Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,474,882 C→T T331T (ACG→ACA argI ← ornithine carbamoyltransferase 1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,474,8820CT99.8% 1826.3 / ‑6.4 501T331T (ACG→ACAargIornithine carbamoyltransferase 1
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base T (229/271);  total (230/271)
Fisher's exact test for biased strand distribution p-value = 4.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01

Only 100 of 512 total aligned reads displayed.

TGGGTGGAAGAATAGACCTATCACTGCATAAATAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGT  >  NC_000913/4474795‑4474971
                                                                                       |                                                                                         
atagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTcgc                                                                                      >  1:10016482‑M2/75‑93 (MQ=255)
 tagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTcgcg                                                                                     >  1:7430918‑M2/74‑93 (MQ=255)
  agacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGa                                                                                    <  2:7113964‑M2/21‑1 (MQ=255)
    acctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGAcc                                                                                  >  1:4937730‑M2/71‑93 (MQ=255)
    acctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGAcc                                                                                  <  1:4292194‑M2/23‑1 (MQ=255)
     cctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCa                                                                                 >  2:457917‑M2/70‑93 (MQ=255)
      ctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCAt                                                                                <  2:1787952‑M2/25‑1 (MQ=255)
      ctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCAt                                                                                <  2:9118257‑M2/25‑1 (MQ=255)
       tatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATc                                                                               >  1:1460614‑M2/68‑93 (MQ=255)
       tatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATc                                                                               <  2:5785833‑M2/26‑1 (MQ=255)
        atcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCa                                                                              <  1:6099790‑M2/27‑1 (MQ=255)
         tcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCAc                                                                             <  2:1326482‑M2/28‑1 (MQ=255)
         tcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCAc                                                                             <  1:7906277‑M2/28‑1 (MQ=255)
         tcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCAc                                                                             >  2:4705634‑M2/66‑93 (MQ=255)
          cactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCAcc                                                                            >  2:3473653‑M2/65‑93 (MQ=255)
           actgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCg                                                                           >  2:1180547‑M2/64‑93 (MQ=255)
            ctgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGc                                                                          >  2:9188724‑M2/63‑93 (MQ=255)
             tgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCt                                                                         >  1:3989134‑M2/62‑93 (MQ=255)
             tgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCt                                                                         >  2:9754818‑M2/62‑93 (MQ=255)
                   aaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATa                                                                   <  1:1315477‑M2/38‑1 (MQ=255)
                   aaataatgtgatcccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATa                                                                   <  2:2102444‑M2/38‑1 (MQ=255)
                    aataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAg                                                                  <  1:7080249‑M2/39‑1 (MQ=255)
                    aataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAg                                                                  >  2:5388691‑M2/55‑93 (MQ=255)
                    aataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAg                                                                  <  1:8030309‑M2/39‑1 (MQ=255)
                     ataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGt                                                                 <  2:8886656‑M2/40‑1 (MQ=255)
                     ataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGt                                                                 >  2:2360930‑M2/54‑93 (MQ=255)
                      taatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTa                                                                <  2:4180285‑M2/41‑1 (MQ=255)
                      taatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTa                                                                <  1:9345829‑M2/41‑1 (MQ=255)
                       aatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTAt                                                               <  1:8657057‑M2/42‑1 (MQ=255)
                        atgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATg                                                              >  2:1260233‑M2/51‑93 (MQ=255)
                         tgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGc                                                             >  2:5246260‑M2/50‑93 (MQ=255)
                          gtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCa                                                            >  2:10014987‑M2/49‑93 (MQ=255)
                          gtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCa                                                            <  2:790006‑M2/45‑1 (MQ=255)
                           tgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCAt                                                           <  1:6333992‑M2/46‑1 (MQ=255)
                            gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGATTGTCGCGACCATCACCGCTTTGATAGTATGCATa                                                          <  2:6376787‑M2/47‑1 (MQ=255)
                            gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATa                                                          <  1:6886228‑M2/47‑1 (MQ=255)
                            gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATa                                                          <  2:6610908‑M2/47‑1 (MQ=255)
                              tgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACg                                                        <  1:3697182‑M2/49‑1 (MQ=255)
                              tgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACg                                                        <  1:962992‑M2/49‑1 (MQ=255)
                              tgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACg                                                        <  1:8159830‑M2/49‑1 (MQ=255)
                              agccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACg                                                        <  2:2454470‑M2/49‑1 (MQ=255)
