Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,937,523 A→G L239P (CTG→CCG)  yieO ← putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,937,5230AG99.6% 1680.7 / ‑4.1 519L239P (CTG→CCG) yieOputative transport protein
Reads supporting (aligned to +/- strand):  ref base A (0/2);  new base G (270/246);  total (270/249)
Fisher's exact test for biased strand distribution p-value = 2.29e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01

Only 100 of 534 total aligned reads displayed.

ACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGA  >  NC_000913/3937433‑3937612
                                                                                          |                                                                                         
aCGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGt                                                                                         <  2:354777/93‑1 (MQ=255)
  gATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTaa                                                                                       <  1:9199067/93‑1 (MQ=255)
   aTACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAAc                                                                                      >  2:6214889/1‑93 (MQ=255)
   aTACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAAc                                                                                      >  1:4741759/1‑93 (MQ=255)
   aTACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAAc                                                                                      >  2:3782108/1‑93 (MQ=255)
    tACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAccc                                                                                     >  1:9480618/1‑93 (MQ=255)
    tACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAAcc                                                                                     >  2:7151217/1‑93 (MQ=255)
     aCCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAAccc                                                                                    >  1:8444589/1‑93 (MQ=255)
     aCCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAAccc                                                                                    >  2:4755077/1‑93 (MQ=255)
       cGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGa                                                                                  <  1:6216919/93‑1 (MQ=255)
        gATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGAt                                                                                 >  2:2221827/1‑93 (MQ=255)
        gATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGAt                                                                                 >  1:6706341/1‑93 (MQ=255)
         aTCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATg                                                                                <  1:4432643/93‑1 (MQ=255)
          tCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGc                                                                               >  1:135490/1‑93 (MQ=255)
            gagaAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTg                                                                             >  1:4210148/1‑93 (MQ=255)
             agaAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTgg                                                                            <  1:3486193/93‑1 (MQ=255)
             agaAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTgg                                                                            >  2:8061688/1‑93 (MQ=255)
               aaaGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTg                                                                          >  2:3928745/1‑93 (MQ=255)
                   tGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACaa                                                                      >  1:1975100/1‑93 (MQ=255)
                    gCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAAt                                                                     >  1:2476169/1‑93 (MQ=255)
                     cGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAAtt                                                                    >  2:5765199/1‑93 (MQ=255)
                     cGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAAtt                                                                    <  2:9869467/93‑1 (MQ=255)
                      gggTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTa                                                                   >  1:4047615/1‑93 (MQ=255)
                       ggTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTAc                                                                  <  2:7848132/93‑1 (MQ=255)
                       ggTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTAc                                                                  <  2:1546143/93‑1 (MQ=255)
                         ttttAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCg                                                                <  2:6706277/93‑1 (MQ=255)
                         ttttAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCg                                                                >  2:8500776/1‑93 (MQ=255)
                          tttAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGTGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGt                                                               >  1:5869857/1‑93 (MQ=255)
                          tttAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGt                                                               >  2:7244787/1‑93 (MQ=255)
                           ttAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTc                                                              >  1:8925313/1‑93 (MQ=255)
                             aaataaatCTAATGAAATTAATGGTTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCaa                                                            <  1:6064034/93‑1 (MQ=255)
                             aaataaatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCaa                                                            <  2:6118744/93‑1 (MQ=255)
                             aaataaatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCaa                                                            <  1:7065902/93‑1 (MQ=255)
                             aaataaatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCaa                                                            <  1:9763675/93‑1 (MQ=255)
                             aaataaatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCaa                                                            >  1:2203946/1‑93 (MQ=255)
                              aataaatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAg                                                           >  1:6013938/1‑93 (MQ=255)
                              aataaatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAg                                                           >  1:2739181/1‑93 (MQ=255)
                                 aaatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCa                                                        >  2:9353523/1‑93 (MQ=255)
                                  aatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCaa                                                       <  2:5168058/93‑1 (MQ=255)
                                  aatCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCaa                                                       >  1:7927689/1‑93 (MQ=255)
                                   atCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTAAAGGCAAt                                                      >  1:8737310/1‑93 (MQ=255)
                                   atCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCAAGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAAt                                                      <  2:7967057/93‑1 (MQ=255)
                                     cTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATcc                                                    <  1:299921/93‑1 (MQ=255)
                                     cTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATcc                                                    <  1:1164473/93‑1 (MQ=255)
                                      tAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCa                                                   >  2:5461663/1‑93 (MQ=255)
                                      tAATGAAAATAATGGGTTTGGCGTGCGTCGTGAATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCa                                                   <  2:1204497/93‑1 (MQ=255)
                                          gAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTg                                               <  2:5807216/93‑1 (MQ=255)
                                            aaTTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGc                                             >  2:1495163/1‑93 (MQ=255)
                                            aaTTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGc                                             >  2:3346979/1‑93 (MQ=255)
