Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,957,560	+C	intergenic (‑129/‑732)	ppiC ← / → rep	peptidyl‑prolyl cis‑trans isomerase C/rep helicase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,957,558	1	.	C	99.7%	1269.5 / ‑5.6	386	intergenic (‑127/‑734)	ppiC/rep	peptidyl‑prolyl cis‑trans isomerase C/rep helicase
Reads supporting (aligned to +/- strand): ref base . (1/0); major base C (188/196); minor base G (1/0); total (190/196)
Fisher's exact test for biased strand distribution p-value = 4.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 423 total aligned reads displayed.

TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CC‑T‑GC‑TCGCA‑GGT‑C‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG  >  NC_000913/3957470‑3957645

 aGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGT‑c‑cc                                                                                       <  1:3522547/93‑2 (MQ=255)

  gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGT‑c‑cct                                                                                      <  2:4651424/93‑3 (MQ=255)

  gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CC‑GGGCTTCGCA‑GGT‑c‑cct                                                                                      <  1:7895890/93‑3 (MQ=255)

  gCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGT‑c‑cct                                                                                      >  1:8714947/1‑91 (MQ=255)

   cATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGT‑c‑cctc                                                                                     <  1:4617034/93‑4 (MQ=255)

    aTGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGT‑c‑cctca                                                                                    >  2:3388512/1‑89 (MQ=255)

      gATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAg                                                                                  >  1:9662376/1‑93 (MQ=255)

       aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAgg                                                                                 <  2:10023356/93‑1 (MQ=255)

       aTCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAgg                                                                                 >  1:8183801/1‑93 (MQ=255)

        tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGTCC‑GGGAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAggg                                                                                >  1:2050685/1‑93 (MQ=255)

        tCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAggg                                                                                >  2:7401021/1‑93 (MQ=255)

         ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑TCCC‑G‑GCTTCGCC‑GGTCC‑C‑TCAAgggg                                                                               >  2:758161/1‑93 (MQ=255)

         ccGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAgggg                                                                               <  2:5127500/93‑1 (MQ=255)

          cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGga                                                                              <  1:686728/93‑1 (MQ=255)

          cGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGACC‑GGAAAATT‑CG‑G‑GCTTCGCA‑GGTCC‑C‑TCAAGGGga                                                                              >  2:3920551/1‑93 (MQ=255)

              gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGGAAAAGCCC‑CGAAAA‑T‑CCGG‑GCTTCGCAGGGC‑C‑C‑TCAAGGGGGGaaa                                                                          >  2:1940500/1‑93 (MQ=255)

              gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGaaa                                                                          >  2:4050144/1‑93 (MQ=255)

              gATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGaaa                                                                          >  1:7651234/1‑93 (MQ=255)

                tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCTCA‑GGTCC‑C‑TCAAGGGGAGAAAAc                                                                        >  2:7259791/1‑93 (MQ=255)

                tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAAc                                                                        <  2:2569141/93‑1 (MQ=255)

                tGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGCAAAc                                                                        >  1:3730247/1‑93 (MQ=255)

                 gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCCAGGGGAGAAAACt                                                                       >  1:7822958/1‑93 (MQ=255)

                 gCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACt                                                                       >  1:5967259/1‑93 (MQ=255)

                  cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGGAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACtt                                                                      >  1:3096040/1‑93 (MQ=255)

                  cTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACtt                                                                      <  1:693321/93‑1 (MQ=255)

                   tAACGTAATTGTCAGTCGGGGAGTGGCGGGTACATATATAGCAAAAGCCA‑GGAAAA‑C‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTa                                                                     <  1:1918711/93‑1 (MQ=255)

                   tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTa                                                                     <  1:6626596/93‑1 (MQ=255)

                   tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTa                                                                     <  1:6056807/93‑1 (MQ=255)

                   tAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTa                                                                     <  1:1108621/93‑1 (MQ=255)

                   tAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTa                                                                     >  1:10004361/1‑93 (MQ=255)

                   tAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTa                                                                     >  2:9078832/1‑93 (MQ=255)

                      cGTAATTGTCAGTCAGGGAGTGGCTGGGACCTTTATGGCAAAAGCCC‑GGGAAA‑T‑CCGG‑GCTTCGCC‑GGG‑CTC‑TCAAGGGGAGCAAACCTCggg                                                                  >  1:7285211/1‑93 (MQ=255)

                       gTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGc                                                                 >  1:5285254/1‑93 (MQ=255)