                               gccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACgg                                                       <  1:9903524‑M2/50‑1 (MQ=255)
                                  gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGttt                                                    >  1:1946214‑M2/41‑93 (MQ=255)
                                  gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGttt                                                    >  1:438332‑M2/41‑93 (MQ=255)
                                  aggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGttt                                                    >  1:7521130‑M2/41‑93 (MQ=255)
                                   ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtttt                                                   >  1:8230038‑M2/40‑93 (MQ=255)
                                    gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTc                                                  <  1:6532437‑M2/55‑1 (MQ=255)
                                    gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTc                                                  >  1:2021718‑M2/39‑93 (MQ=255)
                                     atggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTcc                                                 <  1:5468864‑M2/56‑1 (MQ=255)
                                       tgtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGc                                               <  2:1603449‑M2/58‑1 (MQ=255)
                                         tttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCt                                             <  1:9730591‑M2/60‑1 (MQ=255)
                                         tttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCt                                             <  2:5670585‑M2/60‑1 (MQ=255)
                                           tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGa                                           <  1:8839443‑M2/62‑1 (MQ=255)
                                           tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGa                                           >  2:3675868‑M2/32‑93 (MQ=255)
                                           tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGa                                           <  2:2825705‑M2/62‑1 (MQ=255)
                                            gtattgtccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGAt                                          <  1:3088139‑M2/63‑1 (MQ=255)
                                             tatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATc                                         >  2:3303341‑M2/30‑93 (MQ=255)
                                                ttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCaaa                                      <  2:3888137‑M2/67‑1 (MQ=255)
                                                 tcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCaaaa                                     <  1:3188279‑M2/68‑1 (MQ=255)
                                                 tcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCaaaa                                     >  1:5615882‑M2/26‑93 (MQ=255)
                                                 tcccggcatctttatagcgatagcaATTATTTACTGAGTGGCGCGACCATCACCGCTTTGATAGTATGCATACGGTGTTCCGCCTGATCaaaa                                     <  2:6049239‑M2/68‑1 (MQ=255)
                                                  cccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCaaaaa                                    <  2:9815136‑M2/69‑1 (MQ=255)
                                                     ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACaa                                 <  1:7309180‑M2/72‑1 (MQ=255)
                                                     ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACaa                                 <  2:3033457‑M2/72‑1 (MQ=255)
                                                     ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACaa                                 <  2:9374575‑M2/72‑1 (MQ=255)
                                                      gcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAt                                >  2:8333250‑M2/21‑93 (MQ=255)
                                                      gcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAt                                >  2:143041‑M2/21‑93 (MQ=255)
                                                        atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGc                              >  1:5087236‑M2/19‑93 (MQ=255)
                                                        atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGc                              >  1:5950542‑M2/19‑93 (MQ=255)
                                                        atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGc                              <  2:3159952‑M2/75‑1 (MQ=255)
                                                         tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt                             >  1:2193890‑M2/18‑93 (MQ=255)
                                                         tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt                             <  2:5924289‑M2/76‑1 (MQ=255)
                                                          ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTg                            <  1:2286061‑M2/77‑1 (MQ=255)
                                                          ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTg                            <  1:9002126‑M2/77‑1 (MQ=255)
                                                          ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTg                            >  1:359483‑M2/17‑93 (MQ=255)
                                                          ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTg                            <  1:5259939‑M2/77‑1 (MQ=255)
                                                           tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTgg                           <  2:5148124‑M2/78‑1 (MQ=255)
                                                           tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTgg                           <  2:8518032‑M2/78‑1 (MQ=255)
                                                             tatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTggcg                         >  1:5730633‑M2/14‑93 (MQ=255)
                                                              atagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCtggcgt                        <  2:6164210‑M2/81‑2 (MQ=255)
                                                               tagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTggcggc                       >  2:2615456‑M2/12‑93 (MQ=255)
                                                               tagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTggcggc                       >  2:5073725‑M2/12‑93 (MQ=255)
                                                                agcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCa                      <  2:2866702‑M2/83‑1 (MQ=255)
                                                                 gcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAg                     >  1:18640‑M2/10‑93 (MQ=255)
                                                                  cgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGa                    >  2:4366931‑M2/9‑93 (MQ=255)
                                                                   gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAt                   <  1:2555791‑M2/86‑1 (MQ=255)