                                             aTTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGAAATCCAGCTGGCg                                            >  1:5019786/1‑93 (MQ=255)
                                              ttAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGa                                           >  1:9051100/1‑93 (MQ=255)
                                               tAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGAGACAATTACCGTCAAGGCAATCCAGCTGGCGAc                                          >  1:9676676/1‑93 (MQ=255)
                                                aaTGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACa                                         >  1:7683647/1‑93 (MQ=255)
                                                aaTGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACa                                         <  2:9704976/93‑1 (MQ=255)
                                                aaTGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACa                                         <  1:7393803/93‑1 (MQ=255)
                                                 aTGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACaa                                        <  2:2108788/93‑1 (MQ=255)
                                                 aTGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACaa                                        >  1:5576313/1‑93 (MQ=255)
                                                  tGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAAt                                       >  2:825139/1‑93 (MQ=255)
                                                     gTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCtt                                    >  1:6286552/1‑93 (MQ=255)
                                                     gTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCtt                                    >  1:3297614/1‑93 (MQ=255)
                                                      tttGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCttt                                   <  2:5668015/93‑1 (MQ=255)
                                                      tttGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCttt                                   <  1:10017660/93‑1 (MQ=255)
                                                      tttGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCttt                                   <  2:8679428/93‑1 (MQ=255)
                                                      tttGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCttt                                   >  2:9032220/1‑93 (MQ=255)
                                                       ttGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCtttt                                  <  1:369928/93‑1 (MQ=255)
                                                        tGGCGTGCTTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTc                                 >  1:5715941/1‑93 (MQ=255)
                                                        tGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTc                                 >  1:5199787/1‑93 (MQ=255)
                                                         ggCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTcc                                <  1:1679459/93‑1 (MQ=255)
                                                              gcgtCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGaa                           >  2:2841311/1‑93 (MQ=255)
                                                               cgtcgtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAAt                          <  2:1855653/93‑1 (MQ=255)
                                                               cgtcgtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAAt                          <  2:2483305/93‑1 (MQ=255)
                                                                gtcgtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATa                         >  2:490431/1‑93 (MQ=255)
                                                                gtcgtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATa                         <  1:4834864/93‑1 (MQ=255)
                                                                gtcgtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATa                         <  1:2834020/93‑1 (MQ=255)
                                                                gtcgtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATa                         <  2:9218332/93‑1 (MQ=255)
                                                                 tcgtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAg                        >  1:6551510/1‑93 (MQ=255)
                                                                 tcgtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAg                        <  2:6999856/93‑1 (MQ=255)
                                                                  cgtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGc                       >  2:1004959/1‑93 (MQ=255)
                                                                   gtGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGct                      >  2:7687859/1‑93 (MQ=255)
                                                                    tGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAGctc                     >  1:1547785/1‑93 (MQ=255)
                                                                    tGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGctc                     >  1:1480582/1‑93 (MQ=255)
                                                                    tGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGctc                     <  2:2623811/93‑1 (MQ=255)
                                                                     gCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGctct                    >  2:5025691/1‑93 (MQ=255)
                                                                      cATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTa                   <  2:9475147/93‑1 (MQ=255)
                                                                        tGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTAtt                 >  2:451044/1‑93 (MQ=255)
                                                                        tGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTAtt                 <  1:6992972/93‑1 (MQ=255)
                                                                          gagaATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTcc               >  2:7412596/1‑93 (MQ=255)
                                                                          gagaAGATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTcc               <  2:3279563/93‑1 (MQ=255)
                                                                            gaATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGc             >  1:4602221/1‑93 (MQ=255)
                                                                            gaATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGc             >  2:41893/1‑93 (MQ=255)
                                                                               tataGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTg          <  1:7517519/93‑1 (MQ=255)
                                                                               tataGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTg          >  1:5091710/1‑93 (MQ=255)
                                                                               tataGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTg          <  2:3187022/93‑1 (MQ=255)
                                                                               tataGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTg          >  1:5348897/1‑93 (MQ=255)
                                                                                 taGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTgag        <  2:6374751/93‑1 (MQ=255)
                                                                                 taGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTgag        >  2:8820145/1‑93 (MQ=255)
                                                                                  agagAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTgaga       <  2:8387206/93‑1 (MQ=255)
                                                                                   gagaAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTgagaa      <  2:5392161/93‑1 (MQ=255)
                                                                                    agaAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTgagaag     <  1:8156301/93‑1 (MQ=255)
                                                                                     gaAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTgagaaga    >  2:5968338/1‑93 (MQ=255)
                                                                                          |                                                                                         
ACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGA  >  NC_000913/3937433‑3937612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 285 total aligned reads displayed.
CCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACAA  >  NC_000913/3937430‑3937616
                                                                                             |                                                                                             
CCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGCGAAGCG                                                                                               >  SRR4302540.5499180/1‑94 (MQ=60)
CCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCG                                                                                               <  SRR4302540.3541552/94‑1 (MQ=60)
 CTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGG                                                                                              >  SRR4302540.5654791/1‑94 (MQ=60)
   ACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTA                                                                                            >  SRR4302540.4676255/1‑94 (MQ=60)
     GATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAAC                                                                                          <  SRR4302540.9309419/94‑1 (MQ=60)
     GATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAAC                                                                                          >  SRR4302540.4792364/1‑94 (MQ=60)
      ATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACC                                                                                         <  SRR4302540.9678550/94‑1 (MQ=60)
      ATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACC                                                                                         >  SRR4302540.3664696/1‑94 (MQ=60)
      ATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACC                                                                                         >  SRR4302540.5019018/1‑94 (MQ=60)
       TACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCC                                                                                        <  SRR4302540.8080655/94‑1 (MQ=60)
       TACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCC                                                                                        >  SRR4302540.6780726/1‑94 (MQ=60)
        ACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCG                                                                                       >  SRR4302540.2604591/1‑94 (MQ=60)
         CCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGC                                                                                      >  SRR4302540.3189929/1‑94 (MQ=60)
          CGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGAT                                                                                     <  SRR4302540.7097781/94‑1 (MQ=60)
          CGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGAT                                                                                     >  SRR4302540.6780354/1‑94 (MQ=60)
          CGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGAT                                                                                     <  SRR4302540.7368591/94‑1 (MQ=60)
          CGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGAT                                                                                     <  SRR4302540.6286088/94‑1 (MQ=60)
          CGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGAT                                                                                     <  SRR4302540.6104276/94‑1 (MQ=60)
           GATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCggagg                                                                                    >  SRR4302540.1660863/1‑89 (MQ=60)
            ATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGC                                                                                   >  SRR4302540.374407/1‑94 (MQ=60)
            ATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGC                                                                                   >  SRR4302540.136908/1‑94 (MQ=60)
            ATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGC                                                                                   >  SRR4302540.2774349/1‑94 (MQ=60)
            ATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGC                                                                                   <  SRR4302540.4480665/94‑1 (MQ=60)
             TCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCT                                                                                  <  SRR4302540.2845675/94‑1 (MQ=60)
             TCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCT                                                                                  <  SRR4302540.622444/94‑1 (MQ=60)
             TCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCT                                                                                  >  SRR4302540.6061806/1‑94 (MQ=60)
              CGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTG                                                                                 <  SRR4302540.5809956/94‑1 (MQ=60)
              CGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTG                                                                                 >  SRR4302540.4255985/1‑94 (MQ=60)
               GAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGG                                                                                >  SRR4302540.5825237/1‑94 (MQ=60)
               GAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGG                                                                                <  SRR4302540.4837808/94‑1 (MQ=60)
               GAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGG                                                                                >  SRR4302540.7800356/1‑94 (MQ=60)
               GAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGG                                                                                >  SRR4302540.1192940/1‑94 (MQ=60)
                AGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGT                                                                               <  SRR4302540.6268544/94‑1 (MQ=60)
                AGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGT                                                                               <  SRR4302540.3524158/94‑1 (MQ=60)
                 GAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTG                                                                              >  SRR4302540.674395/1‑94 (MQ=60)
                 GAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTG                                                                              >  SRR4302540.4621517/1‑94 (MQ=60)
                 GAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTG                                                                              >  SRR4302540.7932996/1‑94 (MQ=60)
                 GAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGGG                                                                              >  SRR4302540.674394/1‑94 (MQ=60)
                  AAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGA                                                                             >  SRR4302540.2761424/1‑94 (MQ=60)
                   AAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGAC                                                                            >  SRR4302540.5122676/1‑94 (MQ=60)