                         aaTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCct                                                               <  2:2927154/93‑1 (MQ=255)

                          aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCctc                                                              <  1:4040385/93‑1 (MQ=255)

                          aTTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCctc                                                              >  2:6701435/1‑93 (MQ=255)

                           ttGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCctct                                                             >  1:8818324/1‑93 (MQ=255)

                            tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTa                                                            <  1:9429408/93‑1 (MQ=255)

                            tGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTa                                                            <  1:5501688/93‑1 (MQ=255)

                             gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTAt                                                           >  2:5358060/1‑93 (MQ=255)

                             gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTAt                                                           >  2:7870572/1‑93 (MQ=255)

                             gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTAt                                                           <  2:1473900/93‑1 (MQ=255)

                             gtcagtcaGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTAt                                                           <  1:3964854/93‑1 (MQ=255)

                               cagtcagGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATgg                                                         <  2:6958507/93‑1 (MQ=255)

                                 gtcagGGAGTGGCTGGTACATATATGGCAAAAGCCCGGGAAAA‑C‑CG‑G‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGGAAACTTAGGGCCTCTATGGGc                                                       >  2:1262187/1‑93 (MQ=255)

                                  tcagGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt                                                      >  1:2795195/1‑93 (MQ=255)

                                  tcagGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCt                                                      >  1:7426141/1‑93 (MQ=255)

                                    agGGAGTGGCTGGTACATATATTGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCCAAGGGAGAAAACTTAGGGCCTCTATGGGCTAc                                                    >  2:9589144/1‑93 (MQ=255)

                                    agGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAc                                                    <  1:9195212/93‑1 (MQ=255)

                                     gggAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CC‑GGGCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACa                                                   >  1:7201277/1‑93 (MQ=255)

                                        aGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAg                                                >  2:6343641/1‑93 (MQ=255)

                                         gTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGt                                               >  2:9851498/1‑93 (MQ=255)

                                          tGGCTGGTACATATATGGCAAAAGCGC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAGGGGGAGAAACCTTAGGGCCTCTATGGGCTACAAAGTc                                              <  1:8475989/93‑1 (MQ=255)

                                          tGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CC‑GGGCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTc                                              >  1:8584216/1‑93 (MQ=255)

                                           ggCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa                                             <  1:6353632/93‑1 (MQ=255)

                                           ggCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa                                             <  1:5045612/93‑1 (MQ=255)

                                           ggCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CC‑GGGCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCa                                             >  2:4872432/1‑93 (MQ=255)

                                             cTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAtt                                           >  1:1408765/1‑93 (MQ=255)

                                               ggTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt                                         >  2:6039658/1‑93 (MQ=255)

                                               ggTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt                                         <  2:7739029/93‑1 (MQ=255)

                                               ggTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAt                                         >  1:2965123/1‑93 (MQ=255)

                                                gTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATc                                        <  1:7494616/93‑1 (MQ=255)

                                                 tACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg                                       >  1:9564880/1‑93 (MQ=255)

                                                 tACATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCg                                       >  2:1718760/1‑93 (MQ=255)

                                                  aCATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg                                      <  1:9814052/93‑1 (MQ=255)

                                                  aCATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCgg                                      <  1:2141926/93‑1 (MQ=255)

                                                   cATATATGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggg                                     >  1:4792785/1‑93 (MQ=255)

                                                     tatatGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCggggt                                   >  2:8522725/1‑92 (MQ=255)

                                                      atatGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAt                                  <  2:6280978/93‑1 (MQ=255)

