCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGttt                                                      <  1:6165297/93‑1 (MQ=255)
                                    cATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTc                                                     <  2:8020010/93‑1 (MQ=255)
                                     aTGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTcc                                                    <  2:1485342/93‑1 (MQ=255)
                                       gATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAg                                                  >  2:2346662/1‑93 (MQ=255)
                                       gATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAg                                                  <  2:3980238/93‑1 (MQ=255)
                                        aTCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAgg                                                 >  1:1160160/1‑93 (MQ=255)
                                          cTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGaa                                               >  1:5480766/1‑93 (MQ=255)
                                          cTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGaa                                               <  2:2939396/93‑1 (MQ=255)
                                           ttGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAg                                              >  1:1976847/1‑93 (MQ=255)
                                            tGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGa                                             <  2:10002655/93‑1 (MQ=255)
                                             ggTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCTGGTTGACCGCAGGACGAATACCGTCGTTGAACAGGTTGGTTTCCAGGAAGAt                                            <  2:9785587/93‑1 (MQ=255)
                                             ggTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGAt                                            <  1:756450/93‑1 (MQ=255)
                                              gTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATc                                           <  1:9764484/93‑1 (MQ=255)
                                              gTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATc                                           <  1:9457191/93‑1 (MQ=255)
                                                cTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTg                                         <  2:7542843/93‑1 (MQ=255)
                                                 tgtgCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTgc                                        >  1:7847551/1‑92 (MQ=255)
                                                 tgtgCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGa                                        >  2:6231631/1‑93 (MQ=255)
                                                    gctgcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCa                                     <  1:2330198/93‑1 (MQ=255)
                                                      tgcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATc                                   >  2:6172349/1‑93 (MQ=255)
                                                      tgcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACAGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATc                                   >  1:8061570/1‑93 (MQ=255)
                                                       gcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCg                                  <  1:8387647/93‑1 (MQ=255)
                                                        caccacCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCgg                                 >  2:4629198/1‑93 (MQ=255)
                                                         accaccAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCTGt                                >  2:5446108/1‑93 (MQ=255)
                                                          ccaccaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTa                               >  1:8943475/1‑93 (MQ=255)
                                                          ccaccaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTa                               <  1:7122661/93‑1 (MQ=255)
                                                           caccaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTaa                              <  2:8870339/93‑1 (MQ=255)
                                                           caccaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTaa                              <  2:4812409/93‑1 (MQ=255)
                                                            accaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAt                             <  1:6448547/93‑1 (MQ=255)
                                                                 cacGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGgaga                        >  2:4318482/1‑93 (MQ=255)
                                                                  acGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGAt                       <  2:5978414/93‑1 (MQ=255)
                                                                    gggATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTAGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTa                     >  1:601178/1‑93 (MQ=255)
                                                                     ggATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTAc                    >  2:6744195/1‑93 (MQ=255)
                                                                       aTACGGAAATCCCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGt                  <  1:5277576/93‑1 (MQ=255)
                                                                       aTACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGt                  <  2:3073692/93‑1 (MQ=255)
                                                                        tACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGtt                 >  1:3140558/1‑93 (MQ=255)
                                                                         aCGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTg                <  2:2554370/93‑1 (MQ=255)
                                                                          cGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTgg               >  2:7179746/1‑93 (MQ=255)
                                                                           ggAAATACCCGGGTTGACCGCAGGACGAATACCGGGGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGt              >  1:1798654/1‑93 (MQ=255)
                                                                           ggAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGt              <  2:4110076/93‑1 (MQ=255)
                                                                            gAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTc             <  2:6547368/93‑1 (MQ=255)
                                                                            gAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTc             >  1:793429/1‑93 (MQ=255)
                                                                            gAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTc             <  2:3574278/93‑1 (MQ=255)
                                                                              aaTACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCgg           <  2:2179133/93‑1 (MQ=255)
                                                                               aTACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGga          >  1:1003940/1‑93 (MQ=255)
                                                                                  cccGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaacg       <  1:4864059/93‑1 (MQ=255)
                                                                                  cccGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaacg       >  1:9051024/1‑93 (MQ=255)
                                                                                   ccGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaacga      >  2:7009023/1‑93 (MQ=255)
                                                                                    cGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaacgaa     >  2:83669/1‑93 (MQ=255)
                                                                                    cGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaacgaa     >  2:3292495/1‑93 (MQ=255)
                                                                                     gggTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGGAATGGAGATTACGTTGGTCGgaacgaac    >  1:2161705/1‑93 (MQ=255)
                                                                                      ggTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGaacgaacg   >  2:7417402/1‑93 (MQ=255)
                                                                                       gTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGc  >  1:5008229/1‑93 (MQ=255)
                                                                                       gTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGc  <  2:1310707/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGC  >  NC_000913/3916292‑3916471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 275 total aligned reads displayed.
CTGTGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAA  >  NC_000913/3916289‑3916475
                                                                                             |                                                                                             
 TGTGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGA                                                                                              >  SRR4302540.3379362/1‑94 (MQ=60)
  GTGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGAC                                                                                             <  SRR4302540.1673650/94‑1 (MQ=60)
  GGGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCGTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGAC                                                                                             <  SRR4302540.6185215/94‑1 (MQ=60)
   TGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACC                                                                                            >  SRR4302540.1549653/1‑94 (MQ=60)
    GCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCG                                                                                           >  SRR4302540.9355242/1‑94 (MQ=60)
     CCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGC                                                                                          >  SRR4302540.6715261/1‑94 (MQ=60)
     CCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGC                                                                                          >  SRR4302540.6715262/1‑94 (MQ=60)
     CCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCAC                                                                                          >  SRR4302540.4331060/1‑94 (MQ=60)
      CAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCA                                                                                         >  SRR4302540.8452911/1‑94 (MQ=60)
      CAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCA                                                                                         >  SRR4302540.944055/1‑94 (MQ=60)
      CAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCA                                                                                         <  SRR4302540.7333462/94‑1 (MQ=60)
       CGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAG                                                                                        <  SRR4302540.7811267/94‑1 (MQ=60)
       AGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAG                                                                                        <  SRR4302540.614286/94‑1 (MQ=60)
       AGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAG                                                                                        <  SRR4302540.740297/94‑1 (MQ=60)
         AGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGA                                                                                      <  SRR4302540.3473110/94‑1 (MQ=60)
         AGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGA                                                                                      <  SRR4302540.4731704/94‑1 (MQ=60)
         AGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGA                                                                                      >  SRR4302540.6884301/1‑94 (MQ=60)
         AGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGA                                                                                      >  SRR4302540.2078941/1‑94 (MQ=60)
          GCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGAC                                                                                     <  SRR4302540.680581/94‑1 (MQ=60)
          GCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGAC                                                                                     <  SRR4302540.5075993/94‑1 (MQ=60)
           CGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACG                                                                                    <  SRR4302540.9471210/94‑1 (MQ=60)
            GGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGA                                                                                   >  SRR4302540.5278799/1‑94 (MQ=60)
            GGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGA                                                                                   >  SRR4302540.6118339/1‑94 (MQ=60)
            GGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGGCTGTGCTGCACCACAAACACGGGATACGGAAATACCCGGGTCGACCGCAGGACGA                                                                                   >  SRR4302540.8503132/1‑94 (MQ=60)
             GTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAA                                                                                  >  SRR4302540.625311/1‑94 (MQ=60)
             GTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAA                                                                                  >  SRR4302540.6762302/1‑94 (MQ=60)
             GTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAA                                                                                  <  SRR4302540.7537645/94‑1 (MQ=60)
              TACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAT                                                                                 >  SRR4302540.8683623/1‑94 (MQ=60)
              TACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAT                                                                                 >  SRR4302540.1964289/1‑94 (MQ=60)
                 GGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACC                                                                              <  SRR4302540.7756520/94‑1 (MQ=60)
                 GGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACC                                                                              <  SRR4302540.622434/94‑1 (MQ=60)
                  GATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCG                                                                             >  SRR4302540.9885056/1‑94 (MQ=60)
                  GATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCG                                                                             <  SRR4302540.2627160/94‑1 (MQ=60)
                  GATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCG                                                                             <  SRR4302540.707554/94‑1 (MQ=60)
                   ATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGG                                                                            <  SRR4302540.2664728/94‑1 (MQ=60)
                    TACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGC                                                                           <  SRR4302540.9772733/94‑1 (MQ=60)
                     ACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACTAACACGGGATAAGGAACTATCCGGGTTGACCGCAGtaggaataagtgcg                                                                          >  SRR4302540.10008458/1‑80 (MQ=60)
                      CCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGT                                                                         >  SRR4302540.2379472/1‑94 (MQ=60)
                      CCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGT                                                                         >  SRR4302540.1278482/1‑94 (MQ=60)
