Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,934,276 C→T H125Y (CAC→TAC)  rbsB → D‑ribose periplasmic binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,934,2760CT99.3% 1649.7 / ‑3.6 452H125Y (CAC→TAC) rbsBD‑ribose periplasmic binding protein
Reads supporting (aligned to +/- strand):  ref base C (2/1);  new base T (234/215);  total (236/216)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.14e-01

Only 100 of 474 total aligned reads displayed.

GCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTG  >  NC_000913/3934186‑3934365
                                                                                          |                                                                                         
gCAGTGGGTAATGCTGTGAAGATGGCTAGCCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCtac                                                                                         <  1:9733288/93‑1 (MQ=255)
gCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCtac                                                                                         >  1:4988349/1‑93 (MQ=255)
 cAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCtaca                                                                                        <  2:4843933/93‑1 (MQ=255)
  aGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAt                                                                                       <  2:9140821/93‑1 (MQ=255)
    tGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTg                                                                                     >  2:58408/1‑93 (MQ=255)
     gggTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGc                                                                                    <  1:5399796/93‑1 (MQ=255)
       gTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCtt                                                                                  <  1:8566105/93‑1 (MQ=255)
        tAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTc                                                                                 >  1:6918776/1‑93 (MQ=255)
        tAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTc                                                                                 <  1:9561334/93‑1 (MQ=255)
        tAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTc                                                                                 >  1:3997857/1‑93 (MQ=255)
        tAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTc                                                                                 <  2:2511852/93‑1 (MQ=255)
              tgtgAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATaa                                                                           <  1:4775451/93‑1 (MQ=255)
               gtgAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGTGGAAGTGGGGAGCTACATTGCGTCTGATAAc                                                                          >  1:2396433/1‑93 (MQ=255)
               gtgAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAAc                                                                          <  2:7771875/93‑1 (MQ=255)
               gtgAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAAc                                                                          <  1:415997/93‑1 (MQ=255)
                tgAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACg                                                                         >  2:2221084/1‑93 (MQ=255)
                 gAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGt                                                                        >  2:5988940/1‑93 (MQ=255)
                 gAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGt                                                                        >  2:7550243/1‑93 (MQ=255)
                  aaGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTa                                                                       <  2:8450215/93‑1 (MQ=255)
                  aaGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTa                                                                       <  2:5019952/93‑1 (MQ=255)
                   aGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTAc                                                                      >  2:4002191/1‑93 (MQ=255)
                   aGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTAc                                                                      >  1:4885623/1‑93 (MQ=255)
                    gATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACt                                                                     <  1:2246566/93‑1 (MQ=255)
                    gATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACt                                                                     <  1:7937194/93‑1 (MQ=255)
                    gATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACt                                                                     >  2:7163369/1‑93 (MQ=255)
                    gATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATAGCTTCTGATAACGTACt                                                                     >  1:8953051/1‑93 (MQ=255)
                     aTGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTg                                                                    <  2:57450/93‑1 (MQ=255)
                     aTGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTg                                                                    <  1:2123983/93‑1 (MQ=255)
                         cTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGggcg                                                                <  2:4706426/93‑1 (MQ=255)
                          tAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGggcgg                                                               <  1:1596267/93‑1 (MQ=255)
                           aaCCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGggcggc                                                              >  2:10006856/1‑93 (MQ=255)
                             ccAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaa                                                            >  2:1528742/1‑93 (MQ=255)
                              cAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGGGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaaa                                                           >  1:5096496/1‑93 (MQ=255)
                               cggCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaaaa                                                          <  1:3534661/92‑1 (MQ=255)
                               aGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaaaa                                                          >  1:5747838/1‑93 (MQ=255)
                                ggCGAACGACCCGGTGATCGCTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAt                                                         <  1:1979795/93‑1 (MQ=255)
                                ggCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAt                                                         <  2:3401057/93‑1 (MQ=255)
                                ggCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAt                                                         >  1:1018424/1‑93 (MQ=255)
                                 gCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATc                                                        >  1:5016315/1‑93 (MQ=255)
                                    aaCATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCt                                                     >  2:9366592/1‑93 (MQ=255)
                                     aCATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTg                                                    <  1:768251/93‑1 (MQ=255)
                                       aTCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGt                                                  >  2:159467/1‑93 (MQ=255)