                                                                    atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAtt                  >  1:287105‑M2/7‑93 (MQ=255)
                                                                        caATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGaa              <  1:6446820‑M2/91‑1 (MQ=255)
                                                                        caATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGaa              <  2:6943712‑M2/91‑1 (MQ=255)
                                                                          attattTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGa            <  1:4722416/93‑1 (MQ=255)
                                                                          attattTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGa            <  1:4770160/93‑1 (MQ=255)
                                                                           ttattTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGAc           >  1:423102/1‑93 (MQ=255)
                                                                           ttattTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGAc           >  2:8138814/1‑93 (MQ=255)
                                                                               ttACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtca       <  2:7454471/93‑1 (MQ=255)
                                                                                tACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtcat      <  2:4024297/93‑1 (MQ=255)
                                                                                tACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtcat      >  1:949517/1‑93 (MQ=255)
                                                                                 aCTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtcatc     <  2:5523508/93‑1 (MQ=255)
                                                                                  cTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtcatca    <  1:8397163/93‑1 (MQ=255)
                                                                                   tGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAg   <  1:2963799/93‑1 (MQ=255)
                                                                                    gAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGt  >  1:3289984/1‑93 (MQ=255)
                                                                                       |                                                                                         
TGGGTGGAAGAATAGACCTATCACTGCATAAATAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGT  >  NC_000913/4474795‑4474971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 248 total aligned reads displayed.
GACCTATCACTGCATAAATAATGTGATGCCGGGATGGTTT‑‑‑‑‑‑‑‑CCGCATCTTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACT  >  NC_000913/4474809‑4474975
                                                                                     |                                                                                             
GACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACC                                                                                      >  SRR4302540.4991003/1‑94 (MQ=21)
GACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACC                                                                                      <  SRR4302540.5321681/94‑1 (MQ=21)
 ACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCA                                                                                     <  SRR4302540.4338892/94‑1 (MQ=19)
 ACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCA                                                                                     <  SRR4302540.3740554/94‑1 (MQ=19)
  CCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCAT                                                                                    >  SRR4302540.2168524/1‑94 (MQ=18)
  CCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCAT                                                                                    >  SRR4302540.9161752/1‑94 (MQ=18)
  CCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCAT                                                                                    >  SRR4302540.2953111/1‑94 (MQ=18)
  CCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCAT                                                                                    >  SRR4302540.506075/1‑94 (MQ=18)
   CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATC                                                                                   <  SRR4302540.592258/94‑1 (MQ=16)
   CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATC                                                                                   >  SRR4302540.1476522/1‑94 (MQ=16)
   CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATC                                                                                   >  SRR4302540.148963/1‑94 (MQ=16)
   CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATC                                                                                   <  SRR4302540.9714736/94‑1 (MQ=16)
   CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATC                                                                                   >  SRR4302540.798401/1‑94 (MQ=16)
   CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATC                                                                                   <  SRR4302540.8161739/94‑1 (MQ=16)
   CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATC                                                                                   >  SRR4302540.8324768/1‑94 (MQ=16)
   CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATC                                                                                   >  SRR4302540.8591999/1‑94 (MQ=16)
   CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATC                                                                                   >  SRR4302540.2028219/1‑94 (MQ=16)
   CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATC                                                                                   >  SRR4302540.8493199/1‑94 (MQ=16)
   CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGCGTCGCGACCATC                                                                                   >  SRR4302540.2048714/1‑94 (MQ=23)
         CTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCT                                                                             >  SRR4302540.4032074/1‑94 (MQ=16)
         CTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCT                                                                             >  SRR4302540.1926329/1‑94 (MQ=16)
          TGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTT                                                                            <  SRR4302540.5324403/94‑1 (MQ=18)
          TGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTT                                                                            >  SRR4302540.4263756/1‑94 (MQ=18)
           GCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTT                                                                           <  SRR4302540.8457007/94‑1 (MQ=19)
           GCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTT                                                                           <  SRR4302540.5305191/94‑1 (MQ=19)
            CATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTG                                                                          <  SRR4302540.4478167/94‑1 (MQ=21)
              taAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGAT                                                                        >  SRR4302540.7621205/3‑94 (MQ=25)
              taAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGAT                                                                        >  SRR4302540.4784050/3‑94 (MQ=25)
                AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG                                                                      <  SRR4302540.8148785/94‑1 (MQ=28)
                AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG                                                                      <  SRR4302540.5675654/94‑1 (MQ=28)
                AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG                                                                      <  SRR4302540.1329157/94‑1 (MQ=28)
                AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG                                                                      <  SRR4302540.5278586/94‑1 (MQ=28)
                 AATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT                                                                     <  SRR4302540.3314596/94‑1 (MQ=28)
                 AATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT                                                                     <  SRR4302540.8123676/94‑1 (MQ=28)
                 AATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT                                                                     <  SRR4302540.7159051/94‑1 (MQ=28)
                 AATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT                                                                     >  SRR4302540.3055062/1‑94 (MQ=28)
                 AATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT                                                                     >  SRR4302540.7317161/1‑94 (MQ=28)
                  ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTA                                                                    <  SRR4302540.2228840/94‑1 (MQ=28)
                   TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTAT                                                                   <  SRR4302540.9457166/94‑1 (MQ=28)
                   TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTAT                                                                   <  SRR4302540.2223320/94‑1 (MQ=28)
                   TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTAT                                                                   <  SRR4302540.9798773/94‑1 (MQ=28)
                   TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTAT                                                                   <  SRR4302540.2521728/94‑1 (MQ=28)
                    AATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATG                                                                  <  SRR4302540.7427419/94‑1 (MQ=30)
                     ATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGC                                                                 >  SRR4302540.2642234/1‑94 (MQ=32)
                      atgtgatgccgggattgtttgtatttcccgtcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGC                                                                 <  SRR4302540.8936576/44‑1 (MQ=60)
                      TGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCA                                                                >  SRR4302540.809638/1‑94 (MQ=34)
                      TGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCA                                                                >  SRR4302540.9458874/1‑94 (MQ=34)
                       GTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCAT                                                               <  SRR4302540.9668553/94‑1 (MQ=36)
                       GTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCAT                                                               <  SRR4302540.8851011/94‑1 (MQ=36)
                       GTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCAT                                                               <  SRR4302540.3221372/94‑1 (MQ=36)
                       GTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCAT                                                               <  SRR4302540.5769552/94‑1 (MQ=36)
                       GTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCAT                                                               <  SRR4302540.7624093/94‑1 (MQ=36)
                         tgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATA                                                              <  SRR4302540.6404524/47‑1 (MQ=60)
                         tgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATA                                                              >  SRR4302540.957052/48‑94 (MQ=60)
                         tgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATA                                                              <  SRR4302540.106277/47‑1 (MQ=60)
                         tgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATA                                                              <  SRR4302540.4298385/47‑1 (MQ=60)
                          gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATAC                                                             <  SRR4302540.6962571/48‑1 (MQ=60)
                          gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATAC                                                             <  SRR4302540.4234300/48‑1 (MQ=60)
                          gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATAC                                                             >  SRR4302540.2906646/47‑94 (MQ=60)
                          gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATAC                                                             <  SRR4302540.482708/48‑1 (MQ=60)
                          gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATAC                                                             >  SRR4302540.9934597/47‑94 (MQ=60)
                           atgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACG                                                            >  SRR4302540.6846028/46‑94 (MQ=60)
                           atgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACG                                                            <  SRR4302540.9389249/49‑1 (MQ=60)
                            tgccgggattgtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGG                                                           <  SRR4302540.6198760/50‑1 (MQ=60)
                            tgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGG                                                           <  SRR4302540.3737543/50‑1 (MQ=60)
                            tgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGG                                                           <  SRR4302540.8254578/50‑1 (MQ=60)
                            tgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGG                                                           <  SRR4302540.972943/50‑1 (MQ=60)
                            tgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGG                                                           <  SRR4302540.5243319/50‑1 (MQ=60)
                             gccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGT                                                          <  SRR4302540.10019232/51‑1 (MQ=60)
                             gccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGT                                                          <  SRR4302540.3626360/51‑1 (MQ=60)
                              ccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTT                                                         >  SRR4302540.7488336/43‑94 (MQ=60)
