Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,474,882 |
C→T |
T331T (ACG→ACA) |
argI ← |
ornithine carbamoyltransferase 1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,474,882 | 0 | C | T | 99.6%
| 809.3
/ NA
| 221 | T331T (ACG→ACA) | argI | ornithine carbamoyltransferase 1 |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (134/86); minor base G (1/0); total (135/86) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 227 total aligned reads displayed.
CTTTGGGTGGAAGAATAGACCTATCACTGCATAAATAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGT > NC_000913/4474792‑4474971
|
agaatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAgtgt < 1:2546745‑M2/16‑1 (MQ=255)
agaatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAgtgt > 2:3480821‑M2/78‑93 (MQ=255)
aatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTcg > 2:4361207‑M2/76‑93 (MQ=255)
aatagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTcg > 2:2350620‑M2/76‑93 (MQ=255)
tagacctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTcgcg > 2:4866739‑M2/74‑93 (MQ=255)
acctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGAcc < 1:3790670‑M2/23‑1 (MQ=255)
cctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCa < 2:4465765‑M2/24‑1 (MQ=255)
ctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCAt < 1:1087848‑M2/25‑1 (MQ=255)
ctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCAt > 2:4434432‑M2/69‑93 (MQ=255)
ctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCAt > 2:1722333‑M2/69‑93 (MQ=255)
ctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCAt > 1:5598209‑M2/69‑93 (MQ=255)
ctatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCAt < 2:4487617‑M2/25‑1 (MQ=255)
tatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATc > 2:5918926‑M2/68‑93 (MQ=255)
tatcactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATc > 2:210086‑M2/68‑93 (MQ=255)
cactgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCAcc > 2:3187548‑M2/65‑93 (MQ=255)
actgcatagaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCg > 2:6136611‑M2/64‑93 (MQ=255)
tgcataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCt > 2:4985706‑M2/62‑93 (MQ=255)
cataaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCttt > 2:5588949‑M2/60‑93 (MQ=255)
aaaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGAt > 2:1060053‑M2/57‑93 (MQ=255)
aaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATa < 2:5440614‑M2/38‑1 (MQ=255)
aaataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATa > 2:3885084‑M2/56‑93 (MQ=255)
aataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAg > 1:210172‑M2/55‑93 (MQ=255)
aataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAg > 1:6259286‑M2/55‑93 (MQ=255)
ataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGt > 1:316774‑M2/54‑93 (MQ=255)
ataatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGt < 2:1955597‑M2/40‑1 (MQ=255)
taatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTa > 1:1160354‑M2/53‑93 (MQ=255)
taatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTa > 2:3005754‑M2/53‑93 (MQ=255)
taatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTa < 2:797393‑M2/41‑1 (MQ=255)
aatgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTAt > 1:4344377‑M2/52‑93 (MQ=255)
atgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATg < 2:4050661‑M2/43‑1 (MQ=255)
atgtgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATg > 2:736032‑M2/51‑93 (MQ=255)
gtgatgccgggatggtttgtatttcacggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCa < 1:6088208‑M2/45‑1 (MQ=255)
tgatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCAt < 2:1908403‑M2/46‑1 (MQ=255)
gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATa < 1:4885049‑M2/47‑1 (MQ=255)
gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATa < 1:3368564‑M2/47‑1 (MQ=255)
tgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACg < 2:5524864‑M2/49‑1 (MQ=255)
cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtt < 2:5624626‑M2/52‑1 (MQ=255)
cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtt < 1:6012015‑M2/52‑1 (MQ=255)
gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGttt > 1:1228655‑M2/41‑93 (MQ=255)
gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGttt > 1:5237013‑M2/41‑93 (MQ=255)
gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGttt > 2:3683042‑M2/41‑93 (MQ=255)
ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtttt > 2:4243590‑M2/40‑93 (MQ=255)
ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtttt > 2:5784915‑M2/40‑93 (MQ=255)
ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGtttt > 1:4549123‑M2/40‑93 (MQ=255)
gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTc > 1:2725891‑M2/39‑93 (MQ=255)
atggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTcc < 2:5177436‑M2/56‑1 (MQ=255)
tgtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGc < 1:4393318‑M2/58‑1 (MQ=255)
ggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGc < 2:2812936‑M2/58‑1 (MQ=255)
ggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGc > 2:5877042‑M2/36‑93 (MQ=255)
ggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGc > 1:262637‑M2/36‑93 (MQ=255)
tttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCt > 1:3632683‑M2/34‑93 (MQ=255)
tttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCAACCATAACCGCTTTGATAGTATGCATACGGTTTTCCCCCt > 2:240509‑M2/34‑93 (MQ=255)
tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGa > 1:5935175‑M2/32‑93 (MQ=255)
tgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGa > 2:5369096‑M2/32‑93 (MQ=255)
gtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGAt < 1:4944421‑M2/63‑1 (MQ=255)
gtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGAt < 1:1384488‑M2/63‑1 (MQ=255)
tatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATc > 2:3085291‑M2/30‑93 (MQ=255)
atttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCa > 2:5367747‑M2/29‑93 (MQ=255)
atttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCa > 1:51692‑M2/29‑93 (MQ=255)
cccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCaaaaa < 2:3314005‑M2/69‑1 (MQ=255)
cccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCaaaaa < 1:5973664‑M2/69‑1 (MQ=255)
cggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACa > 1:1603927‑M2/23‑93 (MQ=255)
ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACaa < 1:3947818‑M2/72‑1 (MQ=255)
gcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAt > 2:942401‑M2/21‑93 (MQ=255)
gcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAt < 1:1995795‑M2/73‑1 (MQ=255)
catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATg < 1:1281815‑M2/74‑1 (MQ=255)
catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATg > 1:4215792‑M2/20‑93 (MQ=255)
catctttaaagcgatagcaCTTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATg > 2:6164621‑M2/20‑93 (MQ=255)
atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGc > 1:5327278‑M2/19‑93 (MQ=255)
atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGc > 2:1323701‑M2/19‑93 (MQ=255)
tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt > 1:1721539‑M2/18‑93 (MQ=255)
tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt > 1:3091835‑M2/18‑93 (MQ=255)
tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt < 2:4071390‑M2/76‑1 (MQ=255)
tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt < 2:3132214‑M2/76‑1 (MQ=255)
tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCt > 1:6173446‑M2/18‑93 (MQ=255)
tctttatagcgatagcaATTATTTACTGAGTGTCGAGACCATCAGCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAACACAATGCt > 1:2810576‑M2/18‑93 (MQ=255)
ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTg < 1:1817171‑M2/77‑1 (MQ=255)
ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTg < 1:2963086‑M2/77‑1 (MQ=255)
tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTgg < 2:4716995‑M2/78‑1 (MQ=255)
tagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTggcggc < 1:3179053‑M2/82‑1 (MQ=255)
cgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGa < 2:1859422‑M2/85‑1 (MQ=255)
cgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGa < 2:1342237‑M2/85‑1 (MQ=255)
gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAt > 1:783767‑M2/8‑93 (MQ=255)
gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAt < 2:1524847‑M2/86‑1 (MQ=255)
atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAtt > 1:857029‑M2/7‑93 (MQ=255)
atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAtt < 1:1550055‑M2/87‑1 (MQ=255)
tagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTc > 2:3826385‑M2/6‑93 (MQ=255)
caATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGaa < 1:992369‑M2/91‑1 (MQ=255)
aATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAg < 1:610546‑M2/92‑1 (MQ=255)
aATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAg > 1:1400231‑M2/2‑93 (MQ=255)
aATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAg > 2:5157779‑M2/2‑93 (MQ=255)
tattTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGAcc > 1:5100750/1‑93 (MQ=255)
attTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCt > 2:2172297/1‑93 (MQ=255)
tttACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtc > 2:4322881/1‑93 (MQ=255)
tACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtcat < 2:2872585/93‑1 (MQ=255)
aCTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtcatc < 1:500574/93‑1 (MQ=255)
aCTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtcatc > 1:2375152/1‑93 (MQ=255)
aCTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCtcatc > 2:4522243/1‑93 (MQ=255)
tGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAg < 2:3987465/93‑1 (MQ=255)
gAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGt < 1:2914406/93‑1 (MQ=255)
|
CTTTGGGTGGAAGAATAGACCTATCACTGCATAAATAATGTGATGCCGGGATGGTTTCCGCATCTTATAGCGATCAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGT > NC_000913/4474792‑4474971