                      CCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGT                                                                         >  SRR4302540.4695108/1‑94 (MQ=60)
                       CACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTT                                                                        >  SRR4302540.4767622/1‑94 (MQ=60)
                       CACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTT                                                                        >  SRR4302540.8923919/1‑94 (MQ=60)
                       CACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTT                                                                        <  SRR4302540.2232487/94‑1 (MQ=60)
                       CACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTT                                                                        >  SRR4302540.8923918/1‑94 (MQ=60)
                        ACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTG                                                                       >  SRR4302540.2844189/1‑94 (MQ=60)
                         CCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGA                                                                      >  SRR4302540.6306747/1‑94 (MQ=60)
                         CCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGA                                                                      >  SRR4302540.844003/1‑94 (MQ=60)
                          CGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAA                                                                     >  SRR4302540.2078568/1‑94 (MQ=60)
                          CGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAA                                                                     >  SRR4302540.3593006/1‑94 (MQ=60)
                           GGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAC                                                                    >  SRR4302540.6675451/1‑94 (MQ=60)
                           GGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAC                                                                    <  SRR4302540.7983692/94‑1 (MQ=60)
                           GGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAC                                                                    >  SRR4302540.5707930/1‑94 (MQ=60)
                             ACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAG                                                                  >  SRR4302540.4626243/1‑94 (MQ=60)
                             ACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAG                                                                  >  SRR4302540.3780965/1‑94 (MQ=60)
                             ACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAG                                                                  >  SRR4302540.4358190/1‑94 (MQ=60)
                             ACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAG                                                                  >  SRR4302540.3553250/1‑94 (MQ=60)
                             ACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAG                                                                  <  SRR4302540.3194937/94‑1 (MQ=60)
                             ACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAG                                                                  <  SRR4302540.6394055/94‑1 (MQ=60)
                             ACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAG                                                                  >  SRR4302540.5703377/1‑94 (MQ=60)
                              GAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGG                                                                 <  SRR4302540.6650843/94‑1 (MQ=60)
                              CAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATCCCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGG                                                                 <  SRR4302540.7110678/94‑1 (MQ=60)
                              CAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGG                                                                 >  SRR4302540.9480501/1‑94 (MQ=60)
                               AGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGT                                                                >  SRR4302540.1102640/1‑94 (MQ=60)
                               AGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGT                                                                >  SRR4302540.3830920/1‑94 (MQ=60)
                               AGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGT                                                                >  SRR4302540.10010973/1‑94 (MQ=60)
                               AGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGAAGGACGAATACCGGAGTTGACCAGGT                                                                >  SRR4302540.7580418/1‑94 (MQ=60)
                                GTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTT                                                               >  SRR4302540.3995447/1‑94 (MQ=60)
                                GTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTT                                                               <  SRR4302540.7614591/94‑1 (MQ=60)
                                GTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTT                                                               <  SRR4302540.9021345/94‑1 (MQ=60)
                                 TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACCGGTTG                                                              >  SRR4302540.2892856/1‑94 (MQ=60)
                                 TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTG                                                              <  SRR4302540.3798192/94‑1 (MQ=60)
                                 TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTG                                                              <  SRR4302540.9863191/94‑1 (MQ=60)
                                 TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTG                                                              <  SRR4302540.8441352/94‑1 (MQ=60)
                                 TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTG                                                              <  SRR4302540.3667033/94‑1 (MQ=60)
                                 TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTG                                                              <  SRR4302540.3841720/94‑1 (MQ=60)
                                 TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTG                                                              <  SRR4302540.1326578/94‑1 (MQ=60)
                                 TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTG                                                              <  SRR4302540.7117410/94‑1 (MQ=60)
                                 TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTG                                                              >  SRR4302540.8256693/1‑94 (MQ=60)
                                  TTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGG                                                             >  SRR4302540.7452024/1‑94 (MQ=60)
                                  TTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGG                                                             <  SRR4302540.9551748/94‑1 (MQ=60)