                                        tCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTg                                                 <  2:7684898/93‑1 (MQ=255)
                                        tCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTg                                                 >  2:1292362/1‑93 (MQ=255)
                                        tCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGGGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTg                                                 >  1:5941493/1‑93 (MQ=255)
                                            ggTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTa                                             >  1:3856669/1‑93 (MQ=255)
                                             gTTATCACTCTTGAGCGCCAGGCAACGAAAGGGGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAc                                            >  2:9053832/1‑93 (MQ=255)
                                             gTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAc                                            >  1:8790069/1‑93 (MQ=255)
                                             gTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAc                                            <  2:7273795/93‑1 (MQ=255)
                                              ttATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACa                                           <  2:4430686/93‑1 (MQ=255)
                                              ttATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGCGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACa                                           >  1:6357766/1‑93 (MQ=255)
                                               tATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACAt                                          <  2:6325240/93‑1 (MQ=255)
                                                ttCACTCTTGACCGCCAGGCAACGAAAGGTGGAGTAGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATc                                         <  1:6824480/92‑1 (MQ=255)
                                                 tCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATcg                                        <  2:188781/93‑1 (MQ=255)
                                                  cACTCTTTACCGCCAGTCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATcgc                                       <  1:9188035/93‑1 (MQ=255)
                                                  cACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATcgc                                       <  1:2530147/93‑1 (MQ=255)
                                                  cACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTAAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATcgc                                       <  1:6483267/93‑1 (MQ=255)
                                                   aCTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATcgcg                                      >  2:7936613/1‑93 (MQ=255)
                                                      ctTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCgaag                                   >  2:520138/1‑93 (MQ=255)
                                                       ttGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCgaaga                                  <  1:1116784/93‑1 (MQ=255)
                                                       ttGACCGCCAGGCAACGAAAGGTGAAGTGGAGAGCTACATTGCTTCTGATAACATACTGGGCGGCAAAATCGCTGGAGATTACATCGCtaaga                                  >  2:5574199/1‑93 (MQ=255)
                                                        tGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCgaagaa                                 <  1:7216610/93‑1 (MQ=255)
                                                           ccGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGc                              <  2:1672794/93‑1 (MQ=255)
                                                             gCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCgg                            >  2:6745070/1‑93 (MQ=255)
                                                             gCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCgg                            >  1:2714981/1‑93 (MQ=255)
                                                              ccAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCggg                           <  2:8239078/93‑1 (MQ=255)
                                                              ccAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCggg                           <  2:6527719/93‑1 (MQ=255)
                                                              ccAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCggg                           <  2:4131461/93‑1 (MQ=255)
                                                              ccAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCggg                           >  1:1403113/1‑93 (MQ=255)
                                                               cAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCgggg                          >  2:1965627/1‑92 (MQ=255)
                                                                aGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTg                         <  1:4403882/93‑1 (MQ=255)
                                                                aGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTg                         >  1:5308422/1‑93 (MQ=255)
                                                                 ggCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGa                        <  2:3691085/93‑1 (MQ=255)
                                                                 ggCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGa                        >  1:3218761/1‑93 (MQ=255)
                                                                  gCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGaa                       >  2:5369724/1‑93 (MQ=255)
                                                                  gCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGaa                       <  1:5522192/93‑1 (MQ=255)
                                                                    aaCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAgg                     <  2:3125332/93‑1 (MQ=255)
                                                                    aaCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAgg                     <  2:9299570/93‑1 (MQ=255)
                                                                     aCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGt                    >  2:9489546/1‑93 (MQ=255)
                                                                      cGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTg                   <  1:3670148/93‑1 (MQ=255)
                                                                      cGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTg                   >  2:8302063/1‑93 (MQ=255)
                                                                       gAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGc                  >  1:6107670/1‑93 (MQ=255)
                                                                          aGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCaa               >  1:4603540/1‑93 (MQ=255)
                                                                          aGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCaa               >  1:3032369/1‑93 (MQ=255)
                                                                            gTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAg             <  2:8027688/93‑1 (MQ=255)
                                                                            gTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGGGAAGGTGCCAAAg             >  1:7450471/1‑93 (MQ=255)
                                                                             tGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGt            <  1:8269200/93‑1 (MQ=255)
                                                                             ggAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGt            <  2:1415377/92‑1 (MQ=255)