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCTATCACTGCAT‑AAATAATGTGATGCCGGGATGGTTT‑‑‑‑‑‑‑‑CCGCATC‑TTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGA > NC_000913/4474810‑4474973
|
ACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCA < SRR4302533.3813881/94‑1 (MQ=19)
ACCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCA > SRR4302533.1633318/1‑94 (MQ=19)
CCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCAT > SRR4302533.3187978/1‑94 (MQ=18)
CCTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCAT > SRR4302533.5632033/1‑94 (MQ=18)
CTATCACTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATC < SRR4302533.1094256/94‑1 (MQ=16)
CTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCT > SRR4302533.2088223/1‑94 (MQ=16)
CTGCATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCT > SRR4302533.1197422/1‑94 (MQ=16)
CATAAAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTG > SRR4302533.5706532/1‑94 (MQ=21)
AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG < SRR4302533.6133200/94‑1 (MQ=28)
AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG > SRR4302533.211499/1‑94 (MQ=28)
AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG < SRR4302533.6081766/94‑1 (MQ=28)
AAATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAG > SRR4302533.6296712/1‑94 (MQ=28)
AATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGT > SRR4302533.318713/1‑94 (MQ=28)
ATAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTA > SRR4302533.1167317/1‑94 (MQ=28)
TAATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTAT > SRR4302533.4370559/1‑94 (MQ=28)
ATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGC < SRR4302533.2694274/94‑1 (MQ=32)
ATGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGC > SRR4302533.6047079/1‑94 (MQ=32)
TGTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCA < SRR4302533.6234426/94‑1 (MQ=34)
GTGATGCCGGGATGGTTTGTATTTCCCGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCAT < SRR4302533.4917826/94‑1 (MQ=36)
GTGATGCCGGGATGGTTTGTATTTCACGGCATCTTTATAGCGATAGCA‑ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCAT < SRR4302533.6125012/94‑1 (MQ=36)
gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATAC < SRR4302533.731202/48‑1 (MQ=60)
gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATAC < SRR4302533.4914644/48‑1 (MQ=60)
gatgccgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATAC < SRR4302533.3389369/48‑1 (MQ=60)
cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT > SRR4302533.5746893/42‑94 (MQ=60)
cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT > SRR4302533.1236011/42‑94 (MQ=60)
cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT > SRR4302533.5344976/42‑94 (MQ=60)
cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT > SRR4302533.5268501/42‑94 (MQ=60)
cgggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTT < SRR4302533.6048437/53‑1 (MQ=60)
gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTT < SRR4302533.1258012/54‑1 (MQ=60)
gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTT < SRR4302533.3747887/54‑1 (MQ=60)
gggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTT > SRR4302533.4576708/41‑94 (MQ=60)
ggatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTC > SRR4302533.2742611/40‑94 (MQ=60)
gatggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCC < SRR4302533.6093274/56‑1 (MQ=60)
tggtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGC > SRR4302533.264228/37‑94 (MQ=60)
tgtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCC < SRR4302533.4419840/59‑1 (MQ=60)
gtttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCT > SRR4302533.3655031/35‑94 (MQ=60)
ttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGA > SRR4302533.6175918/33‑94 (MQ=60)
ttgtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGA > SRR4302533.5971057/33‑94 (MQ=60)
gtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATC < SRR4302533.1688765/64‑1 (MQ=60)
gtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATC < SRR4302533.1392818/64‑1 (MQ=60)
gtatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATC < SRR4302533.4974349/64‑1 (MQ=60)
tatttcccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCA > SRR4302533.52042/30‑94 (MQ=60)
cccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAAC < SRR4302533.6009820/70‑1 (MQ=60)
cccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAAC > SRR4302533.93705/25‑94 (MQ=60)
cccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAAA > SRR4302533.3401401/25‑94 (MQ=60)
ccggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACA > SRR4302533.1613640/24‑94 (MQ=60)
ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAT < SRR4302533.1531144/73‑1 (MQ=60)
ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAT < SRR4302533.254615/73‑1 (MQ=60)
ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAT < SRR4302533.3971894/73‑1 (MQ=60)
ggcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAAT > SRR4302533.1804880/22‑94 (MQ=60)
gcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATG < SRR4302533.2008054/74‑1 (MQ=60)
gcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATG > SRR4302533.4241295/21‑94 (MQ=60)
gcatctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATG > SRR4302533.4356152/21‑94 (MQ=60)
catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGC > SRR4302533.2304223/20‑94 (MQ=60)
catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGC > SRR4302533.2641781/20‑94 (MQ=60)
catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGC > SRR4302533.5359203/20‑94 (MQ=60)
catctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGC < SRR4302533.1289529/75‑1 (MQ=60)
atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT > SRR4302533.5158322/19‑94 (MQ=60)
atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT > SRR4302533.1731980/19‑94 (MQ=60)
atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT > SRR4302533.3110846/19‑94 (MQ=60)
atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT > SRR4302533.2827871/19‑94 (MQ=60)
atctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCT > SRR4302533.6210543/19‑94 (MQ=60)
atctttatagcgatagcaATTATTTACTGAGTGTCGAGACCATCAGCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAACACAATGCT > SRR4302533.2827872/19‑94 (MQ=60)
tctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTG > SRR4302533.4053865/18‑94 (MQ=60)
ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGG > SRR4302533.4652922/17‑94 (MQ=60)
ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGG < SRR4302533.4530782/78‑1 (MQ=60)
ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGG < SRR4302533.1828264/78‑1 (MQ=60)
ctttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGG < SRR4302533.2981200/78‑1 (MQ=60)
tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGC > SRR4302533.3093110/16‑94 (MQ=60)
tttatagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGC > SRR4302533.6328176/16‑94 (MQ=60)
tagcgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCA < SRR4302533.3198608/83‑1 (MQ=60)
cgatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGAT > SRR4302533.788377/9‑94 (MQ=60)
gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATT > SRR4302533.862048/8‑94 (MQ=60)
gatagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATT < SRR4302533.2131909/87‑1 (MQ=60)
atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTC < SRR4302533.1559394/88‑1 (MQ=60)
atagcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTC > SRR4302533.1304877/7‑94 (MQ=60)
agcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGA > SRR4302533.1568656/5‑94 (MQ=60)
agcaATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGA > SRR4302533.5202089/5‑94 (MQ=60)
caATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAG < SRR4302533.998171/92‑1 (MQ=60)
caATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAG > SRR4302533.1408671/3‑94 (MQ=60)
AATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGA > SRR4302533.3907826/1‑94 (MQ=60)
AATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGA < SRR4302533.614135/94‑1 (MQ=60)
ATTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGAC < SRR4302533.805723/94‑1 (MQ=60)
TTATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACC > SRR4302533.5131562/1‑94 (MQ=60)
TATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAATAATAATGCTGGCGGCAGATTAGAAGAGCT > SRR4302533.5193315/1‑94 (MQ=60)
TATTTACTGAGGGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTGTTCCGCCTGATCAAAAACAATGCTAGCGGCAGATTCGAAGACCT > SRR4302533.5971358/1‑94 (MQ=60)
ATTTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTC < SRR4302533.1143511/94‑1 (MQ=60)
TTACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCAT > SRR4302533.2908668/1‑94 (MQ=60)
TACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATC < SRR4302533.3052249/94‑1 (MQ=60)
TACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATC > SRR4302533.2389849/1‑94 (MQ=60)
ACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCATAAACAATGCTGGCGGCAGATTCGAAGACCTCATCA > SRR4302533.1380106/1‑94 (MQ=60)
ACTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCA < SRR4302533.503552/94‑1 (MQ=60)
CTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAG > SRR4302533.2970049/1‑94 (MQ=60)
CTGAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAG < SRR4302533.4408007/94‑1 (MQ=60)
GAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTG < SRR4302533.2932284/94‑1 (MQ=60)
GAGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTG > SRR4302533.3535684/1‑94 (MQ=60)
AGTGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGA > SRR4302533.2933897/1‑94 (MQ=60)
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ACCTATCACTGCAT‑AAATAATGTGATGCCGGGATGGTTT‑‑‑‑‑‑‑‑CCGCATC‑TTATAGCGAT‑‑CAGATTATTTACTGAGCGTCGCGACCATCACCGCTTTGATAGTATGCATACGGTTTTCCGCCTGATCAAAAACAATGCTGGCGGCAGATTCGAAGACCTCATCAGTGA > NC_000913/4474810‑4474973
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