                                   TTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGT                                                            <  SRR4302540.9653264/94‑1 (MQ=60)
                                    TTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTT                                                           <  SRR4302540.7666464/94‑1 (MQ=60)
                                     TTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTT                                                          >  SRR4302540.5741335/1‑94 (MQ=60)
                                      TCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTC                                                         <  SRR4302540.6233996/94‑1 (MQ=60)
                                       CATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCC                                                        <  SRR4302540.5909901/94‑1 (MQ=60)
                                       CATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCC                                                        <  SRR4302540.4644679/94‑1 (MQ=60)
                                         TGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAG                                                      >  SRR4302540.7645472/1‑94 (MQ=60)
                                         TGATCTTGGTCTGGGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATCCTGTCGTTAAACAGGTTGGTTTCCAG                                                      >  SRR4302540.7645473/1‑94 (MQ=60)
                                          GATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGG                                                     <  SRR4302540.6770260/94‑1 (MQ=60)
                                          GATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGG                                                     >  SRR4302540.3438227/1‑94 (MQ=60)
                                          GATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGG                                                     >  SRR4302540.1172218/1‑94 (MQ=60)
                                          GATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGG                                                     >  SRR4302540.2597378/1‑94 (MQ=60)
                                          GATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGA                                                     >  SRR4302540.8612771/1‑94 (MQ=60)
                                            TCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAA                                                   >  SRR4302540.5541097/1‑94 (MQ=60)
                                             CTTGGTCTGTGCTGCACCACCCACCCGGGCTACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAG                                                  <  SRR4302540.3531526/94‑1 (MQ=60)
                                             CTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAG                                                  >  SRR4302540.4957997/1‑94 (MQ=60)
                                             CTTGGTCTGTGCTGCACCACCAACACGGGATAAGGAAATACCCGGGTTGACCTCAGGAAGAATACCGGCGTTGCACAGGTTGGTTTCCAGGAGG                                                  >  SRR4302540.4957996/1‑94 (MQ=60)
                                              TTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGA                                                 <  SRR4302540.4479616/94‑1 (MQ=60)
                                               TGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGAT                                                <  SRR4302540.9155830/94‑1 (MQ=60)
                                                GGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC                                               >  SRR4302540.8057430/1‑94 (MQ=60)
                                                GGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC                                               >  SRR4302540.9961799/1‑94 (MQ=60)
                                                GGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC                                               >  SRR4302540.7342950/1‑94 (MQ=60)
                                                GGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC                                               >  SRR4302540.9961800/1‑94 (MQ=60)
                                                GGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC                                               <  SRR4302540.1056321/94‑1 (MQ=60)
                                                 GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT                                              <  SRR4302540.1275740/94‑1 (MQ=60)
                                                 GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT                                              <  SRR4302540.6975903/94‑1 (MQ=60)
                                                 GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT                                              <  SRR4302540.6975636/94‑1 (MQ=60)
                                                 GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT                                              <  SRR4302540.1783779/94‑1 (MQ=60)
                                                 GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT                                              >  SRR4302540.740390/1‑94 (MQ=60)
                                                 GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT                                              <  SRR4302540.2304978/94‑1 (MQ=60)
                                                 GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT                                              <  SRR4302540.9569416/94‑1 (MQ=60)
                                                 GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT                                              <  SRR4302540.1089446/94‑1 (MQ=60)
                                                 GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT                                              <  SRR4302540.9878997/94‑1 (MQ=60)
                                                  TCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTG                                             >  SRR4302540.6518338/1‑94 (MQ=60)
                                                  TCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTG                                             >  SRR4302540.1560819/1‑94 (MQ=60)
                                                  TCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTG                                             >  SRR4302540.5293424/1‑94 (MQ=60)
                                                  TCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTG                                             >  SRR4302540.1325363/1‑94 (MQ=60)
                                                  TCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTG                                             >  SRR4302540.3881518/1‑94 (MQ=60)
                                                   CTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGC                                            >  SRR4302540.7939249/1‑94 (MQ=60)
                                                   CTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGA                                            >  SRR4302540.2389140/1‑94 (MQ=60)
                                                    TGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGAC                                           <  SRR4302540.6516867/94‑1 (MQ=60)
                                                    TGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGAC                                           >  SRR4302540.9782036/1‑94 (MQ=60)
                                                     GTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGATGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACC                                          <  SRR4302540.5769050/94‑1 (MQ=60)
                                                      TGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCA                                         <  SRR4302540.5051705/94‑1 (MQ=60)
                                                       GCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCAT                                        <  SRR4302540.2355303/94‑1 (MQ=60)
                                                       GCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCAT                                        <  SRR4302540.3075483/94‑1 (MQ=60)
                                                       GCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCAT                                        >  SRR4302540.8149656/1‑94 (MQ=60)
                                                        CTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATC                                       <  SRR4302540.4904600/94‑1 (MQ=60)
                                                        CTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATC                                       <  SRR4302540.10068997/94‑1 (MQ=60)
                                                        CTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACAGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATC                                       >  SRR4302540.8155147/1‑94 (MQ=60)
                                                        CTCCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATC                                       <  SRR4302540.7282972/94‑1 (MQ=60)
                                                         TGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGCAGATCTGACCATCG                                      >  SRR4302540.8615739/1‑94 (MQ=60)
                                                          GCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGG                                     <  SRR4302540.1415955/94‑1 (MQ=60)
                                                          GCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGG                                     <  SRR4302540.8484966/94‑1 (MQ=60)
                                                           CACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGT                                    >  SRR4302540.6386739/1‑94 (MQ=60)
                                                           CACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGT                                    <  SRR4302540.3054530/94‑1 (MQ=60)
                                                           CACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGA                                    >  SRR4302540.8489292/1‑94 (MQ=60)
                                                            ACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTA                                   >  SRR4302540.512659/1‑94 (MQ=60)
                                                            ACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTA                                   >  SRR4302540.9048565/1‑94 (MQ=60)
                                                            ACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTA                                   <  SRR4302540.3362764/94‑1 (MQ=60)
                                                             CCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAA                                  >  SRR4302540.3955700/1‑94 (MQ=60)
                                                             CCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAA                                  <  SRR4302540.7201973/94‑1 (MQ=60)
                                                             CCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAA                                  >  SRR4302540.531929/1‑94 (MQ=60)
                                                             CCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAA                                  <  SRR4302540.9122009/94‑1 (MQ=60)
                                                             CCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAA                                  <  SRR4302540.260861/94‑1 (MQ=60)
                                                              CACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAT                                 <  SRR4302540.5417382/94‑1 (MQ=60)
                                                              CACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAT                                 >  SRR4302540.8688616/1‑94 (MQ=60)
                                                               ACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATG                                <  SRR4302540.6520329/94‑1 (MQ=60)
                                                               ACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATG                                <  SRR4302540.3073050/94‑1 (MQ=60)
                                                               ACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATG                                <  SRR4302540.524719/94‑1 (MQ=60)
                                                                  AACACGTGATACGGAAATGCCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGTCCATCGGTAATGGAG                             <  SRR4302540.83916/94‑1 (MQ=60)
                                                                  AACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGGG                             >  SRR4302540.8756567/1‑94 (MQ=60)
                                                                  AACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAG                             >  SRR4302540.2679920/1‑94 (MQ=60)
                                                                    CACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGAT                           >  SRR4302540.418694/1‑94 (MQ=60)
                                                                     ACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATT                          <  SRR4302540.7633868/94‑1 (MQ=60)
                                                                        GGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACG                       <  SRR4302540.6832046/94‑1 (MQ=60)
                                                                          ATACGGAAATCCCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTT                     <  SRR4302540.5335206/94‑1 (MQ=60)
                                                                          ATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTT                     >  SRR4302540.9638524/1‑94 (MQ=60)
                                                                          ATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTT                     >  SRR4302540.3174803/1‑94 (MQ=60)
                                                                           TACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTG                    <  SRR4302540.2395945/94‑1 (MQ=60)
                                                                           TACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTG                    >  SRR4302540.7196324/1‑94 (MQ=60)