                                                                              gAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGtt           >  2:5653738/1‑93 (MQ=255)
                                                                               taGTGGTGTGCTACATTGCTTCTGATTACGTACTGGGCGGCAAAATCGCTGGTGCTTACATCGCGAGGAAAGCGGGTGAAGGTGCCAAAGTTa          <  2:8981129/92‑1 (MQ=255)
                                                                               aaGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTa          <  1:2919713/93‑1 (MQ=255)
                                                                               aaGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTa          <  2:333046/93‑1 (MQ=255)
                                                                                 gtggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATc        <  2:870886/93‑1 (MQ=255)
                                                                                 gtggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATc        <  2:4796908/93‑1 (MQ=255)
                                                                                 gtggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATc        >  2:3036701/1‑93 (MQ=255)
                                                                                 gtggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATc        <  2:9657888/93‑1 (MQ=255)
                                                                                   ggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGa      <  2:355538/93‑1 (MQ=255)
                                                                                     tgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGc    <  1:9478592/93‑1 (MQ=255)
                                                                                       aGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTg  >  1:4247266/1‑93 (MQ=255)
                                                                                       aGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTg  >  1:5820584/1‑93 (MQ=255)
                                                                                          |                                                                                         
GCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTG  >  NC_000913/3934186‑3934365

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 242 total aligned reads displayed.
GACGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCAAG  >  NC_000913/3934183‑3934369
                                                                                             |                                                                                             
GACGGAGTGCGTAATGCTGTGAAGATGGCTAACCAGTCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCT                                                                                               <  SRR4302540.5097824/94‑1 (MQ=60)
  CGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTAC                                                                                             >  SRR4302540.9506811/1‑94 (MQ=60)
  CGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTAC                                                                                             >  SRR4302540.771332/1‑94 (MQ=60)
  CGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTAC                                                                                             >  SRR4302540.5042357/1‑94 (MQ=60)
   GCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACA                                                                                            >  SRR4302540.4395092/1‑94 (MQ=60)
   GCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACA                                                                                            >  SRR4302540.5334448/1‑94 (MQ=60)
   GCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACA                                                                                            >  SRR4302540.114717/1‑94 (MQ=60)
     AGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATT                                                                                          <  SRR4302540.5857926/94‑1 (MQ=60)
     AGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATT                                                                                          >  SRR4302540.3027486/1‑94 (MQ=60)
     AGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATT                                                                                          <  SRR4302540.7807436/94‑1 (MQ=60)
      GTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTAGATTG                                                                                         <  SRR4302540.6445031/94‑1 (MQ=60)
       TGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGC                                                                                        >  SRR4302540.8503482/1‑94 (MQ=60)
       TGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGC                                                                                        >  SRR4302540.2399913/1‑94 (MQ=60)
         GGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTT                                                                                      >  SRR4302540.9620633/1‑94 (MQ=60)
          GTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTC                                                                                     <  SRR4302540.5876962/94‑1 (MQ=60)
          GTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTC                                                                                     >  SRR4302540.6995760/1‑94 (MQ=60)
          GTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTC                                                                                     <  SRR4302540.5300744/94‑1 (MQ=60)
          GTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTC                                                                                     >  SRR4302540.4040886/1‑94 (MQ=60)
           TAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCT                                                                                    <  SRR4302540.1430131/94‑1 (MQ=60)
           TAATGCTGTGAAGATGGCTAACCAGGCAAACATCCCGGTTATCACTCTAGACCGCCAGGCAACGAATGGTGAAGAGGTTTGCTACATTGCTTCT                                                                                    >  SRR4302540.7618498/1‑94 (MQ=60)
            AATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTG                                                                                   >  SRR4302540.3201155/1‑94 (MQ=60)
            AATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTG                                                                                   >  SRR4302540.1077167/1‑94 (MQ=60)
            AATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGGGAAGGGGTGAGCTAAATTGCTTCTA                                                                                   >  SRR4302540.3003395/1‑94 (MQ=60)
               GCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATA                                                                                <  SRR4302540.2709475/94‑1 (MQ=60)
                CTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAA                                                                               >  SRR4302540.3289643/1‑94 (MQ=60)
                CTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAA                                                                               >  SRR4302540.6049865/1‑94 (MQ=60)
                 TGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAAC                                                                              <  SRR4302540.6900053/94‑1 (MQ=60)
                  GTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACG                                                                             >  SRR4302540.8551996/1‑94 (MQ=60)