                    AGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACA                                                                           >  SRR4302540.9820236/1‑94 (MQ=60)
                      TGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAAT                                                                         >  SRR4302540.768005/1‑94 (MQ=60)
                        CGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTA                                                                       <  SRR4302540.5585640/94‑1 (MQ=60)
                        CGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTA                                                                       >  SRR4302540.4091258/1‑94 (MQ=60)
                         GGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGAGACAATCAC                                                                      >  SRR4302540.6083193/1‑94 (MQ=60)
                          GGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACC                                                                     <  SRR4302540.2841764/94‑1 (MQ=60)
                          GGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACC                                                                     >  SRR4302540.4047844/1‑94 (MQ=60)
                          GGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACC                                                                     <  SRR4302540.2020645/94‑1 (MQ=60)
                          GGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACC                                                                     >  SRR4302540.8252622/1‑94 (MQ=60)
                          GGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACC                                                                     <  SRR4302540.3423917/94‑1 (MQ=60)
                           GTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCG                                                                    <  SRR4302540.10102851/94‑1 (MQ=60)
                            TTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGTGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGT                                                                   >  SRR4302540.5934740/1‑94 (MQ=60)
                            TTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGT                                                                   >  SRR4302540.916457/1‑94 (MQ=60)
                            TTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGC                                                                   >  SRR4302540.7114845/1‑94 (MQ=60)
                             TTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTC                                                                  <  SRR4302540.8581435/94‑1 (MQ=60)
                             TTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTC                                                                  >  SRR4302540.9029078/1‑94 (MQ=60)
                             TTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTC                                                                  >  SRR4302540.4962854/1‑94 (MQ=60)
                              ttctctccATCTAATGAACTTAATGGGTTTGGCGTGCGTCGTGCATGGAGCATATAGCGAAGCGGTACCCCGATGCTGGTGACAATTACCGTCA                                                                 <  SRR4302540.9093157/86‑1 (MQ=60)
                               TAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAA                                                                >  SRR4302540.2227756/1‑94 (MQ=60)
                                AAATAAATCTAATGAAATTAATGGTTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAG                                                               <  SRR4302540.6131447/94‑1 (MQ=60)
                                AAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAG                                                               >  SRR4302540.6080628/1‑94 (MQ=60)
                                AAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAG                                                               <  SRR4302540.4713012/94‑1 (MQ=60)
                                AAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAG                                                               <  SRR4302540.6131448/94‑1 (MQ=60)
                                AAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAG                                                               <  SRR4302540.9878182/94‑1 (MQ=60)
                                AAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAG                                                               <  SRR4302540.7144486/94‑1 (MQ=60)
                                 AATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTTAAGG                                                              >  SRR4302540.5511351/1‑94 (MQ=60)
                                 AATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGG                                                              >  SRR4302540.6638265/1‑94 (MQ=60)
                                 AATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGG                                                              <  SRR4302540.894453/94‑1 (MQ=60)
                                  ATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGC                                                             >  SRR4302540.4825859/1‑94 (MQ=60)
                                     AATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAAT                                                          >  SRR4302540.1921008/1‑94 (MQ=60)
                                     AATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTAAAGGCAAT                                                          >  SRR4302540.8838752/1‑94 (MQ=60)
                                      ATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATC                                                         <  SRR4302540.4782831/94‑1 (MQ=60)
                                      ATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATC                                                         <  SRR4302540.2245956/94‑1 (MQ=60)
                                       TCTAATGAAATTAATGGGCTTGGCGTGCGTAGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCC                                                        >  SRR4302540.8838097/1‑94 (MQ=60)
                                        TTAATGAAATTAATGGGTTTTGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCA                                                       <  SRR4302540.5256489/94‑1 (MQ=60)
                                        CTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCA                                                       >  SRR4302540.1359220/1‑94 (MQ=60)
                                        CTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCA                                                       <  SRR4302540.5256490/94‑1 (MQ=60)
                                        CTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCA                                                       <  SRR4302540.1176556/94‑1 (MQ=60)
                                         TAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAG                                                      >  SRR4302540.9518012/1‑94 (MQ=60)
                                          AATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGC                                                     >  SRR4302540.4266756/1‑94 (MQ=60)
                                          AATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGC                                                     >  SRR4302540.6123636/1‑94 (MQ=60)
