Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,957,092 |
+CC |
intergenic (+26/+58) |
ilvC → / ← ppiC |
ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,957,091 | 1 | . | C | 93.7%
| 471.4
/ 29.8
| 189 | intergenic (+25/+59) | ilvC/ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
| Reads supporting (aligned to +/- strand): ref base . (0/12); new base C (10/167); total (10/179) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | NC_000913 | 3,957,091 | 2 | . | C | 93.7%
| 470.8
/ 29.8
| 189 | intergenic (+25/+59) | ilvC/ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
| Reads supporting (aligned to +/- strand): ref base . (0/12); new base C (10/167); total (10/179) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 230 total aligned reads displayed.
TTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AA‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAAT > NC_000913/3956999‑3957173
||
ttGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑a < 1:8599176/93‑1 (MQ=255)
gAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑cc < 1:4075361/93‑2 (MQ=255)
gAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑cc < 2:8340637/93‑2 (MQ=255)
aGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑ccc < 2:5711287/93‑3 (MQ=255)
gCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑ccct < 2:816987/93‑1 (MQ=255)
cAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑Ccctc < 2:3477725/93‑1 (MQ=255)
aggtaggtAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑Ccctct < 2:1708098/93‑2 (MQ=255)
ggtaggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑Ccctctc < 1:6459310/93‑3 (MQ=255)
gtaggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑C‑‑Ccctctcc > 1:8692664/1‑90 (MQ=255)
gtaggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑Ccctctcc < 1:6701713/93‑4 (MQ=255)
gtaggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑Ccctctcc < 2:6213163/93‑4 (MQ=255)
agtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCcac < 1:5209928/92‑1 (MQ=38)
gtaAGAAACTGCGCGGCTATATTACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCcaca < 2:8265546/93‑1 (MQ=37)
gtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCcaca < 2:333625/93‑1 (MQ=38)
taAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACag < 1:5192420/93‑1 (MQ=37)
aGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACaggg < 2:278000/93‑1 (MQ=37)
aGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACaggg < 1:8860898/93‑1 (MQ=37)
aGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACaggg < 2:9337670/93‑1 (MQ=37)
gAAACTGCGCGGCTATATGCCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACaggga < 2:4496475/93‑1 (MQ=37)
gAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCC‑‑ACCCTCTCCCCCagggg > 2:1562846/1‑92 (MQ=37)
aCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACagggaga‑g < 2:2146636/93‑1 (MQ=37)
cTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACagggaga‑gg < 1:9120349/93‑1 (MQ=25)
tGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACagggaga‑ggg < 2:4134173/93‑1 (MQ=25)
ggCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAAGGTGA‑GGGAGgaa > 2:10033437/1‑93 (MQ=25)
gCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGaaaa < 2:4333432/93‑1 (MQ=21)
atatGACAGATATGAAACGTATTGCTTTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAacac < 1:5775982/93‑1 (MQ=21)
tatGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCCCCCCCCG‑‑ACCCCCTCCCCCAGGGGGG‑GGGGGAAAacacc > 2:6973202/1‑92 (MQ=21)
tGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑a < 1:5587383/93‑1 (MQ=21)
tGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑a < 1:8158037/93‑1 (MQ=21)
taCAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑aa < 1:8483600/92‑1 (MQ=21)
gACAGATATGAAACGTATTGCTTTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑aa < 1:8610907/93‑1 (MQ=21)
gACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑aa < 2:9618785/93‑1 (MQ=21)
aGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCCCAGGGAGA‑GGGAGAAAACTCT‑C‑AA‑ggc < 1:2902511/93‑3 (MQ=21)
gATGTGAAACGTATTGCTGTTGCGGTTTAAGTGCGCGCGTATCCCCTCCCCCCGTCC‑‑CTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AA‑ggcc < 2:7245091/93‑4 (MQ=18)
gATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AA‑ggcc < 2:9719709/93‑4 (MQ=21)
gATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AA‑ggcc < 1:28121/93‑4 (MQ=21)
gATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCC‑‑AACCTCTCCCACCAGGAGA‑GGGAGAAAAAACT‑C‑aaagac > 1:9967462/1‑89 (MQ=21)
atatGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCCCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AA‑ggcct > 2:7989286/1‑89 (MQ=21)
atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTtc < 1:7966471/93‑1 (MQ=18)
atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTtc < 1:286641/93‑1 (MQ=18)
atGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTtc < 2:2355872/93‑1 (MQ=18)
tGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTtct < 2:6938024/93‑1 (MQ=18)
tGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTtct < 1:4751717/93‑1 (MQ=18)
aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTcc < 1:7781114/93‑1 (MQ=18)
aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTcc < 2:6648727/93‑1 (MQ=18)
aaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCt < 2:2903768/93‑1 (MQ=18)
aaCGTATTGCTGTTGCGGGTTAAGCGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCt < 1:5855060/93‑1 (MQ=18)
aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTg < 2:3024789/93‑1 (MQ=18)
aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTg < 1:2671535/93‑1 (MQ=18)
aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTg < 2:5072294/93‑1 (MQ=18)
ctATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGCCC‑‑CTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGga < 1:158989/92‑1 (MQ=18)
tATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACCGGGAGA‑GGGAGAAAACACT‑CAAA‑GCCTTCTCCTGgag > 2:3559691/1‑93 (MQ=18)
tATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCCCACCCCC‑‑ACCCCCTCCCCCAAGGGGG‑GGGAGGAAACAATCC‑AA‑GCCTTCTCCTGgag > 2:6832818/1‑93 (MQ=16)
aTTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGgaga < 1:141602/93‑1 (MQ=18)
aTTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGgaga < 2:174216/93‑1 (MQ=18)
ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGaa < 1:945397/93‑1 (MQ=18)
ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGaa < 1:230901/93‑1 (MQ=18)
ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGaa < 2:2000617/93‑1 (MQ=18)
ttGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGaa < 1:3809060/93‑1 (MQ=18)
tGCTGTGGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAg < 2:9070318/93‑1 (MQ=18)
gTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGC‑AC‑CTCTCCCACAGGGGGA‑GGGAGAAAACACT‑CAAA‑GCCTTCTCCTGGAGAAGGGCt > 1:6908493/1‑93 (MQ=18)
gTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCt < 1:9612040/93‑1 (MQ=18)
ttGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCtt < 1:3866219/93‑1 (MQ=18)
ttGCGGGTTAAGTGCGCACTGATACCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTTGAGAAGGCCtt < 2:6915725/93‑1 (MQ=18)
tGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTg < 1:5937716/93‑1 (MQ=18)
tGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTg < 2:2595174/93‑1 (MQ=18)
tGCGCGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTg < 2:2871116/93‑1 (MQ=18)
cGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCt < 1:4669408/93‑1 (MQ=18)
ggTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTAt < 2:407435/93‑1 (MQ=18)
ggTTAAGTGCGCGCTGATGCCCCCCCCCCC‑‑ACCCCCCCCCCCCCGGAGAGGGGGGAAAAAAAC‑A‑AA‑ACCCTCTCCTTGAGAAAGCCTTGCTAt > 2:4859313/1‑93 (MQ=255)
gTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTAtt < 2:9805315/93‑1 (MQ=18)
gTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTAtt < 1:2200990/93‑1 (MQ=18)
gTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTAtt < 1:9285507/93‑1 (MQ=18)
gTTAAGTGCGCGCTGATGCCCTCACCACG‑‑ACCCTCTACCCCGGGGAGA‑GGGAGAACACACT‑C‑AAGGCCTTCTCCTGGAGAGGGCCTTGCTAtt < 2:8954127/93‑1 (MQ=18)
aaGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGt < 2:8550083/93‑1 (MQ=18)
gTGCGCGCTGTTGCCGTCACCCCG‑‑ACCCTCCCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTg < 1:7317845/93‑1 (MQ=18)
tGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGc < 2:3893418/93‑1 (MQ=21)
gcgcgcTGATGCCCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCg < 1:8153131/93‑1 (MQ=21)
gcgcgcTGATGCCCTCACCCCGCCC‑‑CTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCg < 1:1951231/93‑1 (MQ=18)
gcgcgcTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCg < 2:7551157/93‑1 (MQ=21)
cgcgcTCATGCCCTCACCCCGCCC‑‑CTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCgg < 2:2025144/93‑1 (MQ=18)
gcgcTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGt < 1:1024307/93‑1 (MQ=21)
gcTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTAc < 2:6677229/93‑1 (MQ=21)
gcTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTAc < 1:6452810/93‑1 (MQ=21)
cTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACa < 1:1512254/93‑1 (MQ=21)
cTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACa < 1:3367753/93‑1 (MQ=21)
cTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACa < 2:1006398/93‑1 (MQ=21)
tGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGATAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAg < 1:4525430/93‑1 (MQ=25)
gATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGc < 2:3625155/93‑1 (MQ=25)
tGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAc < 1:4223592/93‑1 (MQ=25)
cccTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCt < 1:701308/93‑1 (MQ=25)
ccTCCCCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAACCACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCtt < 1:2790468/93‑1 (MQ=25)
cTCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTa < 2:4734208/93‑1 (MQ=37)
tCACCCCG‑‑ACCCTCTCCTACAGGGGGA‑GGGAGAAAACAAT‑C‑AAGGCCTTCTCCTGGAGAAAGCCTTGCTATTAGTTGCGGTTCAGCGCCttca > 2:1313969/1‑91 (MQ=255)
tCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGATAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa < 1:9710794/93‑1 (MQ=37)
tCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa < 2:4304431/93‑1 (MQ=37)
tCACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTaa > 2:5229040/1‑93 (MQ=37)
cACCCCG‑‑ACCCTCTCCCCCCGGGGGG‑GGGGGGAAACAAT‑CAAA‑GCCCTCTCCTGGAGAAAGGCTTGCTATTAGTTTCGGTACAGCACCTTAat > 2:3854670/1‑93 (MQ=255)
cACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAat > 1:5356049/1‑93 (MQ=37)
cACCCCG‑‑ACCCTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAat < 2:6740337/93‑1 (MQ=37)
||
TTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CTCTCCCACAGGGAGA‑GGGAGAAAACACT‑C‑AA‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAAT > NC_000913/3956999‑3957173
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AA‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATC > NC_000913/3956999‑3957184
|
TTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑C < SRR4302540.8699127/94‑1 (MQ=60)
ATGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑C < SRR4302540.8699128/94‑1 (MQ=60)
TGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CC < SRR4302540.5098603/94‑1 (MQ=60)
GAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CCC < SRR4302540.4119288/94‑1 (MQ=60)
GAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CCC < SRR4302540.4119289/94‑1 (MQ=60)
AGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CCCT < SRR4302540.6763199/94‑1 (MQ=60)
ggtctcggcattcctgctgaaccgctcttccgatctagcgcttCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CCCTC < SRR4302540.2809622/51‑1 (MQ=60)
GAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑Ccctct < SRR4302540.10085278/94‑6 (MQ=60)
CAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCG‑‑A‑‑Cccccc > SRR4302540.852748/1‑89 (MQ=60)
GGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCC < SRR4302540.6531206/94‑1 (MQ=60)
GGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑Ccccctcc > SRR4302540.3650902/1‑87 (MQ=60)
GTAGGTAAGAACCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCC < SRR4302540.4757044/94‑1 (MQ=60)
GTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCC < SRR4302540.6775689/94‑1 (MQ=60)
AGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCAC < SRR4302540.4090315/94‑1 (MQ=60)
GGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACA < SRR4302540.5789093/94‑1 (MQ=60)
GGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACA < SRR4302540.5689618/94‑1 (MQ=60)
AGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACA < SRR4302540.5266688/94‑1 (MQ=60)
GTAAGAAACTGCGCGGCTATATGACAGATATGATACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAG < SRR4302540.9788015/94‑1 (MQ=60)
TAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGGCCTCACCCCG‑‑A‑‑Ccctctccccccgg > SRR4302540.3291572/1‑81 (MQ=60)
TAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGG < SRR4302540.5248961/94‑1 (MQ=60)
TAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGG < SRR4302540.9943548/94‑1 (MQ=60)
AAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGG < SRR4302540.5784150/94‑1 (MQ=60)
AGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGA < SRR4302540.8963432/94‑1 (MQ=60)
ACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGG < SRR4302540.6956529/94‑1 (MQ=60)
CTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGG < SRR4302540.2898029/94‑1 (MQ=60)
CTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGG < SRR4302540.9661060/94‑1 (MQ=60)
CTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGG < SRR4302540.9229973/94‑1 (MQ=60)
CGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAA < SRR4302540.8759464/94‑1 (MQ=60)
CGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAA < SRR4302540.8759465/94‑1 (MQ=60)
CGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAA < SRR4302540.8159186/94‑1 (MQ=60)
GCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAAC < SRR4302540.2404101/94‑1 (MQ=60)
GCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAAC < SRR4302540.2872911/94‑1 (MQ=60)
ATATGACAGATATGAAACGTATTGCTTTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACT < SRR4302540.5839789/94‑1 (MQ=60)
ATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑A < SRR4302540.3414575/94‑1 (MQ=60)
TGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AA < SRR4302540.5648881/94‑1 (MQ=60)
TGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AA < SRR4302540.8252751/94‑1 (MQ=60)
gaaagataggacacggatggctggTGCGGGTTAAGGGCGCGCGTATGCCCTCACCCCGTCC‑‑CTCCCCCACAGGGAGAGGGAGAAAACACTC‑AA‑G < SRR4302540.4291592/70‑1 (MQ=1)
TACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AA‑G < SRR4302540.8582148/94‑1 (MQ=60)
GACAGATATGAAACGTATTGCTTTTGCGGGTTAAGTGCGCGCTGATGCCCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AA‑G < SRR4302540.8710961/94‑1 (MQ=60)
GACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AA‑G < SRR4302540.6924463/94‑1 (MQ=60)
GACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AA‑G > SRR4302540.1630176/1‑94 (MQ=60)
GACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AA‑G < SRR4302540.746032/94‑1 (MQ=60)
AGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCCCAGGGAGAGGGAGAAAACTCTC‑AA‑Ggcc < SRR4302540.2934193/94‑4 (MQ=60)
AGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCC‑‑AACCTCTCCCACCAGGAGAGGGAGAAAAAACTC‑AAagac > SRR4302540.10083747/1‑90 (MQ=60)
GATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGCCC‑‑CTCTCCCACACGGAGAGGGGGGAAACACTC‑AAagccc > SRR4302540.3464455/1‑89 (MQ=60)
GATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCT < SRR4302540.4606184/94‑1 (MQ=60)
GATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCT < SRR4302540.28421/94‑1 (MQ=60)
TATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTC < SRR4302540.582151/94‑1 (MQ=60)
ATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCT < SRR4302540.289467/94‑1 (MQ=60)
ATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCT < SRR4302540.8059311/94‑1 (MQ=60)
ATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCCCTCCCACACGGAGAGGGAGAAAACAaacaaagacctct > SRR4302540.10159240/1‑81 (MQ=60)
TGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTC < SRR4302540.4802426/94‑1 (MQ=60)
GAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCC < SRR4302540.794156/94‑1 (MQ=60)
AAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCT < SRR4302540.7872068/94‑1 (MQ=60)
AACGTATTGCTGTTGCGGGTTAAGCGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTG < SRR4302540.5919812/94‑1 (MQ=54)
ACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGG < SRR4302540.1597467/94‑1 (MQ=60)
ACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGG < SRR4302540.2700468/94‑1 (MQ=60)
CTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGCCC‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAG < SRR4302540.160593/94‑1 (MQ=47)
ATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAA < SRR4302540.143073/94‑1 (MQ=60)
ATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAA < SRR4302540.3002915/94‑1 (MQ=60)
gtgccGTTGCGGGGTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCCCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAG < SRR4302540.8057451/89‑1 (MQ=37)
TTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAG < SRR4302540.233132/94‑1 (MQ=60)
TTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAG < SRR4302540.955257/94‑1 (MQ=60)
TTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAG < SRR4302540.3850544/94‑1 (MQ=60)
TGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGCAC‑‑CTCTCCCACAGGGGGAGGGAGAAAACACTCAAA‑GCCTTCTCCTGGAGAAGGGCT > SRR4302540.6985340/1‑94 (MQ=50)
GTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTT < SRR4302540.2283212/94‑1 (MQ=60)
GTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTT < SRR4302540.8685931/94‑1 (MQ=60)
GTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTT < SRR4302540.9725373/94‑1 (MQ=60)
TTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTG < SRR4302540.3908248/94‑1 (MQ=60)
TTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTG < SRR4302540.1892540/94‑1 (MQ=60)
TTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTG < SRR4302540.8514467/94‑1 (MQ=60)
TTCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGC < SRR4302540.4560326/94‑1 (MQ=57)
TGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGC < SRR4302540.6003354/94‑1 (MQ=60)
CGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTA < SRR4302540.4719385/94‑1 (MQ=60)
GTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTA < SRR4302540.9396472/94‑1 (MQ=60)
GTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTA < SRR4302540.2224762/94‑1 (MQ=60)
GTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTA < SRR4302540.5931695/94‑1 (MQ=60)
TAAGTGCGCGCTTATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACGC‑AAGGCCTTGTCCTGGAGAAGGCCTTGCTATTAGT < SRR4302540.3872288/94‑1 (MQ=35)
TAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGT < SRR4302540.6022734/94‑1 (MQ=60)
TAAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGT < SRR4302540.551578/94‑1 (MQ=60)
AAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTT < SRR4302540.8249376/94‑1 (MQ=60)
AAGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTT < SRR4302540.6047721/94‑1 (MQ=60)
AGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTG < SRR4302540.1318445/94‑1 (MQ=60)
AGTGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTG < SRR4302540.85655/94‑1 (MQ=60)
GTGCGCGCTGTTGCCGTCACCCCG‑‑ACCCTCCCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGC < SRR4302540.7399572/94‑1 (MQ=55)
TGCGCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCG < SRR4302540.5145862/94‑1 (MQ=60)
GCGCGCTGATGCCCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGG < SRR4302540.8247787/94‑1 (MQ=60)
GCGCGCTGATGCCCTCACCCCGCCC‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGG < SRR4302540.1972461/94‑1 (MQ=54)
GCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTA < SRR4302540.7145994/94‑1 (MQ=60)
GCGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTA < SRR4302540.1034698/94‑1 (MQ=60)
CGCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTAC < SRR4302540.5878497/94‑1 (MQ=60)
GCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACA < SRR4302540.9209166/94‑1 (MQ=60)
GCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACA < SRR4302540.6524628/94‑1 (MQ=60)
GCTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACA < SRR4302540.6524629/94‑1 (MQ=60)
CTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAG < SRR4302540.3404589/94‑1 (MQ=60)
CTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAG < SRR4302540.3865140/94‑1 (MQ=60)
CTGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAG < SRR4302540.1528961/94‑1 (MQ=60)
TGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGATAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGC < SRR4302540.4574431/94‑1 (MQ=60)
TGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGC < SRR4302540.9469577/94‑1 (MQ=60)
TGATGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGC < SRR4302540.9265550/94‑1 (MQ=60)
TGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACC < SRR4302540.4269564/94‑1 (MQ=60)
TGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACC < SRR4302540.4269565/94‑1 (MQ=60)
ggcctgcaccccgaccCTCTCCCATAGGTAGAGGGAGAAAACACTC‑AAGGCCGTCTCCTGGAGAAGGCCTGGCTATTAGTTGCGGTACAGCACC < SRR4302540.945091/78‑1 (MQ=60)
CCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTT < SRR4302540.708836/94‑1 (MQ=60)
CCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAACCACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTA < SRR4302540.2820598/94‑1 (MQ=60)
CCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTA < SRR4302540.8933682/94‑1 (MQ=60)
CCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTA < SRR4302540.4190080/94‑1 (MQ=60)
CTCACCCCG‑‑ACCCTCTTCCGCCGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCCATTAGTTGgcgacaaggaccttat > SRR4302540.2870724/1‑78 (MQ=47)
CTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAA > SRR4302540.2870725/1‑94 (MQ=60)
CTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAA > SRR4302540.5298374/1‑94 (MQ=60)
CTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAA < SRR4302540.2039036/94‑1 (MQ=60)
CTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAA > SRR4302540.9413650/1‑94 (MQ=60)
TCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGATAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAAT < SRR4302540.9824922/94‑1 (MQ=60)
TCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAAT < SRR4302540.9824923/94‑1 (MQ=60)
TCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAAT > SRR4302540.5414870/1‑94 (MQ=60)
CCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAAT < SRR4302540.261104/94‑1 (MQ=60)
ACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGA > SRR4302540.5962373/1‑94 (MQ=60)
ACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGA > SRR4302540.8735360/1‑94 (MQ=60)
CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAT < SRR4302540.2101004/94‑1 (MQ=60)
CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAT < SRR4302540.1400275/94‑1 (MQ=60)
CCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAT < SRR4302540.2021802/94‑1 (MQ=60)
cgcccgaccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGA < SRR4302540.3371614/85‑1 (MQ=60)
CCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATG > SRR4302540.3104861/1‑94 (MQ=60)
CCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATG > SRR4302540.1600082/1‑94 (MQ=60)
CCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATG < SRR4302540.6247384/94‑1 (MQ=60)
CCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGT < SRR4302540.8565070/94‑1 (MQ=60)
CCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGT < SRR4302540.2902354/94‑1 (MQ=60)
CCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGT < SRR4302540.1420898/94‑1 (MQ=60)
cgaccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTG > SRR4302540.8475224/6‑94 (MQ=60)
cgaccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTG < SRR4302540.9319759/89‑1 (MQ=60)
cgaccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTG < SRR4302540.7526661/89‑1 (MQ=60)
gaccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGA < SRR4302540.8086528/90‑1 (MQ=60)
cccCTCTCCCCCAGGGAGAGGGAGAAAACCCTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGAT < SRR4302540.3735247/91‑1 (MQ=60)
accCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGAT > SRR4302540.5810371/4‑94 (MQ=60)
C‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATAT > SRR4302540.2608652/1‑94 (MQ=60)
C‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATAT < SRR4302540.6281038/94‑1 (MQ=60)
C‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATAT > SRR4302540.9238679/1‑94 (MQ=60)
C‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATAT > SRR4302540.5890874/1‑94 (MQ=60)
C‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATAT < SRR4302540.9690718/94‑1 (MQ=60)
C‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATAT > SRR4302540.1591124/1‑94 (MQ=60)
ccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATA > SRR4302540.5540184/3‑94 (MQ=60)
ccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATA < SRR4302540.6419153/92‑1 (MQ=60)
ccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATA > SRR4302540.3014984/3‑94 (MQ=60)
ccCTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATA < SRR4302540.2961826/92‑1 (MQ=60)
ccCTCTCACACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATA < SRR4302540.425005/92‑1 (MQ=60)
CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTACTGATGTGATATC > SRR4302540.5589608/1‑94 (MQ=60)
CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATC > SRR4302540.7351254/1‑94 (MQ=60)
CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATC < SRR4302540.10037038/94‑1 (MQ=60)
CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATC > SRR4302540.477940/1‑94 (MQ=60)
CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATC > SRR4302540.10042074/1‑94 (MQ=60)
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TTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCG‑‑A‑‑CTCTCCCACAGGGAGAGGGAGAAAACACTC‑AA‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATC > NC_000913/3956999‑3957184
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