                  GTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACG                                                                             >  SRR4302540.4477104/1‑94 (MQ=60)
                  GTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACG                                                                             <  SRR4302540.420357/94‑1 (MQ=60)
                  GTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACG                                                                             <  SRR4302540.4561176/94‑1 (MQ=60)
                  GTGAAGAAGGCTAACCAGGCGAACAACCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACG                                                                             <  SRR4302540.420356/94‑1 (MQ=60)
                   TGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGT                                                                            <  SRR4302540.2567400/94‑1 (MQ=60)
                    GAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTA                                                                           >  SRR4302540.9017599/1‑94 (MQ=60)
                     AAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTAC                                                                          <  SRR4302540.4033947/94‑1 (MQ=60)
                     AAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTAC                                                                          >  SRR4302540.4938109/1‑94 (MQ=60)
                     AAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTAC                                                                          <  SRR4302540.9388735/94‑1 (MQ=60)
                     AAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTAC                                                                          <  SRR4302540.2123942/94‑1 (MQ=60)
                      AGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACT                                                                         <  SRR4302540.6425589/94‑1 (MQ=60)
                      AGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACT                                                                         >  SRR4302540.1560417/1‑94 (MQ=60)
                      AGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACT                                                                         >  SRR4302540.8188372/1‑94 (MQ=60)
                      AGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACT                                                                         >  SRR4302540.6749979/1‑94 (MQ=60)
                      AGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATAGCTTCTGATAACGTACT                                                                         >  SRR4302540.9058669/1‑94 (MQ=60)
                       GATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTG                                                                        >  SRR4302540.4223281/1‑94 (MQ=60)
                       GATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTG                                                                        <  SRR4302540.364179/94‑1 (MQ=60)
                       GATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTG                                                                        <  SRR4302540.8029698/94‑1 (MQ=60)
                       GATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTG                                                                        <  SRR4302540.2270700/94‑1 (MQ=60)
                       GATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTG                                                                        >  SRR4302540.2798330/1‑94 (MQ=60)
                        ATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGG                                                                       >  SRR4302540.9736627/1‑94 (MQ=60)
                        ATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGG                                                                       <  SRR4302540.5728573/94‑1 (MQ=60)
                        ATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGG                                                                       <  SRR4302540.2146770/94‑1 (MQ=60)
                         TGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGG                                                                      <  SRR4302540.8836490/94‑1 (MQ=60)
                          GGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGC                                                                     <  SRR4302540.2463345/94‑1 (MQ=60)
                           GCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCG                                                                    <  SRR4302540.2466165/94‑1 (MQ=60)
                           GCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCG                                                                    >  SRR4302540.580374/1‑94 (MQ=60)
                            CTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGG                                                                   >  SRR4302540.3855579/1‑94 (MQ=60)
                             TAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGC                                                                  >  SRR4302540.7035955/1‑94 (MQ=60)
                             TAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGC                                                                  <  SRR4302540.1613709/94‑1 (MQ=60)
                              AACCAGGCGAACATCCCGGTTATCACTCTTGACCGCTAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCA                                                                 <  SRR4302540.9267067/94‑1 (MQ=60)
                              AACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCA                                                                 >  SRR4302540.6521472/1‑94 (MQ=60)
                              AACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCA                                                                 >  SRR4302540.6521471/1‑94 (MQ=60)
                                CCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAA                                                               >  SRR4302540.1545809/1‑94 (MQ=60)
                                CCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAA                                                               >  SRR4302540.5151642/1‑94 (MQ=60)
                                CCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGGGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAA                                                               >  SRR4302540.5151643/1‑94 (MQ=60)
                                 CAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAA                                                              >  SRR4302540.5811247/1‑94 (MQ=60)
                                  CGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAT                                                             <  SRR4302540.3573248/94‑1 (MQ=60)
                                  AGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAT                                                             >  SRR4302540.1028756/1‑94 (MQ=60)
                                  AGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAT                                                             <  SRR4302540.10076317/94‑1 (MQ=60)
                                  AGGCGAACATCCAGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAT                                                             <  SRR4302540.57554/94‑1 (MQ=60)
                                   GGCGAACGACCCGGTGATCGCTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATC                                                            <  SRR4302540.2001274/94‑1 (MQ=60)
                                   GGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATC                                                            >  SRR4302540.5070628/1‑94 (MQ=60)
                                   GGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATC                                                            >  SRR4302540.5070627/1‑94 (MQ=60)