                                                        atGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg                                >  2:810853/1‑93 (MQ=255)

                                                        atGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATgg                                >  2:1207331/1‑93 (MQ=255)

                                                         tGGCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGt                               <  2:8432336/93‑1 (MQ=255)

                                                           gCAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGtta                             <  2:4357849/93‑1 (MQ=255)

                                                            cAAAAGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttat                            >  2:5567846/1‑93 (MQ=255)

                                                             aaaaGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatt                           >  2:367124/1‑93 (MQ=255)

                                                              aaaGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt                          >  2:8001115/1‑93 (MQ=255)

                                                              aaaGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt                          >  2:5855670/1‑93 (MQ=255)

                                                              aaaGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGT‑C‑CATCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattt                          >  2:4995059/1‑93 (MQ=255)

                                                               aaGCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttatttt                         >  2:2952948/1‑93 (MQ=255)

                                                                 gCCC‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttat                       <  2:6148915/93‑1 (MQ=255)

                                                                  ccc‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGttattttatt                      <  2:4268401/93‑1 (MQ=255)

                                                                   cc‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg                     <  2:5775253/93‑1 (MQ=255)

                                                                   cc‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg                     <  1:3258836/93‑1 (MQ=255)

                                                                   cc‑GGAAAA‑T‑CCGG‑GCTTCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTg                     >  1:7140836/1‑93 (MQ=255)

                                                                                   ggcttCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAg         <  1:4814537/89‑1 (MQ=255)

                                                                                   ggcttCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAg         >  2:4389236/5‑93 (MQ=255)

                                                                                     cttCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCg       >  1:170937/3‑93 (MQ=255)

                                                                                      ttCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGa      <  1:4928346/92‑1 (MQ=255)

                                                                                      ttCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGa      <  1:2556450/92‑1 (MQ=255)

                                                                                       tCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGat     <  2:9319051/93‑1 (MQ=255)

                                                                                       tCGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGat     >  1:1012311/1‑93 (MQ=255)

                                                                                        cGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGTGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata    <  1:1618346/93‑1 (MQ=255)

                                                                                        cGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata    <  1:5567847/93‑1 (MQ=255)

                                                                                        cGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata    <  1:265884/93‑1 (MQ=255)

                                                                                        cGCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGata    <  2:9892381/93‑1 (MQ=255)

                                                                                         gCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat   >  2:6465832/1‑93 (MQ=255)

                                                                                         gCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat   >  2:2478643/1‑93 (MQ=255)

                                                                                         gCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat   <  2:8899620/93‑1 (MQ=255)

                                                                                         gCA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGatat   <  1:3348081/93‑1 (MQ=255)

                                                                                          cA‑GGTCC‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATg  <  1:4473386/93‑1 (MQ=255)

TAGCATGATCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCC‑GGAAAA‑T‑CC‑T‑GC‑TCGCA‑GGT‑C‑C‑TCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG  >  NC_000913/3957470‑3957645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 276 total aligned reads displayed.

TCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑TG‑‑‑C‑‑TCGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTGAT  >  NC_000913/3957478‑3957653

TCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGG                                                                                       <  SRR4302540.8113568/94‑1 (MQ=60)

TCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGG                                                                                       <  SRR4302540.5422410/94‑1 (MQ=60)

  CGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAG                                                                                     >  SRR4302540.3618603/1‑94 (MQ=60)

  CGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAG                                                                                     <  SRR4302540.126539/94‑1 (MQ=60)

   GCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATTTATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGA                                                                                    >  SRR4302540.1643138/1‑94 (MQ=60)

   GCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGA                                                                                    >  SRR4302540.9709854/1‑94 (MQ=60)

   GCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGA                                                                                    >  SRR4302540.9210030/1‑94 (MQ=60)

     AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAA                                                                                  >  SRR4302540.9881405/1‑94 (MQ=60)

     AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAA                                                                                  <  SRR4302540.6456876/94‑1 (MQ=60)

     AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAA                                                                                  >  SRR4302540.3277776/1‑94 (MQ=60)

     AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAA                                                                                  >  SRR4302540.3277777/1‑94 (MQ=60)

     AGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAA                                                                                  >  SRR4302540.7288214/1‑94 (MQ=60)

       ATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAAC                                                                                >  SRR4302540.8519467/1‑94 (MQ=60)

        TGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACT                                                                               >  SRR4302540.6033289/1‑94 (MQ=60)

         GCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGGAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTT                                                                              >  SRR4302540.3129975/1‑94 (MQ=60)

         GCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTT                                                                              <  SRR4302540.1603531/94‑1 (MQ=60)

          CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTA                                                                             <  SRR4302540.700752/94‑1 (MQ=60)

          CTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTA                                                                             <  SRR4302540.2491641/94‑1 (MQ=60)

           TAACGTAATTGTCAGTCGGGGAGTGGCGGGTACATATATAGCAAAAGCCAGGAAAACCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAG                                                                            <  SRR4302540.1939645/94‑1 (MQ=36)

           TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAG                                                                            >  SRR4302540.5597135/1‑94 (MQ=60)

           TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAG                                                                            <  SRR4302540.6699956/94‑1 (MQ=60)

           TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAG                                                                            <  SRR4302540.3030359/94‑1 (MQ=60)

           TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAG                                                                            <  SRR4302540.7535101/94‑1 (MQ=60)

           TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAG                                                                            <  SRR4302540.1120078/94‑1 (MQ=60)

           TAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAG                                                                            >  SRR4302540.9738257/1‑94 (MQ=60)

              CGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGC                                                                         <  SRR4302540.758379/94‑1 (MQ=60)

              CGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGC                                                                         >  SRR4302540.5343006/1‑94 (MQ=60)

              CGTAATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGC                                                                         >  SRR4302540.7465013/1‑94 (MQ=60)

               NNNATTGNCNGTCAGGGNGTNNNNGNTACATATATGGCAAAAGCCCGNAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCC                                                                        <  SRR4302540.2308341/94‑1 (MQ=44)

               GTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCC                                                                        >  SRR4302540.4078838/1‑94 (MQ=60)

               GTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCC                                                                        <  SRR4302540.7061894/94‑1 (MQ=60)

               GTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCCCAGGTCCCTCAAGGGGAGAAAACTTAGGGCC                                                                        >  SRR4302540.4927266/1‑94 (MQ=60)

                TAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCT                                                                       <  SRR4302540.106080/94‑1 (MQ=60)

                 AATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTC                                                                      <  SRR4302540.1436665/94‑1 (MQ=60)

                  ATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCT                                                                     >  SRR4302540.2885706/1‑94 (MQ=60)

                  ATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCT                                                                     >  SRR4302540.2904682/1‑94 (MQ=60)

                  ATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCT                                                                     >  SRR4302540.6302476/1‑94 (MQ=60)

                  ATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCT                                                                     <  SRR4302540.5904262/94‑1 (MQ=60)

                  ATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCT                                                                     >  SRR4302540.1708802/1‑94 (MQ=60)

                  ATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCT                                                                     >  SRR4302540.1265513/1‑94 (MQ=60)

                  ATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCT                                                                     >  SRR4302540.5081287/1‑94 (MQ=60)

                  ATTGTCAGTCAGGGAGTGGCTGGGACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCT                                                                     >  SRR4302540.8920283/1‑94 (MQ=60)

                    TGACAGTAAGGGAGTGGCTGGTACATAGATGGCAGAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTAT                                                                   <  SRR4302540.7553761/94‑1 (MQ=50)

                     GTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATG                                                                  <  SRR4302540.4007604/94‑1 (MQ=60)

                     GTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATG                                                                  >  SRR4302540.980958/1‑94 (MQ=60)

                     GTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATG                                                                  <  SRR4302540.4581796/94‑1 (MQ=60)

                      TCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGG                                                                 <  SRR4302540.9473316/94‑1 (MQ=60)

                      TCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GG‑‑‑CCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGG                                                                 <  SRR4302540.7120163/94‑1 (MQ=60)

