Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,934,276 |
C→T |
H125Y (CAC→TAC) |
rbsB → |
D‑ribose periplasmic binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,934,276 | 0 | C | T | 100.0%
| 969.4
/ NA
| 259 | H125Y (CAC→TAC) | rbsB | D‑ribose periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (119/140); total (119/140) |
Only 100 of 265 total aligned reads displayed.
GCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTG > NC_000913/3934186‑3934365
|
gTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAtt > 1:863647/1‑93 (MQ=255)
tGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTg > 1:1534695/1‑93 (MQ=255)
ggTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCt < 1:2089005/93‑1 (MQ=255)
tAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTc > 1:4287366/1‑93 (MQ=255)
tAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTc > 1:2008397/1‑93 (MQ=255)
tAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTc < 2:1299633/93‑1 (MQ=255)
aaTGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCt > 1:2794200/1‑93 (MQ=255)
cTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATa < 2:669139/93‑1 (MQ=255)
cTGTGAAGATGGCTAACCAGGCGAACATCCCGGTGATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATa < 2:151549/93‑1 (MQ=255)
tgtgAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATaa > 1:5261363/1‑93 (MQ=255)
gtgAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGGTTCTGATAAc < 1:2866380/93‑1 (MQ=255)
gtgAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAAc < 1:1644345/93‑1 (MQ=255)
gAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGt < 2:6196191/93‑1 (MQ=255)
gAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGt > 2:3821078/1‑93 (MQ=255)
aaGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTa < 2:5457595/93‑1 (MQ=255)
aGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTAc < 1:122158/93‑1 (MQ=255)
aGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTAc < 2:3548614/93‑1 (MQ=255)
gATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACt > 1:3715227/1‑93 (MQ=255)
tGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTgg < 1:4782917/93‑1 (MQ=255)
tAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGggcgg > 1:560701/1‑93 (MQ=255)
aaCCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGggcggc > 1:503188/1‑93 (MQ=255)
cAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAATGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaaa > 2:5133875/1‑93 (MQ=255)
cAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaaa > 1:5720781/1‑93 (MQ=255)
cAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaaa > 2:3697573/1‑93 (MQ=255)
aGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaaaa > 1:1719549/1‑93 (MQ=255)
aGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaaaa < 1:5781941/93‑1 (MQ=255)
aGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCaaaa < 2:4490191/93‑1 (MQ=255)
gAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGc > 2:4936118/1‑93 (MQ=255)
gAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGc < 1:2594294/93‑1 (MQ=255)
aaCATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCt > 1:4218602/1‑93 (MQ=255)
cATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTgg > 1:328737/1‑93 (MQ=255)
cATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTgg > 1:1393416/1‑93 (MQ=255)
tCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTg > 1:1107506/1‑93 (MQ=255)
cccGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGa < 2:2100029/93‑1 (MQ=255)
cccGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGa > 2:556914/1‑93 (MQ=255)
cccGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGa < 1:5433614/93‑1 (MQ=255)
cccGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGa > 1:3133544/1‑93 (MQ=255)
ccGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGAt > 2:2488541/1‑93 (MQ=255)
ccGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGAt > 1:1510342/1‑93 (MQ=255)
gTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTAc > 2:3618528/1‑93 (MQ=255)
ttATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTGCTGGGCGGCAAAATCGCTGGTGATTACa > 1:3755434/1‑93 (MQ=255)
ttATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACa < 2:2428606/93‑1 (MQ=255)
ttATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACa > 1:3656663/1‑93 (MQ=255)
tATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACAt < 2:3373047/93‑1 (MQ=255)
tATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACAt < 2:3970846/93‑1 (MQ=255)
tATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACAt > 1:5231908/1‑93 (MQ=255)
ttCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTTGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATc < 2:791933/92‑1 (MQ=255)
aTCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATc < 2:1841114/93‑1 (MQ=255)
cgctctTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATcgc < 2:4781119/91‑1 (MQ=255)
cACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATcgc < 1:603465/93‑1 (MQ=255)
aCTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATcgcg > 1:5520713/1‑93 (MQ=255)
ttGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCgaaga > 2:3329922/1‑93 (MQ=255)
tGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCgaagaa < 1:2384560/93‑1 (MQ=255)
tGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCgaagaa < 2:6070358/93‑1 (MQ=255)
gACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGaaa < 1:4115971/93‑1 (MQ=255)
aCCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAg > 1:1336919/1‑93 (MQ=255)
ccGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGc < 1:5713014/93‑1 (MQ=255)
ccGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGc < 1:5170028/93‑1 (MQ=255)
ccAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCggg < 2:4592150/93‑1 (MQ=255)
cAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCgggg > 1:1820889/1‑92 (MQ=255)
aGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTg < 2:5958089/93‑1 (MQ=255)
aGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTg > 1:2104476/1‑93 (MQ=255)
ggCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGa > 2:2736052/1‑93 (MQ=255)
cAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAg < 2:5762116/93‑1 (MQ=255)
aaCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAgg > 1:3374398/1‑93 (MQ=255)
aCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGt < 1:4186613/93‑1 (MQ=255)
aCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGt < 1:362472/93‑1 (MQ=255)
aCGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGt > 1:1495007/1‑93 (MQ=255)
aCGAAAGGTGAAGTGGTGAGCTACATTACTTCTGATACCGTACTGGGCGCCAAAATCGCGCGTGATTCCATCGCGAAGAAAGCGGGTGAAGGt < 2:2052105/93‑1 (MQ=255)
cGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTg < 2:1063444/93‑1 (MQ=255)
cGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTg > 1:3335447/1‑93 (MQ=255)
gAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGc > 1:2195689/1‑93 (MQ=255)
gAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGc < 1:643041/93‑1 (MQ=255)
aaGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCa > 2:2580583/1‑93 (MQ=255)
aGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCaa > 2:4700705/1‑93 (MQ=255)
aGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCaa > 2:5598689/1‑93 (MQ=255)
aGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCaa < 2:4321655/93‑1 (MQ=255)
ggTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCaaa < 2:4439560/93‑1 (MQ=255)
ggTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCaaa > 1:900416/1‑93 (MQ=255)
ggTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCaaa > 1:2444041/1‑93 (MQ=255)
tGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGt > 2:1365610/1‑93 (MQ=255)
tGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGt > 2:1601242/1‑93 (MQ=255)
gAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGtt > 2:738876/1‑93 (MQ=255)
gAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGtt < 2:3241191/93‑1 (MQ=255)
aaGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTa > 2:343732/1‑93 (MQ=255)
aaGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTa < 1:39933/93‑1 (MQ=255)
aaGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTa < 1:4716892/93‑1 (MQ=255)
aGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAACATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTAt > 1:4434467/1‑93 (MQ=255)
aGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTAt < 2:3796176/93‑1 (MQ=255)
gtggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATc < 2:2971772/93‑1 (MQ=255)
gtggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATc < 1:5337658/93‑1 (MQ=255)
gtggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATc > 2:1185358/1‑93 (MQ=255)
gtggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATc < 1:6257531/93‑1 (MQ=255)
tggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCg > 1:6187191/1‑93 (MQ=255)
ggtgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGa < 2:1919240/93‑1 (MQ=255)
tgAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGc < 1:2922304/93‑1 (MQ=255)
gAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCt < 2:2231419/93‑1 (MQ=255)
aGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTg > 2:4232853/1‑93 (MQ=255)
aGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTg < 2:52544/93‑1 (MQ=255)
aGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTg > 2:170249/1‑93 (MQ=255)
|
GCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTG > NC_000913/3934186‑3934365
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GACGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCAAG > NC_000913/3934183‑3934369
|
GACGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCT > SRR4302533.174969/1‑94 (MQ=60)
CGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTAC > SRR4302533.5045285/1‑94 (MQ=60)
CAGTGGGTAATGCTGTGAAGATGGCTAGCCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAT < SRR4302533.3323194/94‑1 (MQ=60)
CAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAT < SRR4302533.2844368/94‑1 (MQ=60)
CAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACAT < SRR4302533.4561446/94‑1 (MQ=60)
AGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATT < SRR4302533.2107338/94‑1 (MQ=60)
AGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATT > SRR4302533.3586141/1‑94 (MQ=60)
AGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATT > SRR4302533.5179426/1‑94 (MQ=60)
AGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATT > SRR4302533.868707/1‑94 (MQ=60)
GTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTG < SRR4302533.5284651/94‑1 (MQ=60)
GTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTG < SRR4302533.6102718/94‑1 (MQ=60)
GTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTG > SRR4302533.1543917/1‑94 (MQ=60)
GGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCT > SRR4302533.1683801/1‑94 (MQ=60)
GGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTT < SRR4302533.2101868/94‑1 (MQ=60)
GTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTC > SRR4302533.4313147/1‑94 (MQ=60)
GTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTC > SRR4302533.2020767/1‑94 (MQ=60)
GTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGGGAAGTGGGGAGCTACATTtgttc > SRR4302533.1691185/1‑89 (MQ=60)
TAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCT > SRR4302533.2811387/1‑94 (MQ=60)
TGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGAT < SRR4302533.1258317/94‑1 (MQ=60)
GCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATA < SRR4302533.3671949/94‑1 (MQ=60)
GCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATA < SRR4302533.4385239/94‑1 (MQ=60)
CTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAA > SRR4302533.5292950/1‑94 (MQ=60)
TGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAAC > SRR4302533.6298954/1‑94 (MQ=60)
TGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAAC < SRR4302533.4179604/94‑1 (MQ=60)
GTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGGTTCTGATAACG < SRR4302533.2884016/94‑1 (MQ=60)
GTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACG < SRR4302533.1654302/94‑1 (MQ=60)
TGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCATGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGT > SRR4302533.5693871/1‑94 (MQ=60)
AAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTAC > SRR4302533.2333672/1‑94 (MQ=60)
AGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACT < SRR4302533.525196/94‑1 (MQ=60)
AGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACT < SRR4302533.122928/94‑1 (MQ=60)
AGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACT > SRR4302533.3131639/1‑94 (MQ=60)
AGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACT > SRR4302533.3738034/1‑94 (MQ=60)
GATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTG > SRR4302533.5753424/1‑94 (MQ=60)
ATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGG < SRR4302533.2947644/94‑1 (MQ=60)
TGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGG < SRR4302533.5816690/94‑1 (MQ=60)
TGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGG < SRR4302533.4811893/94‑1 (MQ=60)
GGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGC < SRR4302533.3704004/94‑1 (MQ=60)
GGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGC < SRR4302533.5530268/94‑1 (MQ=60)
CTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGG > SRR4302533.564028/1‑94 (MQ=60)
CTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGG > SRR4302533.1816738/1‑94 (MQ=60)
TAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGC > SRR4302533.5428438/1‑94 (MQ=60)
TAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGC > SRR4302533.506177/1‑94 (MQ=60)
CCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAA > SRR4302533.5755321/1‑94 (MQ=60)
CCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAA > SRR4302533.3245976/1‑94 (MQ=60)
CAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAA > SRR4302533.1729974/1‑94 (MQ=60)
CAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAA > SRR4302533.2939900/1‑94 (MQ=60)
AGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAT > SRR4302533.530524/1‑94 (MQ=60)
AGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAT < SRR4302533.5816861/94‑1 (MQ=60)
AGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAAT > SRR4302533.956145/1‑94 (MQ=60)
GCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCG < SRR4302533.5625874/94‑1 (MQ=60)
GCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCG < SRR4302533.4621291/94‑1 (MQ=60)
CGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGC > SRR4302533.1271642/1‑94 (MQ=60)
GAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCT > SRR4302533.4244117/1‑94 (MQ=60)
GAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCT < SRR4302533.2610237/94‑1 (MQ=60)
AACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTG > SRR4302533.5114547/1‑94 (MQ=60)
ACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGG > SRR4302533.895762/1‑94 (MQ=60)
ACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGG > SRR4302533.330743/1‑94 (MQ=60)
ACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGG > SRR4302533.1401812/1‑94 (MQ=60)
CATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGT > SRR4302533.1407070/1‑94 (MQ=60)
ATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTG > SRR4302533.2533666/1‑94 (MQ=60)
ATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTG > SRR4302533.1114071/1‑94 (MQ=60)
TCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGA > SRR4302533.3152809/1‑94 (MQ=60)
TCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGA < SRR4302533.1517208/94‑1 (MQ=60)
CCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGAT > SRR4302533.1519445/1‑94 (MQ=60)
CCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGAT > SRR4302533.158808/1‑94 (MQ=60)
CCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGAT < SRR4302533.5466337/94‑1 (MQ=60)
CCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATT < SRR4302533.2027229/94‑1 (MQ=60)
CGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTA > SRR4302533.1398073/1‑94 (MQ=60)
GTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTGCTGGGCGGCAAAATCGCTGGTGATTACA > SRR4302533.3778450/1‑94 (MQ=60)
GTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACA > SRR4302533.3679142/1‑94 (MQ=60)
GTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACA > SRR4302533.5873029/1‑94 (MQ=60)
TTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACAT > SRR4302533.5263375/1‑94 (MQ=60)
ATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCG > SRR4302533.960149/1‑94 (MQ=60)
ATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCG < SRR4302533.5006067/94‑1 (MQ=60)
ATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCG < SRR4302533.4173407/94‑1 (MQ=60)
TCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGC > SRR4302533.4048628/1‑94 (MQ=60)
CACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCG < SRR4302533.607011/94‑1 (MQ=60)
CACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCG < SRR4302533.623968/94‑1 (MQ=60)
CACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCG < SRR4302533.5961580/94‑1 (MQ=60)
CACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCG > SRR4302533.5554044/1‑94 (MQ=60)
CACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCG < SRR4302533.633075/94‑1 (MQ=60)
CTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAA > SRR4302533.232071/1‑94 (MQ=60)
TCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAG > SRR4302533.292379/1‑94 (MQ=60)
TTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAA < SRR4302533.3749320/94‑1 (MQ=60)
TGACCTCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAA < SRR4302533.2176315/94‑1 (MQ=60)
TGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAA < SRR4302533.2399298/94‑1 (MQ=60)
TGACCGCCAGGCAACGAAAAGTTAAGTGGTTAACTTCATTGCTTCTTATAACGTACTTGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAA < SRR4302533.2240166/94‑1 (MQ=60)
GACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAG < SRR4302533.812585/94‑1 (MQ=60)
GACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAG < SRR4302533.3773597/94‑1 (MQ=60)
GACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAG > SRR4302533.1344941/1‑94 (MQ=60)
GACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAG < SRR4302533.4140977/94‑1 (MQ=60)
ACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGC < SRR4302533.1422459/94‑1 (MQ=60)
CCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCG < SRR4302533.3345324/94‑1 (MQ=60)
CCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCG < SRR4302533.5201231/94‑1 (MQ=60)
CCGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCG < SRR4302533.5747523/94‑1 (MQ=60)
CGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGG < SRR4302533.2470666/94‑1 (MQ=60)
CGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGG < SRR4302533.1586042/94‑1 (MQ=60)
CGCCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGG > SRR4302533.5268311/1‑94 (MQ=60)
CCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGT < SRR4302533.6112990/94‑1 (MQ=60)
CCAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGG > SRR4302533.1832012/1‑94 (MQ=60)
CAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTG > SRR4302533.2117449/1‑94 (MQ=60)
CAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTG < SRR4302533.3390661/94‑1 (MQ=60)
CAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTG < SRR4302533.3626482/94‑1 (MQ=60)
CAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTG > SRR4302533.4016875/1‑94 (MQ=60)
CAGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTG > SRR4302533.1727951/1‑94 (MQ=60)
AGGCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGGGA > SRR4302533.2802534/1‑94 (MQ=60)
GCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAG < SRR4302533.5663342/94‑1 (MQ=60)
GCAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAG < SRR4302533.4396394/94‑1 (MQ=60)
CAACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGG > SRR4302533.3395235/1‑94 (MQ=60)
AACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGT < SRR4302533.2403863/94‑1 (MQ=60)
AACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGT > SRR4302533.4805984/1‑94 (MQ=60)
AACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGT > SRR4302533.1504016/1‑94 (MQ=60)
ACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTG < SRR4302533.1207443/94‑1 (MQ=60)
ACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTG < SRR4302533.4211965/94‑1 (MQ=60)
ACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTG < SRR4302533.5330427/94‑1 (MQ=60)
ACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTG > SRR4302533.3356055/1‑94 (MQ=60)
ACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTG < SRR4302533.364677/94‑1 (MQ=60)
ACGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTG > SRR4302533.3663397/1‑94 (MQ=60)
CGAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGC > SRR4302533.2209218/1‑94 (MQ=60)
CGAAAGGGGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGC > SRR4302533.5751802/1‑94 (MQ=60)
GAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCC > SRR4302533.2168101/1‑94 (MQ=60)
GAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCC < SRR4302533.646822/94‑1 (MQ=60)
GAAAGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCC > SRR4302533.4008276/1‑94 (MQ=60)
AGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAA > SRR4302533.905698/1‑94 (MQ=60)
AGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAA > SRR4302533.2459125/1‑94 (MQ=60)
AGGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAA > SRR4302533.5518133/1‑94 (MQ=60)
GGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAG > SRR4302533.4213415/1‑94 (MQ=60)
GGTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAG < SRR4302533.1921021/94‑1 (MQ=60)
GTGAAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGT < SRR4302533.1515830/94‑1 (MQ=60)
AAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAACATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTAT > SRR4302533.4461275/1‑94 (MQ=60)
AAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTAT < SRR4302533.40201/94‑1 (MQ=60)
AAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTAT < SRR4302533.4745491/94‑1 (MQ=60)
AAGTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTAT > SRR4302533.4249457/1‑94 (MQ=60)
GTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCTCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCG < SRR4302533.1521135/94‑1 (MQ=60)
GTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCG < SRR4302533.5369659/94‑1 (MQ=60)
GTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCG > SRR4302533.6224328/1‑94 (MQ=60)
GTGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCG < SRR4302533.6294953/94‑1 (MQ=60)
TGGTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGA < SRR4302533.648491/94‑1 (MQ=60)
GTGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGC < SRR4302533.2080134/94‑1 (MQ=60)
TGAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCT < SRR4302533.2940197/94‑1 (MQ=60)
GAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTG < SRR4302533.1974043/94‑1 (MQ=60)
GAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTG < SRR4302533.4237756/94‑1 (MQ=60)
GAGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTG < SRR4302533.2624060/94‑1 (MQ=60)
AGCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGC > SRR4302533.5684989/1‑94 (MQ=60)
GCTACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCA < SRR4302533.4689422/94‑1 (MQ=60)
TACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCAAG < SRR4302533.1509203/94‑1 (MQ=60)
TACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCAAG > SRR4302533.867150/1‑94 (MQ=60)
TACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCAAG < SRR4302533.582478/94‑1 (MQ=60)
TACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCAAG < SRR4302533.3878580/94‑1 (MQ=60)
TACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCAAG > SRR4302533.3202052/1‑94 (MQ=60)
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GACGCAGTGGGTAATGCTGTGAAGATGGCTAACCAGGCGAACATCCCGGTTATCACTCTTGACCGCCAGGCAACGAAAGGTGAAGTGGTGAGCCACATTGCTTCTGATAACGTACTGGGCGGCAAAATCGCTGGTGATTACATCGCGAAGAAAGCGGGTGAAGGTGCCAAAGTTATCGAGCTGCAAG > NC_000913/3934183‑3934369
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