                                   GGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATC                                                            <  SRR4302540.8162778/94‑1 (MQ=60)
                                    GCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCG                                                           <  SRR4302540.5408016/94‑1 (MQ=60)
                                    GCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCG                                                           >  SRR4302540.2036769/1‑94 (MQ=60)
                                     CGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGC                                                          >  SRR4302540.1671574/1‑94 (MQ=60)
                                       AACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTG                                                        <  SRR4302540.4131960/94‑1 (MQ=60)
                                        ACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGG                                                       <  SRR4302540.396297/94‑1 (MQ=60)
                                        ACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGG                                                       <  SRR4302540.776436/94‑1 (MQ=60)
                                         CATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGT                                                      <  SRR4302540.4664786/94‑1 (MQ=60)
                                          ATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTG                                                     >  SRR4302540.3924369/1‑94 (MQ=60)
                                          ATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTG                                                     >  SRR4302540.5468042/1‑94 (MQ=60)
                                          ATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGGGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTG                                                     >  SRR4302540.6007172/1‑94 (MQ=60)
                                           TCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGA                                                    >  SRR4302540.5062216/1‑94 (MQ=60)
                                            CCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGAT                                                   <  SRR4302540.1251410/94‑1 (MQ=60)
                                            CCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGAT                                                   <  SRR4302540.1410108/94‑1 (MQ=60)
                                            CCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGAT                                                   <  SRR4302540.8450080/94‑1 (MQ=60)
                                            CCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGAT                                                   >  SRR4302540.3464110/1‑94 (MQ=60)
                                             CCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATT                                                  <  SRR4302540.3871404/94‑1 (MQ=60)
                                              CGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTA                                                 <  SRR4302540.4807833/94‑1 (MQ=60)
                                              CGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTA                                                 >  SRR4302540.2158279/1‑94 (MQ=60)
                                               GGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAC                                                <  SRR4302540.2428292/94‑1 (MQ=60)
                                               GGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAC                                                >  SRR4302540.8891769/1‑94 (MQ=60)
                                               GGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAC                                                >  SRR4302540.1000349/1‑94 (MQ=60)
                                               GGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAC                                                >  SRR4302540.4224710/1‑94 (MQ=60)
                                                 TTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACAT                                              <  SRR4302540.5425921/94‑1 (MQ=60)
                                                 TTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACAT                                              <  SRR4302540.5526195/94‑1 (MQ=60)
                                                 TTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACAT                                              <  SRR4302540.7346883/94‑1 (MQ=60)
                                                  TATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATC                                             >  SRR4302540.950585/1‑94 (MQ=60)
                                                  TATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAACCGCTGGGGATTACATC                                             >  SRR4302540.9080968/1‑94 (MQ=60)
                                                   TTCACTCTTGACCGCCAGGCAACGAAAGGTGGAGTAGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCG                                            <  SRR4302540.6900033/94‑1 (MQ=60)
                                                   ATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCG                                            <  SRR4302540.366581/94‑1 (MQ=60)
                                                   ATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCG                                            <  SRR4302540.10057676/94‑1 (MQ=60)
                                                   ATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCG                                            >  SRR4302540.5501725/1‑94 (MQ=60)
                                                   ATCACTCTTGACCGCCAGGCAACGAAAGGCGAAGTGGGGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCG                                            >  SRR4302540.1541791/1‑94 (MQ=60)
                                                     CACTCTTTACCGCCAGTCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCG                                          <  SRR4302540.9298221/94‑1 (MQ=60)
                                                     CACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCG                                          <  SRR4302540.4858033/94‑1 (MQ=60)
                                                     CACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCG                                          <  SRR4302540.2557449/94‑1 (MQ=60)
                                                      ACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGA                                         <  SRR4302540.4716165/94‑1 (MQ=60)
                                                       CTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAA                                        >  SRR4302540.2208252/1‑94 (MQ=60)
                                                       CTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAA                                        >  SRR4302540.8000260/1‑94 (MQ=60)
                                                        TCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAG                                       <  SRR4302540.1652449/94‑1 (MQ=60)
                                                         CTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGA                                      <  SRR4302540.2966391/94‑1 (MQ=60)
                                                         CTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGA                                      <  SRR4302540.5253705/94‑1 (MQ=60)
                                                         CTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGA                                      >  SRR4302540.6690446/1‑94 (MQ=60)