                       CAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGG                                                                <  SRR4302540.4347500/94‑1 (MQ=60)

                       CAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGG                                                                <  SRR4302540.10084677/94‑1 (MQ=60)

                       CAGCCAGGGAGTGGCTGGTACATATATGGAAAAAG‑CCGGAACAACC‑‑CGGGCT‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGG                                                                <  SRR4302540.107571/94‑1 (MQ=30)

                        AGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGC                                                               <  SRR4302540.7965761/94‑1 (MQ=60)

                        AGCCAGGGAGTGGCTGGTACATATAAGACAAAAGCCCGGAAACGCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGC                                                               <  SRR4302540.8990082/94‑1 (MQ=40)

                         GTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCT                                                              >  SRR4302540.2825375/1‑94 (MQ=60)

                         GTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCT                                                              >  SRR4302540.7508868/1‑94 (MQ=60)

                         GTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCT                                                              <  SRR4302540.5042452/94‑1 (MQ=60)

                          TCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGT‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTA                                                             <  SRR4302540.2108215/94‑1 (MQ=60)

                           CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGGAAATCCCGGG‑‑‑T‑‑TCGCAGGTCCCTCAAAGGGGGAAAACTTAAGGCCTCTATTGGCTAC                                                            >  SRR4302540.9549079/1‑94 (MQ=36)

                           CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                                            >  SRR4302540.6963089/1‑94 (MQ=60)

                           CAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTAC                                                            >  SRR4302540.214741/1‑94 (MQ=60)

                             GGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAA                                                          <  SRR4302540.5597786/94‑1 (MQ=60)

                             GGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAA                                                          >  SRR4302540.4862976/1‑94 (MQ=60)

                              GGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAA                                                         >  SRR4302540.3374066/1‑94 (MQ=60)

                              GGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAA                                                         <  SRR4302540.8626428/94‑1 (MQ=60)

                              GGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCCCAAGGGGAGAAAACCTCGGGCCTCTATGGGCAACAAA                                                         >  SRR4302540.8843622/1‑94 (MQ=46)

                               GAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAG                                                        >  SRR4302540.10060725/1‑94 (MQ=60)

                                AGTGGCTGGTACATATATGGCAAACGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGT                                                       <  SRR4302540.3821900/94‑1 (MQ=60)

                                 GTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTC                                                      >  SRR4302540.7043201/1‑94 (MQ=60)

                                 GTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTC                                                      >  SRR4302540.8684012/1‑94 (MQ=60)

                                 GTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGAGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTC                                                      <  SRR4302540.6820117/94‑1 (MQ=60)

                                  TGGCTGGTACATATATGGCAAAAGCGCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAGGGGGAGAAACCTTAGGGCCTCTATGGGCTACAAAGTCA                                                     <  SRR4302540.8574434/94‑1 (MQ=57)

                                  TGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCA                                                     <  SRR4302540.5146203/94‑1 (MQ=60)

                                  TGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCA                                                     <  SRR4302540.8574435/94‑1 (MQ=60)

                                  GGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCA                                                     <  SRR4302540.733576/94‑1 (MQ=60)

                                   GGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAT                                                    <  SRR4302540.6424390/94‑1 (MQ=60)

                                   GGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAT                                                    <  SRR4302540.881861/94‑1 (MQ=60)

                                   GGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAT                                                    <  SRR4302540.4740051/94‑1 (MQ=60)

                                   GGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCAT                                                    <  SRR4302540.5100182/94‑1 (MQ=60)

                                    GCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATT                                                   <  SRR4302540.4720265/94‑1 (MQ=60)

                                     CTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTA                                                  >  SRR4302540.74888/1‑94 (MQ=60)

                                      TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                                 >  SRR4302540.2605746/1‑94 (MQ=60)

                                      TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                                 <  SRR4302540.2336166/94‑1 (MQ=60)

                                      TGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTAT                                                 >  SRR4302540.10105254/1‑94 (MQ=60)

                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAGCTTAGGTCCTCTATGGGCTACAAAGTCATTATC                                                <  SRR4302540.7883916/94‑1 (MQ=60)

                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                                >  SRR4302540.4848176/1‑94 (MQ=60)

                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                                <  SRR4302540.6403582/94‑1 (MQ=60)

                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                                <  SRR4302540.7247102/94‑1 (MQ=60)

                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                                <  SRR4302540.4408685/94‑1 (MQ=60)

                                       GGTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATC                                                <  SRR4302540.6724543/94‑1 (MQ=60)

                                        GTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCG                                               <  SRR4302540.7578325/94‑1 (MQ=60)

                                        GTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCG                                               >  SRR4302540.9677933/1‑94 (MQ=60)

                                        GTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCG                                               >  SRR4302540.5451267/1‑94 (MQ=60)

                                        GTACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCG                                               >  SRR4302540.8780856/1‑94 (MQ=60)

                                         TACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                                              <  SRR4302540.3040445/94‑1 (MQ=60)

                                         TACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGG                                              >  SRR4302540.8469320/1‑94 (MQ=60)

                                          ACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG                                             <  SRR4302540.9928901/94‑1 (MQ=60)

                                          ACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG                                             <  SRR4302540.2164944/94‑1 (MQ=60)

                                          ACATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGG                                             <  SRR4302540.1826987/94‑1 (MQ=60)

                                           CATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGG                                            >  SRR4302540.4632657/1‑94 (MQ=60)

                                            ATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA                                           >  SRR4302540.10145453/1‑94 (MQ=60)

                                            ATATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGA                                           >  SRR4302540.7008052/1‑94 (MQ=60)

                                             TATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACACAGTCATTATCGGGGAT                                          >  SRR4302540.4694909/1‑94 (MQ=60)

                                             TATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAT                                          <  SRR4302540.3617472/94‑1 (MQ=60)

                                             TATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGAT                                          >  SRR4302540.9495522/1‑94 (MQ=60)

                                              ATATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATG                                         >  SRR4302540.7733654/1‑94 (MQ=60)

                                               TATGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGG                                        <  SRR4302540.2749689/94‑1 (MQ=60)

                                                 TGGCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTT                                      >  SRR4302540.2892962/1‑94 (MQ=60)

                                                   GCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT                                    >  SRR4302540.10133474/1‑94 (MQ=60)

                                                   GCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT                                    <  SRR4302540.2651910/94‑1 (MQ=60)

                                                   GCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT                                    <  SRR4302540.6202365/94‑1 (MQ=60)

                                                   GCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT                                    <  SRR4302540.8858096/94‑1 (MQ=60)

                                                   GCAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTAT                                    >  SRR4302540.4966708/1‑94 (MQ=60)

                                                    CAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                                   <  SRR4302540.5373820/94‑1 (MQ=60)

                                                    CAAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATT                                   <  SRR4302540.7748662/94‑1 (MQ=60)

                                                     AAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTGCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTT                                  >  SRR4302540.4065842/1‑94 (MQ=60)

                                                     AAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTT                                  <  SRR4302540.2814775/94‑1 (MQ=60)

                                                     AAAAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTT                                  <  SRR4302540.675785/94‑1 (MQ=60)

                                                     AAAAGCCCGAAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTT                                  <  SRR4302540.7268279/94‑1 (MQ=60)

                                                      tggcaaagtcccggaaaatccgggcttcgcaggccCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTT                                      <  SRR4302540.8134906/59‑1 (MQ=60)

                                                       AAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTA                                <  SRR4302540.1837386/94‑1 (MQ=60)

                                                       AAGCCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTA                                <  SRR4302540.2072607/94‑1 (MQ=60)

                                                          CCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG                             >  SRR4302540.7220388/1‑94 (MQ=60)

                                                          CCCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTG                             >  SRR4302540.9268169/1‑94 (MQ=60)

                                                           CTGGAAAATCC‑‑GG‑‑‑CCTTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT                            <  SRR4302540.3996726/94‑1 (MQ=60)

                                                           CCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT                            >  SRR4302540.6474333/1‑94 (MQ=60)

                                                           CCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT                            <  SRR4302540.3294373/94‑1 (MQ=60)

                                                           CCGGAAAATCC‑‑GGGC‑T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGT                            <  SRR4302540.3817048/94‑1 (MQ=60)

                                                              gcccgaaaaatccgggcaTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATT                              <  SRR4302540.9082341/76‑1 (MQ=60)

                                                                 cggaaaatccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTC                           <  SRR4302540.9683329/79‑1 (MQ=60)

                                                                    aaaatccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT                        <  SRR4302540.2707956/82‑1 (MQ=60)

                                                                    aaaatccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT                        >  SRR4302540.5747700/13‑94 (MQ=60)

                                                                    aaaatccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT                        <  SRR4302540.2188065/82‑1 (MQ=60)

                                                                    aaaatccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT                        <  SRR4302540.745269/82‑1 (MQ=60)

                                                                    aaaatccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT                        <  SRR4302540.2176110/82‑1 (MQ=60)

                                                                    aaaatccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAAT                        <  SRR4302540.3184214/82‑1 (MQ=60)

                                                                     aaatccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATT                       >  SRR4302540.8059545/12‑94 (MQ=60)

                                                                     aaatccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATT                       >  SRR4302540.1455619/12‑94 (MQ=60)

                                                                     aaatccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATT                       <  SRR4302540.3006725/83‑1 (MQ=60)

                                                                     aaatccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATT                       >  SRR4302540.4159719/12‑94 (MQ=60)

                                                                     aaatccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATT                       <  SRR4302540.3722753/83‑1 (MQ=60)

                                                                      aatccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTT                      >  SRR4302540.7622470/11‑94 (MQ=60)

                                                                      aatccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTT                      >  SRR4302540.1330023/11‑94 (MQ=60)

                                                                       atccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA                     >  SRR4302540.3173550/10‑94 (MQ=60)

                                                                       atccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA                     <  SRR4302540.5109073/85‑1 (MQ=60)

                                                                       atccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTA                     >  SRR4302540.3408667/10‑94 (MQ=60)

                                                                         ccgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATG                   >  SRR4302540.2012884/8‑94 (MQ=60)

                                                                          cgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGA                  <  SRR4302540.4358480/88‑1 (MQ=60)

                                                                          cgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGA                  >  SRR4302540.4200189/7‑94 (MQ=60)

                                                                          cgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGA                  >  SRR4302540.5698342/7‑94 (MQ=60)

                                                                          cgggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGA                  >  SRR4302540.4689569/7‑94 (MQ=60)

                                                                           gggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAG                 <  SRR4302540.6594712/89‑1 (MQ=60)

                                                                           gggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAG                 <  SRR4302540.6949136/89‑1 (MQ=60)

                                                                           gggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAG                 >  SRR4302540.7700003/6‑94 (MQ=60)

                                                                            ggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGC                >  SRR4302540.1692213/5‑94 (MQ=60)

                                                                            ggctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGC                <  SRR4302540.4866067/90‑1 (MQ=60)

                                                                             gctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCG               >  SRR4302540.3319586/4‑94 (MQ=60)

                                                                             gctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCG               <  SRR4302540.10154525/91‑1 (MQ=60)

                                                                             T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGAT             >  SRR4302540.6644202/1‑94 (MQ=60)

                                                                             T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGAT             >  SRR4302540.1022573/1‑94 (MQ=60)

                                                                             T‑‑TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGAT             >  SRR4302540.1888768/1‑94 (MQ=60)

                                                                              ctTCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGA              >  SRR4302540.3390220/3‑94 (MQ=60)

                                                                                TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATA            <  SRR4302540.9358742/94‑1 (MQ=60)

                                                                                TCGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATA            >  SRR4302540.8737794/1‑94 (MQ=60)

                                                                                 CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGTGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATAT           <  SRR4302540.1636093/94‑1 (MQ=60)