                                                                           TACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTG                    <  SRR4302540.21487/94‑1 (MQ=60)
                                                                            ACGGAAATACCCGGGTTGACCGCAGGACGAATTCCGGCGTTGAGCAGGTTGGTTTCCAGGAAGATCTGCCCATCGGTAATGGAGATTACGTTGG                   <  SRR4302540.993482/94‑1 (MQ=60)
                                                                            ACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGG                   <  SRR4302540.9653461/94‑1 (MQ=60)
                                                                            ACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGG                   <  SRR4302540.5722587/94‑1 (MQ=60)
                                                                            ACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGG                   <  SRR4302540.1805371/94‑1 (MQ=60)
                                                                            ACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGG                   <  SRR4302540.8331237/94‑1 (MQ=60)
                                                                             CGGAAATACCCGGGTTGACCGCAGGACGAATACCGGGGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGT                  >  SRR4302540.1818229/1‑94 (MQ=60)
                                                                             CGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGT                  <  SRR4302540.6653358/94‑1 (MQ=60)
                                                                              GGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTC                 >  SRR4302540.1744889/1‑94 (MQ=60)
                                                                              GGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTC                 >  SRR4302540.6749088/1‑94 (MQ=60)
                                                                              GGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTC                 >  SRR4302540.1883628/1‑94 (MQ=60)
                                                                              GGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTC                 >  SRR4302540.801853/1‑94 (MQ=60)
                                                                              GGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTC                 <  SRR4302540.2271405/94‑1 (MQ=60)
                                                                               GAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCG                <  SRR4302540.939260/94‑1 (MQ=60)
                                                                               GAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCG                >  SRR4302540.550756/1‑94 (MQ=60)
                                                                               GAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCG                <  SRR4302540.2805322/94‑1 (MQ=60)
                                                                               GAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGACTACGTTGGTCG                <  SRR4302540.9108936/94‑1 (MQ=60)
                                                                                AAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGG               <  SRR4302540.7517118/94‑1 (MQ=60)
                                                                                 AATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGA              >  SRR4302540.1014130/1‑94 (MQ=60)
                                                                                  ATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAA             >  SRR4302540.7967850/1‑94 (MQ=60)
                                                                                   TACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAAC            <  SRR4302540.4555298/94‑1 (MQ=60)
                                                                                   TACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAAC            <  SRR4302540.4638839/94‑1 (MQ=60)
                                                                                   TACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAAC            <  SRR4302540.5673011/94‑1 (MQ=60)
                                                                                   TACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAAC            <  SRR4302540.5397936/94‑1 (MQ=60)
                                                                                    ACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACG           >  SRR4302540.9159676/1‑94 (MQ=60)
                                                                                    ACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAAGGAGATTACGTTGGTCGGAACG           <  SRR4302540.4369593/94‑1 (MQ=60)
                                                                                      CCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAA         <  SRR4302540.8075208/94‑1 (MQ=60)
                                                                                       CGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAAC        >  SRR4302540.3509924/1‑94 (MQ=60)
                                                                                       CGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAAC        <  SRR4302540.1933294/94‑1 (MQ=60)
                                                                                       CGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGGAATGGAGATTACGTTGGTCGGAACGAAC        >  SRR4302540.2184988/1‑94 (MQ=60)
                                                                                       CGGGTCGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAAC        <  SRR4302540.10029719/94‑1 (MQ=60)
                                                                                         GGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGC      >  SRR4302540.5062464/1‑94 (MQ=60)
                                                                                           TTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAG    >  SRR4302540.6198542/1‑94 (MQ=60)
                                                                                            TGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGA   <  SRR4302540.932626/94‑1 (MQ=60)
                                                                                             GACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAA  >  SRR4302540.52477/1‑94 (MQ=60)
                                                                                             GACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAA  >  SRR4302540.4605317/1‑94 (MQ=60)
                                                                                             GACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAA  <  SRR4302540.903338/94‑1 (MQ=60)
                                                                                             GACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAA  >  SRR4302540.893863/1‑94 (MQ=60)
                                                                                             GACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAA  <  SRR4302540.5800555/94‑1 (MQ=60)
                                                                                             |                                                                                             
CTGTGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAA  >  NC_000913/3916289‑3916475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