                                           ATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCT                                                    >  SRR4302540.1696976/1‑94 (MQ=60)
                                            TGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTG                                                   <  SRR4302540.2874277/94‑1 (MQ=60)
                                            TGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTG                                                   <  SRR4302540.6892759/94‑1 (MQ=60)
                                            TGAAATTAAGGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTG                                                   <  SRR4302540.6892761/94‑1 (MQ=60)
                                             GAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGG                                                  <  SRR4302540.1473918/94‑1 (MQ=60)
                                             GAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGG                                                  <  SRR4302540.6433643/94‑1 (MQ=60)
                                              AAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGC                                                 <  SRR4302540.955853/94‑1 (MQ=60)
                                              AAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGC                                                 <  SRR4302540.1196821/94‑1 (MQ=60)
                                               AATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCG                                                <  SRR4302540.889234/94‑1 (MQ=60)
                                                ATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGA                                               >  SRR4302540.9159754/1‑94 (MQ=60)
                                                 TTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGAC                                              >  SRR4302540.4201773/1‑94 (MQ=60)
                                                 TTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGAGACAATTACCGTCAAGGCAATCCAGCTGGCGAC                                              >  SRR4302540.9790532/1‑94 (MQ=60)
                                                   tgttggtttatagttCGTCGTGCATGGAGAATATAGAGAGGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCCGCTGGCGACAA                                            <  SRR4302540.7476186/79‑1 (MQ=60)
                                                   AATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAA                                            >  SRR4302540.940222/1‑94 (MQ=60)
                                                    ATGGGTTTGGGGTGCGTCGTGCATGGAGAATATGGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAAT                                           <  SRR4302540.9796500/94‑1 (MQ=60)
                                                    ATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAAT                                           >  SRR4302540.7399020/1‑94 (MQ=60)
                                                      GGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCT                                         <  SRR4302540.9240093/94‑1 (MQ=60)
                                                       GGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTT                                        >  SRR4302540.3333707/1‑94 (MQ=60)
                                                       GGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTT                                        >  SRR4302540.10056574/1‑94 (MQ=60)
                                                        GTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTT                                       <  SRR4302540.2727206/94‑1 (MQ=60)
                                                        GTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTT                                       >  SRR4302540.2195624/1‑94 (MQ=60)
                                                         TTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTATCCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTT                                      <  SRR4302540.9837347/94‑1 (MQ=60)
                                                         TTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTT                                      <  SRR4302540.10134259/94‑1 (MQ=60)
                                                          TTGGCGTGCTTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTC                                     >  SRR4302540.5778860/1‑94 (MQ=60)
                                                          TTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTC                                     <  SRR4302540.6367211/94‑1 (MQ=60)
                                                          TTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTC                                     <  SRR4302540.373746/94‑1 (MQ=60)
                                                          TTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTC                                     >  SRR4302540.8741591/1‑94 (MQ=60)
                                                          TTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTC                                     <  SRR4302540.5951451/94‑1 (MQ=60)
                                                          TTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCCTTTC                                     <  SRR4302540.3229060/94‑1 (MQ=60)
                                                           TGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTTACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCC                                    >  SRR4302540.5699864/1‑94 (MQ=60)
                                                           TGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCC                                    <  SRR4302540.3158435/94‑1 (MQ=60)
                                                           TGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCC                                    <  SRR4302540.5774637/94‑1 (MQ=60)
                                                           TGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCC                                    <  SRR4302540.7553957/94‑1 (MQ=60)
                                                           TGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCC                                    <  SRR4302540.7870415/94‑1 (MQ=60)
                                                            GGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACACTTACCGTCAAGGGAATCCAGCTGGCGACAATatgttaca                                   >  SRR4302540.9309878/1‑86 (MQ=60)
                                                            GGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCC                                   >  SRR4302540.7711298/1‑94 (MQ=60)
                                                            GGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCC                                   <  SRR4302540.57139/94‑1 (MQ=60)
                                                            GGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCC                                   <  SRR4302540.1697690/94‑1 (MQ=60)
                                                            GGCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCC                                   >  SRR4302540.2421118/1‑94 (MQ=60)
                                                             GCGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCC                                  <  SRR4302540.6336050/94‑1 (MQ=60)