                               cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT                                                        <  SRR4302540.4141624/53‑1 (MQ=60)
                               cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT                                                        >  SRR4302540.365489/42‑94 (MQ=60)
                               cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT                                                        <  SRR4302540.6412348/53‑1 (MQ=60)
                               cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT                                                        >  SRR4302540.1967401/42‑94 (MQ=60)
                               cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT                                                        >  SRR4302540.442989/42‑94 (MQ=60)
                               caggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT                                                        >  SRR4302540.7605253/42‑94 (MQ=60)
                                gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTT                                                       <  SRR4302540.4038673/54‑1 (MQ=60)
                                gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTT                                                       >  SRR4302540.8325704/41‑94 (MQ=60)
                                 ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTC                                                      >  SRR4302540.8964010/40‑94 (MQ=60)
                                 ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTC                                                      <  SRR4302540.2015650/55‑1 (MQ=60)
                                  gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCC                                                     >  SRR4302540.1101097/39‑94 (MQ=60)
                                  gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCC                                                     <  SRR4302540.6604960/56‑1 (MQ=60)
                                   atggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCG                                                    >  SRR4302540.4976013/38‑94 (MQ=60)
                                     ggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCC                                                  >  SRR4302540.10095499/36‑94 (MQ=60)
                                     ggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCC                                                  >  SRR4302540.7524644/36‑94 (MQ=60)
                                      gtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCT                                                 <  SRR4302540.10011927/60‑1 (MQ=60)
                                      gtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCT                                                 >  SRR4302540.6523260/35‑94 (MQ=60)
                                      gtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCT                                                 <  SRR4302540.2040971/60‑1 (MQ=60)
                                       tttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTG                                                <  SRR4302540.8104739/61‑1 (MQ=60)
                                       tttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTG                                                >  SRR4302540.10112971/34‑94 (MQ=60)
                                       tttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTG                                                >  SRR4302540.1657887/34‑94 (MQ=60)
                                        ttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGA                                               >  SRR4302540.509251/33‑94 (MQ=60)
                                         tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGAT                                              <  SRR4302540.8569737/63‑1 (MQ=60)
                                         tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGAT                                              <  SRR4302540.8941685/63‑1 (MQ=60)
                                          gtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATC                                             <  SRR4302540.4562825/64‑1 (MQ=60)
                                          gtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATC                                             >  SRR4302540.3944073/31‑94 (MQ=60)
                                          gtatttcccggcatctttagagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATC                                             <  SRR4302540.4562826/64‑1 (MQ=60)
                                          gtattgtccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATC                                             <  SRR4302540.3122025/64‑1 (MQ=60)
                                           tatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCA                                            <  SRR4302540.5249633/65‑1 (MQ=60)
                                            atttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAA                                           >  SRR4302540.3481015/29‑94 (MQ=60)
                                            atttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAA                                           <  SRR4302540.1396712/66‑1 (MQ=60)
                                            atttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAA                                           <  SRR4302540.755559/66‑1 (MQ=60)
                                            atttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAA                                           >  SRR4302540.6301375/29‑94 (MQ=60)
                                             tttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAA                                          <  SRR4302540.5594928/67‑1 (MQ=60)
                                              ttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAA                                         >  SRR4302540.4787245/27‑94 (MQ=60)
                                              ttcccggcatctttatagcgataccaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAA                                         <  SRR4302540.3088078/68‑1 (MQ=60)
                                               tcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAA                                        <  SRR4302540.3222914/69‑1 (MQ=60)
                                                cccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAAC                                       <  SRR4302540.550754/70‑1 (MQ=60)
                                                 ccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCAGCCTGATCAAAAACA                                      >  SRR4302540.7230016/24‑94 (MQ=60)
                                                   ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAT                                    <  SRR4302540.4310439/73‑1 (MQ=60)
                                                   ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAT                                    <  SRR4302540.9674066/73‑1 (MQ=60)
                                                   ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAT                                    >  SRR4302540.5100527/22‑94 (MQ=60)
                                                   ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAT                                    <  SRR4302540.6570186/73‑1 (MQ=60)
                                                   ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAT                                    <  SRR4302540.7393672/73‑1 (MQ=60)