                                                         CTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGA                                      >  SRR4302540.9673608/1‑94 (MQ=60)
                                                          TTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAA                                     <  SRR4302540.1128364/94‑1 (MQ=60)
                                                          TTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAA                                     <  SRR4302540.1128363/94‑1 (MQ=60)
                                                           TGACCGCCATGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTTCTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAA                                    <  SRR4302540.7506417/94‑1 (MQ=60)
                                                           TGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAA                                    <  SRR4302540.7297048/94‑1 (MQ=60)
                                                           TGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAA                                    <  SRR4302540.6010723/94‑1 (MQ=60)
                                                           TGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAA                                    <  SRR4302540.4792166/94‑1 (MQ=60)
                                                             GCCGCGAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGC                                  <  SRR4302540.4259049/94‑1 (MQ=60)
                                                             ACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGC                                  <  SRR4302540.4890017/94‑1 (MQ=60)
                                                              CCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCG                                 <  SRR4302540.3133476/94‑1 (MQ=60)
                                                              CCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCG                                 >  SRR4302540.9624479/1‑94 (MQ=60)
                                                              CCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCG                                 >  SRR4302540.6450065/1‑94 (MQ=60)
                                                              CCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCG                                 <  SRR4302540.4959099/94‑1 (MQ=60)
                                                              CCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCG                                 <  SRR4302540.4988976/94‑1 (MQ=60)
                                                              CCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCG                                 >  SRR4302540.589329/1‑94 (MQ=60)
                                                               CGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGG                                >  SRR4302540.2744257/1‑94 (MQ=60)
                                                               CGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGG                                >  SRR4302540.7043432/1‑94 (MQ=60)
                                                               CGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGG                                >  SRR4302540.3649629/1‑94 (MQ=60)
                                                               CGCCAGGCAACGAAAGGGGAAGTGGTGAGCTACATTGTTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGG                                >  SRR4302540.2853732/1‑94 (MQ=60)
                                                                GCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGG                               <  SRR4302540.3443621/94‑1 (MQ=60)
                                                                GCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGG                               >  SRR4302540.6312375/1‑94 (MQ=60)
                                                                GCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGG                               >  SRR4302540.1418216/1‑94 (MQ=60)
                                                                 CCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGT                              <  SRR4302540.3783517/94‑1 (MQ=60)
                                                                 CCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGT                              >  SRR4302540.1089577/1‑94 (MQ=60)
                                                                 CCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGG                              >  SRR4302540.7397675/1‑94 (MQ=60)
                                                                 CCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGG                              >  SRR4302540.5476117/1‑94 (MQ=60)
                                                                 CCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGG                              >  SRR4302540.2343768/1‑94 (MQ=60)
                                                                  CAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTG                             >  SRR4302540.3784145/1‑94 (MQ=60)
                                                                  CAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTG                             >  SRR4302540.5366521/1‑94 (MQ=60)
                                                                  CAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAAATCGCGAAGCAAGCGGGTG                             >  SRR4302540.5366522/1‑94 (MQ=60)
                                                                   AGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGA                            >  SRR4302540.1004682/1‑94 (MQ=60)
                                                                   AGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGA                            <  SRR4302540.4451632/94‑1 (MQ=60)
                                                                   AGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGA                            >  SRR4302540.8288997/1‑94 (MQ=60)
                                                                   AGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGA                            >  SRR4302540.3253726/1‑94 (MQ=60)
                                                                   AGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGA                            <  SRR4302540.9007830/94‑1 (MQ=60)
                                                                   AGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGGGA                            >  SRR4302540.230441/1‑94 (MQ=60)
                                                                    GGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAA                           >  SRR4302540.2162453/1‑94 (MQ=60)
                                                                     GCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAG                          <  SRR4302540.5583002/94‑1 (MQ=60)
                                                                     GCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAG                          >  SRR4302540.1470811/1‑94 (MQ=60)
                                                                     GCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAG                          <  SRR4302540.6956105/94‑1 (MQ=60)
                                                                      CAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGG                         <  SRR4302540.6617009/94‑1 (MQ=60)
                                                                      CAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGG                         <  SRR4302540.7263905/94‑1 (MQ=60)
                                                                       AACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGT                        >  SRR4302540.4380525/1‑94 (MQ=60)
                                                                       AACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGT                        <  SRR4302540.5000316/94‑1 (MQ=60)
                                                                       AACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGG                        >  SRR4302540.2417991/1‑94 (MQ=60)
                                                                        ACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTG                       >  SRR4302540.9699787/1‑94 (MQ=60)
                                                                         CGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGC                      >  SRR4302540.6175692/1‑94 (MQ=60)
                                                                         CGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGC                      <  SRR4302540.3710298/94‑1 (MQ=60)
                                                                         CGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGC                      <  SRR4302540.2700849/94‑1 (MQ=60)
                                                                         CGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGC                      >  SRR4302540.7564678/1‑94 (MQ=60)
                                                                          GAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCC                     >  SRR4302540.8865089/1‑94 (MQ=60)
                                                                           AAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCA                    >  SRR4302540.294312/1‑94 (MQ=60)
                                                                           AAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCA                    >  SRR4302540.9239297/1‑94 (MQ=60)
                                                                           AAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCA                    <  SRR4302540.9739693/94‑1 (MQ=60)
                                                                            AAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAA                   >  SRR4302540.3065660/1‑94 (MQ=60)
                                                                            AAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAA                   >  SRR4302540.4652996/1‑94 (MQ=60)
                                                                             AGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAA                  >  SRR4302540.5851452/1‑94 (MQ=60)
                                                                              GGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAG                 <  SRR4302540.490435/94‑1 (MQ=60)
                                                                              GGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGGGAAGGTGCCAAAG                 >  SRR4302540.7533512/1‑94 (MQ=60)
                                                                              GGTGAAGCGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAG                 <  SRR4302540.490434/94‑1 (MQ=60)
                                                                               GTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGT                >  SRR4302540.8881160/1‑94 (MQ=60)
                                                                               GTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGT                <  SRR4302540.4182267/94‑1 (MQ=60)
                                                                                TGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTT               >  SRR4302540.5048381/1‑94 (MQ=60)
                                                                                TGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTT               <  SRR4302540.8365280/94‑1 (MQ=60)
                                                                                TGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTT               >  SRR4302540.6262488/1‑94 (MQ=60)
                                                                                  AAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTAT             <  SRR4302540.7808296/94‑1 (MQ=60)
                                                                                  AAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTAT             <  SRR4302540.2023039/94‑1 (MQ=60)
                                                                                  AAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTAT             <  SRR4302540.2951692/94‑1 (MQ=60)
                                                                                  AAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTAT             <  SRR4302540.6235377/94‑1 (MQ=60)
                                                                                  AAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTAT             >  SRR4302540.6063021/1‑94 (MQ=60)
                                                                                   AGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATC            <  SRR4302540.5122298/94‑1 (MQ=60)
                                                                                     TGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGA          <  SRR4302540.6934968/94‑1 (MQ=60)
                                                                                      GGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAG         <  SRR4302540.9839114/94‑1 (MQ=60)
                                                                                      GGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAG         <  SRR4302540.4418422/94‑1 (MQ=60)
                                                                                      GGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAG         >  SRR4302540.8973357/1‑94 (MQ=60)
                                                                                        TGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCT       <  SRR4302540.9590994/94‑1 (MQ=60)
                                                                                        GGAGCTACATTGCTTCTGATAACGTAGTGGGCGGCCAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCT       <  SRR4302540.8517445/94‑1 (MQ=60)
                                                                                         GAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTG      >  SRR4302540.5884918/1‑94 (MQ=60)
                                                                                         GAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTG      <  SRR4302540.6005003/94‑1 (MQ=60)
                                                                                         GAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTG      >  SRR4302540.4293474/1‑94 (MQ=60)
                                                                                          AGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAGAGTTATCGAGCTGC     >  SRR4302540.7726266/1‑94 (MQ=60)
                                                                                          AGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGC     >  SRR4302540.4480802/1‑94 (MQ=60)
                                                                                             TACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCAAG  >  SRR4302540.7259556/1‑94 (MQ=60)
                                                                                             TACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCAAG  >  SRR4302540.3245923/1‑94 (MQ=60)
                                                                                             TACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCAAG  <  SRR4302540.2954828/94‑1 (MQ=60)
                                                                                             |                                                                                             
GACGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCAAG  >  NC_000913/3934183‑3934369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