                                                                                 CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATAT           <  SRR4302540.7874371/94‑1 (MQ=60)

                                                                                 CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATAT           <  SRR4302540.268497/94‑1 (MQ=60)

                                                                                 CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATAT           <  SRR4302540.9574551/94‑1 (MQ=60)

                                                                                 CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATAT           <  SRR4302540.3149334/94‑1 (MQ=60)

                                                                                 CGCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATAT           <  SRR4302540.5629155/94‑1 (MQ=60)

                                                                                  GCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG          <  SRR4302540.8287326/94‑1 (MQ=60)

                                                                                  GCAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATG          >  SRR4302540.204268/1‑94 (MQ=60)

                                                                                   CAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGG         <  SRR4302540.4521905/94‑1 (MQ=60)

                                                                                   CAGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGG         <  SRR4302540.6041022/94‑1 (MQ=60)

                                                                                    AGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGC        >  SRR4302540.6733736/1‑94 (MQ=60)

                                                                                    AGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGC        >  SRR4302540.7268676/1‑94 (MQ=60)

                                                                                    AGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGC        >  SRR4302540.2515545/1‑94 (MQ=60)

                                                                                    AGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGC        >  SRR4302540.7206273/1‑94 (MQ=60)

                                                                                    AGGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGC        >  SRR4302540.3392310/1‑94 (MQ=60)

                                                                                     GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACACAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCC       >  SRR4302540.836127/1‑94 (MQ=60)

                                                                                     GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCA       >  SRR4302540.5194046/1‑94 (MQ=60)

                                                                                     GGTCCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCA       >  SRR4302540.1184119/1‑94 (MQ=60)

                                                                                      gtcCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCAT      <  SRR4302540.2325265/91‑1 (MQ=60)

                                                                                      GC‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATT     <  SRR4302540.2409905/94‑1 (MQ=60)

                                                                                       tcCCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATT     >  SRR4302540.4316564/3‑94 (MQ=60)

                                                                                       C‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTG    >  SRR4302540.4844289/1‑94 (MQ=60)

                                                                                       C‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTG    <  SRR4302540.3076200/94‑1 (MQ=60)

                                                                                       C‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTG    >  SRR4302540.4844290/1‑94 (MQ=60)

                                                                                       C‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTG    <  SRR4302540.5009789/94‑1 (MQ=60)

                                                                                       C‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTG    <  SRR4302540.9618874/94‑1 (MQ=60)

                                                                                       C‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTA    >  SRR4302540.7008354/1‑94 (MQ=60)

                                                                                         CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTGA   >  SRR4302540.8771049/1‑94 (MQ=60)

                                                                                         CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTGA   >  SRR4302540.1388840/1‑94 (MQ=60)

                                                                                         CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTGA   >  SRR4302540.5868098/1‑94 (MQ=60)

                                                                                          CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTGAT  >  SRR4302540.3974249/1‑94 (MQ=60)

                                                                                          CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTGAT  <  SRR4302540.4755541/94‑1 (MQ=60)

                                                                                          CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTGAT  >  SRR4302540.1033427/1‑94 (MQ=60)

                                                                                          CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTGAT  >  SRR4302540.5728914/1‑94 (MQ=60)

                                                                                          CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTGAT  <  SRR4302540.1553201/94‑1 (MQ=60)

                                                                                          CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTGAT  <  SRR4302540.5629372/94‑1 (MQ=60)

                                                                                          CTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTACTTTATTGTCAATTTATGAGCGATATGGCATTGAT  >  SRR4302540.1841677/1‑94 (MQ=60)

TCCGCAGATGCTAACGTAATTGTCAGTCAGGGAGTGGCTGGTACATATATGGCAAAAGCCCGGAAAATCC‑‑TG‑‑‑C‑‑TCGCAGGT‑CCTCAAGGGGAGAAAACTTAGGGCCTCTATGGGCTACAAAGTCATTATCGGGGATGGTTATTTTATTGTCAATTTATGAGCGATATGGCATTGAT  >  NC_000913/3957478‑3957653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`