                                                              CGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCG                                 >  SRR4302540.8475327/1‑94 (MQ=60)
                                                              CGTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCG                                 >  SRR4302540.1068205/1‑94 (MQ=60)
                                                               GTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGA                                <  SRR4302540.198618/94‑1 (MQ=60)
                                                               GTGCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGA                                >  SRR4302540.4602800/1‑94 (MQ=60)
                                                               GTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGA                                <  SRR4302540.6510592/94‑1 (MQ=60)
                                                                 GCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAAT                              <  SRR4302540.3407626/94‑1 (MQ=60)
                                                                 GCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAAT                              <  SRR4302540.988007/94‑1 (MQ=60)
                                                                 GCGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAAT                              <  SRR4302540.4649995/94‑1 (MQ=60)
                                                                  CGTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATA                             <  SRR4302540.6916313/94‑1 (MQ=60)
                                                                   GTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAG                            <  SRR4302540.4886659/94‑1 (MQ=60)
                                                                   GTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAG                            >  SRR4302540.1969129/1‑94 (MQ=60)
                                                                   GTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGCCAATCTTTTCCCCGAATAG                            <  SRR4302540.5322904/94‑1 (MQ=60)
                                                                   GTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAG                            >  SRR4302540.6624175/1‑94 (MQ=60)
                                                                   GTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAG                            <  SRR4302540.2864669/94‑1 (MQ=60)
                                                                   GTCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAG                            >  SRR4302540.1560565/1‑94 (MQ=60)
                                                                    TCGTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGC                           >  SRR4302540.8649982/1‑94 (MQ=60)
                                                                      GTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTC                         >  SRR4302540.1564855/1‑94 (MQ=60)
                                                                      GTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTC                         >  SRR4302540.3435173/1‑94 (MQ=60)
                                                                      GTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTC                         >  SRR4302540.1530429/1‑94 (MQ=60)
                                                                      GTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTC                         >  SRR4302540.1496802/1‑94 (MQ=60)
                                                                      GTGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCCTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTC                         <  SRR4302540.1418756/94‑1 (MQ=60)
                                                                       TGCATGGAGAATATAGAGAAGCGGTAACCCTATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCT                        <  SRR4302540.5212110/94‑1 (MQ=60)
                                                                       TGCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCT                        >  SRR4302540.8219934/1‑94 (MQ=60)
                                                                        gacTGGAGAATATAGAGAAGCGGTAACCCGATGCTGGGGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTA                       <  SRR4302540.5207809/91‑1 (MQ=60)
                                                                        GCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTA                       >  SRR4302540.8510047/1‑94 (MQ=60)
                                                                        GCATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTA                       <  SRR4302540.5207810/94‑1 (MQ=60)
                                                                         CATGGAGAATATAGAGAAGCGGTACCCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTAT                      <  SRR4302540.1027893/94‑1 (MQ=60)
                                                                          ATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATT                     >  SRR4302540.6344661/1‑94 (MQ=60)
                                                                          ATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTTGCGACAATCTTTTCCCCGAATAGCTCTATT                     <  SRR4302540.2529397/94‑1 (MQ=60)
                                                                          ATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATT                     >  SRR4302540.3071484/1‑94 (MQ=60)
                                                                          ATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATT                     >  SRR4302540.2912791/1‑94 (MQ=60)
                                                                          ATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATT                     >  SRR4302540.972324/1‑94 (MQ=60)
                                                                          ATGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATT                     >  SRR4302540.1565883/1‑94 (MQ=60)
                                                                          ATGGAGAATATAGAGAAGCGATAACCCGATGCTGGTGACAAGTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATT                     <  SRR4302540.1436623/94‑1 (MQ=60)
                                                                           TGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTC                    >  SRR4302540.5105480/1‑94 (MQ=60)
                                                                           TGGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTC                    >  SRR4302540.6312977/1‑94 (MQ=60)
                                                                            GGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCC                   >  SRR4302540.7455690/1‑94 (MQ=60)
                                                                            GGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCC                   <  SRR4302540.5346838/94‑1 (MQ=60)
                                                                            GGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCC                   >  SRR4302540.3871188/1‑94 (MQ=60)
                                                                            GGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCC                   <  SRR4302540.1844469/94‑1 (MQ=60)
                                                                            GGAGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCC                   <  SRR4302540.2193486/94‑1 (MQ=60)
                                                                              AGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGC                 >  SRR4302540.4651672/1‑94 (MQ=60)
                                                                              AGAATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGC                 >  SRR4302540.5567358/1‑94 (MQ=60)
                                                                               GAATATAGAGAGTCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCT                <  SRR4302540.4388058/94‑1 (MQ=60)
                                                                                AATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTT               <  SRR4302540.8149348/94‑1 (MQ=60)
                                                                                AATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTA               <  SRR4302540.9281364/94‑1 (MQ=60)
                                                                                 ATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTG              >  SRR4302540.4152757/1‑94 (MQ=60)
                                                                                 ATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTG              <  SRR4302540.9600579/94‑1 (MQ=60)
                                                                                 ATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTG              >  SRR4302540.5146789/1‑94 (MQ=60)
                                                                                 ATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTG              <  SRR4302540.7591882/94‑1 (MQ=60)
                                                                                 ATATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTG              <  SRR4302540.5060531/94‑1 (MQ=60)
                                                                                  TATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGA             <  SRR4302540.7601579/94‑1 (MQ=60)
                                                                                  TATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGA             <  SRR4302540.7601578/94‑1 (MQ=60)
                                                                                  TATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGA             <  SRR4302540.9136282/94‑1 (MQ=60)
                                                                                   ATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAG            <  SRR4302540.9020095/94‑1 (MQ=60)
                                                                                   ATAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAG            <  SRR4302540.2368890/94‑1 (MQ=60)
                                                                                    TAGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGA           >  SRR4302540.2991284/1‑94 (MQ=60)
                                                                                     AGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAA          <  SRR4302540.3676773/94‑1 (MQ=60)
                                                                                     AGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAA          <  SRR4302540.5056832/94‑1 (MQ=60)
                                                                                     AGAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAA          <  SRR4302540.7099990/94‑1 (MQ=60)
                                                                                     AGAGAAGCGGTAACCCGATGCTGGCGACAATTACCGTCAAGGCAATCCAGCTGGCGACAAGCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAA          >  SRR4302540.9122836/1‑94 (MQ=60)
                                                                                      GAGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAG         <  SRR4302540.4412947/94‑1 (MQ=60)
                                                                                       AGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGA        <  SRR4302540.5089525/94‑1 (MQ=60)
                                                                                       AGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGCGAATA        >  SRR4302540.7698593/1‑94 (MQ=60)
                                                                                       AGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGA        >  SRR4302540.3846352/1‑94 (MQ=60)
                                                                                       AGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGA        <  SRR4302540.8250997/94‑1 (MQ=60)
                                                                                       AGAAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGA        <  SRR4302540.579879/94‑1 (MQ=60)
                                                                                         AAGCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGA      <  SRR4302540.7771988/94‑1 (MQ=60)
                                                                                           GCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAAC    <  SRR4302540.5496071/94‑1 (MQ=60)
                                                                                           GCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAAC    <  SRR4302540.5949638/94‑1 (MQ=60)
                                                                                           GCGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAAC    <  SRR4302540.4874453/94‑1 (MQ=60)
                                                                                            CGGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACA   >  SRR4302540.4649439/1‑94 (MQ=60)
                                                                                             GGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACAA  >  SRR4302540.3882464/1‑94 (MQ=60)
                                                                                             GGTAACCCGATGCTGGTGACAATTACCGTCAAGGTAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACAA  <  SRR4302540.6222944/94‑1 (MQ=60)
                                                                                             GGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACAA  >  SRR4302540.7881764/1‑94 (MQ=60)
                                                                                             GGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACAA  >  SRR4302540.5884459/1‑94 (MQ=60)
                                                                                             GGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACAA  <  SRR4302540.1473455/94‑1 (MQ=60)
                                                                                             GGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACAA  >  SRR4302540.2536891/1‑94 (MQ=60)
                                                                                             GGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACAA  <  SRR4302540.7397153/94‑1 (MQ=60)
                                                                                             |                                                                                             
CCTACGATACCGATCGAGAAAGTGCGGGTTTTAAATAAATCTAATGAAATTAATGGGTTTGGCGTGCGTCGTGCATGGAGAATATAGAGAAGCAGTAACCCGATGCTGGTGACAATTACCGTCAAGGCAATCCAGCTGGCGACAATCTTTTCCCCGAATAGCTCTATTCCGCTTGAGAAGAGAACAA  >  NC_000913/3937430‑3937616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