                                                   ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAT                                    <  SRR4302540.10063299/73‑1 (MQ=60)
                                                   ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAT                                    <  SRR4302540.7390779/73‑1 (MQ=60)
                                                   ggcatctttatagcgatagaaATTATTTACTGAGTGGCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAATCAAT                                    <  SRR4302540.1782445/73‑1 (MQ=60)
                                                     catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAACCAATGC                                  >  SRR4302540.9769769/20‑94 (MQ=60)
                                                     catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGC                                  >  SRR4302540.6016353/20‑94 (MQ=60)
                                                     catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGC                                  >  SRR4302540.5142240/20‑94 (MQ=60)
                                                     catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGC                                  >  SRR4302540.756628/20‑94 (MQ=60)
                                                      atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT                                 >  SRR4302540.2217582/19‑94 (MQ=60)
                                                      atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT                                 <  SRR4302540.9924783/76‑1 (MQ=60)
                                                      atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT                                 >  SRR4302540.4315069/19‑94 (MQ=60)
                                                      atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT                                 >  SRR4302540.6166876/19‑94 (MQ=60)
                                                      atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT                                 <  SRR4302540.2482139/76‑1 (MQ=60)
                                                      atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT                                 >  SRR4302540.5778607/19‑94 (MQ=60)
                                                       tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTG                                >  SRR4302540.370009/18‑94 (MQ=60)
                                                        ttttatagcgatagcaATTATTTACTGAGTCGCGCGCCCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGG                               <  SRR4302540.6756452/78‑1 (MQ=60)
                                                        ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGG                               >  SRR4302540.5011963/17‑94 (MQ=60)
                                                        ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGG                               <  SRR4302540.5716756/78‑1 (MQ=60)
                                                        ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGG                               <  SRR4302540.5687728/78‑1 (MQ=60)
                                                        ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGG                               <  SRR4302540.2310641/78‑1 (MQ=60)
                                                        ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGG                               <  SRR4302540.9110129/78‑1 (MQ=60)
                                                        ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGA                               >  SRR4302540.8321082/17‑94 (MQ=60)
                                                         tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGC                              <  SRR4302540.490851/79‑1 (MQ=60)
                                                         tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGC                              >  SRR4302540.472640/16‑94 (MQ=60)
                                                         tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGC                              <  SRR4302540.1263365/79‑1 (MQ=60)
                                                         TTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATaagcgct                             >  SRR4302540.7110002/1‑87 (MQ=60)
                                                         TTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCG                             <  SRR4302540.5469982/94‑1 (MQ=60)
                                                         TTATAGCGATAGCAATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCG                             <  SRR4302540.8511608/94‑1 (MQ=60)
                                                          ttatagcgatagcaatgATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCG                             >  SRR4302540.9910473/18‑94 (MQ=60)
                                                            atagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTTATCAAAAACAATGCTGGCGGC                           >  SRR4302540.5946664/13‑94 (MQ=60)
                                                            atagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGC                           >  SRR4302540.9751641/13‑94 (MQ=60)
                                                            atagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGC                           >  SRR4302540.4796957/13‑94 (MQ=60)
                                                              agcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAG                         >  SRR4302540.18842/11‑94 (MQ=60)
                                                               gcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGA                        >  SRR4302540.5550008/10‑94 (MQ=60)
                                                                cgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAT                       >  SRR4302540.483600/9‑94 (MQ=60)
                                                                 gatagcaATTATTTACTGAGTGTCGCGACCATCGCCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATT                      >  SRR4302540.3142605/8‑94 (MQ=60)
                                                                 gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATT                      >  SRR4302540.289938/8‑94 (MQ=60)
                                                                 gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATT                      >  SRR4302540.8472118/8‑94 (MQ=60)
                                                                 gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATT                      <  SRR4302540.2583326/87‑1 (MQ=60)
                                                                 gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATT                      >  SRR4302540.289937/8‑94 (MQ=60)
                                                                 gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATT                      <  SRR4302540.7026193/87‑1 (MQ=60)
                                                                  atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTC                     >  SRR4302540.7977661/7‑94 (MQ=60)
                                                                  atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTC                     <  SRR4302540.6529544/88‑1 (MQ=60)
                                                                  atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTC                     >  SRR4302540.8911754/7‑94 (MQ=60)
