Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,916,382 |
A→G |
V368V (GTT→GTC) |
atpA ← |
membrane‑bound ATP synthase, F1 sector, alpha‑subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,916,382 | 0 | A | G | 100.0%
| 906.0
/ NA
| 282 | V368V (GTT→GTC) | atpA | membrane‑bound ATP synthase, F1 sector, alpha‑subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (136/146); total (136/146) |
Only 100 of 286 total aligned reads displayed.
TGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGC > NC_000913/3916292‑3916471
|
tgCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATCCCCGGGTTGAc < 1:1500109/93‑1 (MQ=255)
tgCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGAc > 1:2651526/1‑93 (MQ=255)
tgCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGAc < 1:990383/93‑1 (MQ=255)
agagCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCa > 2:3535722/1‑93 (MQ=255)
agagCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCa > 2:2809788/1‑93 (MQ=255)
gagCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAg > 2:2104118/1‑93 (MQ=255)
gCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAggc > 2:2885631/1‑92 (MQ=255)
gCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGa < 2:2052221/93‑1 (MQ=255)
gCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGa < 2:6276673/93‑1 (MQ=255)
cGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCCCCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGAc < 2:4375339/93‑1 (MQ=255)
ggTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGCTACGGAAATACCCGGGTTGACCGCAGGACg > 1:1729414/1‑93 (MQ=255)
gTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGa < 1:3122273/93‑1 (MQ=255)
tACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGaa < 2:1405982/93‑1 (MQ=255)
aCGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAt > 1:133066/1‑93 (MQ=255)
aCGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAt < 1:4844604/93‑1 (MQ=255)
aCGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAt < 1:3859195/93‑1 (MQ=255)
aCGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAt > 1:3043074/1‑93 (MQ=255)
ggATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATAc < 1:1768931/93‑1 (MQ=255)
gATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATAcc > 2:4010367/1‑93 (MQ=255)
gATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATAcc < 2:4989502/93‑1 (MQ=255)
gATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATAcc < 1:4388872/93‑1 (MQ=255)
ccaccGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCg < 1:5604775/93‑1 (MQ=255)
caccGGACAGTTTTTTCACGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGt > 1:1346776/1‑93 (MQ=255)
accGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGtt > 1:5173959/1‑93 (MQ=255)
cGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGa > 1:6293214/1‑93 (MQ=255)
ggACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGaa > 2:5133904/1‑93 (MQ=255)
ggACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGaa > 1:2534525/1‑93 (MQ=255)
gACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAc > 2:38327/1‑93 (MQ=255)
gACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCAGGTTGAACGCAGGACGAATACCGACGTTGaaa > 2:696477/1‑92 (MQ=255)
aCAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACa > 2:6184767/1‑93 (MQ=255)
aCAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACa > 2:5750780/1‑93 (MQ=255)
cAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAg < 1:3373695/93‑1 (MQ=255)
gTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggt > 2:5949265/1‑93 (MQ=255)
gTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggt > 1:396334/1‑93 (MQ=255)
ttttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggtt < 2:5486820/93‑1 (MQ=255)
ttttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggtt < 2:4725864/93‑1 (MQ=255)
tttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggttg < 1:961770/93‑1 (MQ=255)
ttttCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAggttgg > 1:5446119/1‑93 (MQ=255)
cATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTc > 1:1429822/1‑93 (MQ=255)
cATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTc > 2:3716242/1‑93 (MQ=255)
cATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTc > 1:6013037/1‑93 (MQ=255)
aTGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTcc < 2:1334048/93‑1 (MQ=255)
aTGATCTTGGTCTGTGCTCCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTcc < 2:3676032/93‑1 (MQ=255)
tGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCa < 2:1499360/93‑1 (MQ=255)
tGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCa > 2:2428760/1‑93 (MQ=255)
gATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAg < 2:5370480/93‑1 (MQ=255)
gATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAg > 1:259985/1‑93 (MQ=255)
tCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGa > 2:5337723/1‑93 (MQ=255)
tGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGa < 1:1026659/93‑1 (MQ=255)
tGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGa > 2:3998441/1‑93 (MQ=255)
ggTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGAt < 2:4147364/93‑1 (MQ=255)
gTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATc < 2:6018929/93‑1 (MQ=255)
gTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATc < 1:3622473/93‑1 (MQ=255)
gTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATc > 1:4468569/1‑93 (MQ=255)
tCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCt > 2:2621410/1‑93 (MQ=255)
tCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCt > 2:5190755/1‑93 (MQ=255)
cTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTg > 1:1479103/1‑93 (MQ=255)
tgtgCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGa < 1:3105337/93‑1 (MQ=255)
tgtgCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGa > 1:3827057/1‑93 (MQ=255)
tgtgCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGa > 2:1929564/1‑93 (MQ=255)
gtgCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGAc > 1:1824667/1‑93 (MQ=255)
gctgcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCa < 1:5786117/93‑1 (MQ=255)
tgcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATc < 2:1273934/93‑1 (MQ=255)
gcACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCg < 2:2328230/93‑1 (MQ=255)
caccacCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCgg > 1:3447800/1‑93 (MQ=255)
caccaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTaa < 2:5387571/93‑1 (MQ=255)
accaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAt < 1:729974/93‑1 (MQ=255)
accaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAAt < 2:3294837/93‑1 (MQ=255)
ccaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATg < 2:1728699/93‑1 (MQ=255)
ccaACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGCTGGCTTCCAGGAAGATCTGACCATCGGTAATg > 1:456436/1‑93 (MQ=255)
caACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATgg > 2:5658453/1‑93 (MQ=255)
aaCACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGga > 1:6200955/1‑93 (MQ=255)
acacGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGgag > 2:3080125/1‑93 (MQ=255)
acacGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGgag > 1:2717212/1‑93 (MQ=255)
cacGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGgaga < 2:3469858/93‑1 (MQ=255)
cacGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGgaga > 2:1029263/1‑93 (MQ=255)
cacGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGgaga < 1:1567986/93‑1 (MQ=255)
acGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGAt < 1:5564673/93‑1 (MQ=255)
acGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGAt < 1:2408727/93‑1 (MQ=255)
cGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGAtt > 2:4821223/1‑93 (MQ=255)
gggATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTa < 2:1955510/93‑1 (MQ=255)
aTACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGt > 2:4229685/1‑93 (MQ=255)
aTACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGt < 1:1145890/93‑1 (MQ=255)
tACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGtt < 2:1204362/93‑1 (MQ=255)
tACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGtt > 1:4131725/1‑93 (MQ=255)
aCGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTg < 1:908724/93‑1 (MQ=255)
cGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTgg < 1:4278287/93‑1 (MQ=255)
ggAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGt < 2:5862131/93‑1 (MQ=255)
gAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTc > 2:908135/1‑93 (MQ=255)
gAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGCAATGGAGATTAGGTTGGTc > 2:5547687/1‑93 (MQ=255)
gAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGGTGGTTTCCCGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTc > 1:1120515/1‑93 (MQ=255)
aaTACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCgg > 1:474155/1‑93 (MQ=255)
aaTACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCgg < 1:4010367/93‑1 (MQ=255)
aaTACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCgg < 1:107134/93‑1 (MQ=255)
aTACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGTTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGga < 1:184371/93‑1 (MQ=255)
aTACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGga > 1:1983905/1‑93 (MQ=255)
cccGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaacg > 1:4221745/1‑93 (MQ=255)
cccGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaacg > 1:2046501/1‑93 (MQ=255)
cGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGgaacgaa < 1:2168420/93‑1 (MQ=255)
ggTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGaacgaacg > 1:5819671/1‑93 (MQ=255)
|
TGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGC > NC_000913/3916292‑3916471
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAA > NC_000913/3916291‑3916475
|
GTGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGAC > SRR4302533.4601168/1‑94 (MQ=60)
GTGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGAC > SRR4302533.2667813/1‑94 (MQ=60)
TGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATCCCCGGGTTGACC < SRR4302533.1509152/94‑1 (MQ=60)
TGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACC < SRR4302533.996177/94‑1 (MQ=60)
TGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACC < SRR4302533.1772274/94‑1 (MQ=60)
CAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCA > SRR4302533.4992380/1‑94 (MQ=60)
AGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAG > SRR4302533.3723074/1‑94 (MQ=60)
GAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGG < SRR4302533.4670636/94‑1 (MQ=60)
GCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGAC < SRR4302533.720088/94‑1 (MQ=60)
CGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGCTACGGAAATACCCGGGTTGACCGCAGGACG > SRR4302533.1739899/1‑94 (MQ=60)
GGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGA > SRR4302533.2732716/1‑94 (MQ=60)
GGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGA > SRR4302533.2176226/1‑94 (MQ=60)
GTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAA < SRR4302533.3141468/94‑1 (MQ=60)
GTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAA > SRR4302533.1152556/1‑94 (MQ=60)
GTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAA < SRR4302533.1120030/94‑1 (MQ=60)
GTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAA > SRR4302533.145649/1‑94 (MQ=60)
TACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAT < SRR4302533.4230590/94‑1 (MQ=60)
TACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAT > SRR4302533.133904/1‑94 (MQ=60)
TACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAT < SRR4302533.5299431/94‑1 (MQ=60)
TACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAAT > SRR4302533.3061703/1‑94 (MQ=60)
ACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATA < SRR4302533.4873967/94‑1 (MQ=60)
ACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATA < SRR4302533.3882757/94‑1 (MQ=60)
GGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACC < SRR4302533.627346/94‑1 (MQ=60)
GGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACC < SRR4302533.1756640/94‑1 (MQ=60)
GGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACC < SRR4302533.1779702/94‑1 (MQ=60)
GGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACC < SRR4302533.3720432/94‑1 (MQ=60)
GGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACC < SRR4302533.979760/94‑1 (MQ=60)
GATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCG < SRR4302533.4415370/94‑1 (MQ=60)
ATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGG < SRR4302533.4153418/94‑1 (MQ=60)
ATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGG < SRR4302533.3992159/94‑1 (MQ=60)
ATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGG < SRR4302533.5559904/94‑1 (MQ=60)
ACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCG < SRR4302533.2119590/94‑1 (MQ=60)
CCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGT < SRR4302533.5638639/94‑1 (MQ=60)
CCACCGGACAGTTTTTTCACGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGT > SRR4302533.1354879/1‑94 (MQ=60)
CACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTT > SRR4302533.359588/1‑94 (MQ=60)
CACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTT > SRR4302533.5205214/1‑94 (MQ=60)
ACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTG < SRR4302533.3138944/94‑1 (MQ=60)
CCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGA > SRR4302533.6330732/1‑94 (MQ=60)
CCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGA > SRR4302533.2464069/1‑94 (MQ=60)
CGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAC > SRR4302533.1150310/1‑94 (MQ=60)
CGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAA > SRR4302533.1932802/1‑94 (MQ=60)
CGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAA > SRR4302533.4531965/1‑94 (MQ=60)
CGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAA > SRR4302533.4437511/1‑94 (MQ=60)
CGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAA > SRR4302533.928926/1‑94 (MQ=60)
CGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAA > SRR4302533.5824006/1‑94 (MQ=60)
CGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAA > SRR4302533.2550127/1‑94 (MQ=60)
GGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAAC < SRR4302533.5828311/94‑1 (MQ=60)
GACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACA > SRR4302533.142840/1‑94 (MQ=60)
GACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACA < SRR4302533.6209650/94‑1 (MQ=60)
GCAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAG < SRR4302533.1676281/94‑1 (MQ=60)
ACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAG < SRR4302533.777776/94‑1 (MQ=60)
ACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAG < SRR4302533.123261/94‑1 (MQ=60)
ACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAG > SRR4302533.15830/1‑94 (MQ=60)
CAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGG < SRR4302533.3394530/94‑1 (MQ=60)
AGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGT > SRR4302533.398733/1‑94 (MQ=60)
GTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTT < SRR4302533.4358321/94‑1 (MQ=60)
GTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTT < SRR4302533.987539/94‑1 (MQ=60)
TTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACATGTTG > SRR4302533.194345/1‑94 (MQ=60)
TTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGG < SRR4302533.967419/94‑1 (MQ=60)
TTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGG > SRR4302533.3882875/1‑94 (MQ=60)
TTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGG > SRR4302533.5478928/1‑94 (MQ=60)
TTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGT < SRR4302533.4834298/94‑1 (MQ=60)
TTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGT < SRR4302533.3068768/94‑1 (MQ=60)
TTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGT < SRR4302533.2650088/94‑1 (MQ=60)
TTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTT < SRR4302533.5730650/94‑1 (MQ=60)
TTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTT < SRR4302533.1053246/94‑1 (MQ=60)
TTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGCTGGTTT > SRR4302533.2636537/1‑94 (MQ=60)
TCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTC > SRR4302533.1438464/1‑94 (MQ=60)
TCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTC > SRR4302533.6049466/1‑94 (MQ=60)
CATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCC > SRR4302533.424882/1‑94 (MQ=60)
CATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCC < SRR4302533.4830743/94‑1 (MQ=60)
TGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAG > SRR4302533.261565/1‑94 (MQ=60)
ATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACTCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGA > SRR4302533.3405312/1‑94 (MQ=60)
ATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGA < SRR4302533.73426/94‑1 (MQ=60)
TCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAA > SRR4302533.1123643/1‑94 (MQ=60)
TCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAA < SRR4302533.2516711/94‑1 (MQ=60)
TCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAA < SRR4302533.5541033/94‑1 (MQ=60)
CTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAG > SRR4302533.2008688/1‑94 (MQ=60)
CTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAG > SRR4302533.3890908/1‑94 (MQ=60)
CTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAG < SRR4302533.1546274/94‑1 (MQ=60)
TTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGA < SRR4302533.1502053/94‑1 (MQ=60)
TGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGAT < SRR4302533.1032690/94‑1 (MQ=60)
GGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC < SRR4302533.4551881/94‑1 (MQ=60)
GGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATC > SRR4302533.4495596/1‑94 (MQ=60)
GTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCT < SRR4302533.3644765/94‑1 (MQ=60)
TCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTG > SRR4302533.1488037/1‑94 (MQ=60)
CTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGA > SRR4302533.3850453/1‑94 (MQ=60)
CTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGA > SRR4302533.3440236/1‑94 (MQ=60)
CTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGA < SRR4302533.6203805/94‑1 (MQ=60)
TGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGAC > SRR4302533.1835813/1‑94 (MQ=60)
TGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGAC > SRR4302533.5625492/1‑94 (MQ=60)
TGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGAC < SRR4302533.3124426/94‑1 (MQ=60)
TGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGAC > SRR4302533.4053966/1‑94 (MQ=60)
GCTGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCAT < SRR4302533.5821066/94‑1 (MQ=60)
CTGCACCGCCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATC < SRR4302533.1836359/94‑1 (MQ=60)
TGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCG < SRR4302533.273049/94‑1 (MQ=60)
TGCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCG < SRR4302533.2222728/94‑1 (MQ=60)
GCACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGG > SRR4302533.3469088/1‑94 (MQ=60)
CACCACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGT > SRR4302533.3148162/1‑94 (MQ=60)
ACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATG > SRR4302533.2552428/1‑94 (MQ=60)
ACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATG > SRR4302533.2840234/1‑94 (MQ=60)
ACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATG < SRR4302533.734278/94‑1 (MQ=60)
ACCAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGCTGGCTTCCAGGAAGATCTGACCATCGGTAATG > SRR4302533.459163/1‑94 (MQ=60)
CAACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGA > SRR4302533.6238147/1‑94 (MQ=60)
AACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAG < SRR4302533.1182266/94‑1 (MQ=60)
AACACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAG > SRR4302533.2733894/1‑94 (MQ=60)
CACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGAT < SRR4302533.1577427/94‑1 (MQ=60)
ACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATT < SRR4302533.5598308/94‑1 (MQ=60)
ACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATT > SRR4302533.400757/1‑94 (MQ=60)
ACGGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATT < SRR4302533.2423607/94‑1 (MQ=60)
GGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTAC < SRR4302533.1354325/94‑1 (MQ=60)
GGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTAC < SRR4302533.1839545/94‑1 (MQ=60)
GGGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTAC < SRR4302533.4329263/94‑1 (MQ=60)
GGATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACG < SRR4302533.5041022/94‑1 (MQ=60)
ATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTT > SRR4302533.1353003/1‑94 (MQ=60)
ATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTT < SRR4302533.1152729/94‑1 (MQ=60)
ATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTT > SRR4302533.4156803/1‑94 (MQ=60)
ATACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTT < SRR4302533.2369414/94‑1 (MQ=60)
TACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTG < SRR4302533.138525/94‑1 (MQ=60)
TACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTG < SRR4302533.5401126/94‑1 (MQ=60)
ACGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGG < SRR4302533.914054/94‑1 (MQ=60)
CGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGT > SRR4302533.1566978/1‑94 (MQ=60)
CGGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGT < SRR4302533.4304015/94‑1 (MQ=60)
GGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGCAGATCTGACCATCGGTAATGGAGATTACGTTGGTC > SRR4302533.1803224/1‑94 (MQ=60)
GGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTC < SRR4302533.3065601/94‑1 (MQ=60)
GGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTC < SRR4302533.3859052/94‑1 (MQ=60)
GGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTC < SRR4302533.6307554/94‑1 (MQ=60)
GGAAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGGTGGTTTCCCGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTC > SRR4302533.1127162/1‑94 (MQ=60)
AAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGG < SRR4302533.3566208/94‑1 (MQ=60)
AAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGG > SRR4302533.5696192/1‑94 (MQ=60)
AAATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGG > SRR4302533.476986/1‑94 (MQ=60)
AATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGA > SRR4302533.1996045/1‑94 (MQ=60)
AATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGA < SRR4302533.107805/94‑1 (MQ=60)
AATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGA < SRR4302533.4034781/94‑1 (MQ=60)
ATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGTTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAA < SRR4302533.185518/94‑1 (MQ=60)
ATACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTTGGAA > SRR4302533.752054/1‑94 (MQ=60)
TACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAAC < SRR4302533.4203057/94‑1 (MQ=60)
TACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAAC < SRR4302533.1828374/94‑1 (MQ=60)
ACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACG > SRR4302533.326073/1‑94 (MQ=60)
ACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACG > SRR4302533.2059120/1‑94 (MQ=60)
ACCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACG > SRR4302533.4247274/1‑94 (MQ=60)
CCCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGA > SRR4302533.2552691/1‑94 (MQ=60)
CCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAA < SRR4302533.5868449/94‑1 (MQ=60)
CCGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAA > SRR4302533.4262128/1‑94 (MQ=60)
CGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAAC < SRR4302533.3128647/94‑1 (MQ=60)
CGGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAAC < SRR4302533.2181758/94‑1 (MQ=60)
GGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACG > SRR4302533.5854827/1‑94 (MQ=60)
GGGTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACG > SRR4302533.5935801/1‑94 (MQ=60)
GTTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCA < SRR4302533.1447233/94‑1 (MQ=60)
TTGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAG > SRR4302533.3688230/1‑94 (MQ=60)
TGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGA < SRR4302533.5593506/94‑1 (MQ=60)
TGACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGA > SRR4302533.2874516/1‑94 (MQ=60)
GACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAA < SRR4302533.2046391/94‑1 (MQ=60)
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GTGCCAGAGCGGTACGGATACCACCGGACAGTTTTTTCATGATCTTGGTCTGTGCTGCACCACCAACACGGGATACGGAAATACCCGGGTTAACCGCAGGACGAATACCGGCGTTGAACAGGTTGGTTTCCAGGAAGATCTGACCATCGGTAATGGAGATTACGTTGGTCGGAACGAACGCAGAA > NC_000913/3916291‑3916475
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