                                                                   tagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCG                    >  SRR4302540.3179486/6‑94 (MQ=60)
                                                                   tagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCG                    <  SRR4302540.1905422/89‑1 (MQ=60)
                                                                    agcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGA                   >  SRR4302540.3029086/5‑94 (MQ=60)
                                                                    agcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGA                   >  SRR4302540.9114129/5‑94 (MQ=60)
                                                                     gcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAA                  >  SRR4302540.6551212/4‑94 (MQ=60)
                                                                      caATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAG                 >  SRR4302540.2795001/3‑94 (MQ=60)
                                                                      caATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAG                 <  SRR4302540.8481491/92‑1 (MQ=60)
                                                                       AATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGA                <  SRR4302540.3514370/94‑1 (MQ=60)
                                                                       AATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGA                >  SRR4302540.6515634/1‑94 (MQ=60)
                                                                        ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGAC               >  SRR4302540.9799672/1‑94 (MQ=60)
                                                                        ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGAC               >  SRR4302540.5655324/1‑94 (MQ=60)
                                                                        ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGAC               >  SRR4302540.427558/1‑94 (MQ=60)
                                                                        ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGAC               <  SRR4302540.4772855/94‑1 (MQ=60)
                                                                        ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGAC               <  SRR4302540.7363268/94‑1 (MQ=60)
                                                                        ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGAC               <  SRR4302540.4821114/94‑1 (MQ=60)
                                                                        ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGAC               <  SRR4302540.8807793/94‑1 (MQ=60)
                                                                         TTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACC              <  SRR4302540.2192007/94‑1 (MQ=60)
                                                                          TATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCT             >  SRR4302540.2737991/1‑94 (MQ=60)
                                                                          TATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCT             <  SRR4302540.833503/94‑1 (MQ=60)
                                                                          TATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCT             >  SRR4302540.6998286/1‑94 (MQ=60)
                                                                            TTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCA           <  SRR4302540.7060399/94‑1 (MQ=60)
                                                                             TTACTGAGTGTCGCGACCATCCCCGCTTTTATAGTATGCATTCGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCAT          <  SRR4302540.4090344/94‑1 (MQ=60)
                                                                             TTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCAT          >  SRR4302540.6336487/1‑94 (MQ=60)
                                                                             TTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTGTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCAT          <  SRR4302540.817108/94‑1 (MQ=60)
                                                                              TACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATC         <  SRR4302540.3698386/94‑1 (MQ=60)
                                                                              TACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATC         <  SRR4302540.4393701/94‑1 (MQ=60)
                                                                               ACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCA        <  SRR4302540.8257334/94‑1 (MQ=60)
                                                                                CTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAG       <  SRR4302540.2455315/94‑1 (MQ=60)
                                                                                 TGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGT      >  SRR4302540.3325972/1‑94 (MQ=60)
                                                                                 TGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGT      <  SRR4302540.6436321/94‑1 (MQ=60)
                                                                                 TGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGT      <  SRR4302540.5473742/94‑1 (MQ=60)
                                                                                 TGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGT      <  SRR4302540.3844278/94‑1 (MQ=60)
                                                                                 TGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGT      <  SRR4302540.2996493/94‑1 (MQ=60)
                                                                                  GAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTG     >  SRR4302540.5131304/1‑94 (MQ=60)
                                                                                   AGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGA    >  SRR4302540.9938766/1‑94 (MQ=60)
                                                                                   AGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGA    >  SRR4302540.3256621/1‑94 (MQ=60)
                                                                                   AGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGA    >  SRR4302540.3256620/1‑94 (MQ=60)
                                                                                   AGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGA    >  SRR4302540.8685759/1‑94 (MQ=60)
                                                                                    GTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGAC   <  SRR4302540.5919403/94‑1 (MQ=60)
                                                                                    GTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGAC   <  SRR4302540.6757705/94‑1 (MQ=60)
                                                                                     TGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACT  <  SRR4302540.6717140/94‑1 (MQ=60)
                                                                                     TGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACT  >  SRR4302540.3705601/1‑94 (MQ=60)
                                                                                     |                                                                                             
GACCTATCACTGCATAAATAATGTGATGCCGGGATGGTTT‑‑‑‑‑‑‑‑CCGCATCTTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGACT  >  NC_000913/4474809‑4474975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: